mRNA_H-paniculata_contig16548.3724.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16548.3724.1 vs. uniprot
Match: A0A1X7SFX4_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SFX4_AMPQE) HSP 1 Score: 139 bits (349), Expect = 1.390e-38 Identity = 67/147 (45.58%), Postives = 98/147 (66.67%), Query Frame = 1
Query: 25 GFIDADWEEDVEDRKSRTGYVFKLNGGAISWCSRKQQLVTWSSTEPEYFAAGEAGKETVYLRELLGSIGFGCRGSRTLFEDNKSAINLSKGSGAHCRTKHIGVRWHVIREWIR-EVLALKYVQTGDQLADILTKGLSRVKFQRLRNL 462
G+ DADW DV++ +S TGY+F++ G A+SW S++Q V S+ E EY A +E V++REL + G T+FEDN+SAI+++K H R KHIG+++H IRE + E + +KY +T D +ADI TKGL+ KF+RLR+L
Sbjct: 30 GYSDADWGGDVDNYRSTTGYIFQIGGVAVSWKSKRQDCVALSTAEAEYMALASTAQEAVWMRELNADMNNKPNGPTTIFEDNQSAISMAKNPQFHGRAKHIGIKYHFIREQVSTESVQIKYCRTEDMVADIFTKGLTHEKFERLRSL 176
BLAST of mRNA_H-paniculata_contig16548.3724.1 vs. uniprot
Match: A0A1Y1N3K4_PHOPY (Uncharacterized protein n=2 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1N3K4_PHOPY) HSP 1 Score: 139 bits (351), Expect = 3.120e-38 Identity = 75/145 (51.72%), Postives = 97/145 (66.90%), Query Frame = 1
Query: 25 GFIDADWEEDVEDRKSRTGYVFKLNGGAISWCSRKQQLVTWSSTEPEYFAAGEAGKETVYLRELLGSIGFGCRGSRTLFEDNKSAINLSKGSGAHCRTKHIGVRWHVIREWIREV-LALKYVQTGDQLADILTKGLSRVKFQRLR 456
GF D+D+ DV+ RKS TGYVF + GAI+WCSR+QQ + S+TE EY AA EA KE ++LR LL I + L+ DN+SAI L K H RTKHI VR+H I+E + + ++YV++ DQLADILTK L VKF +LR
Sbjct: 103 GFSDSDYASDVDTRKSTTGYVFNMANGAITWCSRRQQTTSVSTTEAEYVAAAEATKEAIWLRHLLSEISGKSIENVQLYVDNQSAIKLVKNPIFHKRTKHIDVRYHFIKEKFQNGDIKIEYVRSEDQLADILTKPLVSVKFNKLR 247
BLAST of mRNA_H-paniculata_contig16548.3724.1 vs. uniprot
Match: A0A4Y9ZY34_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZY34_9AGAM) HSP 1 Score: 147 bits (370), Expect = 6.400e-38 Identity = 71/143 (49.65%), Postives = 94/143 (65.73%), Query Frame = 1
Query: 25 GFIDADWEEDVEDRKSRTGYVFKLNGGAISWCSRKQQLVTWSSTEPEYFAAGEAGKETVYLRELLGSIGFGCRGSRTLFEDNKSAINLSKGSGAHCRTKHIGVRWHVIREWIRE-VLALKYVQTGDQLADILTKGLSRVKFQR 450
G++DADW DV DR+S +GY F L GGA+SW S+KQ SSTE EY AA A KE +LR LG IG C+ + L DN+SA+ +++ H RTKHI VR+H +RE + + L+YV TGDQ+AD+LTKGL + K +
Sbjct: 985 GYVDADWAGDVNDRRSISGYTFLLAGGAVSWSSKKQNTTALSSTEAEYIAAAHAAKEATWLRTFLGEIGRPCKTATLLLMDNQSAMAIARNPAFHARTKHIDVRYHFLREKVEAGAINLQYVPTGDQVADVLTKGLVKAKHDK 1127
BLAST of mRNA_H-paniculata_contig16548.3724.1 vs. uniprot
Match: A0A6D2JBX5_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JBX5_9BRAS) HSP 1 Score: 140 bits (354), Expect = 1.830e-37 Identity = 71/145 (48.97%), Postives = 98/145 (67.59%), Query Frame = 1
Query: 25 GFIDADWEEDVEDRKSRTGYVFKLNGGAISWCSRKQQLVTWSSTEPEYFAAGEAGKETVYLRELLGSIGFGCRGSRTLFEDNKSAINLSKGSGAHCRTKHIGVRWHVIREWIRE-VLALKYVQTGDQLADILTKGLSRVKFQRLR 456
GF+D+D+ DV+DRKS +GYVF L GGA+SW S+KQ +VT S+TE E+ AA + ++LR +LG IG+ TLF DN S I LSK H R+KHI VR++ +R+ + E V+ LK+ T DQL+DI+TK + F+RLR
Sbjct: 222 GFVDSDYAGDVDDRKSTSGYVFMLGGGAVSWASKKQPIVTLSTTEAEFVAAAYGACQAMWLRNILGEIGWAQEEGTTLFCDNSSTIKLSKNPVLHGRSKHIHVRYYFLRDLVNEEVILLKFCGTEDQLSDIMTKAVKLEVFERLR 366
BLAST of mRNA_H-paniculata_contig16548.3724.1 vs. uniprot
Match: A0A060SU91_PYCCI (Uncharacterized protein n=2 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SU91_PYCCI) HSP 1 Score: 138 bits (348), Expect = 1.910e-37 Identity = 79/155 (50.97%), Postives = 97/155 (62.58%), Query Frame = 1
Query: 25 GFIDADWEEDVEDRKSRTGYVFKLNGGAISWCSRKQQLVTWSSTEPEYFAAGEAGKETVYLRELLGSIG---FGCRGSRT----LFEDNKSAINLSKGSGAHCRTKHIGVRWHVIREWI-REVLALKYVQTGDQLADILTKGLSRVKFQRLRNLL 465
G+ DADW D DR+S + YVFKL GGAISWCSRKQQ + SSTE EY A A KE ++L LL + F SR + DN+SA+ L+K S H RTKHI VR H IR+ + R L ++YV TGDQ+AD+LTK L+R K NLL
Sbjct: 127 GYSDADWAGDRNDRRSTSAYVFKLGGGAISWCSRKQQSIAQSSTEAEYVALALAAKEGLWLSTLLSDLDSPVFHALSSRLQVPLILVDNQSAMALAKNSSFHDRTKHIAVRHHFIRDELERGTLTVEYVPTGDQVADVLTKSLAREKHTYFTNLL 281
BLAST of mRNA_H-paniculata_contig16548.3724.1 vs. uniprot
Match: A0A4Y9ZSL8_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZSL8_9AGAM) HSP 1 Score: 138 bits (347), Expect = 8.060e-37 Identity = 68/143 (47.55%), Postives = 90/143 (62.94%), Query Frame = 1
Query: 25 GFIDADWEEDVEDRKSRTGYVFKLNGGAISWCSRKQQLVTWSSTEPEYFAAGEAGKETVYLRELLGSIGFGCRGSRTLFEDNKSAINLSKGSGAHCRTKHIGVRWHVIREWIRE-VLALKYVQTGDQLADILTKGLSRVKFQR 450
G++DADW DV DR+S +GY F L GGAISW S+KQ SSTE EY A A KE +LR L IG C+ + L DN+SA+ ++ H RTKHI +R+H +RE + + L+YV TGDQ+AD+L KGL + K +
Sbjct: 179 GYVDADWAGDVNDRRSISGYTFLLAGGAISWSSKKQNTTALSSTEAEYIVATHAAKEATWLRTFLSKIGRPCKAATLLLMDNQSAMAIAWNPAFHARTKHIDMRYHFLREKVEAGAINLQYVPTGDQVADVLMKGLVKAKHNK 321
BLAST of mRNA_H-paniculata_contig16548.3724.1 vs. uniprot
Match: A0A4Z0A7X3_9AGAM (Uncharacterized protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Z0A7X3_9AGAM) HSP 1 Score: 135 bits (340), Expect = 8.500e-37 Identity = 68/143 (47.55%), Postives = 90/143 (62.94%), Query Frame = 1
Query: 25 GFIDADWEEDVEDRKSRTGYVFKLNGGAISWCSRKQQLVTWSSTEPEYFAAGEAGKETVYLRELLGSIGFGCRGSRTLFEDNKSAINLSKGSGAHCRTKHIGVRWHVIREWIRE-VLALKYVQTGDQLADILTKGLSRVKFQR 450
G++DADW DV DR S +GY F L GGAISW S+KQ + SSTE EY AA A KE +L L IG C+ + L DN+SA+ ++ H +TKHI VR+H +RE + + L+YV GDQ+AD+LTKGL + K +
Sbjct: 81 GYVDADWAGDVNDRHSISGYTFLLAGGAISWSSKKQNMTALSSTEAEYIAAAHAAKEATWLCTFLSEIGRPCKAATLLLMDNQSAMAIAWNPVFHVQTKHIDVRYHFLREKVEAGAINLQYVPMGDQVADVLTKGLVKAKHDK 223
BLAST of mRNA_H-paniculata_contig16548.3724.1 vs. uniprot
Match: A0A7D9KIP6_PARCT (Uncharacterized protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KIP6_PARCT) HSP 1 Score: 132 bits (333), Expect = 1.290e-36 Identity = 62/147 (42.18%), Postives = 95/147 (64.63%), Query Frame = 1
Query: 25 GFIDADWEEDVEDRKSRTGYVFKLNGGAISWCSRKQQLVTWSSTEPEYFAAGEAGKETVYLRELLGSIGFGCRGSRTLFEDNKSAINLSKGSGAHCRTKHIGVRWHVIREWI-REVLALKYVQTGDQLADILTKGLSRVKFQRLRNL 462
GF DADW D+ DRKS +GY F++NG A+SW S+KQ V S+ E +Y A A +E +++R+LL + T++EDN+SAI +SK H R+KHI +++H +R+ + ++ L + Y TG LAD+ TKG+ + +F +LR L
Sbjct: 8 GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAEAKYVALSAAAQEALWMRQLLTDLNVNFDEQMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYHFVRDQVEKKTLTVLYCPTGSMLADLFTKGIPKEQFTKLREL 154
BLAST of mRNA_H-paniculata_contig16548.3724.1 vs. uniprot
Match: UPI0009AB427F (uncharacterized protein LOC109950541 n=1 Tax=Prunus persica TaxID=3760 RepID=UPI0009AB427F) HSP 1 Score: 137 bits (344), Expect = 2.150e-36 Identity = 69/156 (44.23%), Postives = 107/156 (68.59%), Query Frame = 1
Query: 1 KSNGHGQEGFIDADWEEDVEDRKSRTGYVFKLNGGAISWCSRKQQLVTWSSTEPEYFAAGEAGKETVYLRELLGSIGFGCRGSRTLFEDNKSAINLSKGSGAHCRTKHIGVRWHVIREWIR-EVLALKYVQTGDQLADILTKGLSRVKFQRLRNLL 465
+ +G G G+ D+D+ D++DRKS +G++F LN GAISW S+KQQ+VT SSTE EY AA + + ++LR++ +G +G T++ DN S I LS+ H R+KHI VR+H +R+ E + L+Y ++G+Q+ADILTK L + F++LR++L
Sbjct: 158 REDGSGFVGYTDSDYAGDIDDRKSTSGHIFLLNSGAISWSSKKQQIVTLSSTEAEYVAAAASSCQAMWLRKIFEVLGNVQKGPTTIYCDNISTIKLSRNPVMHGRSKHIDVRFHFLRDLCSDEKIVLEYCKSGEQVADILTKPLKQPAFEKLRSML 313
BLAST of mRNA_H-paniculata_contig16548.3724.1 vs. uniprot
Match: UPI001AE8F203 (secreted RxLR effector protein 161-like n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=UPI001AE8F203) HSP 1 Score: 135 bits (339), Expect = 2.350e-36 Identity = 71/155 (45.81%), Postives = 97/155 (62.58%), Query Frame = 1
Query: 1 KSNGHGQEGFIDADWEEDVEDRKSRTGYVFKLNGGAISWCSRKQQLVTWSSTEPEYFAAGEAGKETVYLRELLGSIGFGCRGSRTLFEDNKSAINLSKGSGAHCRTKHIGVRWHVIREWIR-EVLALKYVQTGDQLADILTKGLSRVKFQRLRNL 462
KSN GF D+DW D +DRKS +GY+F N G ISW S+KQ+ V S+ + EY A A +E +++R LL +I C +FEDN+S I+L+K H R KHI +R+H RE + + L Y Q+ D +AD+LTKGLS+VKF +L NL
Sbjct: 96 KSNKGELVGFSDSDWAGDHDDRKSTSGYIFLYNEGPISWKSQKQRSVALSTVKAEYMALSAASQECIWIRNLLCNIERSCDSPTVIFEDNQSTISLTKNPQYHGRAKHIDIRYHFTRELVEANKITLVYCQSEDMVADMLTKGLSKVKFVKLLNL 250 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16548.3724.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16548.3724.1 >prot_H-paniculata_contig16548.3724.1 ID=prot_H-paniculata_contig16548.3724.1|Name=mRNA_H-paniculata_contig16548.3724.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=157bp KSNGHGQEGFIDADWEEDVEDRKSRTGYVFKLNGGAISWCSRKQQLVTWSback to top mRNA from alignment at H-paniculata_contig16548:126..596+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16548.3724.1 ID=mRNA_H-paniculata_contig16548.3724.1|Name=mRNA_H-paniculata_contig16548.3724.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=471bp|location=Sequence derived from alignment at H-paniculata_contig16548:126..596+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16548:126..596+ >mRNA_H-paniculata_contig16548.3724.1 ID=mRNA_H-paniculata_contig16548.3724.1|Name=mRNA_H-paniculata_contig16548.3724.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=942bp|location=Sequence derived from alignment at H-paniculata_contig16548:126..596+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |