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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1872 |
| Cds size | 1464 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16742.3802.1 >prot_H-paniculata_contig16742.3802.1 ID=prot_H-paniculata_contig16742.3802.1|Name=mRNA_H-paniculata_contig16742.3802.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=488bp
MPPARGGGKGTAAATRRAAAATAGGGTVETAGSNGDCTPTRSTRVTRARK
SPAISPGTSPVAPTAVAGDASTKSSPSVSDEGGTGDVAAGIDDPIDQGGE
QQQFSGETESAKGEREDSSGVDDASAAVVAVMAKEGVATETNGELLVAPA
SELITQAPASSGFAPEENGVSAEPSSVEAPTSMDLGSPNTDGDVDAAPQE
ADDESGGDATVAQGGDGINAEGGGSTAKTMGGDGGGDTTDSEDAGATAVD
ALTLPMESTSSTPQDTSPADDIMDTSEITTAAAAASTGMVETDDNPDQPA
ATPASTDNSSVGLADTSQATAVTAGAADGDAVANADDTATDAAPAGTAPG
TSPGPSTPTAVAAGGGRNQKKRGGKGGGKAGGGKMKGRWSAETTAVAPAA
GVVQPSAAAAAEAVAVAAAAANGLVLMANNLDVKRTADFMLAAKGQSYKA
ARYVGQSRSLCRAMYAPLSPHVVCNVCFCACTRSLGL* back to topmRNA from alignment at H-paniculata_contig16742:47..5092- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig16742.3802.1 ID=mRNA_H-paniculata_contig16742.3802.1|Name=mRNA_H-paniculata_contig16742.3802.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5046bp|location=Sequence derived from alignment at H-paniculata_contig16742:47..5092- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTCGGTTATTGGGCTGTCAAGGGCTTGTTGACCCTCGGCAAAACCAAAGA
CAGACGAAACACACATAGAGGGAGTGCAACACCGTGCTACTGCCCTCCCG
TAAACTTTTACTGTAGGCACGAGTCTACCGACGTAGTAAAAGAAAAGACA
ACTGTGCATCTTACACCCAAAACGCAGTGCTGCACAGGAGCACCAGGCAG
GGCGACCCCACTAATTTTTCAGGGTCATCGAGAAAGCAACTATGCCACCC
GCACGTGGTGGAGGTAAGGGAACTGCGGCCGCGACCAGACGCGCGGCGGC
CGCCACTGCCGGGGGCGGAACGGTAGAAACCGCCGGCTCCAATGGTGACT
GCACACCTACGCGAAGCACCCGTGTCACGCGTGCACGCAAGAGCCCCGCG
ATATCACCGGGGACATCACCTGTAGCTCCGACCGCTGTTGCTGGGGACGC
ATCCACGAAATCTTCACCTTCTGTAAGTGATGAGGGAGGGACGGGTGATG
TGGCAGCGGGTATTGATGATCCAATCGATCAAGGCGGTGAGCAACAGCAA
TTCTCTGGAGAGACCGAATCTGCCAAGGGAGAACGAGAGGATAGCAGTGG
TGTCGATGATGCTTCGGCGGCGGTGGTGGCGGTCATGGCGAAAGAGGGGG
TGGCAACAGAGACCAATGGCGAATTACTTGTAGCTCCTGCCTCAGAGCTC
ATCACTCAAGCACCAGCATCCTCAGGGTTTGCCCCCGAAGAAAATGGCGT
CTCAGCAGAGCCATCTTCAGTGGAAGCGCCGACCTCCATGGATCTGGGAT
CCCCCAACACGGATGGTGATGTCGATGCCGCCCCCCAGGAAGCGGATGAT
GAATCCGGGGGGGATGCTACGGTTGCACAAGGTGGCGATGGGATCAACGC
TGAGGGTGGAGGGTCCACAGCGAAGACCATGGGTGGCGACGGCGGGGGAG
ACACCACGGATTCGGAAGACGCGGGGGCAACCGCCGTGGACGCGCTGACC
CTTCCGATGGAGTCAACGTCCTCCACACCTCAAGATACATCCCCGGCGGA
TGATATAATGGATACTTCCGAGATTACGACGGCAGCAGCAGCAGCATCAA
CTGGCATGGTAGAAACGGACGACAATCCTGACCAACCTGCTGCCACCCCT
GCAAGTACCGACAACAGCAGTGTGGGTCTTGCTGATACCTCTCAGGCAAC
AGCTGTCACCGCTGGAGCAGCAGACGGGGACGCCGTAGCCAACGCGGATG
ACACGGCGACGGACGCTGCGCCGGCGGGAACGGCTCCCGGAACCTCACCC
GGCCCCTCCACACCGACGGCCGTAGCTGCTGGCGGCGGAAGAAATCAAAA
GAAAAGAGGTGGCAAGGGTGGAGGGAAGGCTGGGGGAGGCAAGATGAAAG
GTCGCTGGTCTGCCGAGACAACTGCTGTTGCTCCTGCTGCGGGTGTGGTG
CAACCTTCCGCAGCGGCCGCTGCCGAGGCCGTTGCTGTCGCGGCTGCTGC
TGCTAATGGCCTGGTTTTGATGGCCAACAATCTTGACGTGAAGGTGAGAC
TTGATTAAGTAGGTGATGTAATTGAGGACGTGTCGACACGGAATGTAGAT
GCCCATGAAATGATGACAAAACGTTCATGTCATGGGCCTGCGGTTGAGTA
CAAAAACCTAGAGACGAAGGAAAAAAAAAACACAATGGGCGTGATGGCTT
CAATCCGGTCCAGTATGTCTCACTTCACTTTAGCTTGCGGAACGTTTCGC
GGGCTGTTGTGAGACATAAAAATTTTCGCGCTTGGTGACGACCACAGTTA
CCTTCACTTGCTTCTTGTTCGATCTGGGGTGTGGGTCGGGTTGCGTCAAC
GCGATGAGGTATCAGTTCCGTACTGCTTGCCTCTGGACAAGAAATTCCAG
TCACTATCCTGTGGTAGATATTGATGACGTGTGCTTTACCGTGTGAAGGT
GGTTGGGGGGTAGACCGCCTCTATCGACCGAGGGGACCAAGTGCGGTTAG
ATCCACCTCCGTCGGAGTACTACCCCCACAACAGCGAAAACGCAGCTATT
AATCTCTGGGTTTATTTAATGTTGTTCTGCAACCGGATCCCCGTCGCGCG
CGGAGAAGCACCTCTTGGAACCCCTTCTCAAGATGAACGTGGTCTGAAGA
GCAGAGTCCGATAGAGATACGACCCGGATCCCACTGGACTAGCCTTGCCT
GTTTGTACGATAGGGCCCCCTCTGCCCCCCAGAACCCCATCCTTTTGAGC
ATAACTATACAAGCTCAGGAATCTAACTAACATCAGCCCAATGTCAACCA
AATCGTCGAGCTGTTTTATATTGCAGAGCTGGTGCTTGCTTGCCACTACA
GGTTTACTGTGGAATTGGCCCTTGGTCGGGATTGGGTTCCTCTTTGTGGC
GTGGCCCGTGAGTTATGTGTTTATTATGTATTTTTTGCGTCCATATGTGA
ATGGAAACGGGTTTAGATGCGACAAATGACCTCGTTGGAAGTTCCATCAA
CTGAGTCCTTTCATCGCGCAGCGGCAGGTAAACACTTGGATACAATATCT
AGGCAGTGCCGATGACTCGAGAGGTTTTGTAATTCCCGGTAATGATTTCT
TTCATTGTCAATCTACACAAAAATCTCGGCGTCCGTTACCGTTGTTCCAT
CAGATGTAGTCGAAATCTGTCGATAGACGTGAGCCCTGTTCGACCGTACA
TTGCCTCCTCTTCATTCTCCTCTTCATTATCGACATACTCGAGTGAAGAA
AACTGTCGACCACAGTGCTCAACACCATAAACTACAGTACAGAGAACAAA
CGCAGCAGCAGCAGCAGGCGCGATCGCTGTTCGATGTCCCTAGAACGTTG
GGTTTTGAGTCTGATCTAAGCAAAGGTCGAACCCGTCTACTACCGTGTAC
CACACTCGGCCCGTGTGTATGGTGTCTGTCAACCCTATCTTCTACACACA
GCGTCTTGCTTCCTCGTTTTACTAGTGTCCGCACGCCACAGTCTCGATTC
CCAGGTCTGAACCCACCCCACCACCCCCCTTCGCTCGGATCCTGTATGTA
CACCTGTCATAGATGACAGTCGGCCTCGTTCCGCTCAGGTCTTACCGTGA
GATCGTACGCATTGAAAGAAGTCGATGCTTCGCTTGTTATTTTCACATAT
TCTGATGATGCTGACCAGAGTCGCGGTGAGAGGGTAGGAGGCCCCGAAAA
CTGATAGAAGAGTAAATAAATACATGCTGAACTTGCTACGAGGCATTTTT
TCCGCTGTAATGTTTTCATTCCGTGTTGAACAGATTTTCTTGATGAAACT
ACAGTGCTCGTTGCGCTGAATGTTGCGTCATTCGAAAGATCTTGTGGAGA
CACATTTGTCATGAAATAGAATACATGAGTACGCCACCTCTATCCGGGCT
TCCTTCGGCGCAAGATCCGCACGGGTGGAATAAGCTACCGACGGTGGTCG
AACAGGTGGCTTGTGTTCTTGCGTTCGCTGCCACTCCGCTGGGTTCAGTA
TCCGTGGTATTTGCCCCCCCGCGGCTCCACTGTTTGAGCGGGTTAAGTTG
ACAATTTGGATCCGGGAAGATGAAGCCCTGCCGACTGCTGTCGGCTGCGA
TCGGGCCAGAGATGTGGTGTGGTTTGAGCGTGGGTGGGACAGACGTCGTG
AGATGTTTCTGCTTGGATCTGGCTATTTTGTCGGCTCTAAGTGCGTGTGC
GCCGGCTTTCATATTGCATCTATATTGGCACGTGTTTGTGGCTGACACGC
ACTCTGCACGCACGCTGATTGCATGTGAACGACCTCGGGTCTGACCGATG
AAAGTGAGGTAATTGCACGGGAAGAAGAAAAAGCTGCAACGAGAGGAGTG
ACTCGGAAGGTTCTGATCTTGTGCAGCGGCGAATGAATGGGGGACCGTTT
TTCGGTTGCGCTTTTTGGCCGCTATTCTGTCCTTTACTTTATTTCCTCAG
GCGAAATCTGTGCGTTATAACTGATTTTCTTGCGAAGCCAACAGATTCGC
GACGCGCGGCCAGTCGTCCAGATAGCCTCTTCTTGGTCGAAGGCTGCTGC
AACGAAAGCTCCCCGGAAAGAATCACACGTCCGCGTGGGGATGGCGACCT
CTTGGAGCTGCGACATGAGAACTACAGAAGATGAACCAAGATCCACCTTT
TCACATGCATTCACCCCGCGTCCTGGATATATCTTGAAATACGTCATGCT
TCCCCCCCTCGCCTATTTCACATCTCTCGTTCTTGACTTCTAGCCTCTGA
CAGCGGGCCTTAGCAGTCGGACTAGCGTGTTCCATGATACAATAAAGTGA
GAGTACCAATATTGCACGACACGATACTTAGGTCTTCCTTTGTCCTCACG
TGCCCCTCCCCTCTTTTTGCCCTCGCTCGCTCATCCTCGTGTACTGCTCC
GATGCTGCTGCTCCCGGGAATATTCTGGGAATCGTTTCGGAACAAACGTT
TCGATTCCCCCGCTCCCTATTTCTCTTCGGGAACGTCGTCGTCGTCGTCT
TCTTGCGTTGGAAAAATTACAATCGTGGATTTTCGAACATCCCGTCTTGG
TGTACATGAATCCCTGTCTCACCACATGTGGGGCGAATCTGCTCATGCTG
AATGTGGACGCCCGGGACCCGTGATGTTATCTCCCGGCTCACATGCACAC
CCCGTAAACCGTGTGGTGTATACCGCGAATCGTGGCTATATGCTGTATTG
TCATCGCGTGTGGCCAGCGTACCGCGGACTTCATGCTGGCCGCTAAGGGT
CAGAGCTACAAGGCGGCGAGGTATGTCGGACAATCTCGCTCTCTCTGTCG
GGCTATGTACGCCCCCCTATCCCCTCATGTCGTTTGCAATGTCTGCTTTT
GTGCATGCACGCGGTCTTTGGGTCTATGAAAAACACGGCTACATGCTCGC
GTACGTCTCAGCATTGGCCCCACCCTTGGGAACGGTTTTACTTCTCGGTT
TGAGTTTTCCTCTACAACATGGTACGTGGTTGGATTGCGAGTTCTAAACT
GTTTTTTTTTTGTAAGTATTGTTTTGCTCGCTGTCCCCTTCCTCCC back to topCoding sequence (CDS) from alignment at H-paniculata_contig16742:47..5092- >mRNA_H-paniculata_contig16742.3802.1 ID=mRNA_H-paniculata_contig16742.3802.1|Name=mRNA_H-paniculata_contig16742.3802.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2928bp|location=Sequence derived from alignment at H-paniculata_contig16742:47..5092- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCACCCGCACGTGGTGGAGGTAAGGGAACTGCGGCCGCGACCAGACG
CGCGGCGGCCGCCACTGCCGGGGGCGGAACGGTAGAAACCGCCGGCTCCA
ATGGTGACTGCACACCTACGCGAAGCACCCGTGTCACGCGTGCACGCAAG
AGCCCCGCGATATCACCGGGGACATCACCTGTAGCTCCGACCGCTGTTGC
TGGGGACGCATCCACGAAATCTTCACCTTCTGTAAGTGATGAGGGAGGGA
CGGGTGATGTGGCAGCGGGTATTGATGATCCAATCGATCAAGGCGGTGAG
CAACAGCAATTCTCTGGAGAGACCGAATCTGCCAAGGGAGAACGAGAGGA
TAGCAGTGGTGTCGATGATGCTTCGGCGGCGGTGGTGGCGGTCATGGCGA
AAGAGGGGGTGGCAACAGAGACCAATGGCGAATTACTTGTAGCTCCTGCC
TCAGAGCTCATCACTCAAGCACCAGCATCCTCAGGGTTTGCCCCCGAAGA
AAATGGCGTCTCAGCAGAGCCATCTTCAGTGGAAGCGCCGACCTCCATGG
ATCTGGGATCCCCCAACACGGATGGTGATGTCGATGCCGCCCCCCAGGAA
GCGGATGATGAATCCGGGGGGGATGCTACGGTTGCACAAGGTGGCGATGG
GATCAACGCTGAGGGTGGAGGGTCCACAGCGAAGACCATGGGTGGCGACG
GCGGGGGAGACACCACGGATTCGGAAGACGCGGGGGCAACCGCCGTGGAC
GCGCTGACCCTTCCGATGGAGTCAACGTCCTCCACACCTCAAGATACATC
CCCGGCGGATGATATAATGGATACTTCCGAGATTACGACGGCAGCAGCAG
CAGCATCAACTGGCATGGTAGAAACGGACGACAATCCTGACCAACCTGCT
GCCACCCCTGCAAGTACCGACAACAGCAGTGTGGGTCTTGCTGATACCTC
TCAGGCAACAGCTGTCACCGCTGGAGCAGCAGACGGGGACGCCGTAGCCA
ACGCGGATGACACGGCGACGGACGCTGCGCCGGCGGGAACGGCTCCCGGA
ACCTCACCCGGCCCCTCCACACCGACGGCCGTAGCTGCTGGCGGCGGAAG
AAATCAAAAGAAAAGAGGTGGCAAGGGTGGAGGGAAGGCTGGGGGAGGCA
AGATGAAAGGTCGCTGGTCTGCCGAGACAACTGCTGTTGCTCCTGCTGCG
GGTGTGGTGCAACCTTCCGCAGCGGCCGCTGCCGAGGCCGTTGCTGTCGC
GGCTGCTGCTGCTAATGGCCTGGTTTTGATGGCCAACAATCTTGACGTGA
AGATGCCACCCGCACGTGGTGGAGGTAAGGGAACTGCGGCCGCGACCAGA
CGCGCGGCGGCCGCCACTGCCGGGGGCGGAACGGTAGAAACCGCCGGCTC
CAATGGTGACTGCACACCTACGCGAAGCACCCGTGTCACGCGTGCACGCA
AGAGCCCCGCGATATCACCGGGGACATCACCTGTAGCTCCGACCGCTGTT
GCTGGGGACGCATCCACGAAATCTTCACCTTCTGTAAGTGATGAGGGAGG
GACGGGTGATGTGGCAGCGGGTATTGATGATCCAATCGATCAAGGCGGTG
AGCAACAGCAATTCTCTGGAGAGACCGAATCTGCCAAGGGAGAACGAGAG
GATAGCAGTGGTGTCGATGATGCTTCGGCGGCGGTGGTGGCGGTCATGGC
GAAAGAGGGGGTGGCAACAGAGACCAATGGCGAATTACTTGTAGCTCCTG
CCTCAGAGCTCATCACTCAAGCACCAGCATCCTCAGGGTTTGCCCCCGAA
GAAAATGGCGTCTCAGCAGAGCCATCTTCAGTGGAAGCGCCGACCTCCAT
GGATCTGGGATCCCCCAACACGGATGGTGATGTCGATGCCGCCCCCCAGG
AAGCGGATGATGAATCCGGGGGGGATGCTACGGTTGCACAAGGTGGCGAT
GGGATCAACGCTGAGGGTGGAGGGTCCACAGCGAAGACCATGGGTGGCGA
CGGCGGGGGAGACACCACGGATTCGGAAGACGCGGGGGCAACCGCCGTGG
ACGCGCTGACCCTTCCGATGGAGTCAACGTCCTCCACACCTCAAGATACA
TCCCCGGCGGATGATATAATGGATACTTCCGAGATTACGACGGCAGCAGC
AGCAGCATCAACTGGCATGGTAGAAACGGACGACAATCCTGACCAACCTG
CTGCCACCCCTGCAAGTACCGACAACAGCAGTGTGGGTCTTGCTGATACC
TCTCAGGCAACAGCTGTCACCGCTGGAGCAGCAGACGGGGACGCCGTAGC
CAACGCGGATGACACGGCGACGGACGCTGCGCCGGCGGGAACGGCTCCCG
GAACCTCACCCGGCCCCTCCACACCGACGGCCGTAGCTGCTGGCGGCGGA
AGAAATCAAAAGAAAAGAGGTGGCAAGGGTGGAGGGAAGGCTGGGGGAGG
CAAGATGAAAGGTCGCTGGTCTGCCGAGACAACTGCTGTTGCTCCTGCTG
CGGGTGTGGTGCAACCTTCCGCAGCGGCCGCTGCCGAGGCCGTTGCTGTC
GCGGCTGCTGCTGCTAATGGCCTGGTTTTGATGGCCAACAATCTTGACGT
GAAGCGTACCGCGGACTTCATGCTGGCCGCTAAGGGTCAGAGCTACAAGG
CGGCGAGGTATGTCGGACAATCTCGCTCTCTCTGTCGGGCTATGTACGCC
CCCCTATCCCCTCATGTCGTTTGCAATGTCTGCTTTTGTGCATGCACGCG
GTCTTTGGGTCTATGACGTACCGCGGACTTCATGCTGGCCGCTAAGGGTC
AGAGCTACAAGGCGGCGAGGTATGTCGGACAATCTCGCTCTCTCTGTCGG
GCTATGTACGCCCCCCTATCCCCTCATGTCGTTTGCAATGTCTGCTTTTG
TGCATGCACGCGGTCTTTGGGTCTATGA back to top
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