mRNA_H-paniculata_contig16493.3699.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16493.3699.1 vs. uniprot
Match: D8LLD3_ECTSI (SPX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLD3_ECTSI) HSP 1 Score: 269 bits (687), Expect = 2.390e-76 Identity = 127/194 (65.46%), Postives = 161/194 (82.99%), Query Frame = 3
Query: 45 PSDTTPETLSNSQSEVEFFRLMDYEIRRGAQFLSLAEGQYVLKTRIVLDGCRTTQHLLQSPMLGLDVMLTPAVATAMWMRLLQACISVYTELLLLNHWVVMSYCGFTKILKKHDRWTGFMTKEKYLRTVVAKQHYTSYPRLYRMIQDMDTLYMHIGKQIPDCPERVAAHAKIVAVKESVSSAVKDFSKYTSELT 626
PS TTPE L++SQ EVEFFR+MD+EIRRGAQFL+L+EGQYV+KTRIVLDG ++TQHLLQSP LGL+ M++ AT MW+RL+ AC SVY ELLLLNHWV++SYCGF+KILKKHDRWT F TKEKY+R VVAKQH+TSYP+L+ M++DM+ LY HI ++P+C ER A A++ A+K+ V+ A +FS + ELT
Sbjct: 46 PSATTPEALASSQQEVEFFRMMDHEIRRGAQFLALSEGQYVIKTRIVLDGYQSTQHLLQSPRLGLEGMISDETATEMWIRLMDACTSVYRELLLLNHWVIVSYCGFSKILKKHDRWTHFNTKEKYMRLVVAKQHFTSYPKLHAMLRDMEALYTHISNRLPECAERAEAEARMNAIKQVVALAAAEFSPHAEELT 239
BLAST of mRNA_H-paniculata_contig16493.3699.1 vs. uniprot
Match: A0A6H5JPI1_9PHAE (SPX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPI1_9PHAE) HSP 1 Score: 239 bits (609), Expect = 4.860e-66 Identity = 112/174 (64.37%), Postives = 144/174 (82.76%), Query Frame = 3
Query: 105 LMDYEIRRGAQFLSLAEGQYVLKTRIVLDGCRTTQHLLQSPMLGLDVMLTPAVATAMWMRLLQACISVYTELLLLNHWVVMSYCGFTKILKKHDRWTGFMTKEKYLRTVVAKQHYTSYPRLYRMIQDMDTLYMHIGKQIPDCPERVAAHAKIVAVKESVSSAVKDFSKYTSELT 626
+MD+EIRRGAQFL+L+EGQYV+KTRIVLDG ++T+HLLQSP LGL+ +++ AT MW+RL+ AC SVY ELLLLNHWV++SYCGF+KILKKHDRWT F TKEKY+R VVAKQH TSYP+L+ M++DM+ L+ HI ++P+CPER A AK+ A+K+ V+ A FS +T ELT
Sbjct: 1 MMDHEIRRGAQFLALSEGQYVIKTRIVLDGYQSTKHLLQSPRLGLEGVISDETATEMWLRLMDACTSVYRELLLLNHWVIVSYCGFSKILKKHDRWTHFNTKEKYMRLVVAKQHCTSYPKLHAMLRDMEALFTHISNRLPECPERAEAEAKMNAIKQVVALAAAGFSPHTEELT 174
BLAST of mRNA_H-paniculata_contig16493.3699.1 vs. uniprot
Match: A0A835YXF1_9STRA (SPX domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXF1_9STRA) HSP 1 Score: 125 bits (313), Expect = 8.380e-26 Identity = 62/125 (49.60%), Postives = 82/125 (65.60%), Query Frame = 3
Query: 126 RGAQFLSLAEGQYVLKTRIVLDGCRTTQHLLQSPMLGLDVMLTPAVATAMWMRLLQACISVYTELLLLNHWVVMSYCGFTKILKKHDRWTGFMTKEKYLRTVVAKQHYTSYPRLYRMIQDMDTLY 500
R A F E Q+ L+ R V + R T+ LL + LGLD + MW ++AC+SVY ELLLL HW+VMSYCGF+KILKKHDRWTG+MT+EKY+ VVA+Q +T +L M+ +D L+
Sbjct: 236 RWAAFFLNVEQQFTLRMRAVEESLRYTKFLLDNKSLGLDSGFSDEFRAEMWTANMRACVSVYRELLLLEHWIVMSYCGFSKILKKHDRWTGYMTREKYMERVVAQQPFTQCSQLIAMLTTIDRLF 360
BLAST of mRNA_H-paniculata_contig16493.3699.1 vs. uniprot
Match: A0A835Z5J1_9STRA (SPX domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5J1_9STRA) HSP 1 Score: 104 bits (259), Expect = 2.140e-21 Identity = 55/153 (35.95%), Postives = 93/153 (60.78%), Query Frame = 3
Query: 54 TTPETLSNSQSEVEFFRLMDYEIRRGAQFLSLAEGQYVLKTRIVLDGCRTTQHLLQSPMLGLDVMLTPAVATAMWMRLLQACISVYTELLLLNHWVVMSYCGFTKILKKHDRWTGFMTKEKYLRTVV-AKQHYTSYPRLYRMIQDMDTLYMHI 509
++PE LS S EV FF+ + E+R+ +F + AE Q++++ V +G R + + P+ G + RL+ AC+ +Y +LLLL ++ +M+Y F+KILKKHD+ TGF T+E+Y++ VV +T YPR+ M++D++ L+ I
Sbjct: 56 SSPEALSKSAGEVAFFKFLRQELRKCKEFFASAESQFLVRRARVREGWRQLTAVPEVPVDG-----------EQYKRLMAACVRLYKDLLLLENFAIMNYTAFSKILKKHDKLTGFCTRERYMKNVVNMTTSFTHYPRVLEMLEDVEELFRGI 197
BLAST of mRNA_H-paniculata_contig16493.3699.1 vs. uniprot
Match: A0A8J2SU39_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SU39_9STRA) HSP 1 Score: 102 bits (254), Expect = 3.440e-20 Identity = 61/154 (39.61%), Postives = 89/154 (57.79%), Query Frame = 3
Query: 51 DTTPETLSNSQSEVEFFRLMDYEIRRGAQFLSLAEGQYVLKTRIVLDGCRTTQHLLQSPMLGLDVMLTPAVATAMWMRLLQACISVYTELLLLNHWVVMSYCGFTKILKKHDRWTGFMTKEKYLRTVVAKQHYTSYPRLYRMIQDMDTLYMHIG 512
D T++ S EV FFR + +E+++ AQF AE ++ V + R Q LGL L A R L+AC++ Y +LLLL ++ +M+YCGF+KILKKHD+ TGF T+ +++R VA Q +T YPRL MI++ + LY I
Sbjct: 52 DCEKATMAKSAPEVAFFRALRFELQKSAQFFRQAELVLEVRRERVREALRQLQD---EDRLGL---LEDAPD-----RALRACVTYYRDLLLLENYAIMNYCGFSKILKKHDKQTGFTTRTQFMRVCVAPQPFTRYPRLMEMIREAEDLYRDIA 194
BLAST of mRNA_H-paniculata_contig16493.3699.1 vs. uniprot
Match: D7G279_ECTSI (SPX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G279_ECTSI) HSP 1 Score: 100 bits (249), Expect = 1.390e-19 Identity = 53/150 (35.33%), Postives = 93/150 (62.00%), Query Frame = 3
Query: 60 PETLSNSQSEVEFFRLMDYEIRRGAQFLSLAEGQYVLKTRIVLDGCRTTQHLLQSPMLGLDVMLTPAVATAMWMRLLQACISVYTELLLLNHWVVMSYCGFTKILKKHDRWTGFMTKEKYLRTVVAKQHYTSYPRLYRMIQDMDTLYMHI 509
P+ ++ S EVEF+RL+ E+R+ ++F + EGQ ++ V +G R Q LL + ++ + RL+ AC+ +Y +LLLL ++ +M+YCGF+KILKKHD+ TGF T+E +++ VV + YP++ +M+ ++ L+ +I
Sbjct: 52 PQAMARSAGEVEFYRLLRQELRKCSEFFTGVEGQLGVRQARVNEGWR--QLLLPNVVVEGNPN----------KRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVKNAPFVQYPKVIKMLSAVEALFKNI 189
BLAST of mRNA_H-paniculata_contig16493.3699.1 vs. uniprot
Match: A0A7S2D364_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D364_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 1.150e-17 Identity = 47/158 (29.75%), Postives = 93/158 (58.86%), Query Frame = 3
Query: 45 PSDTTPETLSNSQSEVEFFRLMDYEIRRGAQFLSLAEGQYVLKTRIVLDGCRTTQHLLQSPMLGLDVMLTPAVATAMWMRLLQACISVYTELLLLNHWVVMSYCGFTKILKKHDRWTGFMTKEKYLRTVVAK-QHYTSYPRLYRMIQDMDTLYMHIGK 515
P +T+ +++ S E +FF+ + E+R+ ++F AE Q V++ + +G R + LD M+ + AC+ +Y +LL+L ++ ++++CGF+KILKKHD+ TGF+T+++++ V++ +H Y L R+I++ + L++ I K
Sbjct: 59 PHETSKRSITESIGERDFFKALHAELRKSSEFFRAAEQQMVIRIARIKEGARQLRETFTVTHENLDQMI------------MAACLKLYKDLLMLENYAIINFCGFSKILKKHDKNTGFVTRDRFMNNTVSRHEHLCKYEVLKRIIKETEDLFVEISK 204
BLAST of mRNA_H-paniculata_contig16493.3699.1 vs. uniprot
Match: A0A2D4BZZ0_PYTIN (SPX domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZZ0_PYTIN) HSP 1 Score: 95.5 bits (236), Expect = 3.940e-17 Identity = 53/162 (32.72%), Postives = 91/162 (56.17%), Query Frame = 3
Query: 18 MKTAVKDRLPSDTTPETLSNSQSEVEFFRLMDYEIRRGAQFLSLAEGQYVLKTRIVLDGCRTTQHLLQSPMLGLDVMLTPAVATAMWMRLLQACISVYTELLLLNHWVVMSYCGFTKILKKHDRWTGFMTKEKYLRTVVAKQHYTSYPRLYRMIQDMDTLYM 503
+KT +K D +++ S E+ FFR + EI++ F +G Y+ + + + + L P P T L++AC+S+Y ELLLL ++ VM++CG +KILKKHD+WTG+ T+ K++RT++ KQ + +Y L +MI ++ ++M
Sbjct: 50 IKTKIKPNAKEDN--DSIRTSPDEMNFFRTLRSEIKKIGDFFVREQGAYISRVKAIEEQY---MQLQSDP--------RPETKT----ELMKACVSLYKELLLLENFAVMNFCGISKILKKHDKWTGYATRNKFMRTILMKQPFATYLPLLQMIDRLEHIFM 194
BLAST of mRNA_H-paniculata_contig16493.3699.1 vs. uniprot
Match: K3WTX0_GLOUD (SPX domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTX0_GLOUD) HSP 1 Score: 93.2 bits (230), Expect = 2.900e-16 Identity = 51/162 (31.48%), Postives = 91/162 (56.17%), Query Frame = 3
Query: 18 MKTAVKDRLPSDTTPETLSNSQSEVEFFRLMDYEIRRGAQFLSLAEGQYVLKTRIVLDGCRTTQHLLQSPMLGLDVMLTPAVATAMWMRLLQACISVYTELLLLNHWVVMSYCGFTKILKKHDRWTGFMTKEKYLRTVVAKQHYTSYPRLYRMIQDMDTLYM 503
+KT +K D +++ S E+ FFR + EI++ A F V + + T + + +D+ +P T L+++C+S+Y ELLLL ++ VM++CG +KILKKHD+WTG+ T+ K++ T++ KQ + +Y L +MI ++ ++M
Sbjct: 50 VKTKIKPSAKEDN--DSIRKSPDEMNFFRTLRVEIKKVADFF-------------VQEQAKHTNQVAAIEQISIDLKASPKPETKT--ELMKSCVSLYKELLLLENFAVMNFCGISKILKKHDKWTGYATRHKFMHTILMKQPFATYVPLLQMIDRLEHIFM 194
BLAST of mRNA_H-paniculata_contig16493.3699.1 vs. uniprot
Match: A0A024GRD0_9STRA (SPX domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GRD0_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 4.010e-16 Identity = 50/149 (33.56%), Postives = 87/149 (58.39%), Query Frame = 3
Query: 63 ETLSNSQSEVEFFRLMDYEIRRGAQFLSLAEGQYVLKTRIVLDGCRTTQ--HLLQSPMLGLDVMLTPAVATAMWMRLLQACISVYTELLLLNHWVVMSYCGFTKILKKHDRWTGFMTKEKYLRTVVAKQHYTSYPRLYRMIQDMDTLYM 503
+T+ S E+ FFR + EI++ A F + ++ + G TQ L SP + ++ M L+++C++VY ELLLL ++ VM++CG +KILKKHD+WTG+ T+ K++ T++ KQ + +Y L +MI ++ ++M
Sbjct: 61 DTIRQSPDEMNFFRTLRVEIKKIATFFIREQAKFTGQI-----GALETQFQQLKTSP------------SASIQMELMKSCVNVYKELLLLENFAVMNFCGISKILKKHDKWTGYATRHKFMHTILMKQPFATYCPLLKMINRLEQIFM 192 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16493.3699.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16493.3699.1 >prot_H-paniculata_contig16493.3699.1 ID=prot_H-paniculata_contig16493.3699.1|Name=mRNA_H-paniculata_contig16493.3699.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=422bp MKTAVKDRLPSDTTPETLSNSQSEVEFFRLMDYEIRRGAQFLSLAEGQYVback to top mRNA from alignment at H-paniculata_contig16493:151..5858+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16493.3699.1 ID=mRNA_H-paniculata_contig16493.3699.1|Name=mRNA_H-paniculata_contig16493.3699.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5708bp|location=Sequence derived from alignment at H-paniculata_contig16493:151..5858+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16493:151..5858+ >mRNA_H-paniculata_contig16493.3699.1 ID=mRNA_H-paniculata_contig16493.3699.1|Name=mRNA_H-paniculata_contig16493.3699.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2532bp|location=Sequence derived from alignment at H-paniculata_contig16493:151..5858+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |