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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 3263 |
| Cds size | 1842 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig17303.4067.1 >prot_H-paniculata_contig17303.4067.1 ID=prot_H-paniculata_contig17303.4067.1|Name=mRNA_H-paniculata_contig17303.4067.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=614bp
MPTVFAPTATARPQGTPSLIPQMITSNAAIGSVSTAMFTKTSTPRAQPGS
AHGSPNRLEASASSDGLSRFTSLDFRTNIRSPDWPEILQESLAGDGSIDM
STVFAPTATARPQGTLASAIVQGPTSSAGVEKGTMTSKSELFVAVNTVAA
ATTAITDSATSIPKLTSTALAHLQSPGPLAATGTAATILQSPSPTAMRIT
SIGSRRPQPRVSSNTPSPTAKITHTTKINTVLARRFVARKRLNACASPSP
VARLAAILRTPSSSPTFATAAMNKHVTQPDGVASRRSLGTLDPNISPQHE
AFLLQRLSGNKTPSTRGADNVDKLTPGVNSSDSGSKQCTSISKNADGRLA
GSLSAAGVRAGEETAMREPTRVDGRTRCMKGAGGSEENEGEYFPRMMPNG
DFSRDKNLDAFAEMANMVVHPATPRQGSKTLQSIREVLQAENERKAPRKT
KRGLAKAVGKTVAKSVDKTGADRWARQWLSRWARQWLSRWARQWLSRWTR
RGLSRWARQWLSRWARQWLSRWARQWLSRWARQWLSRWTRRGPSRWARQW
LSRWARQWLSRWARQWLSRWTRRGLGRWARQWLRRWARRWLRRWARRWTS
RWTRRGLSRWARQ* back to topmRNA from alignment at H-paniculata_contig17303:155..4594+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig17303.4067.1 ID=mRNA_H-paniculata_contig17303.4067.1|Name=mRNA_H-paniculata_contig17303.4067.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4440bp|location=Sequence derived from alignment at H-paniculata_contig17303:155..4594+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTCCATAGATATGCCGACCGTGTTTGCGCCGACGGCAACCGCAAGACCT
CAGGGCACGCCGAGCCTCATACCGCAGATGATCACTAGCAACGCTGCCAT
TGGCTCTGTATCAACCGCCATGTTTACGAAGACATCGACTCCAAGGGCGC
AGCCAGGATCAGCTCACGGATCGCCGAATAGACTAGAGGCATCTGCTTCG
TCCGACGGGCTCTCTCGCTTCACGTCCCTCGACTTCCGCACGAACATAAG
GTCTCCGGACTGGCCGGAAATTTTGCAGGAGAGCCTCGCCGGAGACGGTT
CCATAGATATGTCGACCGTGTTTGCGCCGACGGCAACCGCAAGACCTCAG
GGTACGCTGGCGAGCGCTATCGTCCAAGGGCCTACTTCTTCTGCAGGTGT
TGAGAAGGGTACGATGACCTCAAAGAGTGAATTGTTTGTCGCCGTGAATA
CTGTTGCCGCTGCTACTACTGCTATTACCGATTCTGCCACTTCAATACCG
AAGCTGACGTCGACAGCTTTGGCACACCTTCAGTCGCCGGGGCCACTGGC
TGCTACTGGAACGGCGGCGACGATCCTCCAGTCCCCATCACCGACGGCGA
TGAGGATCACCAGCATCGGATCACGACGGCCCCAACCACGGGTCAGCAGC
AACACTCCGTCTCCGACGGCCAAGATTACGCATACGACCAAGATCAACAC
GGTGCTTGCCAGGAGGTTCGTCGCTCGCAAAAGGTTGAATGCTTGTGCAA
GTCCTAGCCCGGTTGCCCGACTCGCGGCAATTCTACGCACGCCGTCATCC
TCCCCGACATTCGCCACCGCAGCTATGAACAAGCACGTCACCCAACCCGA
CGGCGTCGCGAGCCGGAGGTCTTTGGGGACCCTAGACCCGAACATATCGC
CGCAGCATGAAGCGTTTCTACTACAACGGCTCTCGGGGAACAAGACGCCA
TCCACACGGGGAGCTGACAATGTCGACAAGTTGACCCCGGGGGTGAACAG
CAGCGACAGCGGTAGCAAGCAGTGCACGAGTATCTCGAAGAACGCAGACG
GGAGGCTCGCCGGGTCCCTCAGCGCGGCCGGCGTAAGGGCGGGTGAAGAA
ACTGCGATGAGAGAGCCGACAAGGGTAGACGGACGGACGCGGTGCATGAA
GGGCGCTGGGGGGAGCGAGGAGAACGAGGGCGAATATTTCCCCAGGTATC
AAACGGATTGACCTCGCTGCCTGCCTACCGACTTAACCAGATAACGCTAC
TTCAGTCGTTCGCAAGGTTAAGTTGAAATCTTGAGGTTGTATAGTCGCAT
CACTGATCACAGAAGGATTACAGCAGAAGTTAGAGCGCGAGGGCAGATTT
GTACTTCGCTTCCTAACGACGTGAGTCGACCAGCAGAGCCCGAGAATGCA
TTACATTGTCGAGCATTTAGTGGTGATAGGTTTGTGTTGGAGGGCCGTTC
TAGGAATAAATTCCCACGTCTATGGACTGAACGTCTCTAGAGAAATACGC
CTGAAGAATACATTTCCTAGCCTACCCTTCCCCTAACCCCAGCGTCCTTC
ATAAATGTGCTAGTACATTCTATTTATTTCCGCTACTAGTAACTTAGCAA
TGTACGCAATGTTACCTTATCTTTAACTCCGCGGCACGAACAGGATGATG
CCCAATGGAGATTTCTCGAGGGACAAGAACTTGGACGCTTTCGCGGAAAT
GGCCAACATGGTGGTGCACCCTGCTACCCCGAGACAGGGTAGCAAAACGC
TGCAGTCGATCAGAGAGGTATTGCAAGCTGAAAACGAGCGCAAGGCGCCT
CGCAAGACGAAGAGGGGGTTGGCTAAGGCAGTGGGCAAGACAGTTGCTAA
GTCGGTGGACAAGACCGGGGCTGAGCCGGTGGGCAAGACAGTGGCTAAGC
CGGTGGGCAAGACAGTGGCTAAGCCGGTGGGCAAGACAGTGGCTAAGCCG
GTGGGCAAGACAGTGGCTAAGCCGGTGGACAAGACGGGGGCTGAGCCGGT
GGGCAAGACAGTGGCTAAGCCGGTGGGCAAGACAGTGGCTAAGCCGGTGG
GCAAGACAGTGGCTAAGTCGGTGGGCAAGACAGTGGCTAAGTCGGTGGAC
AAGACGGGGGCCGAGCCGGTGGGCAAGACAGTGGCTAAGCCGGTGGGCAA
GACAGTGGCTAAGCCGGTGGGCAAGACAGTGGCTAAGTCGGTGGACAAGA
CGGGGGCTGGGCCGGTGGGCAAGACAGTGGCTAAGGCGGTGGGCAAGACG
GTGGCTAAGGCGGTGGGCAAGACGGTGGACAAGTCGGTGGACAAGACGGG
GGCTGAGCCGGTGGGCAAGACAGTGACTAAGGCGGTGGGCAAGACAGTGG
CTAAGGCGGTGGGCAAGACGGTGGCCAAGGCGGTGGGCAAGACGGTGGCT
AAGCCTCCGCTCGCGACCAAGGGCAGGGACGACAGCGTGGCGCCACCGGC
GGCTAAGCCTCCGCTCGCGACCAAGGGCGAGGACGACAGCGTGGCGTCCC
GCGTCAGGTACGGCGACGAGAATACGCTACCAATCAATTGCGTGTAGCAA
CTCTTGAATACTTGTCTTCAAAAATGAAGCAATCGAATATTCCACTGTTC
TCTATTCGCATGCAGGCAACTAAAATGGAACAGGTGGAACCTATCATTGT
GTCATAAATCTAGGCTCTTCTGTAGTGATATACTCCGGCGTATATATATT
TTAATTGGATACAAGTGGAAACAGGCGCTGCAACGACTTGGAAATATCCT
ACTTAATTGTGCTTTAATCGAAGATAATTGGATGGACAAAATTATTCGGT
TTCTATAACGAGTAATCCAATATAGTCAAACTGAAGGGCGCCGTGATTGA
TGTCATTTAAGAATGTCGCGTTTATTGCGTAGATTGTTTTCGGTTTCTCC
GAAGTCGAACATTAATCCGGGGTTAGCTCCTTTTGGACGCATCCATTGCA
TGAGAGTACGAGGGTATGTCGGAGATTGGCGGAGGGACGGTTGTGACTCG
ATATTCATTGATGATGAGGATACGCAGAAATTTCAGTGTATCTACACCCT
GTGACTGTAATATAGCACCAACCACGTGCACGTAGTCCTGATGTAGGGTT
TCCGCGCAGAAAGATGCGGTGCGAAAATTTTTCCACATGAATTTCATGCT
CGATTACATACATACCCATCCCCTGCCTTCCATACCGTGCCCGTTTTCAT
CACATGCGCAGCGCAAGGAGGCGCGCTAACAAGGCATCACGCACCTTGGA
TGTCAAGGATAGGGGAGGGTTCTTCAGGTTCGGTTAACTAGCAAGAATTG
GAGCGAAGCAAAAAAGGGCTAGTGCCCAAAGTCGGGAGTTTGCTGGTATT
TCGTTGACGTGTTGTGATGAATACGTGTATGTCTCAGAACCGCCCCCCAA
GTTTTCTTCTGATCGTAGCAAATAGAGGAATTACGACAACATACGGGTAA
CTTTGCTCGTTCGATAACAAAACAACATAGCCTGTATTCAGTTCATCGGC
ACGGAGTAAACTGAGGGGTTAGAGTTGCACTAGTGTTACCCAGGGGTCAT
GATCCCGTTTTGAGTGTGTGTAGAGCTATTCGTATATGTCCGCGTTTAGG
AAAACCTCGTCAGGACAACCCGAGGTCTACTTGACTCGGCGCTAACTGTT
AGCTCCTGAGGCACGTACACCGCACCGTGAAATCTTCAAGTATTCATTAC
TTATACATGATGCCGCGGAGCATGGGGTGACGCAAGGCATGACAGATGCG
GATGCTACGTACCTATGTATGTGAACCATGTTGGATGTGCGGTGAGGCGG
TTTGCCCGGGGAGCGACGGCAGAAATGGAAGATGTGAAAGGTTTAGTGTG
TCAGCGCTTTGAATTCTCGGAGGAAAACTACGAGAACAGTCACAGTTTTG
GGGGGCGGACAAGGGGACGGGCAGGCGTGGGGGGCCCCAGTAGAATTTGG
TGATATTGAGTCTGGATTGAAATATTGTTGAGTTTGATTGAAAATGTGGT
GATTTACTTTGTTTGACAGTGTGGTGACTTGTCTTTGGGTGAGAGTGTGG
TGGACTTGATTGCGAGTTTGGGTGAGTACAAGTTTACAGTTGGTAGCTTG
GTGAGCTCAATTGAGGGGTTGGCGAATGTAAAGGAGGATTTATGGTCTGT
GTCTCGGTATGAAGGAAGAGTACGATTAAATGCCTAATCGGCACCTTCGG
TTGGCGTGGGTATGTCTACGCCCAACCTGGATAAACTACGAACACACAGA
CTGACCTTATTGGATTTTCCAGTGCCCGGTATTACGGGGAAACGCACGTA
TATCGTAGGCCAGTCGCCTTCGAACTTGGAAAAAGCTCCGCCACAGTACC
TTGTCCACCGTGTTGTTCCTATATTCCTCCACGGAAACAAGGACGTCACG
TTGCCTCAATTGCTGTACACGGTTTTAAATAGAGATCAGC back to topCoding sequence (CDS) from alignment at H-paniculata_contig17303:155..4594+ >mRNA_H-paniculata_contig17303.4067.1 ID=mRNA_H-paniculata_contig17303.4067.1|Name=mRNA_H-paniculata_contig17303.4067.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3684bp|location=Sequence derived from alignment at H-paniculata_contig17303:155..4594+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCGACCGTGTTTGCGCCGACGGCAACCGCAAGACCTCAGGGCACGCC
GAGCCTCATACCGCAGATGATCACTAGCAACGCTGCCATTGGCTCTGTAT
CAACCGCCATGTTTACGAAGACATCGACTCCAAGGGCGCAGCCAGGATCA
GCTCACGGATCGCCGAATAGACTAGAGGCATCTGCTTCGTCCGACGGGCT
CTCTCGCTTCACGTCCCTCGACTTCCGCACGAACATAAGGTCTCCGGACT
GGCCGGAAATTTTGCAGGAGAGCCTCGCCGGAGACGGTTCCATAGATATG
TCGACCGTGTTTGCGCCGACGGCAACCGCAAGACCTCAGGGTACGCTGGC
GAGCGCTATCGTCCAAGGGCCTACTTCTTCTGCAGGTGTTGAGAAGGGTA
CGATGACCTCAAAGAGTGAATTGTTTGTCGCCGTGAATACTGTTGCCGCT
GCTACTACTGCTATTACCGATTCTGCCACTTCAATACCGAAGCTGACGTC
GACAGCTTTGGCACACCTTCAGTCGCCGGGGCCACTGGCTGCTACTGGAA
CGGCGGCGACGATCCTCCAGTCCCCATCACCGACGGCGATGAGGATCACC
AGCATCGGATCACGACGGCCCCAACCACGGGTCAGCAGCAACACTCCGTC
TCCGACGGCCAAGATTACGCATACGACCAAGATCAACACGGTGCTTGCCA
GGAGGTTCGTCGCTCGCAAAAGGTTGAATGCTTGTGCAAGTCCTAGCCCG
GTTGCCCGACTCGCGGCAATTCTACGCACGCCGTCATCCTCCCCGACATT
CGCCACCGCAGCTATGAACAAGCACGTCACCCAACCCGACGGCGTCGCGA
GCCGGAGGTCTTTGGGGACCCTAGACCCGAACATATCGCCGCAGCATGAA
GCGTTTCTACTACAACGGCTCTCGGGGAACAAGACGCCATCCACACGGGG
AGCTGACAATGTCGACAAGTTGACCCCGGGGGTGAACAGCAGCGACAGCG
GTAGCAAGCAGTGCACGAGTATCTCGAAGAACGCAGACGGGAGGCTCGCC
GGGTCCCTCAGCGCGGCCGGCGTAAGGGCGGGTGAAGAAACTGCGATGAG
AGAGCCGACAAGGGTAGACGGACGGACGCGGTGCATGAAGGGCGCTGGGG
GGAGCGAGGAGAACGAGGGCGAATATTTCCCCAGATGCCGACCGTGTTTG
CGCCGACGGCAACCGCAAGACCTCAGGGCACGCCGAGCCTCATACCGCAG
ATGATCACTAGCAACGCTGCCATTGGCTCTGTATCAACCGCCATGTTTAC
GAAGACATCGACTCCAAGGGCGCAGCCAGGATCAGCTCACGGATCGCCGA
ATAGACTAGAGGCATCTGCTTCGTCCGACGGGCTCTCTCGCTTCACGTCC
CTCGACTTCCGCACGAACATAAGGTCTCCGGACTGGCCGGAAATTTTGCA
GGAGAGCCTCGCCGGAGACGGTTCCATAGATATGTCGACCGTGTTTGCGC
CGACGGCAACCGCAAGACCTCAGGGTACGCTGGCGAGCGCTATCGTCCAA
GGGCCTACTTCTTCTGCAGGTGTTGAGAAGGGTACGATGACCTCAAAGAG
TGAATTGTTTGTCGCCGTGAATACTGTTGCCGCTGCTACTACTGCTATTA
CCGATTCTGCCACTTCAATACCGAAGCTGACGTCGACAGCTTTGGCACAC
CTTCAGTCGCCGGGGCCACTGGCTGCTACTGGAACGGCGGCGACGATCCT
CCAGTCCCCATCACCGACGGCGATGAGGATCACCAGCATCGGATCACGAC
GGCCCCAACCACGGGTCAGCAGCAACACTCCGTCTCCGACGGCCAAGATT
ACGCATACGACCAAGATCAACACGGTGCTTGCCAGGAGGTTCGTCGCTCG
CAAAAGGTTGAATGCTTGTGCAAGTCCTAGCCCGGTTGCCCGACTCGCGG
CAATTCTACGCACGCCGTCATCCTCCCCGACATTCGCCACCGCAGCTATG
AACAAGCACGTCACCCAACCCGACGGCGTCGCGAGCCGGAGGTCTTTGGG
GACCCTAGACCCGAACATATCGCCGCAGCATGAAGCGTTTCTACTACAAC
GGCTCTCGGGGAACAAGACGCCATCCACACGGGGAGCTGACAATGTCGAC
AAGTTGACCCCGGGGGTGAACAGCAGCGACAGCGGTAGCAAGCAGTGCAC
GAGTATCTCGAAGAACGCAGACGGGAGGCTCGCCGGGTCCCTCAGCGCGG
CCGGCGTAAGGGCGGGTGAAGAAACTGCGATGAGAGAGCCGACAAGGGTA
GACGGACGGACGCGGTGCATGAAGGGCGCTGGGGGGAGCGAGGAGAACGA
GGGCGAATATTTCCCCAGGATGATGCCCAATGGAGATTTCTCGAGGGACA
AGAACTTGGACGCTTTCGCGGAAATGGCCAACATGGTGGTGCACCCTGCT
ACCCCGAGACAGGGTAGCAAAACGCTGCAGTCGATCAGAGAGGTATTGCA
AGCTGAAAACGAGCGCAAGGCGCCTCGCAAGACGAAGAGGGGGTTGGCTA
AGGCAGTGGGCAAGACAGTTGCTAAGTCGGTGGACAAGACCGGGGCTGAG
ATGATGCCCAATGGAGATTTCTCGAGGGACAAGAACTTGGACGCTTTCGC
GGAAATGGCCAACATGGTGGTGCACCCTGCTACCCCGAGACAGGGTAGCA
AAACGCTGCAGTCGATCAGAGAGGTATTGCAAGCTGAAAACGAGCGCAAG
GCGCCTCGCAAGACGAAGAGGGGGTTGGCTAAGGCAGTGGGCAAGACAGT
TGCTAAGTCGGTGGACAAGACCGGGGCTGACCGGTGGGCAAGACAGTGGC
TAAGCCGGTGGGCAAGACAGTGGCTAAGCCGGTGGGCAAGACAGTGGCTA
AGCCGGTGGACAAGACGGGGGCTGAGCCGGTGGGCAAGACAGTGGCTAAG
CCGGTGGGCAAGACAGTGGCTAAGCCGGTGGGCAAGACAGTGGCTAAGTC
GGTGGGCAAGACAGTGGCTAAGTCGGTGGACAAGACGGGGGCCGAGCCGG
TGGGCAAGACAGTGGCTAAGCCGGTGGGCAAGACAGTGGCTAAGCCGGTG
GGCAAGACAGTGGCTAAGTCGGTGGACAAGACGGGGGCTGGGCCGGTGGG
CAAGACAGTGGCTAAGGCGGTGGGCAAGACGGTGGCTAAGGCGGTGGGCA
AGACGGTGGACAAGTCGGTGGACAAGACGGGGGCTGAGCCGGTGGGCAAG
ACAGTGACCGGTGGGCAAGACAGTGGCTAAGCCGGTGGGCAAGACAGTGG
CTAAGCCGGTGGGCAAGACAGTGGCTAAGCCGGTGGACAAGACGGGGGCT
GAGCCGGTGGGCAAGACAGTGGCTAAGCCGGTGGGCAAGACAGTGGCTAA
GCCGGTGGGCAAGACAGTGGCTAAGTCGGTGGGCAAGACAGTGGCTAAGT
CGGTGGACAAGACGGGGGCCGAGCCGGTGGGCAAGACAGTGGCTAAGCCG
GTGGGCAAGACAGTGGCTAAGCCGGTGGGCAAGACAGTGGCTAAGTCGGT
GGACAAGACGGGGGCTGGGCCGGTGGGCAAGACAGTGGCTAAGGCGGTGG
GCAAGACGGTGGCTAAGGCGGTGGGCAAGACGGTGGACAAGTCGGTGGAC
AAGACGGGGGCTGAGCCGGTGGGCAAGACAGTGA back to top
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