mRNA_H-paniculata_contig16727.3796.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16727.3796.1 vs. uniprot
Match: D8LAS9_ECTSI (Sphingosine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAS9_ECTSI) HSP 1 Score: 76.3 bits (186), Expect = 1.050e-14 Identity = 37/52 (71.15%), Postives = 42/52 (80.77%), Query Frame = 1
Query: 1 SDVDIESEAYRWLGSLRFTVGTVFRIIGLRHYRGRISFLPACLDADGSPAAS 156
SDVDIESEAYRW+GSLRFTVGT+ RI L+HYRGRISFLP D D + A +
Sbjct: 388 SDVDIESEAYRWMGSLRFTVGTIVRIANLKHYRGRISFLP---DLDAAAATT 436
BLAST of mRNA_H-paniculata_contig16727.3796.1 vs. uniprot
Match: Q28EJ9_XENTR (Sphingosine kinase 1 n=3 Tax=Xenopus tropicalis TaxID=8364 RepID=Q28EJ9_XENTR) HSP 1 Score: 65.9 bits (159), Expect = 4.760e-11 Identity = 30/54 (55.56%), Postives = 39/54 (72.22%), Query Frame = 1
Query: 1 SDVDIESEAYRWLGSLRFTVGTVFRIIGLRHYRGRISFLPACLDADGSPAASAH 162
SDVDIESE YR++GS RF+ GT R+ LR YRGR+S+LPA D +P + +H
Sbjct: 304 SDVDIESERYRFMGSARFSFGTFVRLTALRTYRGRLSYLPARTSPDSTPESDSH 357
BLAST of mRNA_H-paniculata_contig16727.3796.1 vs. uniprot
Match: A0A8D2PLK3_ZOSLA (Sphingosine kinase 1 n=1 Tax=Zosterops lateralis melanops TaxID=1220523 RepID=A0A8D2PLK3_ZOSLA) HSP 1 Score: 65.1 bits (157), Expect = 6.190e-11 Identity = 30/50 (60.00%), Postives = 38/50 (76.00%), Query Frame = 1
Query: 1 SDVDIESEAYRWLGSLRFTVGTVFRIIGLRHYRGRISFLPACLDADGSPA 150
SDVDI+SE YRWLGS RFT+GT+ + LR Y+GR+S+LP + GSPA
Sbjct: 145 SDVDIDSEKYRWLGSARFTLGTLQCLAKLRVYQGRLSYLPVAAEQGGSPA 194
BLAST of mRNA_H-paniculata_contig16727.3796.1 vs. uniprot
Match: A0A3M6TSS3_POCDA (DAGKc domain-containing protein n=2 Tax=Pocilloporidae TaxID=46729 RepID=A0A3M6TSS3_POCDA) HSP 1 Score: 65.5 bits (158), Expect = 6.520e-11 Identity = 31/41 (75.61%), Postives = 35/41 (85.37%), Query Frame = 1
Query: 1 SDVDIESEAYRWLGSLRFTVGTVFRIIGLRHYRGRISFLPA 123
SDVDIESE YR+LG RF +GTV RIIGLR YRGR+S+LPA
Sbjct: 296 SDVDIESERYRFLGERRFLIGTVARIIGLRKYRGRLSYLPA 336
BLAST of mRNA_H-paniculata_contig16727.3796.1 vs. uniprot
Match: A0A8C0ZCZ9_CYACU (Sphingosine kinase 1 n=1 Tax=Cyanistes caeruleus TaxID=156563 RepID=A0A8C0ZCZ9_CYACU) HSP 1 Score: 65.1 bits (157), Expect = 7.040e-11 Identity = 31/53 (58.49%), Postives = 39/53 (73.58%), Query Frame = 1
Query: 1 SDVDIESEAYRWLGSLRFTVGTVFRIIGLRHYRGRISFLPACLDADGSPAASA 159
SDVDI+SE YRWLGS RFT+GT+ + LR Y+GR+S+LP + SPAA A
Sbjct: 175 SDVDIDSEKYRWLGSARFTLGTLQCLAKLRVYQGRLSYLPMAAEQGSSPAARA 227
BLAST of mRNA_H-paniculata_contig16727.3796.1 vs. uniprot
Match: UPI000A2A879A (sphingosine kinase 2 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A879A) HSP 1 Score: 64.7 bits (156), Expect = 1.220e-10 Identity = 31/46 (67.39%), Postives = 37/46 (80.43%), Query Frame = 1
Query: 1 SDVDIESEAYRWLGSLRFTVGTVFRIIGLRHYRGRISFLPACLDAD 138
SDVDIESE YR+LG+ RFT+G V RI+GLR YRGR+S+LP D D
Sbjct: 291 SDVDIESEKYRYLGNARFTLGAVIRILGLRTYRGRLSYLPDDDDND 336
BLAST of mRNA_H-paniculata_contig16727.3796.1 vs. uniprot
Match: A0A3Q3EWV2_KRYMA (Sphingosine kinase 2 n=3 Tax=Rivulidae TaxID=28771 RepID=A0A3Q3EWV2_KRYMA) HSP 1 Score: 64.7 bits (156), Expect = 1.230e-10 Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = 1
Query: 1 SDVDIESEAYRWLGSLRFTVGTVFRIIGLRHYRGRISFLPACL---DADGSPAASAHSVGQSV 180
SDVDIESE YR LGS RFT+GT+ RI LR Y+GR+S+LP + A+G+P S + +S+
Sbjct: 336 SDVDIESERYRGLGSARFTLGTLVRIASLRSYKGRLSYLPPSVVTTTANGTPPPSKRPLSRSI 398
BLAST of mRNA_H-paniculata_contig16727.3796.1 vs. uniprot
Match: A0A3P8UXF8_CYNSE (Sphingosine kinase 2-like n=1 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8UXF8_CYNSE) HSP 1 Score: 64.7 bits (156), Expect = 1.230e-10 Identity = 30/43 (69.77%), Postives = 35/43 (81.40%), Query Frame = 1
Query: 1 SDVDIESEAYRWLGSLRFTVGTVFRIIGLRHYRGRISFLPACL 129
SDVDIESE YR LGS RFT+GT+ RI LR Y+GR+SFLP C+
Sbjct: 335 SDVDIESERYRGLGSARFTLGTLVRIASLRSYKGRLSFLPPCV 377
BLAST of mRNA_H-paniculata_contig16727.3796.1 vs. uniprot
Match: A0A4Z2CEP1_9TELE (DAGKc domain-containing protein n=1 Tax=Takifugu bimaculatus TaxID=433685 RepID=A0A4Z2CEP1_9TELE) HSP 1 Score: 63.5 bits (153), Expect = 2.230e-10 Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = 1
Query: 1 SDVDIESEAYRWLGSLRFTVGTVFRIIGLRHYRGRISFLP-ACLDA-DGSPAASAHSVGQSV 180
SDVDIESE YR LGS RFT+GT+ RI LR Y+GR+SFLP +C + D +P ++ +S+
Sbjct: 94 SDVDIESERYRGLGSARFTLGTLVRIASLRSYKGRLSFLPPSCTSSPDATPPPPRRALSRSI 155
BLAST of mRNA_H-paniculata_contig16727.3796.1 vs. uniprot
Match: A0A1A7YG76_9TELE (Sphingosine kinase 2 (Fragment) n=4 Tax=Nothobranchiidae TaxID=405002 RepID=A0A1A7YG76_9TELE) HSP 1 Score: 63.9 bits (154), Expect = 2.280e-10 Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 1
Query: 1 SDVDIESEAYRWLGSLRFTVGTVFRIIGLRHYRGRISFLPACL---DADGSPAASAHSVGQSV 180
SDVDIESE YR LGS RFT+GT+ RI LR Y+GR+SFLP+ + ++G+P + +S+
Sbjct: 332 SDVDIESERYRGLGSARFTLGTLVRIASLRSYKGRLSFLPSSVVTKSSNGTPPPPKRPLSRSI 394 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16727.3796.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16727.3796.1 >prot_H-paniculata_contig16727.3796.1 ID=prot_H-paniculata_contig16727.3796.1|Name=mRNA_H-paniculata_contig16727.3796.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=63bp SDVDIESEAYRWLGSLRFTVGTVFRIIGLRHYRGRISFLPACLDADGSPAback to top mRNA from alignment at H-paniculata_contig16727:209..397+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16727.3796.1 ID=mRNA_H-paniculata_contig16727.3796.1|Name=mRNA_H-paniculata_contig16727.3796.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=189bp|location=Sequence derived from alignment at H-paniculata_contig16727:209..397+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16727:209..397+ >mRNA_H-paniculata_contig16727.3796.1 ID=mRNA_H-paniculata_contig16727.3796.1|Name=mRNA_H-paniculata_contig16727.3796.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=378bp|location=Sequence derived from alignment at H-paniculata_contig16727:209..397+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |