mRNA_H-paniculata_contig1742.4113.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1742.4113.1 vs. uniprot
Match: A0A6H5JU68_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JU68_9PHAE) HSP 1 Score: 379 bits (974), Expect = 2.390e-123 Identity = 245/473 (51.80%), Postives = 278/473 (58.77%), Query Frame = 2
Query: 149 LHQHAAQPDVVLSQDRDAYYADSMIGESAAELMETLLGSRRATILAPELKALASCLYFGLTNFVGKQTLGQEYCDIAL---RRGGGGWSSIPYGEIGRPLSSEALRLYTLIRVGVPYLQERMREGWHGLRSLRDPFGRGGAATLAAARVXXXXXXXXXXXXXXXXXARSSSDRNERRAAVVVTASSPEPTSRAVTAEVVTDAATEGGRNVSGRSRTISPSTNTLVEQSNPSLSSHEVRARVLSRTRGASALASAVV----AYLGRVLAWVRRKRPALSGIFEWLLRLHLTVFYFDGQYPSLAMRAVGARLMYTR-EQDEPRARYAILGLFSLLQAIGEVA---------------AAASATFSRGGDGGGVAGTRAAVSGDAADGGAGADVDAASARVPSFTLERTPADAALYPRSRRKCSLCMSPRENAAATPCGHLFCWECIVGWCQTNPECPLCRQPATPQSIVCVYQYA 1498
L ++AAQPDVVLSQ+RD YYA+ ++GE +EL ETLLG+RR ILAPEL+ALASCLYFGLTN GKQTLGQEYC I L RGGG SS PLS L+ YT +RV VPYLQERMREGWHGLRSLRDPFG GGAAT AA XXXXXXX A +P P AV++ GG + R+ A+L RVLAW RR+RPA+SG+ EW LRLHL FYFDG++ ++AMRAVGARL Y R EQ+ R RYA+LGL LLQA E A AA S +F R +G V G G +D G G A RVP+ T RTPAD AL+P SRR+CSLCMS REN AATPCGHLFCWECIVGWCQTNPECPLCRQP PQSIVC+YQYA
Sbjct: 8 LLRYAAQPDVVLSQERDLYYANRLLGEGTSELAETLLGARRVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSGRGGGRESS--------PLSRRPLQAYTFLRVAVPYLQERMREGWHGLRSLRDPFGSGGAATSLAAXXXXXXXXX---------------------------AVAP-PVGIAVSS-------VSGGTAAADRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFLRRVLAWARRRRPAMSGVLEWALRLHLAAFYFDGRFANVAMRAVGARLAYARPEQEAARTRYAVLGLLLLLQAAAEAATASAETAERWRATARAALSESFPRSTEGEAVCGE----GGGPSDLGEGVGDTALPPRVPAATRGRTPADVALFPPSRRRCSLCMSSRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLYQYA 433
BLAST of mRNA_H-paniculata_contig1742.4113.1 vs. uniprot
Match: A0A836CLL0_9STRA (Peroxisome biogenesis factor 10 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL0_9STRA) HSP 1 Score: 198 bits (503), Expect = 2.460e-54 Identity = 153/443 (34.54%), Postives = 196/443 (44.24%), Query Frame = 2
Query: 191 DRDAYYADSMIGESAAELMETLLGSRRATILAPELKALASCLYFGLTNFVGKQTLGQEYCDIALRRGGGGWSSIPYGEIGRPLSSEALRLYTLIRVGVPYLQERMREGWHGLRSLRDPFGRGGAATLAAARVXXXXXXXXXXXXXXXXXARSSSDRNERRAAVVVTASSPEPTSRAVTAEVVTDAATEGGRNVSGRSRTISPSTNTLVEQSNPSLSSHEVRARVLSRTRGASALASAVVAYLGRVLAWVRRKRPALSG---IFEWLLRLHLTVFYFDGQYPSLAMRAVGARLMYTREQDEPRARYAILGLFSLLQAIGEVAAAASAT-----FSRGGDGGGVAGTRAAVSGDAADGGAGADVDAASARVPSFTLERTPADAALYPRSRRKCSLCMSPRENAAATPCGHLFCWECIVGWCQTNPECPLCRQPATPQSIVCVYQY 1495
+RD YY ++ + +++E+ +G RR ++LA EL LA LY GLT G+QT+GQEYCD+ R G PLS+ A Y+L+ V PYL R+ GW LR +R+PF R AAR+ + A + S +PTS A A V ++P N + S+ S G + WL HL +F+ +G+Y + AMRA RLMY R QD P RY ILG+ L + E A A+ FS G GG A + AS RVP + T A A R +C+LCM PRE+ AAT CGHLFCWECIVGWC+TNPECPLCRQPA PQSIVCVY Y
Sbjct: 2 ERDTYYVGAL-ADGLKDVLESCMGVRRTSMLAAELNLLAGTLYQGLTVLAGRQTVGQEYCDLMFSRN---------GLCDVPLSARAG--YSLVEVCWPYLLSRLDTGWPRLRDIREPFDR----HAEAARI------------------------RDAMRAHAAESESQQPTSAAEAAAVTP----------------VAPPDNDGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGAFHLALFFLNGRYANAAMRAARVRLMYNRAQDAPLPRYTILGVLMLARFGFEFGAQAARKLHGIIFSDGDGSGGXXXXXKA--------------NLASQRVPGLSGSDTEAAA-----RRHRCALCMGPREHTAATLCGHLFCWECIVGWCETNPECPLCRQPAEPQSIVCVYHY 369
BLAST of mRNA_H-paniculata_contig1742.4113.1 vs. uniprot
Match: A0A2Z4HN89_IPOPC (Peroxisome biogenesis factor 10 n=4 Tax=Ipomoea TaxID=4119 RepID=A0A2Z4HN89_IPOPC) HSP 1 Score: 134 bits (337), Expect = 1.040e-30 Identity = 134/476 (28.15%), Postives = 191/476 (40.13%), Query Frame = 2
Query: 122 SSSVGSLFRLHQHAAQPDVVLSQDRDAYYADSMIGESAAELMETLLGSRRATILAPELKALASCLYFGLTNFVGKQTLGQEYCDIALRRGGGGWSSIPYGEIGRPLSSEALRLYTLIRVGVPYLQERM--REGWHGLRSLRDPFGRGGAATLAAARVXXXXXXXXXXXXXXXXXARSSSDRNERRAAVVVTASSPEPTSRAVTAEVVTDAATEGGRNVSGRSRTISPSTNTLVEQSNPSLSSHEVRARVLSRTRGASALASAVVAYLGRVLAWVRRKRPALSGIFEWLLRLHLTVFYFDGQYPSLAMRAVGARLMYTREQDEPRARYAILGLFSLLQA-------------IGEVAAAASATFSRGGDGGGVAGTRAAVSGDAA-----DGGAGADVDAASARVPSFTLERTPADAALYPRSRRKCSLCMSPRENAAATPCGHLFCWECIVGWCQTNPECPLCRQPATPQSIVCVY 1489
S G+ R A QP+++ + ++D Y I E+ + L G+R A E K L LYF LT GKQTLG+EYCDI G PYG P + L+ + VPYL ER+ R G+ +L DPF ++A+ E +SR + ST T + S+ S + V +R ++ R +L V W P I + ++R +L FYF+G Y L+ RA G R ++ + R RY ILG F L+Q + ++A+A T GT SG +G ++ A + SF E + + KC+LC+S R++ ATPCGH+FCW CI+ WC PECPLCR PAT S+VC+Y
Sbjct: 23 SGGGGAGIRSFPLAQQPEIMRAAEKDEQYT-FFIYEACRDAFRHLFGTRVAVAYQNETKLLGQMLYFLLTTGAGKQTLGEEYCDITQVAG-------PYG---LPPTPARRALFIFYQTAVPYLAERVSSRIASQGI-TLDDPFDDSYPFSVAS-----------------------------------------ELSSR------------------------VEASTTTEIASSSTSRAHPSVLSRFKTKIREC---------WLYAVQRWPS-VLPLAREILQLVIRANLMFFYFEGLYYHLSKRASGIRYVFIGKPTNQRPRYQILGFFLLVQLCILAAEGLRRRSNLSSISASAQQT---------PFGTYQTSSGRGVPVLNEEG----NLITADSEKGSFVSEPSSTSES-QASGLSKCTLCLSSRQHPTATPCGHVFCWNCIMEWCNEKPECPLCRSPATHSSLVCLY 397
BLAST of mRNA_H-paniculata_contig1742.4113.1 vs. uniprot
Match: A0A6I9TKZ1_SESIN (peroxisome biogenesis factor 10 isoform X1 n=2 Tax=Lamiales TaxID=4143 RepID=A0A6I9TKZ1_SESIN) HSP 1 Score: 129 bits (325), Expect = 4.120e-29 Identity = 127/456 (27.85%), Postives = 185/456 (40.57%), Query Frame = 2
Query: 161 AAQPDVVLSQDRDAYYADSMIGESAAELMETLLGSRRATILAPELKALASCLYFGLTNFVGKQTLGQEYCDIALRRGGGGWSSIPYGEIGRPLSSEALRLYTLIRVGVPYLQERMREGWHGLRSLRDPFGRGGAATLAAARVXXXXXXXXXXXXXXXXXARSSSDRNERRAAVVVTASSPEPTSRAVTAEVVTDAATEGGRNVSGRSRTISPSTNTLVEQSNPSLSSHEVRARVLSRTRGASALASAVVAYLGRVLAWVRRKRPALSGIFEWLLRLHLTVFYFDGQYPSLAMRAVGARLMYTREQDEPRARYAILGLFSLLQ----AIGEVAAAASATFSRGGDGGGVAGTRAAVSGDAADGGAGADVDAASAR---------VPSFTLERTPADAALYPRSRRKCSLCMSPRENAAATPCGHLFCWECIVGWCQTNPECPLCRQPATPQSIVCVY 1489
AAQP+++ + ++D YA S + ++ + L G+R A E K L LYF LT GKQTLG+EYCDI G PYG P + L+ + PY+ ER+ ++ +A+ + A SD +++ + + S S +S S N+ V S +R+ +R G +L V W P F +LR +L FYF+G Y L+ RA G R ++ + R RY ILG+F L+Q A + + +TF+ + S A AG + + S+ E TP + KC+LC+S R+N ATPCGH+FCW CI+ WC PECPLCR PAT S+VC+Y
Sbjct: 35 AAQPEIMRAAEKDDQYA-SFVYDACRDAFRHLFGTRVAVAYQSETKLLGQMLYFVLTTGAGKQTLGEEYCDITQVAG-------PYG---LPPTPARRSLFIFYQTAFPYIAERI------------------SSRIASQGITM---------------ADLLSD------------------------DIIDNETISNSQIQSSASAEMSSSFNSGVPLS--------ALSRLKARITGV---------WLYAVRRWPS-VLPFARECFMLVLRANLMFFYFEGLYYHLSKRAAGIRYVFIGKPTNQRPRYQILGVFLLVQLCIIAAEGLRRSNLSTFAT---------SFQQTSHGAYQTSAGRGLPVLNEEGNLITEDSGKSSWVHESTPTSES-QASGVSKCTLCLSNRQNPTATPCGHVFCWNCIMEWCNEKPECPLCRSPATHSSLVCLY 394
BLAST of mRNA_H-paniculata_contig1742.4113.1 vs. uniprot
Match: M0ZWN8_SOLTU (Peroxisome biogenesis factor 10 n=9 Tax=Solanaceae TaxID=4070 RepID=M0ZWN8_SOLTU) HSP 1 Score: 128 bits (321), Expect = 1.400e-28 Identity = 127/473 (26.85%), Postives = 186/473 (39.32%), Query Frame = 2
Query: 122 SSSVGSLFRLHQHAAQPDVVLSQDRDAYYADSMIGESAAELMETLLGSRRATILAPELKALASCLYFGLTNFVGKQTLGQEYCDIALRRGGGGWSSIPYGEIGRPLSSEALRLYTLIRVGVPYLQERM--REGWHGLRSLRDPFGRGGAATLAAARVXXXXXXXXXXXXXXXXXARSSSDRNERRAAVVVTASSPEPTSRAVTAEVVTDAATEGGRNVSGRSRTISPSTNTLVEQSNPSLSSHEVRARVLSRTRGASALASAVVAYLGRVLAWVRRKRPALSGIFEWLLRLHLTVFYFDGQYPSLAMRAVGARLMYTREQDEPRARYAILGLFSLLQAIGEVAAAASATFSRGGDGGGVAGTRAAVSGDAADGGAGADVDAASARVPSFTLE---------------RTPADAALYPRSRRKCSLCMSPRENAAATPCGHLFCWECIVGWCQTNPECPLCRQPATPQSIVCVY 1489
+S+ GS + AAQP+++ + ++D YA S + E+ + L G+R A E K L LY+ LT GKQTLG+EYCDI G PYG P L+ + VPY+ ER+ R H + TLA + A +PTS S S + S+ S S +R+ ++ R +L + W P I + ++R +L FYF+G Y ++ RA G ++ + R RY ILG+F L+Q + AA S + ++VS A G +A +P E + + + S KC+LC+S R++ ATPCGH+FCW CI+ WC PECPLCR P T S+VC+Y
Sbjct: 21 ASTSGSSVKRFPLAAQPEIMRAAEKDDQYA-SFVYEACRDAFRHLFGTRVAVTYQNEAKLLGQMLYYMLTTGAGKQTLGEEYCDITQVAG-------PYGLSPTPARRA---LFIFYQSAVPYIAERVSSRAASHDI-------------TLADSMADY--------------------------------AFGDDPTS----------------------SNEAEASPTFEIHSSSTSAPSISALSRLKAKIRDF---------WLYTIRRWPSML-PLAREILQLVIRTNLMFFYFEGLYYHISKRAAGIHYVFIGKPMNQRPRYQILGVFLLIQLC--ILAAEGLRRS----------SLSSVSTSAQQAPFGTYRTSAGRGLPVLNEEGNLITAETEKYGLVAESTSTSESQGNSPSKCTLCLSSRQHPTATPCGHVFCWNCIMEWCNEKPECPLCRSPVTHSSLVCLY 393
BLAST of mRNA_H-paniculata_contig1742.4113.1 vs. uniprot
Match: A0A485LD12_9STRA (Aste57867_19380 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LD12_9STRA) HSP 1 Score: 127 bits (320), Expect = 1.480e-28 Identity = 66/191 (34.55%), Postives = 100/191 (52.36%), Query Frame = 2
Query: 923 VLAWVRRKRPALSGIFEWLLRLHLTVFYFDGQYPSLAMRAVGARLMYTREQDEPRARYAILGLFSLLQAIGEVAAAASATFSRGGDGGGVAGTRAAVSGDAADGGAGADVDAASARVPSFTLERTPADAALYPRSRRKCSLCMSPRENAAATPCGHLFCWECIVGWCQTNPECPLCRQPATPQSIVCVYQY 1495
V W R ++ GI L + HL +F+ +G+Y ++ R G R + ++ +P A++AILG L++A+ A R + A+ A V+ +R PAD + P+ +KC+LC++ R + + TPCGH+FCWECIVGWCQ+ PECPLCRQ PQ + C+Y Y
Sbjct: 213 VKLWEARTGLSVDGIVHGLAQCHLALFFLNGRYFHISKRVAGLRYVLSQRLSQPFAQFAILGYMILVRAMISACLALPPAM------------RCLLGHQVANSRPAAMVEG----------KRVPADTGVSPKQTKKCALCLTERSHPSMTPCGHVFCWECIVGWCQSKPECPLCRQVVLPQDVKCLYNY 381
BLAST of mRNA_H-paniculata_contig1742.4113.1 vs. uniprot
Match: A0A328E4H4_9ASTE (RING-type domain-containing protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A328E4H4_9ASTE) HSP 1 Score: 127 bits (319), Expect = 2.630e-28 Identity = 129/472 (27.33%), Postives = 185/472 (39.19%), Query Frame = 2
Query: 122 SSSVGSLFRLHQHAAQPDVVLSQDRDAYYADSMIGESAAELMETLLGSRRATILAPELKALASCLYFGLTNFVGKQTLGQEYCDIALRRGGGGWSSIPYGEIGRPLSSEALRLYTLIRVGVPYLQERM--REGWHGLRSLRDPFGRGGAATLAAARVXXXXXXXXXXXXXXXXXARSSSDRNERRAAVVVTASSPEPTSRAVTAEVVTDAATEGGRNVSGRSRTISPSTNTLVEQSNPSLSSHEVRARVLSRTRGASALASAVVAYLGRVLAWVRRKRPALSGIFEWLLRLHLTVFYFDGQYPSLAMRAVGARLMYTREQDEPRARYAILGLFSLLQ------------AIGEVAAAASATFSRGGDGGGVAGTRAAVSGDAAD--GGAGADVDAASARVPSFTLERTPADAALYPRSRRKCSLCMSPRENAAATPCGHLFCWECIVGWCQTNPECPLCRQPATPQSIVCVY 1489
SS G R A QP+++ + ++D Y ++ ES + L G+R A E K L LYF LT GKQTLG+EYCDI G P+G P + L+ + VPYL ER R G+ +L DPF D + GG + S S ++ T S SLS R+ ++ R +L V W P I + ++R +L FYF+G Y + RA G R ++ +Q R RY ILG+F L+Q ++ ++A+ T GT G+ G + S + + ++ + KC+LC+S R++ ATPCGH+FCW CI+ WC PECPLCR PAT S+VC+Y
Sbjct: 20 SSGGGGGVRSFPMAQQPEIMRAAEKDDQYT-LLVYESCRDAFRHLFGTRVAVSYQNETKLLGQMLYFLLTTGAGKQTLGEEYCDITQVAG-------PFGV---PPTPARRALFIFYQTTVPYLAERFSSRLASEGI-TLDDPFD---------------------------------------------------------------DDYSFGGASASSGRVEASTTSETTSFSSRESLSFFS---RLKAKLRRC---------WLHAVQRWPS-VFPLAREILQLIIRANLMFFYFEGLYYHSSKRASGIRYVFIGKQANQRPRYQILGVFLLIQLCVLAAERLRRSSLSSLSASVQQT---------PLGTYQYSPGNCVPILDEEGNLITGGSEKGSYVFQSSSTSEKQSQTSGQSKCTLCLSNRQHPTATPCGHVFCWNCIMEWCNEKPECPLCRSPATHSSLVCLY 394
BLAST of mRNA_H-paniculata_contig1742.4113.1 vs. uniprot
Match: A0A1U8E1S1_CAPAN (peroxisome biogenesis factor 10 isoform X1 n=7 Tax=Solanoideae TaxID=424551 RepID=A0A1U8E1S1_CAPAN) HSP 1 Score: 126 bits (317), Expect = 4.500e-28 Identity = 130/464 (28.02%), Postives = 185/464 (39.87%), Query Frame = 2
Query: 161 AAQPDVVLSQDRDAYYADSMIGESAAELMETLLGSRRATILAPELKALASCLYFGLTNFVGKQTLGQEYCDIALRRGGGGWSSIPYGEIGRPLSSEALRLYTLIRVGVPYLQERM--REGWHGLR---SLRD-PFGRGGAATLAAARVXXXXXXXXXXXXXXXXXARSSSDRNERRAAVVVTASSPEPTSRAVTAEVVTDAATEGGRNVSGRSRTISPSTNTLVEQSNPSLSSHEVRARVLSRTRGASALASAVVAYLGRVLAWVRRKRPALSGIFEWLLRLHLTVFYFDGQYPSLAMRAVGARLMYTREQDEPRARYAILGLFSLLQAIGEVAAAASATFSRGGDGGGVAGTRAAVSGDAADGGAGADVDAASARVPSFTLERT--PADAALYP-------------RSRRKCSLCMSPRENAAATPCGHLFCWECIVGWCQTNPECPLCRQPATPQSIVCVY 1489
AAQP+++ + ++D YA S + E+ + L G+R A E K L LY+ LT GKQTLG+EYCDI G PYG P L+ + VPY+ ER+ R G+ S+ D PFG +SS+ E P PT VE + S S+ + A L + + +L V W P + I + ++R +L FYF+G Y ++ RA G ++ + R RY ILG+F L+Q + AA S + ++VS A G +A +P E A++ Y S KC+LC+S R++ ATPCGH+FCW CI+ WC PECPLCR P T S+VC+Y
Sbjct: 30 AAQPEIMRAAEKDDQYA-SFVYEACRDAFRHLFGTRVAVAYQNEAKLLGQMLYYMLTTGAGKQTLGEEYCDITQVAG-------PYGLSPTPARRA---LFIFHQSAVPYIAERVSSRVASRGITLADSMADYPFG----------------------------DVPTSSNEAE-----------PSPT----------------------------------VEIQSYSTSTSSISALSLLKAKMRDF-------WLYAVRRWPS-VLPLVREILQLVIRTNLMFFYFEGLYYHISKRAAGIHYVFIGKPMNQRPRYQILGVFLLIQLC--ILAAEGLRRS----------SLSSVSASAQQAPFGTYRTSAGRGLPVLNEEGNLITAESEKYGLVAEPTSTLESQGSSPSKCTLCLSSRQHPTATPCGHVFCWNCIMEWCNEKPECPLCRSPVTHSSLVCLY 389
BLAST of mRNA_H-paniculata_contig1742.4113.1 vs. uniprot
Match: A0A022PV85_ERYGU (RING-type domain-containing protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022PV85_ERYGU) HSP 1 Score: 125 bits (313), Expect = 1.350e-27 Identity = 125/460 (27.17%), Postives = 181/460 (39.35%), Query Frame = 2
Query: 161 AAQPDVVLSQDRDAYYADSMIGESAAELMETLLGSRRATILAPELKALASCLYFGLTNFVGKQTLGQEYCDIALRRGGGGWSSIPYGEIGRPLSSEALRLYTLIRVGVPYLQERMREGWHGLRSLRDPFGRGGAATLAAARVXXXXXXXXXXXXXXXXXARSSSDRNERRAAVVVTASSPEPTSRAVTAEVVTDAATEGGRNVSGRSRTISPSTNTLVEQSNPSLSSHEVRARVLSRTRGASALASAVVAYLGRVLAWVRRKRPALSGIFEWLLRLHLTVFYFDGQYPSLAMRAVGARLMYTREQDEPRARYAILGLFSLLQA------------IGEVAAAASATF-----SRGGDGGGVAGTRAAVSGDAADGGAGADVDAASARVPSFTLERTPADAALYPRSRRKCSLCMSPRENAAATPCGHLFCWECIVGWCQTNPECPLCRQPATPQSIVCVY 1489
AAQP+++ + ++D YA S + ++ + L G+R A E K L LY+ LT GKQTLG+EYCDI + P+G P + L+ + PY+ ER+ + R A++ +T + ++D E N+ I STN+ S S R+ R G +L V W P F +LR +L FYF+G Y L+ RA G R ++ + + R RY ILG+F L+Q + +A + T + GG G V +++ AD S VP T KC+LC+S R++ ATPCGH+FCW CI+ WC PECPLCR PAT S+VC+Y
Sbjct: 35 AAQPEIMRAAEKDDQYA-SFVYDACRDAFRHLFGTRVAVAYQSETKLLGQMLYYVLTTGAGKQTLGEEYCDITQ-------VARPHG---LPPTPARRSLFIFYQTAFPYIAERI---------------------------------------------------SSRIASLGITMD-----------DSLSDDIIENTSNIQ-----IQSSTNSGARVSTLS--------RLKYRFSGL---------WLYAVQRWPSMV-PIAREFFTLILRTNLMFFYFEGLYYHLSKRAAGVRYVFIGKPNNQRPRYQILGVFLLVQLCILAAEGLRRSNLSSLATSFQQTSLGTYQTSGGRGLPVLNEEGSLA---------ADDSGKSTWVPEATSTSE--------SQVSKCTLCLSNRQHPTATPCGHVFCWNCIMEWCNEKPECPLCRSPATHSSLVCLY 381
BLAST of mRNA_H-paniculata_contig1742.4113.1 vs. uniprot
Match: UPI000C1D75F2 (peroxisome biogenesis factor 10 n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D75F2) HSP 1 Score: 125 bits (313), Expect = 1.700e-27 Identity = 120/460 (26.09%), Postives = 179/460 (38.91%), Query Frame = 2
Query: 161 AAQPDVVLSQDRDAYYADSMIGESAAELMETLLGSRRATILAPELKALASCLYFGLTNFVGKQTLGQEYCDIALRRGGGGWSSIPYGEIGRPLSSEALRLYTLIRVGVPYLQERM--REGWHGLRS----LRDPFGRGGAATLAAARVXXXXXXXXXXXXXXXXXARSSSDRNERRAAVVVTASSPEPTSRAVTAEVVTDAATEGGRNVSGRSRTISPSTNTLVEQSNPSLSSHEVRARVLSRTRGASALASAVVAYLGRVLAWVRR---KRPALSGIFEWLLRLHLTVFYFDGQYPSLAMRAVGARLMYTREQDEPRARYAILGLFSLLQAIGEVA--------AAASATFSRGGDGGGVAGTRAAVSGDAADGGAGADVDAASARVPSFTLERTPADAALYPRSRRKCSLCMSPRENAAATPCGHLFCWECIVGWCQTNPECPLCRQPATPQSIVCVY 1489
AAQP+++ + ++D YA S + ++ + L G+R A E K L LY+ LT GKQTLG+EYCDI G G P + L+ + PY+ ER+ R G+ + DP+G + T ++ + P + A T + SAL+ G L VRR P +F +LR +L FYF+G Y ++ RA G R ++ + R RY ILG+F L+Q A ++ + TF + G T + DG +V + + ++ E T + + KC+LC+S R++ ATPCGH+FCW CI+ WC PECPLCR P T S+VC+Y
Sbjct: 39 AAQPEIMRAAEKDDQYA-SFVYDACRDAFRHLFGTRVAVAYQSETKLLGQMLYYVLTTGAGKQTLGEEYCDITQVA----------GSYGLPPTPARRALFIFYQTAFPYIAERVSSRIASQGITMADSLMDDPYGNNSSQTQSSTSIQI-------------------------------------PLTSAPTGPL--------------------------------------------------SALSRLKTKITGLWLYTVRRWPSMLPLARELFMLILRTNLMFFYFEGLYYHISNRAAGIRYVFIGKPTNQRPRYQILGVFLLVQLCILAAEGLRRSNISSFTNTFQQSSVGAHQTPTGRGLPVINEDG----NVTSEDSGKDNWISEST-STSEFQVGGIGKCTLCLSTRQHPTATPCGHVFCWNCIMEWCNEKPECPLCRSPVTHSSLVCLY 395 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1742.4113.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1742.4113.1 >prot_H-paniculata_contig1742.4113.1 ID=prot_H-paniculata_contig1742.4113.1|Name=mRNA_H-paniculata_contig1742.4113.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=493bp MELETNASAQHSMPSLPDDHAIIRDNNILGRPMSSSVGSLFRLHQHAAQPback to top mRNA from alignment at H-paniculata_contig1742:1087..4906- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1742.4113.1 ID=mRNA_H-paniculata_contig1742.4113.1|Name=mRNA_H-paniculata_contig1742.4113.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3820bp|location=Sequence derived from alignment at H-paniculata_contig1742:1087..4906- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1742:1087..4906- >mRNA_H-paniculata_contig1742.4113.1 ID=mRNA_H-paniculata_contig1742.4113.1|Name=mRNA_H-paniculata_contig1742.4113.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2958bp|location=Sequence derived from alignment at H-paniculata_contig1742:1087..4906- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |