mRNA_H-paniculata_contig17339.4081.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig17339.4081.1
Unique NamemRNA_H-paniculata_contig17339.4081.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig17339.4081.1 vs. uniprot
Match: D8LQS3_ECTSI (Short-chain dehydrogenase/reductase SDR n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQS3_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 1.780e-37
Identity = 83/186 (44.62%), Postives = 120/186 (64.52%), Query Frame = 3
Query:    3 DEDNRKIVETAVETFGGLHVSFINAGVVILSPLADLTEDAIDSAFGPNFKGVAFGLKHQLPAIAKS-WDKGAVVVNTSISASRVFS--DMPFISMYACSKAAAEMMVKYGAVEGAAMNVRVNGIAPGTVRTPLSLTIGEEKLEETWKKTHLTGKPIMVEDVVSLVVFLLSDGAQVMTGSIHRVDQG 551
            + D +K+V+TA+E FGGLHV+F NAGV    P AD+TED ID     N K +A+  K+Q+PA+  +   KG+++VNTS +A R  +   M    MY+ SKAAAEM++KY A+EGAA  VRVN ++PG V TP+   +  E L      T L  +PI  E++ ++V+FL S+ A ++TGS + +D G
Sbjct:   66 EADCKKMVDTAIEKFGGLHVAFNNAGVFRAVPFADITEDTIDDLLNINVKSLAWCFKYQIPAMKNTAGGKGSIIVNTSSTALRTTALPGMAGGGMYSASKAAAEMLMKYAAIEGAASGVRVNSVSPGHVETPIYGEMPRETLVAVTGTTQLIARPIKPEEIANVVIFLASEDAAMVTGSTYTMDGG 251          
BLAST of mRNA_H-paniculata_contig17339.4081.1 vs. uniprot
Match: D8LQS1_ECTSI (Short-chain dehydrogenase/reductase SDR n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQS1_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 1.780e-36
Identity = 82/185 (44.32%), Postives = 120/185 (64.86%), Query Frame = 3
Query:    9 DNRKIVETAVETFGGLHVSFINAGVVILSPLADLTEDAIDSAFGPNFKGVAFGLKHQLPAIAKS-WDKGAVVVNTSISASRVFSDMPFIS---MYACSKAAAEMMVKYGAVEGAAMNVRVNGIAPGTVRTPLSLTIGEEKLEETWKKTHLTGKPIMVEDVVSLVVFLLSDGAQVMTGSIHRVDQG 551
            D +K+V+TA+E FGGLHV+F NAGV    P  D+TED ID     N K +A+ LK+Q+PA+  +   KG+++VNTS++  R  S +P ++   MY+ SKAAAEM++KY A+EGAA  VRVN +APG V TP+   +  + L      T L  +P   E++  +V+FL S+ A ++TGS + +D G
Sbjct:   70 DCKKMVDTAIEKFGGLHVAFNNAGVFKTVPFVDITEDTIDDILNTNVKSIAWCLKYQIPAMKDTAGGKGSIIVNTSVTGLRP-SALPGLTGAGMYSASKAAAEMLMKYAAIEGAASGVRVNSVAPGLVETPIFGDMPVDTLVAFAGATQLVPRPCAPEEIAKVVIFLASEDATMVTGSTYTMDGG 253          
BLAST of mRNA_H-paniculata_contig17339.4081.1 vs. uniprot
Match: A0A835YQ90_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ90_9STRA)

HSP 1 Score: 140 bits (352), Expect = 5.230e-34
Identity = 79/188 (42.02%), Postives = 115/188 (61.17%), Query Frame = 3
Query:    3 DEDNRKIVETAVETFGGLHVSFINAGVVILSPLADLTEDAIDSAFGPNFKGVAFGLKHQLPAIAKSWDKGAVVVNTSISASRV--FSDMPFISMYACSKAAAEMMVKYGAVEGAAMNVRVNGIAPGTVRTPLSLTIGEEKLEETWKKTHLTGKPIMVEDVVSLVVFLLSDGAQVMTGSIHRVDQGASL 560
            DEDN+++V+T +ET+G L++SFINAGV +  P++++    +D  +  N KGVA+ LK+QLPAI KS  KG+VV+N+S + S V  F        YA +KAA ++++KY A+E      RVN IAPG + T L +   EE  +   K  HL  +    E++   V FL SD A  +TG++   D GASL
Sbjct:   66 DEDNKRLVDTTLETYGSLNLSFINAGVHLAKPISEVDGSMLDKLYDVNVKGVAYALKYQLPAIEKSGGKGSVVINSSCAGSTVTAFPIFKGNGPYASTKAAVDILMKYAAIEAIDHGTRVNSIAPGAIYTSL-VEAPEEVFDSIGKMVHLMPRAGRPEEIARCVCFLASDDASFVTGTVMIADGGASL 252          
BLAST of mRNA_H-paniculata_contig17339.4081.1 vs. uniprot
Match: A0A835YRJ1_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRJ1_9STRA)

HSP 1 Score: 136 bits (342), Expect = 1.290e-32
Identity = 79/188 (42.02%), Postives = 115/188 (61.17%), Query Frame = 3
Query:    3 DEDNRKIVETAVETFGGLHVSFINAGVVILSPLADLTEDAIDSAFGPNFKGVAFGLKHQLPAIAKSWDKGAVVVNTSISASRVFSDMPFISM--YACSKAAAEMMVKYGAVEGAAMNVRVNGIAPGTVRTPLSLTIGEEKLEETWKKTHLTGKPIMVEDVVSLVVFLLSDGAQVMTGSIHRVDQGASL 560
            DEDN+++V+ A+ET+G ++VSFINAG+   +  A++T+  +D  +  N KGVA+ LK+QL AI KS  KG+VV+N+S +   V +   F S   YA +KAAA++++KY A+E      RVN IAPG V T L     E+  +E  K  HL  +    E++   V FL SD A  +TG++   D G SL
Sbjct:   67 DEDNKRLVDKALETYGAVNVSFINAGIYRTAVAAEVTKTILDELYDTNVKGVAYALKYQLAAIEKSGGKGSVVINSSCAGGNVTAFPVFRSNGPYASTKAAADILMKYAAIEAIDHGTRVNSIAPGVVATGLG-DFPEDAFDEMGKTVHLMPRAGRPEEIARCVCFLASDDASFVTGTVLYADGGFSL 253          
BLAST of mRNA_H-paniculata_contig17339.4081.1 vs. uniprot
Match: A0A835ZCI5_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCI5_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.920e-32
Identity = 79/192 (41.15%), Postives = 115/192 (59.90%), Query Frame = 3
Query:    3 DEDNRKIVETAVETFGGLHVSFINAGVVILSPLADLTEDAIDSAFGPNFKGVAFGLKHQLPAIAKSWDKGAVVVNTSISASRVFSDMPFIS--MYACSKAAAEMMVKYGAVEGAAMNVRVNGIAPGTVRTPLSLTIGEEKLEETWKK----THLTGKPIMVEDVVSLVVFLLSDGAQVMTGSIHRVDQGASL 560
            D  N++IV+ A+  +G LH++F+NAG    +P+  +TE+  D  F  N K VAFGLKH LPAI KS   G+V++N+S  A R  ++  F    +Y+ SKAAA+M++KY A+E +    RVN IAPG V+T +   +GE   +E++        L G+    E++   V FL SD A  +TGS+H VD G  L
Sbjct:   69 DAANKEIVDAALSAYGKLHIAFLNAGTYGGAPVDQVTEELFDKIFDVNVKSVAFGLKHVLPAIEKSGGGGSVIINSSGMALRATANPAFAGGGLYSASKAAADMVMKYAAIEASKHKTRVNSIAPGIVQTAI---MGEGMTDESYNAFAAPVSLVGRVGTPEEIAPFVCFLASDEATFITGSVHEVDGGWGL 257          
BLAST of mRNA_H-paniculata_contig17339.4081.1 vs. uniprot
Match: A0A835YKB8_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKB8_9STRA)

HSP 1 Score: 133 bits (335), Expect = 1.250e-31
Identity = 81/188 (43.09%), Postives = 114/188 (60.64%), Query Frame = 3
Query:    3 DEDNRKIVETAVETFGGLHVSFINAGVVILSPLADLTEDAIDSAFGPNFKGVAFGLKHQLPAIAKSWDKGAVVVNTSISASRV--FSDMPFISMYACSKAAAEMMVKYGAVEGAAMNVRVNGIAPGTVRTPLSLTIGEEKLEETWKKTHLTGKPIMVEDVVSLVVFLLSDGAQVMTGSIHRVDQGASL 560
            DEDN+++V+TA+ET+G L+VSFINAGV    P++++    +D+ +  N KGVA+ LK+QLPAI KS  KG+VV+N+S   S V  F        YA +KAA ++++KY A+E      RVN IA G V T L +   EE  EE  K   L  +    E++   V FL SD A  +TG++   D G+SL
Sbjct:   69 DEDNKRLVDTALETYGLLNVSFINAGVHRAKPISEVDASMLDTLYDVNVKGVAYALKYQLPAIEKSGGKGSVVINSSCLGSTVTAFPIFKGNGPYASTKAAVDILMKYAAIEAIDHGTRVNSIAAGAVFTNL-VGAPEEAFEEMGKMVGLMPRAGRPEEIARCVCFLASDEASFVTGTVLTADGGSSL 255          
BLAST of mRNA_H-paniculata_contig17339.4081.1 vs. uniprot
Match: A0A835ZEC4_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEC4_9STRA)

HSP 1 Score: 133 bits (335), Expect = 1.530e-31
Identity = 82/194 (42.27%), Postives = 111/194 (57.22%), Query Frame = 3
Query:   12 NRKIVETAVETFGGLHVSFINAGVVILSPLAD-----LTEDAIDSAFGPNFKGVAFGLKHQLPAIAKSWDKGAVVVNTSISASRVF--SDMPFISMYACSKAAAEMMVKYGAVEGAAMNVRVNGIAPGTVRTPLSLTIGEEKLEETW---KKTHLTGKPIMVEDVVSLVVFLLSDGAQVMTGSIHRVDQGASLI 563
            N+ +V+ A+  +G L V+F NAG    +P A+     +T + +D+    NFK V FG K+ LPAI KS   G++VVN+S + S     S    I+ YA SKAA +M+VKY AVE A  N RV  +APGTV TP+    G+ K  E     K   L  +    E+V   V FLLSD A  +TGS+H VD GAS++
Sbjct:   72 NKAMVDLAMSKYGRLDVAFFNAGTFAGAPFAEASLGHVTNEMVDTVMDTNFKSVVFGFKYALPAIEKSGGHGSIVVNSSAAGSTASAKSVCAGIAPYAASKAAVDMLVKYAAVEAAPHNTRVTSVAPGTVLTPIFQLFGDMKDSEVTDMAKAIQLMQRAGRPEEVARFVCFLLSDDASFVTGSVHSVDGGASIV 265          
BLAST of mRNA_H-paniculata_contig17339.4081.1 vs. uniprot
Match: A0A835YUN2_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUN2_9STRA)

HSP 1 Score: 132 bits (332), Expect = 3.390e-31
Identity = 79/189 (41.80%), Postives = 114/189 (60.32%), Query Frame = 3
Query:    3 DEDNRKIVETAVETFGGLHVSFINAGVVILSPLADLTEDAIDSAFGPNFKGVAFGLKHQLPAIAKSWDKGAVVVNTSISASRVFSDMPFIS--MYACSKAAAEMMVKYGAVEGAAMNVRVNGIAPGTVRTPLSLTIGEEKLEETWKK----THLTGKPIMVEDVVSLVVFLLSDGAQVMTGSIHRVDQG 551
            D  N ++V+ A+ T+G LHV+F+NAG    +P+  +TE+  +  F  N K VAFGLKH LPAI +S   G+VVVN+S    R  ++  F    +YA SKAAA+M+++Y A+E +    RVN +APG VRT L   +GE   E+ +        L G+     +V +LV FL SD A+ +TGS+H +D G
Sbjct:   70 DAANEEMVKAALSTYGKLHVAFLNAGTYGGAPVDQVTEELFNKIFDANVKSVAFGLKHVLPAIERSGGGGSVVVNSSCMGLRAPANPTFTGAGLYAGSKAAADMIMRYAAIEASKHKTRVNSVAPGIVRTEL---MGEGMTEQGYHDFAAPVSLVGRAGTSNEVSALVCFLASDEARFITGSVHEIDGG 255          
BLAST of mRNA_H-paniculata_contig17339.4081.1 vs. uniprot
Match: A0A836CPZ3_9STRA (Short-chain dehydrogenase/reductase SDR n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPZ3_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.970e-29
Identity = 74/160 (46.25%), Postives = 97/160 (60.62%), Query Frame = 3
Query:  105 DLTEDAIDSAFGPNFKGVAFGLKHQLPAIAKSWDKGAVVVNTSISASRVFSDMPFIS---MYACSKAAAEMMVKYGAVEGAAMNVRVNGIAPGTVRTPLSLT----IGEEKLEETWKKTHLTGKPIMVEDVVSLVVFLLSDGAQVMTGSIHRVDQGASLI 563
            D+T + +D+ F  NFK   FG K+ LPAI KS  +G++VVN+S++ S V S  P  S    YA SKAA +M+VKY AVE A  N R+N IAPGTVRTP+       I +  ++E  K   L  +    E+V     FLLSD A  +TGS+H VD GASL+
Sbjct:   87 DITNEMVDTVFATNFKSAVFGFKYALPAIEKSGGQGSIVVNSSVAGS-VASASPLASGNNAYAASKAAVDMLVKYAAVEAALHNTRINSIAPGTVRTPIFQVFAPGIQDNDIDELAKGIQLMQRAASPEEVARFTCFLLSDDASFVTGSVHLVDGGASLV 245          
BLAST of mRNA_H-paniculata_contig17339.4081.1 vs. uniprot
Match: D8LQS5_ECTSI (Short-chain dehydrogenase/reductase SDR n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQS5_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 2.790e-26
Identity = 65/136 (47.79%), Postives = 91/136 (66.91%), Query Frame = 3
Query:   21 IVETAVETFGGLHVSFINAGVVILSPLADLTEDAIDSAFGPNFKGVAFGLKHQLPAIAKS-WDKGAVVVNTSISASRVFSD--MPFISMYACSKAAAEMMVKYGAVEGAAMNVRVNGIAPGTVRTPLSLTIGEEKL 419
            +V+TA++ FGGLHV+F NAGV   +P AD+ ED ID     N K +A+  K+Q+PA+  S   KG+++VNTS +A R  +   M    MYA SKAAAE+++KY A+EGAA  VRVN +A G V+TP+   + +E L
Sbjct:    1 MVDTAIQKFGGLHVAFNNAGVYRSAPFADIMEDTIDDLLNINVKSLAWCFKYQIPAMKDSAGGKGSIIVNTSSTALRPSASPGMTGSGMYAASKAAAELLMKYAAIEGAASGVRVNSVARGLVKTPIFGDMPDETL 136          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17339.4081.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQS3_ECTSI1.780e-3744.62Short-chain dehydrogenase/reductase SDR n=2 Tax=Ec... [more]
D8LQS1_ECTSI1.780e-3644.32Short-chain dehydrogenase/reductase SDR n=1 Tax=Ec... [more]
A0A835YQ90_9STRA5.230e-3442.02Short-chain dehydrogenase/reductase SDR n=1 Tax=Tr... [more]
A0A835YRJ1_9STRA1.290e-3242.02Short-chain dehydrogenase/reductase SDR n=1 Tax=Tr... [more]
A0A835ZCI5_9STRA1.920e-3241.15Short-chain dehydrogenase/reductase SDR n=1 Tax=Tr... [more]
A0A835YKB8_9STRA1.250e-3143.09Short-chain dehydrogenase/reductase SDR n=1 Tax=Tr... [more]
A0A835ZEC4_9STRA1.530e-3142.27Short-chain dehydrogenase/reductase SDR n=1 Tax=Tr... [more]
A0A835YUN2_9STRA3.390e-3141.80Short-chain dehydrogenase/reductase SDR n=1 Tax=Tr... [more]
A0A836CPZ3_9STRA1.970e-2946.25Short-chain dehydrogenase/reductase SDR n=2 Tax=Tr... [more]
D8LQS5_ECTSI2.790e-2647.79Short-chain dehydrogenase/reductase SDR n=1 Tax=Ec... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17339contigH-paniculata_contig17339:1192..4771 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score84.7
Seed ortholog evalue2.7e-14
Seed eggNOG ortholog2880.D8LQS3
Hectar predicted targeting categoryother localisation
EggNOG free text desc.oxidation-reduction process
EggNOG OGsCOG1028@1,KOG0725@2759
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1873
Cds size306
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17339.4081.1prot_H-paniculata_contig17339.4081.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig17339 1966..3464 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929365.99575-UTR-H-paniculata_contig17339:1191..13701622929365.99575-UTR-H-paniculata_contig17339:1191..1370Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17339 1192..1370 +
1691480832.1496732-UTR-H-paniculata_contig17339:1191..13701691480832.1496732-UTR-H-paniculata_contig17339:1191..1370Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17339 1192..1370 +
1622929366.0090134-UTR-H-paniculata_contig17339:1884..19651622929366.0090134-UTR-H-paniculata_contig17339:1884..1965Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17339 1885..1965 +
1691480832.159448-UTR-H-paniculata_contig17339:1884..19651691480832.159448-UTR-H-paniculata_contig17339:1884..1965Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17339 1885..1965 +
1622929366.233958-UTR-H-paniculata_contig17339:3464..47711622929366.233958-UTR-H-paniculata_contig17339:3464..4771Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17339 3465..4771 +
1691480832.1943545-UTR-H-paniculata_contig17339:3464..47711691480832.1943545-UTR-H-paniculata_contig17339:3464..4771Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17339 3465..4771 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929366.0253978-CDS-H-paniculata_contig17339:1965..20161622929366.0253978-CDS-H-paniculata_contig17339:1965..2016Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17339 1966..2016 +
1691480832.169352-CDS-H-paniculata_contig17339:1965..20161691480832.169352-CDS-H-paniculata_contig17339:1965..2016Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17339 1966..2016 +
1622929366.0389335-CDS-H-paniculata_contig17339:2409..25711622929366.0389335-CDS-H-paniculata_contig17339:2409..2571Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17339 2410..2571 +
1691480832.1770997-CDS-H-paniculata_contig17339:2409..25711691480832.1770997-CDS-H-paniculata_contig17339:2409..2571Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17339 2410..2571 +
1622929366.052815-CDS-H-paniculata_contig17339:3371..34641622929366.052815-CDS-H-paniculata_contig17339:3371..3464Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17339 3372..3464 +
1691480832.1843023-CDS-H-paniculata_contig17339:3371..34641691480832.1843023-CDS-H-paniculata_contig17339:3371..3464Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17339 3372..3464 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig17339.4081.1

>prot_H-paniculata_contig17339.4081.1 ID=prot_H-paniculata_contig17339.4081.1|Name=mRNA_H-paniculata_contig17339.4081.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=102bp
MPFISMYACSKAAAEMMVKYGAVEGAAMNVRVNGIAPGTVRTPLSLTIGE
EKLEETWKKTHLTGKPIMVEDVVSLVVFLLSDGAQVMTGSIHRVDQGASL
I*
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mRNA from alignment at H-paniculata_contig17339:1192..4771+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig17339.4081.1 ID=mRNA_H-paniculata_contig17339.4081.1|Name=mRNA_H-paniculata_contig17339.4081.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3580bp|location=Sequence derived from alignment at H-paniculata_contig17339:1192..4771+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGATGAAGACAACAGAAAGATCGTTGAGACCGCCGTTGAAACGTTCGGT GGGCTACACGTATCATTTATCAACGCCGGGGTGGTAATATTGAGCCCGTT GGCGGACCTCACCGAGGATGCTATTGATTCCGCCTTTGGTCCTAACTTCA AGGGCGTGGCTTTCGGACTCAAACACCAGGTATGCAAGATAAAAACAAGG CAAAGCGAATGGGGCTCTTATGGTCAATTTAAATGAGACCGAATTTGTCA GTCATCCGCAAAATTGGGGGAAACATGCCGAAATACCCTACGGTATGTTG CCGTCATACGTCTGATGCACTTTGTCCGTAGTCGTCAAGTTTTTCGGTTC GCTATCGCGATTTTCAATTTCGGAATAAAGAACATACGTTGCATTGTCGA TTTTGTCAGTCCGTCATGTGCACATGGCTGATGGAGGCGTAAATGTCGAT ACCGGATATGCCGAAGACCGCGATTTGTGCACCTCGTACTGTGAGGTCGT ACTTTTATGGTGGTTACAGACTGAGTTACGCACATGTCGAGCGGTCCCCT GTTGTTTAACAAAGTTGATATCGCACGCTCCACACGTGGAGCATGTTGTA TGGTGTCACGTATGAACGGGACTCAAGTACAAGAGGTTTTCACCAGTGCT TAGCATTCACGCCCTGCCCCACACGTTGATAAATGCTGAACAGCTTCCTG CGATTGCCAAGAGCTGGGACAAGGGTGCAGTGGTCGTCAACACCTCTATA AGTGCATCCCGAGTGTTTTCCGACATGCCATTCATCTCGATGTATGCATG CTCCAAAGCCGCAGCGGAAATGATGGTGAGCATGACCGGTGCAACCGGCG ATACCGCATGAATAAACGCGTTGTATGTGCTCGAACGACAATCCGCTCGC CCTGAAACGAACTCTACTTTTGCTTCGTCGCTGGTTCGCTCGCATAGAGC AAGCGCTCTTAGTGAATATTATCGATGACGAATAAGTCCTTACTAAATCC ACGAGTTGTACTACGCTGGTGGAGCTGTCTTGCCACGAAGATGAAGTGCT TCTTATTTACTTGAAGAAAATATATGTTAAATTTCGGTGCCTCTCTTGCA CCGACGTCGCTGTCAAGTCACTTGCCCAAGGTGCCATAACATGACCATAT GCTCGCTCATGCACGAAAACGGACCGCCTCAAAATTCGTCACACTTGATC GGCACCCCTGCCTTTAAGGTCAAGTATGGAGCTGTGGAAGGGGCAGCTAT GAACGTCCGCGTGAATGGTATTGCCCCGGGAACTGTGCGGACACCATTGT CTTTGACGATAGGCGAGGAAAAGCTTGAGGAAACGTGGAAAAAGACGCAC CTCACTGGAAAACCCATCATGGTGGAAGACGTGAGTTGATCGCTGTATCG CCATTGGCAGCTTCCAGCCACTGCCCAGAGCTGGAGCTATTCGAACAACA AGTGCCAATGTAAACATGACCTACCGCGCGTGGTCACCTGCGCGAAAAGT GGTTTATAAAGCATGACTGATGGACTACTTATGCAATAAAGTCTAAAGTC ATTGCATGGAGCGAACTCTTCGGACTCCACGCGAAAAAGTTCCTCATATC CGTGAGTTTATGTAACAAACTTCGTATTGCTTGGCAGATGAACATGGTTG CTAGACGATCAGCCGGCGCGAACATAGTACTATAGCAACAGCAGTGTTGG TCGCCACGATAATCGTCACTACTCCTCTGCCGCTGGTTCAAACGCCATCA GATCCTCCAGCGACCGGCCAGAGTAAACATACTCACCTACGATCGACCAT AATCAAATATGAAATGTACAAGCCAATTTCGAGATGACGCGAGTCACGAA CAAAACGAAAAAAAACGTTACCGGCTATATAAATTCTTTACACTTTGCCC ATATCTCGTCAGCTAATGGCTCGATTAAAAATAAATAATGGCCCGTGAAC TCTGACGTCATGCGCATTCACGCAGCCTTGGACCGTTCAACATGATCCAG CAATAATCGTTGTTGGAAAAGTTACCAAAAACCATTTCATGCTCAATATA ACATCGCTTCTCAATTTCGGGGATCGTCTGTTTTATCAACAATCTACTCA GTAGTACAGCGGGACGATTCTATTCGATGCACATCTCAAACTTGGCCAAC CTACCCCTCGGTGAATCATGCAATTCGCAGGTAGTGTCGTTGGTGGTGTT CCTGCTCAGCGACGGTGCTCAGGTTATGACAGGTTCCATTCATCGCGTCG ATCAAGGCGCATCGTTGATATAAATAGTTGGGGACGCTCTTCCCGGCCGG CGACCAACGACTGCCCCTTCGCTGCTGTGGATATTGTCTTACAAAGGAAG TTCGCATAGTGAAGATGCAATGTCGGGTGGCGCTCATAATAGATGCTGCG ACTTAAAACAACACAGTATCACCTTTTAGTTTGCGTCTGATAATGATGGT CATAATTGCAGAGTGCCCTGGGAGTATGGTCTAGGTCCGTTTTGAGGGTT ATAATCTCCACGTAGTATGTACTTGACAAATATTTTCGTTTACCATTAAA TTGGACAGGTCCGTAGACGATGGATTGATTTCTTGATGTCGGAGCAGAGT CGAAGCCCACCGAATCGCTTTGTCTCCCGTACAGCATAGCTTCATCCCGT CCTTAGATATTACATTTTTCCTGTGTTTTTGATGGTTTCTGCAGCGTTGT TGACGATATCCTCTCTTGCTTACTTTCGTTTTCGTTTCAGTAGTGTAAGC TATGTTGCGGTTTGTGTTCCTTCAAGCCACAGGCACCCCTTTGTCACAAT GCTTCCTTACCATTATCTTCTGGAATAGAACCTTGCTTGGAGATACGGAG ATTATCAAGTAGACAAAATACTGAAGTAAGATCTAGCTTTGTGTGGGTCT GTGCACGAGGTCTCTTTCACCCAACCTGCGTGCATGAAGGGGGCGTAGAG TTACCTCAGAACCCGCATCCACTGCAGCAAGAAACCGCCGCAGGTGGCAC TAGGCAGCGTGTAACCTCGGTGCGTTCGAGAGGGGGAAAACATCTCGTGG ACGATTGTCCAAATCGACAGGAGCACCGCTTAGGGGAGTATAGCACAGTA CAGTGCCCCTCTCCCGTACTAATTCCGAATGAGTTATTTTGGTATTTCAG TCTTCGATCGTCGTCGTGGTGCACGCCCCGGAGGCACCTGAGAAGAGAAG GGATCCTGGAACGAAGTAATTACAACATCAGGTCGCCACGAATCCGGTAG CATTTCGTTGAGTGGAGAGCTTTGAACAATACTTGGAAACAGAGGACGGA GCGCGTGAAAAACAGACGCACATAATCTGCTTTGGGCTGGATGTTAAAGT ATGGCTTCACAGCCAGAATCAACGACCAGTAGTGCGTGAGCGTTGTGACG TGAAGTGCAGTAACAGCACTTGGTGTTAAGAGATAGGAGTTTACCAACTT ATACAGTGTTCAGTAGCACAGTATTGCTACAGGCATCACAGCAGTAGAAG CTGTTGAAAGTACAACTATCGATATCCGTACTCTAGACTTTGTAGCAACG TCAGTCACAGCAATAAAAGCGGGCCAGCTT
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Coding sequence (CDS) from alignment at H-paniculata_contig17339:1192..4771+

>mRNA_H-paniculata_contig17339.4081.1 ID=mRNA_H-paniculata_contig17339.4081.1|Name=mRNA_H-paniculata_contig17339.4081.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=612bp|location=Sequence derived from alignment at H-paniculata_contig17339:1192..4771+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCATTCATCTCGATGTATGCATGCTCCAAAGCCGCAGCGGAAATGAT
GATGCCATTCATCTCGATGTATGCATGCTCCAAAGCCGCAGCGGAAATGA
TGGTCAAGTATGGAGCTGTGGAAGGGGCAGCTATGAACGTCCGCGTGAAT
GGTATTGCCCCGGGAACTGTGCGGACACCATTGTCTTTGACGATAGGCGA
GGAAAAGCTTGAGGAAACGTGGAAAAAGACGCACCTCACTGGAAAACCCA
TCATGGTGGAAGACGTCAAGTATGGAGCTGTGGAAGGGGCAGCTATGAAC
GTCCGCGTGAATGGTATTGCCCCGGGAACTGTGCGGACACCATTGTCTTT
GACGATAGGCGAGGAAAAGCTTGAGGAAACGTGGAAAAAGACGCACCTCA
CTGGAAAACCCATCATGGTGGAAGACGTAGTGTCGTTGGTGGTGTTCCTG
CTCAGCGACGGTGCTCAGGTTATGACAGGTTCCATTCATCGCGTCGATCA
AGGCGCATCGTTGATATAAGTAGTGTCGTTGGTGGTGTTCCTGCTCAGCG
ACGGTGCTCAGGTTATGACAGGTTCCATTCATCGCGTCGATCAAGGCGCA
TCGTTGATATAA
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