mRNA_H-paniculata_contig16498.3701.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16498.3701.1 vs. uniprot
Match: D7G5G9_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G9_ECTSI) HSP 1 Score: 63.5 bits (153), Expect = 1.640e-10 Identity = 31/45 (68.89%), Postives = 36/45 (80.00%), Query Frame = 1
Query: 10 QAQLPVGPETLRYGTSDAGKTVHNEDRELEDKLKAAAVKLNVRSH 144
QA LPV E+LRYG+S+ GKTVHNED L KLKAAA KLN+R+H
Sbjct: 382 QAVLPVNKESLRYGSSNGGKTVHNEDESLAKKLKAAAKKLNLRTH 426
BLAST of mRNA_H-paniculata_contig16498.3701.1 vs. uniprot
Match: D8LF64_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF64_ECTSI) HSP 1 Score: 62.4 bits (150), Expect = 2.000e-10 Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 1
Query: 10 QAQLPVGPETLRYGTSDAGKTVHNEDRELEDKLKAAAVKLNVRSH 144
QA LPV ETLRYG+SDAG+TVHN+ L KLKA A KLN+R+H
Sbjct: 146 QAVLPVSSETLRYGSSDAGRTVHNDSENLAKKLKAVAKKLNLRTH 190
BLAST of mRNA_H-paniculata_contig16498.3701.1 vs. uniprot
Match: A0A6H5KFE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFE7_9PHAE) HSP 1 Score: 59.7 bits (143), Expect = 3.730e-9 Identity = 29/45 (64.44%), Postives = 34/45 (75.56%), Query Frame = 1
Query: 10 QAQLPVGPETLRYGTSDAGKTVHNEDRELEDKLKAAAVKLNVRSH 144
QA LPV E+LRYG+ D GKTVHN+D L KLKAAA KLN+ +H
Sbjct: 67 QAVLPVNKESLRYGSDDGGKTVHNDDESLAKKLKAAAKKLNLCTH 111
BLAST of mRNA_H-paniculata_contig16498.3701.1 vs. uniprot
Match: A0A2P6NM88_9EUKA (Clu domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NM88_9EUKA) HSP 1 Score: 52.0 bits (123), Expect = 1.960e-6 Identity = 23/48 (47.92%), Postives = 32/48 (66.67%), Query Frame = 1
Query: 1 IIQQAQLPVGPETLRYGTSDAGKTVHNEDRELEDKLKAAAVKLNVRSH 144
++ A LP+ TLRYG+ DAG+ VH ED EL +K+K A +LN+ H
Sbjct: 390 VLAMAILPIDRSTLRYGSDDAGRHVHMEDEELNEKMKLAGERLNLAGH 437
BLAST of mRNA_H-paniculata_contig16498.3701.1 vs. uniprot
Match: Q54JI4_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54JI4_DICDI) HSP 1 Score: 52.0 bits (123), Expect = 1.960e-6 Identity = 22/48 (45.83%), Postives = 35/48 (72.92%), Query Frame = 1
Query: 1 IIQQAQLPVGPETLRYGTSDAGKTVHNEDRELEDKLKAAAVKLNVRSH 144
+I + LP+ +T++YG+SD+G TVHN +L +K+K A KLN++SH
Sbjct: 453 LIALSVLPISSDTIKYGSSDSGSTVHNSIPDLNEKMKEAGRKLNLKSH 500
BLAST of mRNA_H-paniculata_contig16498.3701.1 vs. uniprot
Match: L8H9K5_ACACA (Leucine rich repeat domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H9K5_ACACA) HSP 1 Score: 50.1 bits (118), Expect = 9.400e-6 Identity = 23/48 (47.92%), Postives = 32/48 (66.67%), Query Frame = 1
Query: 1 IIQQAQLPVGPETLRYGTSDAGKTVHNEDRELEDKLKAAAVKLNVRSH 144
++ QA LP+G +TL YG+SDAG V + RE+E L AA +LN+ H
Sbjct: 735 LVAQALLPIGDDTLVYGSSDAGVNVRTDSREIEKALAAACYELNLAKH 782
BLAST of mRNA_H-paniculata_contig16498.3701.1 vs. uniprot
Match: UPI0006447C47 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006447C47) HSP 1 Score: 47.8 bits (112), Expect = 6.170e-5 Identity = 20/48 (41.67%), Postives = 35/48 (72.92%), Query Frame = 1
Query: 1 IIQQAQLPVGPETLRYGTSDAGKTVHNEDRELEDKLKAAAVKLNVRSH 144
+I + LP+ ET+RYG+SD+G VH++ +EL +K+ AA +N+++H
Sbjct: 353 LIALSLLPINSETIRYGSSDSGTIVHDDIKELSEKMNEAARIINLKAH 400
BLAST of mRNA_H-paniculata_contig16498.3701.1 vs. uniprot
Match: F0ZL85_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZL85_DICPU) HSP 1 Score: 47.8 bits (112), Expect = 6.170e-5 Identity = 20/48 (41.67%), Postives = 34/48 (70.83%), Query Frame = 1
Query: 1 IIQQAQLPVGPETLRYGTSDAGKTVHNEDRELEDKLKAAAVKLNVRSH 144
+I + LP+ ET++YG+SD+G VH+ +L +K+K A KLN+++H
Sbjct: 352 LIALSVLPISNETIKYGSSDSGSIVHSNIPDLNEKMKEAGKKLNLKAH 399
BLAST of mRNA_H-paniculata_contig16498.3701.1 vs. uniprot
Match: A0A2P6NZB8_9EUKA (Clu domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NZB8_9EUKA) HSP 1 Score: 47.4 bits (111), Expect = 8.430e-5 Identity = 19/48 (39.58%), Postives = 33/48 (68.75%), Query Frame = 1
Query: 1 IIQQAQLPVGPETLRYGTSDAGKTVHNEDRELEDKLKAAAVKLNVRSH 144
++ LP+ TL+YG++DAG T+H +D L +K++ A +LN+R+H
Sbjct: 515 LLAMPVLPIDKTTLKYGSNDAGATIHADDEVLNEKIEEACRRLNLRAH 562
BLAST of mRNA_H-paniculata_contig16498.3701.1 vs. uniprot
Match: F4PYX7_CAVFA (Histidine kinase A n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PYX7_CAVFA) HSP 1 Score: 47.4 bits (111), Expect = 8.450e-5 Identity = 20/48 (41.67%), Postives = 32/48 (66.67%), Query Frame = 1
Query: 1 IIQQAQLPVGPETLRYGTSDAGKTVHNEDRELEDKLKAAAVKLNVRSH 144
++ + LP+ ET+ YG+SD G TVH+ED +K+K +A LN++ H
Sbjct: 575 LVAMSLLPINSETIVYGSSDGGITVHSEDPGFNEKMKQSAQALNLKGH 622 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16498.3701.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16498.3701.1 >prot_H-paniculata_contig16498.3701.1 ID=prot_H-paniculata_contig16498.3701.1|Name=mRNA_H-paniculata_contig16498.3701.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=48bp IIQQAQLPVGPETLRYGTSDAGKTVHNEDRELEDKLKAAAVKLNVRSHback to top mRNA from alignment at H-paniculata_contig16498:746..889+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16498.3701.1 ID=mRNA_H-paniculata_contig16498.3701.1|Name=mRNA_H-paniculata_contig16498.3701.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=144bp|location=Sequence derived from alignment at H-paniculata_contig16498:746..889+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16498:746..889+ >mRNA_H-paniculata_contig16498.3701.1 ID=mRNA_H-paniculata_contig16498.3701.1|Name=mRNA_H-paniculata_contig16498.3701.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=288bp|location=Sequence derived from alignment at H-paniculata_contig16498:746..889+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |