mRNA_H-paniculata_contig17629.4193.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig17629.4193.1 vs. uniprot
Match: D8LSZ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSZ3_ECTSI) HSP 1 Score: 241 bits (616), Expect = 7.080e-77 Identity = 119/132 (90.15%), Postives = 125/132 (94.70%), Query Frame = 1
Query: 1 VEDPYRFLATQGTLDMIEAAPDKVLPVIPQLILPTKTALNTRESRIICPTLKILQQMILLSPMIGQALVPYYRQLLPVFNLFRGKNHNMGDSIDYNQRSRTNVGELIMETLEIMEQFGGPDAFINIKYMVPT 396
VEDPYRFLA QGT+DMIE APDKVLPVIPQLILP KTALNTRE RIICPTLKILQQMILLSPMIGQALVPYYRQLLP+FNLFRG N NMGD+IDYNQRSR NVG+LIMETLE+MEQFGGPDAFINIKYM+PT
Sbjct: 257 VEDPYRFLAVQGTVDMIEGAPDKVLPVIPQLILPMKTALNTREPRIICPTLKILQQMILLSPMIGQALVPYYRQLLPMFNLFRGMNSNMGDAIDYNQRSRINVGKLIMETLEVMEQFGGPDAFINIKYMIPT 388
BLAST of mRNA_H-paniculata_contig17629.4193.1 vs. uniprot
Match: A0A836C8N9_9STRA (Parkin co-regulated protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8N9_9STRA) HSP 1 Score: 221 bits (563), Expect = 1.750e-69 Identity = 106/132 (80.30%), Postives = 119/132 (90.15%), Query Frame = 1
Query: 1 VEDPYRFLATQGTLDMIEAAPDKVLPVIPQLILPTKTALNTRESRIICPTLKILQQMILLSPMIGQALVPYYRQLLPVFNLFRGKNHNMGDSIDYNQRSRTNVGELIMETLEIMEQFGGPDAFINIKYMVPT 396
VEDP+RFLA QGTLDM+EAAPDKVLPVIPQLILP K+ALNTR IICP LKILQQMILL+ +GQALVPYYRQ+LP+FNLF+ KN N+GD IDY QRSR NVGELI+ETLE+MEQFGGPDAFINIKY++PT
Sbjct: 208 VEDPFRFLAVQGTLDMVEAAPDKVLPVIPQLILPLKSALNTRAPTIICPVLKILQQMILLNAAVGQALVPYYRQILPIFNLFKAKNANLGDGIDYGQRSRVNVGELILETLELMEQFGGPDAFINIKYLIPT 339
BLAST of mRNA_H-paniculata_contig17629.4193.1 vs. uniprot
Match: A0A7S3Y211_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y211_HETAK) HSP 1 Score: 204 bits (518), Expect = 1.490e-64 Identity = 97/131 (74.05%), Postives = 112/131 (85.50%), Query Frame = 1
Query: 4 EDPYRFLATQGTLDMIEAAPDKVLPVIPQLILPTKTALNTRESRIICPTLKILQQMILLSPMIGQALVPYYRQLLPVFNLFRGKNHNMGDSIDYNQRSRTNVGELIMETLEIMEQFGGPDAFINIKYMVPT 396
+DPYRFLA QGTLDM+ AP+KVLPVIPQ+ILP K ALNTR IICP LK+LQQM+L +P++GQALVPYYRQLLPVFNL+R ++ N+GD I YNQR RTNV ELI ETLEI+E GGPDAFINIKYM+PT
Sbjct: 66 DDPYRFLAVQGTLDMVLVAPEKVLPVIPQIILPLKAALNTRHPVIICPALKVLQQMVLQNPLVGQALVPYYRQLLPVFNLYRARDENLGDGIAYNQRQRTNVAELIRETLEILEVHGGPDAFINIKYMIPT 196
BLAST of mRNA_H-paniculata_contig17629.4193.1 vs. uniprot
Match: A0A6H5JQT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQT2_9PHAE) HSP 1 Score: 180 bits (457), Expect = 1.230e-56 Identity = 88/97 (90.72%), Postives = 93/97 (95.88%), Query Frame = 1
Query: 106 KTALNTRESRIICPTLKILQQMILLSPMIGQALVPYYRQLLPVFNLFRGKNHNMGDSIDYNQRSRTNVGELIMETLEIMEQFGGPDAFINIKYMVPT 396
KTALNTRE RIICPTLKILQQMILLSPMIGQALVPYYRQLLP+FNLFRG N N+GD+IDYNQRSR NVGELIMETLE+MEQFGGPDAFINIKYM+PT
Sbjct: 2 KTALNTREPRIICPTLKILQQMILLSPMIGQALVPYYRQLLPMFNLFRGMNSNIGDAIDYNQRSRINVGELIMETLEVMEQFGGPDAFINIKYMIPT 98
BLAST of mRNA_H-paniculata_contig17629.4193.1 vs. uniprot
Match: A0A7S0LVP2_9EUKA (Hypothetical protein n=2 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LVP2_9EUKA) HSP 1 Score: 181 bits (458), Expect = 1.220e-55 Identity = 83/131 (63.36%), Postives = 104/131 (79.39%), Query Frame = 1
Query: 4 EDPYRFLATQGTLDMIEAAPDKVLPVIPQLILPTKTALNTRESRIICPTLKILQQMILLSPMIGQALVPYYRQLLPVFNLFRGKNHNMGDSIDYNQRSRTNVGELIMETLEIMEQFGGPDAFINIKYMVPT 396
E+PYRFLA QG DM+E K+LPVIPQLI+P KTALNTR+S +IC LK+LQ M++ MIG+ALVPYYRQ+LP+FN+F+ N N+GD IDY Q+ R +G+LI+ETLE+ E GG DAFINIKYM+PT
Sbjct: 50 EEPYRFLAVQGVFDMLEHGGSKILPVIPQLIIPIKTALNTRDSDVICTVLKVLQSMVVSGEMIGEALVPYYRQILPIFNIFKNSNKNLGDGIDYGQQKRRTLGDLIIETLEMFETHGGEDAFINIKYMIPT 180
BLAST of mRNA_H-paniculata_contig17629.4193.1 vs. uniprot
Match: A0A6T7Z7R8_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A6T7Z7R8_9EUKA) HSP 1 Score: 184 bits (467), Expect = 2.060e-55 Identity = 86/131 (65.65%), Postives = 107/131 (81.68%), Query Frame = 1
Query: 4 EDPYRFLATQGTLDMIEAAPDKVLPVIPQLILPTKTALNTRESRIICPTLKILQQMILLSPMIGQALVPYYRQLLPVFNLFRGKNHNMGDSIDYNQRSRTNVGELIMETLEIMEQFGGPDAFINIKYMVPT 396
E+PYRFLA QG DM+E K+LPVIPQLI+P KTALNTR+ IIC LK+LQQM++ MIG+ALVPYYRQ+LP+FNLF+ KN+N+GD IDY+Q+ R +G+LI+ETLE+ E GG DAFINIKYM+PT
Sbjct: 174 EEPYRFLAVQGVFDMLENGGSKILPVIPQLIIPIKTALNTRDPPIICTVLKVLQQMVVSGEMIGEALVPYYRQILPIFNLFKSKNNNLGDGIDYSQQKRKTLGDLIVETLEMFEIHGGEDAFINIKYMIPT 304
BLAST of mRNA_H-paniculata_contig17629.4193.1 vs. uniprot
Match: L1JFI8_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JFI8_GUITC) HSP 1 Score: 180 bits (456), Expect = 3.680e-55 Identity = 87/131 (66.41%), Postives = 104/131 (79.39%), Query Frame = 1
Query: 4 EDPYRFLATQGTLDMIEAAPDKVLPVIPQLILPTKTALNTRESRIICPTLKILQQMILLSPMIGQALVPYYRQLLPVFNLFRGKNHNMGDSIDYNQRSRTNVGELIMETLEIMEQFGGPDAFINIKYMVPT 396
E+PYRFLA QGT DM+E K+LPVIPQLI+P KTALNTR+ +I LK+LQQ+++ MIG+ALVPYYRQLLP+FNLF+ N N+GD I YNQR R N+G+LI ETLE+ E GG DAFINIKYMVPT
Sbjct: 65 EEPYRFLAIQGTFDMLEHGGGKILPVIPQLIIPFKTALNTRDPAVIVVVLKVLQQLVISGDMIGEALVPYYRQLLPIFNLFKNNNVNVGDKIVYNQRKRVNLGDLIQETLELFEANGGEDAFINIKYMVPT 195
BLAST of mRNA_H-paniculata_contig17629.4193.1 vs. uniprot
Match: A0A813JV63_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JV63_POLGL) HSP 1 Score: 178 bits (452), Expect = 4.660e-55 Identity = 85/134 (63.43%), Postives = 108/134 (80.60%), Query Frame = 1
Query: 4 EDPYRFLATQGTLDMIEAAPDKVLPVIPQLILPTKTALNTRESRIICPTLKILQQMILLSPMIGQALVPYYRQLLPVFNLFRGKN---HNMGDSIDYNQRSRTNVGELIMETLEIMEQFGGPDAFINIKYMVPT 396
EDPYRF+A G DM+E DK+LPV+PQLI+P KTALNTR+ +I+C +KILQQ++L MIG+ALVPYYRQ+LPVF++FR KN MGD ++Y+QR R N+G+LI ETL+I+EQ GG DAFINIKYM+PT
Sbjct: 23 EDPYRFMAVTGVYDMLEKGGDKILPVVPQLIIPLKTALNTRDPQIMCTCMKILQQLVLSGDMIGEALVPYYRQILPVFSIFRAKNVPVSAMGDLMEYSQRKRVNLGDLIAETLQILEQHGGEDAFINIKYMIPT 156
BLAST of mRNA_H-paniculata_contig17629.4193.1 vs. uniprot
Match: A0A1R2C2S2_9CILI (Uncharacterized protein n=3 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2C2S2_9CILI) HSP 1 Score: 183 bits (464), Expect = 4.960e-55 Identity = 89/130 (68.46%), Postives = 105/130 (80.77%), Query Frame = 1
Query: 7 DPYRFLATQGTLDMIEAAPDKVLPVIPQLILPTKTALNTRESRIICPTLKILQQMILLSPMIGQALVPYYRQLLPVFNLFRGKNHNMGDSIDYNQRSRTNVGELIMETLEIMEQFGGPDAFINIKYMVPT 396
DPYRFLA QG DM+E +KVLPVIPQLI+P KTALNTR+ IIC LKILQ+++ + MIG+ALVPYYRQ+LPVFN+F+ KN N GD IDY QR R N+GELI ETLE++E GG DAFINIKYM+PT
Sbjct: 169 DPYRFLAIQGVFDMLEHGGNKVLPVIPQLIIPIKTALNTRDPDIICVILKILQKLVTSADMIGEALVPYYRQILPVFNIFKQKNANYGDKIDYAQRKRQNIGELIQETLELLETTGGEDAFINIKYMIPT 298
BLAST of mRNA_H-paniculata_contig17629.4193.1 vs. uniprot
Match: A0A1R2BM68_9CILI (Uncharacterized protein n=2 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BM68_9CILI) HSP 1 Score: 182 bits (463), Expect = 7.020e-55 Identity = 88/130 (67.69%), Postives = 105/130 (80.77%), Query Frame = 1
Query: 7 DPYRFLATQGTLDMIEAAPDKVLPVIPQLILPTKTALNTRESRIICPTLKILQQMILLSPMIGQALVPYYRQLLPVFNLFRGKNHNMGDSIDYNQRSRTNVGELIMETLEIMEQFGGPDAFINIKYMVPT 396
DPYRFLA QG DM+E +KVLPVIPQLI+P KTALNTR+ IIC LKILQ+++ + MIG+ALVPYYRQ+LPVFN+F+ KN N GD IDY+QR N+GELI ETLE++E GG DAFINIKYM+PT
Sbjct: 169 DPYRFLAIQGVFDMLEHGGNKVLPVIPQLIIPVKTALNTRDPDIICVILKILQKLVTSADMIGEALVPYYRQILPVFNIFKHKNANYGDKIDYSQRKHQNIGELIQETLELLETTGGEDAFINIKYMIPT 298 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17629.4193.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig17629.4193.1 >prot_H-paniculata_contig17629.4193.1 ID=prot_H-paniculata_contig17629.4193.1|Name=mRNA_H-paniculata_contig17629.4193.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=133bp VEDPYRFLATQGTLDMIEAAPDKVLPVIPQLILPTKTALNTRESRIICPTback to top mRNA from alignment at H-paniculata_contig17629:3428..5174- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig17629.4193.1 ID=mRNA_H-paniculata_contig17629.4193.1|Name=mRNA_H-paniculata_contig17629.4193.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1747bp|location=Sequence derived from alignment at H-paniculata_contig17629:3428..5174- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig17629:3428..5174- >mRNA_H-paniculata_contig17629.4193.1 ID=mRNA_H-paniculata_contig17629.4193.1|Name=mRNA_H-paniculata_contig17629.4193.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=798bp|location=Sequence derived from alignment at H-paniculata_contig17629:3428..5174- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |