mRNA_H-paniculata_contig1674.3801.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1674.3801.1
Unique NamemRNA_H-paniculata_contig1674.3801.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig1674.3801.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 280 bits (715), Expect = 7.860e-84
Identity = 172/433 (39.72%), Postives = 233/433 (53.81%), Query Frame = 2
Query:  251 AEREDYDESRVKRRQRVYP*KHYRPSAWATMLR------CDSLGDPSSSTARQFRRRFRVPHMFFLGLVSLAEK--WFHSAAGDVAGHAGIPLKLKVLAVLQVLDRGNCFDDISQMPLMSESTAQATFHKFCKNFSAELFDEHIFLPTGQALEKIIHEYGGSGFTAAVGSTDVTDIEWDCCLCIFARSYTGKEGFATIAYQATADHSGRVLAVTKGFPRATNDKSIIRFDLAVQMVCEDSM*RDRTFRLYSGDATAHGRSTRVSIYLWTVGIINGLCSCPLRSAPYVARRRAGARRWRVYERMWSASLVS*RAALES-----SNSLSSTXXXXXXXXXXXXXXXXXXXXILHNMLHAHDGLDMLEEDADWTGMDGLHDPEVVDPETDHSRVGIRHNIGGSEVQGVEPDYHVPKKKLIAHFSYRRQMNDITLLT 1510
            +E E+ D   +KRR RVYP K Y  S WA  L+       D + DP+S  AR+FR  FR+P+ FF+ LV+L ++  WF +   D +G  GIP++LKVLA LQ+L RGNCF DI  M  +S  TA ATFH+F + F+ E++ EHIFLPTG   +K++ +Y   GF+ A GSTDVT I W  C    ARSYTGKEG+ T+AYQ T DH+ RVLAVT GF  +TNDKSIIR+D AV  + ED +  ++ F +Y  D T +    +    L   G    +   P    P      A ++R           L S R  +E                                 ILHNMLH++D    +EE+ +W G  GLH+    +P  D S VG + +   +E   VE  ++  +K+LIA F YR+  NDI  L+
Sbjct:   64 SEEEEEDNREIKRR-RVYPRKDYNISGWAIQLQELKDLEVDGIVDPTSRPARRFRESFRLPYPFFVELVALVKQRDWFPTGKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPY--QLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKR-----------LESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWLS 482          
BLAST of mRNA_H-paniculata_contig1674.3801.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 5.520e-75
Identity = 162/419 (38.66%), Postives = 222/419 (52.98%), Query Frame = 2
Query:  260 EDYDESRVKRRQRVYP*KHYRPSAW-ATMLRCDSLGDPSSST--ARQFRRRFRVPHMFFLGLVSLAEK--WFHSAAGDVAGHAGIPLKLKVLAVLQVLDRGNCFDDISQMPLMSESTAQATFHKFCKNFSAELFDEHIFLPTGQALEKIIHEYGGSGFTAAVGSTDVTDIEWDCCLCIFARSYTGKEGFATIAYQATADHSGRVLAVTKGFPRATNDKSIIRFDLAVQMVCEDSM*RDRTFRLYSGDATAHGRSTRVSI-----YLWTVGIINGLCSCPLRSAPYVARRRAGARRWRVYERMWSASLVS*RAALESSNSLSSTXXXXXXXXXXXXXXXXXXXXILHNMLHAHDGLDMLEEDADWTGMDGLHDPEVVDPETDHSRVGIRHNIGGSEVQGVEPDYHVPKKKLIAHFSYRRQ 1486
            ED + SR  +R+RVY  K Y  S W   ++     G+   +T  AR+FR  FRVP+ FF+ LV L     WF +   DV G   +P++LKVLA LQ+L RGN F DI  M  +S  T  +TFH+FCK F+AEL+DE+++LPTG+ L K++ +Y   GF  AVGSTDVT I W  C    AR YTGKEG  T+A+Q T DHSGRVLAVT+GF  ATNDK+IIR+D AV  +  D +  ++ ++LY+ D           +     + W   I      CP+     +  +R  + R  V        ++  R  +   N L+                      ILHNMLH+ D    + E+ +W G  GLH+    DP TD+S VG     G  E   VE  +   + KL+ +F YRR+
Sbjct:   85 EDDEASREVKRRRVYVRKDYTKSGWWQELMELRETGETDHTTREARRFRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPS--KCPIDRGDLIFSKRLESARKDVE---CYFGILKGRFRI---NKLA-----IGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMD--GQHEAVEVETGFGALRSKLVTNFVYRRE 488          
BLAST of mRNA_H-paniculata_contig1674.3801.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 221 bits (562), Expect = 9.250e-63
Identity = 139/351 (39.60%), Postives = 185/351 (52.71%), Query Frame = 2
Query:  506 KLKVLAVLQVLDRGNCFDDISQMPLMSESTAQATFHKFCKNFSAELFDEHIFLPTGQALEKIIHEYGGSGFTAAVGSTDVTDIEWDCCLCIFARSYTGKEGFATIAYQATADHSGRVLAVTKGFPRATNDKSIIRFDLAVQMVCEDSM*RDRTFRLYSGDATAHGRSTRVSIYLWTVGIINGLCSCPLRSAP--YVARRRAGARRWRVYERMWSASLVS*RAALESSNSLSSTXXXXXXXXXXXXXXXXXXXXILHNMLHAHDGLDMLEEDADWTGMDGLHDPEVVDPETDHSRVGIRHNI-------------GGSEVQGVEPDYHVPKKKLIAHFSYRRQMNDITLLTR 1513
            +++   V QVL +GNCFDD+ Q+  MS+S AQ TFHKFC++F+AE+FDEHI+LPTG  L++++  +   G+T A GSTDVT I W+ C     RS+TGKEGF TIAY  T DH GR LAVT GF  ATNDK+IIR+D  V  +   S   +R ++L   + T   R     I      + NG        AP  Y  R    A         +S  L S R  +     L                       ILHNMLH  DGLD+ EE+ DWTG  G HD    DP TD++ VG +  +             GG   +   PD+   K++LI  F++R+++NDIT L+R
Sbjct:   34 RIRASDVPQVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLI------VDNGYHEWVTLIAPSKYPQRNEDTA---------FSRDLESVRKDVGCFRILK---LRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEKAECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWLSR 366          
BLAST of mRNA_H-paniculata_contig1674.3801.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE)

HSP 1 Score: 218 bits (556), Expect = 7.120e-62
Identity = 124/294 (42.18%), Postives = 172/294 (58.50%), Query Frame = 2
Query:  128 FITSALDAIVAAVEYMDEESRCIQLLGAEALSLAAFAAVEKAEREDYDESRVKRRQRVYP*KHYRPSAWATMLRCDSLGDPSSSTARQFRRRFRVPHMFFLGLVSL--AEKWFHSAAGDVAGHAGIPLKLKVLAVLQVLDRGNCFDDISQMPLMSESTAQATFHKFCKNFSAELFDEHIFLPTGQALEKIIHEYGGSGFTAAVGSTDVTDIEWDCCLCIFARSYTGKEGFATIAYQATADHSGRVLAVTKGFPRATNDKSIIRFDLAVQMVCEDSM*RDRTFRLYSGDATAHGR 1003
            F  + L   +AA+  + EE    +   + +   A     +  + E+    +VKR +RV   + +R SAW   L+   L D +++ A+ FR RFRVP+ FF  LV L  A++WF     D A   GIPL+LKVL       +GNCFDD+ Q+  MSES AQA FHKFC++ +AE+FDEHI+LPTG  L++++  +   G T A GSTDVT I  + C     RS+TGKEGF TIAY+ T DH+GR LAVT GF   TNDK+ IR+D  V  +  +S   +R ++L   + T   R
Sbjct:    8 FEAAVLSVALAALHQIQEEDGRRRTARSVSYWDAVLFDEDSEDEEEVVGPKVKRTRRVTQRRDWRTSAWWEKLQDVDLADHTTAAAKVFRERFRVPYPFFQELVKLSRAKRWFSPGEKDAANREGIPLELKVLG------KGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTR 295          
BLAST of mRNA_H-paniculata_contig1674.3801.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 7.000e-60
Identity = 136/372 (36.56%), Postives = 189/372 (50.81%), Query Frame = 2
Query:  311 KHYRPSAWATMLRCDSLGDPSSSTARQFRRRFRVPHMFFLGLVSLAEK--WFHSAAGDVAGHAGIPLKLKVLAVLQVLDRGNCFDDISQMPLMSESTAQATFHKFCKNFSAELFDEHIFLPTGQ--ALEKIIHEYGGSGFTAAVGSTDVTDIEWDCCLCIFARSYTGKEGFATIAYQATADHSGRVLAVTKGFPRATNDKSIIRFDLAVQMVCEDSM*RDRTFRLYSGDATAHGRSTRVSIYLWTVGIINGLCSCPLRSAPYVARRRAGARRWRVYER--MWSASLVS*RAALES-----SNSLSSTXXXXXXXXXXXXXXXXXXXXILHNMLHAHDGLDMLEEDADWTGMDGLHDPEVVDPETDHSRVGIR 1393
            K     AWA ML    L D +S +++QFR  FRVP  FFL LV+L +   WF ++  D A     P++ KVLA L +L RGNCF  I Q+  MS  T Q  FHKFCK+F+ E++DEHI+LP+ Q   L+ ++ +Y   GF+ A+GS DVT I W  C    ARSYTGKEG  T+ YQ T +H+GR +AVT+GF  +TNDK+ + +D  V+ +  D+   ++TF +Y+ D T    +T    YL    + NG     +   P          ++ + E   ++S  L S R  +E                                 ILHNMLH  DG+D L E+  W    G       + E D S VG +
Sbjct:   29 KEVEKCAWAQMLEDKDLEDSNSISSKQFRLDFRVPDSFFLRLVALVKSKDWFTTSGCDAARRQSHPVEHKVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTT---TTLKGCYLL---VDNGYHKWKILMEPT---------KYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSAGAGTGVATEQEADSSTVGAK 385          
BLAST of mRNA_H-paniculata_contig1674.3801.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 214 bits (545), Expect = 1.730e-59
Identity = 151/431 (35.03%), Postives = 212/431 (49.19%), Query Frame = 2
Query:  341 MLRCDSLGDPSSSTARQFRRRFRVPHMFFLGLVSL--AEKWFHSAAGDVAGHAGIPLKLKVLAVLQVLDRGNCFDDISQMPLMSESTAQATFHKFCKNFSAELFDEHIFLPTGQA--LEKIIHEYGGSGFTAAVGSTDVTDIEWDCCLCIFARSYTGKEGFATIAYQATADHSGRVLAVTKGFPRATNDKSIIRFDLAVQMVCEDS----------------------------M*RDRTFRLYSGDATAHGRSTRVSIYLWTVGIINGLCSCPLRSAPYVARRRAGARRWRVYER--MWSASLVS*RAALES-----SNSLSSTXXXXXXXXXXXXXXXXXXXXILHNMLHAHDGLDMLEEDADWTGMDGLHDPEVVDPETDHSRVGIRHNIGGSEVQGVEPDYHVPKKKLIAHFSYRRQ-MNDITLLTR 1513
            +L    L D +S TA+Q R  FRVP+  FL LV+L  ++ WF +A  D  G A  P++ KVLA L +L RGNCF  I QM  MS  T Q  FHKFC++F+ E++DE I LPT ++  L+ ++ +Y   GFT AVGS DVT I W  C    ARSYTGKEGF TIAYQ T DH+GR +AVT+GF  +TNDK+I+ +D AV+ +  D                                ++TF +Y+ D T    +T    YL    + NG     +   P          ++ + E   ++S  L S R  +E                                 ILHNMLH  DG+D L E+ +W    G+      +PE D   VG +     ++   +E ++ V K++L   F+YR++   DI  L+R
Sbjct:   26 LLEDKDLEDSTSITAKQLRVDFRVPYTVFLRLVALVKSKNWFSTAVTDAVGWASHPVEHKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTT---TTLKGCYLL---VDNGYHKWQILIEPS---------KYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGVGATLTTEPEADCGSVGTK---DVNDQPQLEIEHTVRKRQLTTSFAYRKKHKKDIVWLSR 438          
BLAST of mRNA_H-paniculata_contig1674.3801.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE)

HSP 1 Score: 212 bits (539), Expect = 9.200e-59
Identity = 132/351 (37.61%), Postives = 175/351 (49.86%), Query Frame = 2
Query:  317 YRPSAWATML-RCDSLGD-----PSSSTARQFRRRFRVPHMFFLGLVSLAEKWFHSAAGDVAGHAGIPLKLKVLAVLQVLDRGNCFDDISQMPLMSESTAQATFHKFCKNFSAELFDEHIFLPTGQALEKIIHEYGGSGFTAAVGSTDVTDIEWDCCLCIFARSYTGKEGFATIAYQATADHSGRVLAVTKGFPRATNDKSIIRFDLAVQMVCEDSM*RDRTFRLYS--GDATAHGRSTRVSIYLWTVGIINGLCSCPLRSAPYVARRRAGARRWRVYERMWSASLVS*RAALESSNSLSSTXXXXXXXXXXXXXXXXXXXXILHNMLHAHDGLDMLEEDADWTGMDGLHD 1345
            Y  SAW   L   +SL       PSS  A+ FR  FRVPH FF   V L    F +A  DVAG   +PL+LKVL VLQVL RGNCF D++Q+ LMS  TA+ +FH+FC  FS+ L+ + + LP G+ L+K+  EYG  G   AV S D T I W  C      ++ GKEG+ T+ Y+A+ DHSGR+L+ TKGFP A NDK++++ DL+V  + E+       F L+   G+ T H          W + +  G    P    P+        + W          +      L+    L  T                    I+HNMLH  DGL  LE+D DW G DG  D
Sbjct:   41 YSSSAWGVRLANLESLRIAGRLVPSSREAKAFRSDFRVPHEFFRHFVDLVRTVFPTATRDVAGRQCVPLELKVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGG-------WLI-VDGGYHRVPSLICPFKEYASEAQQEWSKRFESIRKDIECLFGRLKGRFRLFKTGILFGTREKIDNAWFTAC--IIHNMLHQFDGLANLEKDVDWAGKDGEAD 381          
BLAST of mRNA_H-paniculata_contig1674.3801.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 204 bits (519), Expect = 4.370e-56
Identity = 131/348 (37.64%), Postives = 180/348 (51.72%), Query Frame = 2
Query:  461 HSAAGDVAGHAGIPLK-LKVLAVLQVLDRGNCFDDISQMPLMSESTAQATFHKFCKNFSAELFDEHIFLPTGQALEKIIHEYGGSGFTAAVGSTDVTDIEWDCCLCIFARSYTGKEGFATIAYQATADHSGRVLAVTKGFPRATNDKSIIRFDLAVQMVCEDSM*RDRTFRLYSGDATAHGRSTRVSI-----YLWTVGIINGLCSCPLRSAPYVARRRAGARRWRVYERMWSASLVS*RAALESSNSLSSTXXXXXXXXXXXXXXXXXXXXILHNMLHAHDGLDMLEEDADWTGMDGLHDPEVVDPETDHSRVGIRHNIGGSEVQGVEPDYHVPKKKLIAHFSYRRQ 1486
            H  A D++     P    +VLA LQ+L RGN F DI  M  +S  T  +TFH+FCK F+AEL+DE+++LPTG+ L K++ +Y   GF  AVGSTDVT I W  C    AR YTGKEG  T+A+Q T DHSGRVLAVT+GF  ATNDK+IIR+D AV  +  D +  ++ ++LY+ D           +     + W   I      CP+     +  +R  + R  V        ++  R  +   N L+                      ILHNMLH+ D    + E+ +W G  GLH+    DP TD+S VG     G  E   VE  +   + KL+ +F YRR+
Sbjct:   65 HEKATDLSARCCFPPPHTQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPS--KCPIDRGDLIFSKRLESARKDVE---CYFGILKGRFRI---NKLA-----IGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMD--GQHEAVEVETGFGALRSKLVTNFVYRRE 397          
BLAST of mRNA_H-paniculata_contig1674.3801.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 6.310e-56
Identity = 139/417 (33.33%), Postives = 194/417 (46.52%), Query Frame = 2
Query:  305 P*KHYRPSAWATML------RCDSLGDPSSSTARQFRRRFRVPHMFFLGLVSLAEKWFHSAAGDVAGHAGIPLKLKVLAVLQVLDRGNCFDDISQMPLMSESTAQATFHKFCKNFSAELFDEHIFLPTGQALEKIIHEYGGSGFTAAVGSTDVTDIEWDCCLCIFARSYTGKEGFATIAYQATADHSGRVLAVTKGFPRATNDKSIIRFDLAVQMVCEDSM*RDRTFRLY--SGDATAHGRSTRVSIYLWTVGIINGLCSCPLRSAPYVARRRAGARRWRVYERMWSASLVS*RAALES-----SNSLSSTXXXXXXXXXXXXXXXXXXXXILHNMLHAHDGLDMLEEDADWTGMDGLHDPEVVDPETDHSRVGI--RHNIGGSEVQGVEPD----YHVPKKKLIAHFSYRRQMNDI 1498
            P   Y  SAW   L      RC       S  AR FR  FRVP+ FFL  V +    F +   DV G   +PL+LKVL VLQVL RGNCF D++   LMS +TA+ +FH+FC  F+A L+   I LP G+ L ++   Y   G+  AVGS D T + W+ C      ++ GKEG+ T+ ++A  DH+GR+LA TKG+P A NDK++++ DL+V+ V  +       + +Y  +GD T H          W +    G    PL   P+            V E+ WS  L S R  +E                                 I+HNML A DGLD LE D DW G DG  D          S  G+     +  S    V  D    +H  ++ L+ HF++ +  +++
Sbjct:  135 PRPDYNKSAWGLRLAQMESLRCSHNLAQHSREARAFRADFRVPYEFFLEFVEMVRPVFPAREHDVCGRLCVPLELKVLGVLQVLGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEGLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGG-------WLIAD-GGYHRVPLLICPFKVYAN-------VAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEVDMDWEGKDGEAD----------STTGVFPAVTVADSAEDKVSGDDDAAFHAHRQCLVDHFAFAKSSSEV 526          
BLAST of mRNA_H-paniculata_contig1674.3801.1 vs. uniprot
Match: A0A6H5JHC3_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHC3_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 4.220e-53
Identity = 139/382 (36.39%), Postives = 184/382 (48.17%), Query Frame = 2
Query:  269 DESRVKRRQRVYP*KHYRPSAWATMLRC--DSLGDPSSSTARQFRRRFRVPHMFFLGLV----SLAEKWFHSAAGDVAGHAG---IPLKLKVLAVLQVLDRGNCFDDISQMPLMSESTAQATFHKFCKNFSAELFDEHIFLPTGQALEKIIHEYGGSGFTAAVGSTDVTDIEWDCCLCIFARSYTGKEGFATIAYQATADHSGRVLAVTKGFPRATNDKSIIRFDLAVQMVCEDSM*RDRTFRLYSGDATAHGRSTRVSIYLWTVGIINGLCSCPLRSAPYVARRRAGARRWRVYERMWSASLVS*RAALES-----SNSLSSTXXXXXXXXXXXXXXXXXXXXILHNMLHAHDGLDMLEEDADWTGMDGLHDPEVVDPETD 1372
            +E   KR++ VYP   Y  SAWA MLR   D+L DP++  AR FRRRFR+P+  FL LV    S   K F + A D+ G      IP++LKVL       RGN FDDI Q+  +SE T Q  FH+F + F+ E F +H+  P G  LE+I+ EY   GF    GS D T I +         SY GKEGFAT+A++   DH  R L V+K FP A NDK+I+ FD  V+ +  +   +D  F L   D +         +YL   G   G   CP++    V +     R+           L S R  +E                                  LHNMLH++DGL +LE+D +W G DG  DP V  PE +
Sbjct:   48 EEPSAKRKRTVYPRPDYHNSAWAIMLREKEDALADPTTKDARLFRRRFRMPYPIFLELVKEIKSAGWKGFTTDATDLGGRGTRPCIPVELKVLG------RGNFFDDIPQLSFISEQTIQRVFHEFTQRFALEFFPKHVKFPQGAHLEEILREYKDVGFGGCAGSMDCTHIHYQSAPNSGRHSYVGKEGFATVAFEVVCDHKLRCLGVSKAFPGAMNDKTIVMFDEYVRRIKTEC--KDVPFTLLGEDGSEFEER---GLYLIVDG---GYHKCPVQFP--VTQDELAFRK----------QLESVRKDIECFFGILKGRFRILKMPLLYRGIHKLDCIFQTCCALHNMLHSYDGLSLLEKDCEWAGADGDLDPWVTTPEAE 403          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1674.3801.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAU4_9PHAE7.860e-8439.72Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE5.520e-7538.66Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K796_9PHAE9.250e-6339.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSI7_9PHAE7.120e-6242.18DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JHI0_9PHAE7.000e-6036.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE1.730e-5935.03DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JV45_9PHAE9.200e-5937.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY50_9PHAE4.370e-5637.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0H2_9PHAE6.310e-5633.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHC3_9PHAE4.220e-5336.39DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1674contigH-paniculata_contig1674:19839..24077 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score110.2
Seed ortholog evalue1.2e-21
Seed eggNOG ortholog2880.D7FSK2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Plant transposon protein
EggNOG OGs2E2RF@1,2S9YA@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1820
Cds size612
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1674.3801.1prot_H-paniculata_contig1674.3801.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1674 21149..22234 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929326.6524043-UTR-H-paniculata_contig1674:19838..206111622929326.6524043-UTR-H-paniculata_contig1674:19838..20611Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1674 19839..20611 -
1691480816.9529598-UTR-H-paniculata_contig1674:19838..206111691480816.9529598-UTR-H-paniculata_contig1674:19838..20611Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1674 19839..20611 -
1622929326.6661065-UTR-H-paniculata_contig1674:21053..211481622929326.6661065-UTR-H-paniculata_contig1674:21053..21148Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1674 21054..21148 -
1691480816.9626775-UTR-H-paniculata_contig1674:21053..211481691480816.9626775-UTR-H-paniculata_contig1674:21053..21148Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1674 21054..21148 -
1622929326.7036884-UTR-H-paniculata_contig1674:22234..225421622929326.7036884-UTR-H-paniculata_contig1674:22234..22542Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1674 22235..22542 -
1691480816.9868968-UTR-H-paniculata_contig1674:22234..225421691480816.9868968-UTR-H-paniculata_contig1674:22234..22542Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1674 22235..22542 -
1622929326.7155676-UTR-H-paniculata_contig1674:24045..240771622929326.7155676-UTR-H-paniculata_contig1674:24045..24077Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1674 24046..24077 -
1691480816.995072-UTR-H-paniculata_contig1674:24045..240771691480816.995072-UTR-H-paniculata_contig1674:24045..24077Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1674 24046..24077 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929326.680242-CDS-H-paniculata_contig1674:21148..215861622929326.680242-CDS-H-paniculata_contig1674:21148..21586Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1674 21149..21586 -
1691480816.970614-CDS-H-paniculata_contig1674:21148..215861691480816.970614-CDS-H-paniculata_contig1674:21148..21586Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1674 21149..21586 -
1622929326.692135-CDS-H-paniculata_contig1674:22060..222341622929326.692135-CDS-H-paniculata_contig1674:22060..22234Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1674 22061..22234 -
1691480816.9787436-CDS-H-paniculata_contig1674:22060..222341691480816.9787436-CDS-H-paniculata_contig1674:22060..22234Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1674 22061..22234 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1674.3801.1

>prot_H-paniculata_contig1674.3801.1 ID=prot_H-paniculata_contig1674.3801.1|Name=mRNA_H-paniculata_contig1674.3801.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=204bp
MLRCDSLGDPSSSTARQFRRRFRVPHMFFLGLVSLAEKWFHSAAGDVAGH
AGIPLKLKVLAVLQVLDRGNCFDDISQMPLMSESTAQATFHKFCKNFSAE
LFDEHIFLPTGQALEKIIHEYGGSGFTAAVGSTDVTDIEWDCCLCIFARS
YTGKEGFATIAYQATADHSGRVLAVTKGFPRATNDKSIIRFDLAVQMVCE
DSM*
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mRNA from alignment at H-paniculata_contig1674:19839..24077-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1674.3801.1 ID=mRNA_H-paniculata_contig1674.3801.1|Name=mRNA_H-paniculata_contig1674.3801.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4239bp|location=Sequence derived from alignment at H-paniculata_contig1674:19839..24077- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGTGCATCCTGTTATATCGGAGGAAACGGAAGGTGTGTATTCAAAGCCGC TGTAAGGACACCGTGTCTTCGTGTATTTTATCTGACTTGATAGTTGAGAT GAACAACATGAAGGGATATTGTGTTGGCTATGCTATTTTATGGGAAACAC GGATATAGATTAGCTTAGGTGAAAGATGTAAGGAGATTCTACTATAGTGC TCGCACTCTGTAATCGAATATCCATGACGTTTGACGTTTCGAAGGCCCAT ATCGAGACTTTTTCTAAGCACAAGCTACTAAGCTAATAATCGTCAACGTG TGCTGAGCAAGGGATATCAACTGAGATATTTGCACGATTGCACTCTTCCC TTGCTGAGCCTGTAGTTGAAGGAGTAGTTCCGCTTTCTCGCGGTAAGTAC AACTGTAGCACTTGGTCACGTCTACGACCAGGTAATAGTCAAAGCTTACC GCGTTGCCAATCTATTGCGGGTCGCTGCGCTCCCATCGCGATGGGGCTTC AAGGCTAAAGTATATGTACAGGAAAGAGAAGTAGTTATAAACTTTGGACC ACTCAATCTAGATTATTTGGCCACGCATGCCACGTGGACAGTAGAACTGC AGTCAGCCGCAACCCTCGTATCGTAGTCACGACTACGGGCGGTTTTAAAC GTGGTTCTTTCTTCGCCTTCTTCCTTCTTTTCTGTTGCGCTCTTTTTCAC CTTCTCCCCATAACATGCTGATATTTCGTCGGAAGGATCGAAAAAAATTG AAATAGGGTCAAGGAATACTGTGGGCAGAAATATTAGTTTTTCGTTTCTG AAACCATCTCCTTTAGGATCGAAAAAACACACTCGAAAACGTAAATTTGA ATTTTTTATATGAGAAATTTCGATTCCTCATTTTGTTGTCCCGAACAACT CGAATAATGTTCGGGACAAAATCGTTTTGGGAGGACCGACAGCTCCCAGC TACAAAAATCCAGCAATTTTTCGTTAGCCCTCGCATTTCATCAACAGAAA ACAGTATATTGGTCACAATCAGAGTGGAACTTCACAATCAGAGTGCAATC GTCAAGACGCGTAGATCTCGTACAGGGCAGTCAGCTCGAAGCTTTGGACG TCATAGGGCGGCGCGAATGAAACTCCTGACCTATGTGGTCCCGCCGATAC TCTTGTTGGGTCAGTCAGGCTCTCCGATCAAAAGTCGTTTTCATTTCAAA GTTTGTACTCCCGCCATGCACGATTGATTGACTTCAAGCGTTCATAACGG GTGAAATTGTTCTGTTTCAGCCCTCACTCCACCATAATTTAACCGGGGGC GTTTGTAATGTTATGTTCGTCCTTGCATGGGCCGGGGCTTTCATTCAAGC GGATTGGTGAGGTGTAACTCTTCGAATTGACGGTGCTGCGTGGTTTCTAA GGCTGCGCTCTGATCGTGAAGTTACACTCTGAGTCTCATCAATATACTGT TAGAATCAATTTTCTGGGAATTCAACGAGATACGGAGGCGTTACTTTGCT TTCTTCTCAGATTGTCGATCTTTCATTGCACACAGTGGGATACCCACGCT GATCGCGGATGCCACGAGCACACACATCATCCGACGTGTGAGCCCGGCCG CCCGATGGCAGTCTGGAGGAATGGCAGACGTTTATTACGTCGGCGCTTGA TGCTATAGTGGCGGCTGTCGAATACATGGACGAAGAGAGCAGGTGCATTC AATTGCTGGGTGCAGAGGCGCTTTCTCTTGCTGCCTTTGCGGCGGTTGAG AAGGCTGAGCGCGAAGACTATGATGAGTCTCGTGTAAAGCGCAGGCAACG TGTGTACCCCTGAAAACACTACAGACCGTCGGCGTGGGCAACCATGCTCC GCTGTGATTCCCTTGGCGATCCTTCCTCCAGCACCGCTAGGCAGTTTAGG CGCCGATTTCGTGTCCCTCACATGTTCTTTCTCGGCCTGGTGAGCCTAGC GGAGAAGTGGTTCCACTCTGCAGCCGGCGACGTCGCAGGACACGCAGGGA TCCCATTGAAGCTCAAGGTAGGTCCATGCGGTTAGGGTAGACAACTGTAC AATGCTAATAGGGGTACTGGTTTCGTGATGCCTGCAGTCGTGCCTGTGCG TTGTTGTGCAACTACACAACCTCCCTCCACAAACCCCTGACACAGCATCG CTGAGAGTGCATCTTGCTGTGATACGCTCTACGAAAAAGCTCTACACACA ATGCTGCGACTACTCCTTAAACTGTAGACAGCCTTTGGCTTTGTCGACAA TGGGTAGGATGCACCGTAAAAAACATATGATGCTGCCCTTGCACAGCGGT GCATTACCTTGCGAAGGGACACGACAGATTTCGGCAAGTGTAGCAGGGAA GTCGGGGTTCACCGCGTGTTTACTTACATGTCTTACACAATCAAGGTGGA ACCATCTCTCATGAAAGGTTATTCGACCCCGTGTGCTCATCGAAACGAGG CCTCACATGTTGTGCGCGTGTCCCCCCCCCCTTACTGTCAGGTGCTCGCT GTTCTTCAGGTACTGGATAGGGGAAACTGCTTTGATGACATTTCTCAGAT GCCCCTCATGAGCGAGTCGACAGCGCAAGCAACATTTCACAAGTTCTGCA AGAATTTTTCCGCAGAGCTGTTCGATGAGCATATCTTCCTGCCGACGGGG CAAGCTCTCGAGAAGATCATCCATGAGTATGGCGGCTCGGGGTTCACCGC GGCCGTCGGCTCTACTGATGTTACCGACATCGAATGGGACTGCTGCCTGT GTATCTTTGCACGTTCTTACACGGGCAAGGAGGGATTTGCAACCATCGCA TACCAAGCGACGGCCGATCATAGCGGCCGCGTCCTTGCCGTCACGAAGGG CTTTCCTCGGGCTACCAACGACAAGTCAATCATCCGTTTCGACCTGGCGG TGCAGATGGTTTGTGAGGATTCCATGTAGAGGGACCGGACGTTCAGGCTC TACAGCGGGGACGCGACGGCACATGGACGGAGCACAAGGGTGTCTATCTA CTTGTGGACAGTGGGTATCATAAAGTGAGTGTGATACCAGTAACGTTACG TTTTGGCTCGGAGTGTACGTGGGGGCTAAATAATACGAGCGACTTGACCG CCCCAGAAGCACAATGTTTCGTCATTGCCCTCAATAAAGACCGCGGTTTA CTGCAGGCCAAACGCGTACACGCGCAAGACGTGAGGAGCATGTTGCGTAT CACTGTCACCACTAGGTCGCGAATTGATTTTACGTCACCGTTTCAAACGA GCGGGACAGATAACCTTCAAAAATCACACCCGTATCAAAGGAGGGACTCT AACATAACATTACAAATAATGTTTCCTATAACCTGGTAGCATTGCTGTTT TCCCATCGAACGGGGCGATAACGGCCCCCGCGTGAGAAGCCAACATACAT CAATGCCCGCTCCGTGCAAACCCAACCGTACGTCGCCCACTCCACTGCGT TTTCATGTGCATACAGTGGGCTATGCTCATGCCCCCTACGAAGCGCGCCT TATGTGGCGAGGAGACGCGCTGGAGCAAGACGTTGGAGAGTGTACGAAAG GATGTGGAGTGCTTCTTTGGTGTCCTGAAGGGCCGCTTTAGAATCCTCAA ACTCCCTATCCTCTACCGCGAAAAAGAGTACATCGACAACGTCTTCTTCG CATGCTGCATCCTCCACAACATGCTGCATCCTCCACAACATGCTGCACGC TCATGACGGATTGGACATGTTAGAGGAAGACGCGGACTGGACGGGGATGG ACGGTCTGCACGACCCCGAAGTCGTTGATCCCGAGACGGACCACAGTCGG GTCGGGATCAGGCACAACATCGGCGGCAGCGAGGTACAAGGAGTGGAACC GGACTACCACGTGCCGAAGAAAAAGTTGATCGCACACTTTTCATACCGCA GGCAGATGAATGACATCACATTGCTTACTAGGTAGGCGCTGTGGTCATAG CCGTGCAAAACGCGGTCCTCACGCCTGGTTGCATAGTCGATAGTACAGGA GGAGTGTTTGCTTTGGTTTGATGTATATCTTCCAGCGACCAGTGTCGTTA CTTTCGCGGACTGGACAGAATAGGCAGAGGGTGCTTTAATTGAAACTTCA CATTGTCACGCGCGGCTGCGTTTTACTAGCTCGGTGTTGATATATTTACA CCGACTTTCGAGTGTGTTTACGGAGTTTTTGAGAAGACGTGTTTTTCGGG GGGGGTTGCAACAGTTGAGGGCCAAAACGTCAAGGAGCT
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Coding sequence (CDS) from alignment at H-paniculata_contig1674:19839..24077-

>mRNA_H-paniculata_contig1674.3801.1 ID=mRNA_H-paniculata_contig1674.3801.1|Name=mRNA_H-paniculata_contig1674.3801.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1224bp|location=Sequence derived from alignment at H-paniculata_contig1674:19839..24077- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTCCGCTGTGATTCCCTTGGCGATCCTTCCTCCAGCACCGCTAGGCA
GTTTAGGCGCCGATTTCGTGTCCCTCACATGTTCTTTCTCGGCCTGGTGA
GCCTAGCGGAGAAGTGGTTCCACTCTGCAGCCGGCGACGTCGCAGGACAC
GCAGGGATCCCATTGAAGCTCAAGATGCTCCGCTGTGATTCCCTTGGCGA
TCCTTCCTCCAGCACCGCTAGGCAGTTTAGGCGCCGATTTCGTGTCCCTC
ACATGTTCTTTCTCGGCCTGGTGAGCCTAGCGGAGAAGTGGTTCCACTCT
GCAGCCGGCGACGTCGCAGGACACGCAGGGATCCCATTGAAGCTCAAGGT
GCTCGCTGTTCTTCAGGTACTGGATAGGGGAAACTGCTTTGATGACATTT
CTCAGATGCCCCTCATGAGCGAGTCGACAGCGCAAGCAACATTTCACAAG
TTCTGCAAGAATTTTTCCGCAGAGCTGTTCGATGAGCATATCTTCCTGCC
GACGGGGCAAGCTCTCGAGAAGATCATCCATGAGTATGGCGGCTCGGGGT
TCACCGCGGCCGTCGGCTCTACTGATGTTACCGACATCGAATGGGACTGC
TGCCTGTGTATCTTTGCACGTTCTTACACGGGCAAGGAGGGATTTGCAAC
CATCGCATACCAAGCGACGGCCGATCATAGCGGCCGCGTCCTTGCCGTCA
CGAAGGGCTTTCCTCGGGCTACCAACGACAAGTCAATCATCCGTTTCGAC
CTGGCGGTGCAGATGGTTTGTGAGGATTCCATGTAGGTGCTCGCTGTTCT
TCAGGTACTGGATAGGGGAAACTGCTTTGATGACATTTCTCAGATGCCCC
TCATGAGCGAGTCGACAGCGCAAGCAACATTTCACAAGTTCTGCAAGAAT
TTTTCCGCAGAGCTGTTCGATGAGCATATCTTCCTGCCGACGGGGCAAGC
TCTCGAGAAGATCATCCATGAGTATGGCGGCTCGGGGTTCACCGCGGCCG
TCGGCTCTACTGATGTTACCGACATCGAATGGGACTGCTGCCTGTGTATC
TTTGCACGTTCTTACACGGGCAAGGAGGGATTTGCAACCATCGCATACCA
AGCGACGGCCGATCATAGCGGCCGCGTCCTTGCCGTCACGAAGGGCTTTC
CTCGGGCTACCAACGACAAGTCAATCATCCGTTTCGACCTGGCGGTGCAG
ATGGTTTGTGAGGATTCCATGTAG
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