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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 1165 |
| Cds size | 1164 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1675.3806.1 >prot_H-paniculata_contig1675.3806.1 ID=prot_H-paniculata_contig1675.3806.1|Name=mRNA_H-paniculata_contig1675.3806.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=388bp
SHQSTPTWHTDGNSVHLQPPIYHQPQAHHQLHLPQPLQLPQLYQQPFQQP
QQPHYGGGGYIASPSPHSHLGPPLPPPLPPPLPPGPPPPPVILPVSPPAT
PPIAAGGGSPVQLSRANLHSGSQPSQSNSLSPHQKGNGRSSFPSLKTARE
VAAGSGFGGSGDGGASSPRSGEKFYSGGGESSYKSPHSSSFSSSKKSSSS
GGDGGNRSRSDGVYISGGGQHSHSDNVYVSGGNSKNSSNSSSRRNNGRNS
HGGGVMGGSITTAAAAAALKYYNSSSSGQFTSSRSDDYRGSSSGGDARRY
SVGGVSSGGSGTRSETRNWDSYRVGGSGGGGGRSRSKKDRRHSSDGMRPQ
QSGSYHDDGSRRGGASRADRGGSYGGGGHSSQKSHRR* back to topmRNA from alignment at H-paniculata_contig1675:22534..23697+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1675.3806.1 ID=mRNA_H-paniculata_contig1675.3806.1|Name=mRNA_H-paniculata_contig1675.3806.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1164bp|location=Sequence derived from alignment at H-paniculata_contig1675:22534..23697+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCCACCAATCTACCCCAACGTGGCATACAGACGGAAACAGCGTGCATTT
GCAACCACCGATATATCATCAGCCACAGGCACATCATCAGCTTCACCTCC
CACAACCACTCCAGCTACCACAACTATACCAACAGCCGTTTCAGCAGCCA
CAACAACCCCATTACGGTGGTGGTGGATACATAGCAAGCCCAAGTCCACA
CTCTCATCTGGGTCCTCCCCTGCCTCCGCCTCTGCCCCCCCCGCTTCCTC
CGGGGCCTCCACCACCGCCGGTGATTCTCCCTGTTTCGCCTCCGGCCACG
CCTCCTATTGCGGCCGGGGGTGGGTCTCCGGTGCAATTATCAAGGGCAAA
TTTGCATTCGGGATCGCAGCCTAGCCAAAGCAATAGCTTGAGTCCACACC
AGAAAGGCAATGGTCGGTCTTCATTCCCATCCTTGAAAACAGCTCGTGAA
GTGGCTGCTGGCTCAGGATTTGGTGGCAGCGGCGACGGTGGGGCATCATC
TCCAAGGAGCGGCGAAAAATTCTATTCAGGTGGTGGTGAATCCAGCTACA
AGTCTCCGCATTCGTCGTCGTTTTCTTCCTCGAAAAAGAGTAGCAGCAGT
GGTGGCGATGGTGGTAATCGCTCGCGCAGCGACGGCGTTTACATTTCCGG
TGGTGGCCAACACTCGCACAGCGACAATGTTTACGTTTCCGGTGGCAACA
GTAAAAACAGCAGCAATAGTAGTAGTCGCCGTAACAACGGCAGGAACTCG
CACGGGGGCGGGGTGATGGGGGGGTCTATCACAACAGCAGCAGCAGCTGC
AGCTCTGAAATATTACAATAGCAGCAGCAGCGGTCAATTTACATCCTCTC
GGAGCGACGACTACCGTGGCAGTAGTAGTGGTGGTGACGCTCGCAGATAC
TCCGTTGGAGGTGTTAGCAGCGGCGGTAGTGGGACACGGAGCGAGACACG
GAATTGGGATTCTTATAGGGTCGGCGGCAGCGGCGGCGGCGGCGGGCGAT
CCAGGAGCAAAAAGGATCGCCGACATTCCAGTGATGGGATGCGTCCTCAG
CAATCAGGAAGTTACCATGACGACGGGTCACGGCGGGGTGGAGCCAGCAG
GGCTGACCGGGGCGGGAGCTATGGCGGGGGGGGGCATTCAAGCCAAAAGA
GCCACAGGCGCTAG back to topCoding sequence (CDS) from alignment at H-paniculata_contig1675:22534..23697+ >mRNA_H-paniculata_contig1675.3806.1 ID=mRNA_H-paniculata_contig1675.3806.1|Name=mRNA_H-paniculata_contig1675.3806.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2328bp|location=Sequence derived from alignment at H-paniculata_contig1675:22534..23697+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCCACCAATCTACCCCAACGTGGCATACAGACGGAAACAGCGTGCATTT
GCAACCACCGATATATCATCAGCCACAGGCACATCATCAGCTTCACCTCC
CACAACCACTCCAGCTACCACAACTATACCAACAGCCGTTTCAGCAGCCA
CAACAACCCCATTACGGTGGTGGTGGATACATAGCAAGCCCAAGTCCACA
CTCTCATCTGGGTCCTCCCCTGCCTCCGCCTCTGCCCCCCCCGCTTCCTC
CGGGGCCTCCACCACCGCCGGTGATTCTCCCTGTTTCGCCTCCGGCCACG
CCTCCTATTGCGGCCGGGGGTGGGTCTCCGGTGCAATTATCAAGGGCAAA
TTTGCATTCGGGATCGCAGCCTAGCCAAAGCAATAGCTTGAGTCCACACC
AGAAAGGCAATGGTCGGTCTTCATTCCCATCCTTGAAAACAGCTCGTGAA
GTGGCTGCTGGCTCAGGATTTGGTGGCAGCGGCGACGGTGGGGCATCATC
TCCAAGGAGCGGCGAAAAATTCTATTCAGGTGGTGGTGAATCCAGCTACA
AGTCTCCGCATTCGTCGTCGTTTTCTTCCTCGAAAAAGAGTAGCAGCAGT
GGTGGCGATGGTGGTAATCGCTCGCGCAGCGACGGCGTTTACATTTCCGG
TGGTGGCCAACACTCGCACAGCGACAATGTTTACGTTTCCGGTGGCAACA
GTAAAAACAGCAGCAATAGTAGTAGTCGCCGTAACAACGGCAGGAACTCG
CACGGGGGCGGGGTGATGGGGGGGTCTATCACAACAGCAGCAGCAGCTGC
AGCTCTGAAATATTACAATAGCAGCAGCAGCGGTCAATTTACATCCTCTC
GGAGCGACGACTACCGTGGCAGTAGTAGTGGTGGTGACGCTCGCAGATAC
TCCGTTGGAGGTGTTAGCAGCGGCGGTAGTGGGACACGGAGCGAGACACG
GAATTGGGATTCTTATAGGGTCGGCGGCAGCGGCGGCGGCGGCGGGCGAT
CCAGGAGCAAAAAGGATCGCCGACATTCCAGTGATGGGATGCGTCCTCAG
CAATCAGGAAGTTACCATGACGACGGGTCACGGCGGGGTGGAGCCAGCAG
GGCTGACCGGGGCGGGAGCTATGGCGGGGGGGGGCATTCAAGCCAAAAGA
GCCACAGGCGCTAGAGCCACCAATCTACCCCAACGTGGCATACAGACGGA
AACAGCGTGCATTTGCAACCACCGATATATCATCAGCCACAGGCACATCA
TCAGCTTCACCTCCCACAACCACTCCAGCTACCACAACTATACCAACAGC
CGTTTCAGCAGCCACAACAACCCCATTACGGTGGTGGTGGATACATAGCA
AGCCCAAGTCCACACTCTCATCTGGGTCCTCCCCTGCCTCCGCCTCTGCC
CCCCCCGCTTCCTCCGGGGCCTCCACCACCGCCGGTGATTCTCCCTGTTT
CGCCTCCGGCCACGCCTCCTATTGCGGCCGGGGGTGGGTCTCCGGTGCAA
TTATCAAGGGCAAATTTGCATTCGGGATCGCAGCCTAGCCAAAGCAATAG
CTTGAGTCCACACCAGAAAGGCAATGGTCGGTCTTCATTCCCATCCTTGA
AAACAGCTCGTGAAGTGGCTGCTGGCTCAGGATTTGGTGGCAGCGGCGAC
GGTGGGGCATCATCTCCAAGGAGCGGCGAAAAATTCTATTCAGGTGGTGG
TGAATCCAGCTACAAGTCTCCGCATTCGTCGTCGTTTTCTTCCTCGAAAA
AGAGTAGCAGCAGTGGTGGCGATGGTGGTAATCGCTCGCGCAGCGACGGC
GTTTACATTTCCGGTGGTGGCCAACACTCGCACAGCGACAATGTTTACGT
TTCCGGTGGCAACAGTAAAAACAGCAGCAATAGTAGTAGTCGCCGTAACA
ACGGCAGGAACTCGCACGGGGGCGGGGTGATGGGGGGGTCTATCACAACA
GCAGCAGCAGCTGCAGCTCTGAAATATTACAATAGCAGCAGCAGCGGTCA
ATTTACATCCTCTCGGAGCGACGACTACCGTGGCAGTAGTAGTGGTGGTG
ACGCTCGCAGATACTCCGTTGGAGGTGTTAGCAGCGGCGGTAGTGGGACA
CGGAGCGAGACACGGAATTGGGATTCTTATAGGGTCGGCGGCAGCGGCGG
CGGCGGCGGGCGATCCAGGAGCAAAAAGGATCGCCGACATTCCAGTGATG
GGATGCGTCCTCAGCAATCAGGAAGTTACCATGACGACGGGTCACGGCGG
GGTGGAGCCAGCAGGGCTGACCGGGGCGGGAGCTATGGCGGGGGGGGGCA
TTCAAGCCAAAAGAGCCACAGGCGCTAG back to top
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