|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1735 |
| Cds size | 1521 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig17557.4165.1 >prot_H-paniculata_contig17557.4165.1 ID=prot_H-paniculata_contig17557.4165.1|Name=mRNA_H-paniculata_contig17557.4165.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=507bp
MVSQKRVRCSMNKCYRRAGYGFAGQAGKFCVEHQVEGMVKVSEVYRVHAV
RPTASVLPPPVVGAAADPAGDHNNTDIHQAPSISQSGGNVTTPWSDANGA
GGAEKAGVDVGDGDANGRLGHGDQLPTAVTSWPPSPPSSTSRPTVYQPGA
LPAATAAAVATDSVSDMQASPDTSNHATAPGDNGGASDSGTSVGNNSSAQ
ATATAAAAAAAAAVAVAVQQHPNSAPGRPQHAPEVHLPQHNEDPHNNRGG
QYAPHTAAAAAAAAASTPVSQQARDGEETEDESDGPAVRGARGGGAAAGR
NRSEQQQQQQDPVEGQSSLMLQRGTRPTGFPQHQLLNSSAFVRLAPSAAA
GAAVAGHNGNVLAQQQSSLPPAAAPAAPQARMQRGVHRNNTNLEVVTGSS
ATTPAHSTTKPEVQEQDHHRDRTTHRYNDQEQIPYVADQDRPSPQHGSGS
GGGGGGGGISDSTDCRDEHQAIVMEQRIGEYRTTVPPVPLPPSLSPPLPE
RGERVG* back to topmRNA from alignment at H-paniculata_contig17557:84..5044- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig17557.4165.1 ID=mRNA_H-paniculata_contig17557.4165.1|Name=mRNA_H-paniculata_contig17557.4165.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4961bp|location=Sequence derived from alignment at H-paniculata_contig17557:84..5044- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGCAGGATGCACGGTGCAGCCGGTGTATGGATATCCTTCTGCCACCGAA
GGCGAGAAATTTTTGCCGTTTTTTTGCGCGTCCCATAAGAGGGCGGGCAT
GGTGAGCCAGAAGCGCGTTCGATGCTCGATGAACAAATGTTACCGGAGGG
CTGGCTACGGATTCGCCGGGCAAGCAGGAAAATTCTGCGTCGAGCATCAG
GCAAGCTGTCTATCTTGGCAGAAAATAGTGATATTGTGGCGGCATTTTGT
TGTAAAAAAAATGCCGTTCAAGCTGGTCTCAGACAACAAAAATGGGAACC
CACAGAGTCCTCGACCTGGTTATGTTCTCCCCTTTTTTTTCAAGGTTGTA
GAGAATGGCAAAAAAAAGCGATTGTAGGTATCGAGACCAAAAAACAAAAT
TGTATATAGGCTCGCTCGTTTTTTCTGTCTCTAATTTCAATATATTTGAA
TTCTCTCATCATGGGTAATCAAAGTACAAACAATTAGTACATCGCTCGTT
CCAGAGAAAGACATGAAGATGAGCGAGCCTTTAGTTCTTCGTGATTTCCA
TACCTGCAGTTGTGTTTTTTTGCCGTGCTTCATAATTCGAAAAACCCTAA
GGGAAAAAGGCTGAAATAAGTAATAAATTCGTATCAGAAACACTTCGGGT
GTGTTATAGGTCATAATTCAAAGCCCTGAAAGTATGTTTTCTGGAGATGT
GGGGTAGATATAAAACTGGGAACAGCATCATATTGTTGGCCTTAACGCAG
AGCATCTTCCTGTATGCCCTTGTTCGCCGTTCTGCAAGTCTCATCCTACA
TATTGATAAAAAGCAAAAAAGGACATGATACTTCCAGAGAGATCAGGTAC
TACACATGCAGATTGTACCCGACGGACGGCGACCTGCATCCGCCTTCCGA
CAGTGCGCAGACTAGGATCCGGCGCACTTGGAACAGTTATCAACGAGAGT
CGTGAAACGAAACAGAACGTACACGTATAAATGACCAACGAAACAAGATA
GTTTGGTTAGCGAAGACAAGTAAGCGTTGGCTGTATCTCGCTTGCATTCA
TGAAAAAGATTGTACATACTCCACGCACTATGCTTGCAGCAGCAGTGCAC
GCTGCAACTAGCAGCGTGTATACGTCTAGCTTCATGTGGTGCCCGGTGCA
TAGTAATAGTCTGCAAGCGCTTGGTGTGGATGTGGTGGGATTGGGTTGTG
AGCGGGTAGGGGTCGGGGGCGCACAATTACTAGTAAAAATGTAGTATTTG
ATATATATTTTTAACAAATCGTTTATGAAGCGGCTGCGTTCGGCCCGGTG
GGTATGATTACTTGTGTTTTAGCGCAAACAAGGTGTGAGCTGAATCAGGC
CACCTCGTTGTGTTCGTCTTGTCTGCAGCGTCAAGTAGATGTGTTCAATG
GTGAATTTTCTCGTCGTGCATGACAAGAACTAAAAAATAGGGAAGAGGAA
TGTTTTTTTTTCGTGAGACCAGCCTGTACTGTGTGTTTTTGTTGTGGTAG
GACGAGTTCTATTTTTTCACTGCGTGTGTGCAGGTTTATTCCAAGCCTCA
CGGCCAACTGCTTCACACAGAATTGTCGGGGTTTAAGCCCCCTCGAAAAC
ATGCAGGGTTGTAGATTTGCAAGAAAACATGTGATTACGGATGGTTTAAG
TGCGCCTTCAAATCATGACGTGAAATAGTTGTGGTGCAGAGGAAGATTGC
TTTTATTCCATGACGCTTATACAAGAGGTGTCAAAGAGGGTAGGATAGGG
TAGGGGAGACTACGAAAAATTCTGAATCTGCATCACGGATAGAGGCCTTC
CTGTACCGAAATAACTCGGCTTCTGATGACGAGAGTGTCACATGTGGTTG
CTAGTGTTGATTTGTTACGGAGCCTATAAACTGTCCCCATCTCTATTGGA
ATTTTGGCGAACGTTCCCCGCACCCACCGCATTAATCCGGCAAAAATGTT
GATGATCTTGTGTTCCACTCCGGAGTCTGGCCCCCCTCTTCGCGCCGTTG
CCCGCGCCGCCCCGCGTAGCTGTTGCTATGTTCTGTTCTGTTTTATCCGA
GCTGGAAAACTTCCCTAGACGATGTGTTAAGTGTTATTGGCAGCAATGCT
GGCCAACAATGGACTGATGGCGAAGCGAGGCCCCATTTCCCGTCGATGCC
TCTATGGTTGTGTGGTGCTTATGAGTATATTGGTGTCATGGGAGGTCCGC
CGCATAATCCTCAGCATAATGTTATTCGGTGTACGTGCATGTTTACAAAA
AATACTGTAAATACGGTGGACTCTCAAAGTGAGTCGACCGACCGTTTGCT
AGTGGTTCGCAAATTTGGTGTGTGCCTGCCTGTGTCAGTGTTGGTGCTAC
TCTGGTCCCCATTTTTTACCTACTACTCTCGATGTTGTGGTAGAAGGAAA
GAAGGTGAGTCCAGTTGGTCGCTTGCTCGAGCTGGTCTGTTTCTGTTGAT
GAGGATTTCCCCCATTGGGTTTCACCGGGCATTTTCCGAACGTGAATGAC
ATGTTATTTTGTGGAACATGTAACCCTAGGAGCATGTTCCCTCTTTTCCC
CCTTCATGATAATGTGTTTGTGGGCTTGCTTTCTCCTTTGTCGCGTGTAG
TGTCATTTTTGTGCGTTCTATATCTCTAGCGCTATGGTGAAAATATTGCA
TCCCCCAGATAAATACGAATACTTGCAAATGATTTTCACAAAAATAACGG
AAAGTATTCGTCTAAGTTTCAGAATGATGGGACACATGGAATAAAGTATC
CACCCCCGGTCGATTCGATTTAGGACTATTGTTAGCAGTCGTGGATGATC
CGGGGCACATATGACACACGAGCTCATTTGAATCTCAGGCGAGCACTTTC
ATTTGTTTTGTGGAAACCCTTTTCAAGTATTCGTATTTGTCCATGGGAGT
GAAATAGTGCGTCGAGACTCGCAAACAGTACAATTTGAGAATGAGAATTT
TAAAGGTCCCTTCCTAGACTGATTAGTCGTTAGTCGATACCATGTGGTTG
ACTGTATTACTATCACTCTACTCGAAAATGATGCTCCTTTTGGTTCTCCA
GTCCTAGTAATATTTTACGTGTATAGACCGTGTGCAGCCCACCCCGTCTT
CAGCCTCGCCCCTGCTTGGGGTCGGTCGAGACCTGGGTGACAAGGGTTAC
CAAGGCTGAATTGGTCGTCCAAGTTGAACAAGTCCATCGTCGGAGCCGTA
AAAAAAATGTATATCTTTAATTCTGCATTACCTTTTAATGCTGTCTTACG
TTTTTTGTTTTTTTCATGTTTTCGTTGTTGGAGTTCGGGCTATGCTAGAT
GAGAGCAATGCCGTGATGTTTGACCCGCCTTCCCCGCCATGACAGTCGCA
TCTACCAGCACATCATCTCGAAACGTTACTCCATTTGTTCGTTTGCGGGT
GTTTTAAAAAAATAACAAAAACACAGGTAGAGGGCATGGTCAAGGTGTCA
GAGGTGTACCGCGTGCACGCGGTCAGACCAACAGCGTCTGTGCTGCCCCC
GCCGGTGGTGGGGGCGGCGGCGGATCCGGCTGGAGACCACAACAACACGG
ACATTCACCAGGCGCCGTCAATTTCTCAATCGGGGGGCAATGTGACAACG
CCCTGGAGTGACGCGAATGGTGCCGGTGGCGCTGAAAAGGCTGGCGTCGA
TGTCGGCGATGGCGATGCTAACGGTCGCCTGGGCCACGGCGATCAACTGC
CAACGGCCGTTACGTCGTGGCCTCCGTCCCCGCCGTCTTCGACGAGTCGG
CCAACAGTGTACCAGCCAGGGGCATTACCAGCAGCAACGGCAGCAGCAGT
CGCTACAGATAGTGTCTCCGACATGCAAGCTTCTCCGGATACTAGCAACC
ACGCGACCGCGCCAGGCGACAATGGCGGTGCGAGCGACAGCGGCACTAGT
GTTGGCAATAACAGCAGCGCTCAAGCTACTGCGACGGCGGCCGCCGCCGC
CGCAGCAGCAGCCGTCGCAGTTGCAGTCCAACAACACCCCAACAGTGCCC
CCGGCAGGCCCCAGCACGCCCCCGAAGTCCACCTTCCCCAACACAATGAA
GACCCCCACAACAACCGAGGAGGGCAGTACGCCCCGCACACAGCGGCGGC
GGCGGCTGCTGCTGCCGCCAGCACCCCCGTTTCACAGCAGGCTCGGGATG
GGGAGGAAACTGAGGATGAATCGGACGGGCCTGCTGTGAGAGGAGCAAGG
GGCGGCGGGGCGGCGGCGGGTAGGAACAGGAGTGAACAGCAGCAGCAGCA
GCAGGATCCCGTCGAAGGACAGTCTTCGCTTATGTTGCAACGTGGCACTC
GTCCCACAGGATTCCCGCAGCACCAGCTGCTCAACTCGTCCGCGTTTGTA
CGGCTGGCCCCTTCAGCTGCTGCTGGTGCTGCCGTCGCCGGCCATAATGG
CAACGTACTTGCACAGCAGCAGTCCTCCTTGCCACCTGCCGCTGCTCCGG
CCGCACCACAAGCCAGAATGCAGCGGGGTGTCCACCGCAACAACACAAAT
CTTGAAGTGGTGACGGGGTCGTCGGCGACAACTCCAGCACATTCCACCAC
TAAACCTGAGGTGCAAGAGCAGGATCATCATCGGGATCGAACAACACATC
GGTATAATGACCAAGAACAGATTCCTTACGTCGCTGATCAAGACCGACCG
TCCCCGCAGCACGGCAGCGGTAGCGGTGGCGGCGGTGGCGGCGGCGGTAT
CAGTGATTCCACCGATTGTCGCGATGAACACCAGGCCATTGTGATGGAGC
AAAGGATCGGAGAGTATCGCACCACGGTACCTCCAGTGCCTTTGCCCCCG
TCCTTATCCCCTCCCCTCCCAGAGAGAGGGGAGCGGGTCGGATAGAGCAC
ATGAAAGCGTTTTTGTTGTTTTCCACATCATGTTTTTGGTATGTTTTTCA
GAGTGAAAGAATGCTTGTTGACTTTGATTTGGTTCGCTCGAGTCGTTTTC
GCGTTTCTAGC back to topCoding sequence (CDS) from alignment at H-paniculata_contig17557:84..5044- >mRNA_H-paniculata_contig17557.4165.1 ID=mRNA_H-paniculata_contig17557.4165.1|Name=mRNA_H-paniculata_contig17557.4165.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3042bp|location=Sequence derived from alignment at H-paniculata_contig17557:84..5044- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTGAGCCAGAAGCGCGTTCGATGCTCGATGAACAAATGTTACCGGAG
GGCTGGCTACGGATTCGCCGGGCAAGCAGGAAAATTCTGCGTCGAGCATC
AGATGGTGAGCCAGAAGCGCGTTCGATGCTCGATGAACAAATGTTACCGG
AGGGCTGGCTACGGATTCGCCGGGCAAGCAGGAAAATTCTGCGTCGAGCA
TCAGGTAGAGGGCATGGTCAAGGTGTCAGAGGTGTACCGCGTGCACGCGG
TCAGACCAACAGCGTCTGTGCTGCCCCCGCCGGTGGTGGGGGCGGCGGCG
GATCCGGCTGGAGACCACAACAACACGGACATTCACCAGGCGCCGTCAAT
TTCTCAATCGGGGGGCAATGTGACAACGCCCTGGAGTGACGCGAATGGTG
CCGGTGGCGCTGAAAAGGCTGGCGTCGATGTCGGCGATGGCGATGCTAAC
GGTCGCCTGGGCCACGGCGATCAACTGCCAACGGCCGTTACGTCGTGGCC
TCCGTCCCCGCCGTCTTCGACGAGTCGGCCAACAGTGTACCAGCCAGGGG
CATTACCAGCAGCAACGGCAGCAGCAGTCGCTACAGATAGTGTCTCCGAC
ATGCAAGCTTCTCCGGATACTAGCAACCACGCGACCGCGCCAGGCGACAA
TGGCGGTGCGAGCGACAGCGGCACTAGTGTTGGCAATAACAGCAGCGCTC
AAGCTACTGCGACGGCGGCCGCCGCCGCCGCAGCAGCAGCCGTCGCAGTT
GCAGTCCAACAACACCCCAACAGTGCCCCCGGCAGGCCCCAGCACGCCCC
CGAAGTCCACCTTCCCCAACACAATGAAGACCCCCACAACAACCGAGGAG
GGCAGTACGCCCCGCACACAGCGGCGGCGGCGGCTGCTGCTGCCGCCAGC
ACCCCCGTTTCACAGCAGGCTCGGGATGGGGAGGAAACTGAGGATGAATC
GGACGGGCCTGCTGTGAGAGGAGCAAGGGGCGGCGGGGCGGCGGCGGGTA
GGAACAGGAGTGAACAGCAGCAGCAGCAGCAGGATCCCGTCGAAGGACAG
TCTTCGCTTATGTTGCAACGTGGCACTCGTCCCACAGGATTCCCGCAGCA
CCAGCTGCTCAACTCGTCCGCGTTTGTACGGCTGGCCCCTTCAGCTGCTG
CTGGTGCTGCCGTCGCCGGCCATAATGGCAACGTACTTGCACAGCAGCAG
TCCTCCTTGCCACCTGCCGCTGCTCCGGCCGCACCACAAGCCAGAATGCA
GCGGGGTGTCCACCGCAACAACACAAATCTTGAAGTGGTGACGGGGTCGT
CGGCGACAACTCCAGCACATTCCACCACTAAACCTGAGGTGCAAGAGCAG
GATCATCATCGGGATCGAACAACACATCGGTATAATGACCAAGAACAGAT
TCCTTACGTCGCTGATCAAGACCGACCGTCCCCGCAGCACGGCAGCGGTA
GCGGTGGCGGCGGTGGCGGCGGCGGTATCAGTGATTCCACCGATTGTCGC
GATGAACACCAGGCCATTGTGATGGAGCAAAGGATCGGAGAGTATCGCAC
CACGGTACCTCCAGTGCCTTTGCCCCCGTCCTTATCCCCTCCCCTCCCAG
AGAGAGGGGAGCGGGTCGGATAGGTAGAGGGCATGGTCAAGGTGTCAGAG
GTGTACCGCGTGCACGCGGTCAGACCAACAGCGTCTGTGCTGCCCCCGCC
GGTGGTGGGGGCGGCGGCGGATCCGGCTGGAGACCACAACAACACGGACA
TTCACCAGGCGCCGTCAATTTCTCAATCGGGGGGCAATGTGACAACGCCC
TGGAGTGACGCGAATGGTGCCGGTGGCGCTGAAAAGGCTGGCGTCGATGT
CGGCGATGGCGATGCTAACGGTCGCCTGGGCCACGGCGATCAACTGCCAA
CGGCCGTTACGTCGTGGCCTCCGTCCCCGCCGTCTTCGACGAGTCGGCCA
ACAGTGTACCAGCCAGGGGCATTACCAGCAGCAACGGCAGCAGCAGTCGC
TACAGATAGTGTCTCCGACATGCAAGCTTCTCCGGATACTAGCAACCACG
CGACCGCGCCAGGCGACAATGGCGGTGCGAGCGACAGCGGCACTAGTGTT
GGCAATAACAGCAGCGCTCAAGCTACTGCGACGGCGGCCGCCGCCGCCGC
AGCAGCAGCCGTCGCAGTTGCAGTCCAACAACACCCCAACAGTGCCCCCG
GCAGGCCCCAGCACGCCCCCGAAGTCCACCTTCCCCAACACAATGAAGAC
CCCCACAACAACCGAGGAGGGCAGTACGCCCCGCACACAGCGGCGGCGGC
GGCTGCTGCTGCCGCCAGCACCCCCGTTTCACAGCAGGCTCGGGATGGGG
AGGAAACTGAGGATGAATCGGACGGGCCTGCTGTGAGAGGAGCAAGGGGC
GGCGGGGCGGCGGCGGGTAGGAACAGGAGTGAACAGCAGCAGCAGCAGCA
GGATCCCGTCGAAGGACAGTCTTCGCTTATGTTGCAACGTGGCACTCGTC
CCACAGGATTCCCGCAGCACCAGCTGCTCAACTCGTCCGCGTTTGTACGG
CTGGCCCCTTCAGCTGCTGCTGGTGCTGCCGTCGCCGGCCATAATGGCAA
CGTACTTGCACAGCAGCAGTCCTCCTTGCCACCTGCCGCTGCTCCGGCCG
CACCACAAGCCAGAATGCAGCGGGGTGTCCACCGCAACAACACAAATCTT
GAAGTGGTGACGGGGTCGTCGGCGACAACTCCAGCACATTCCACCACTAA
ACCTGAGGTGCAAGAGCAGGATCATCATCGGGATCGAACAACACATCGGT
ATAATGACCAAGAACAGATTCCTTACGTCGCTGATCAAGACCGACCGTCC
CCGCAGCACGGCAGCGGTAGCGGTGGCGGCGGTGGCGGCGGCGGTATCAG
TGATTCCACCGATTGTCGCGATGAACACCAGGCCATTGTGATGGAGCAAA
GGATCGGAGAGTATCGCACCACGGTACCTCCAGTGCCTTTGCCCCCGTCC
TTATCCCCTCCCCTCCCAGAGAGAGGGGAGCGGGTCGGATAG back to top
|