mRNA_H-paniculata_contig16486.3695.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16486.3695.1 vs. uniprot
Match: D8LNM6_ECTSI (DDE_3 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LNM6_ECTSI) HSP 1 Score: 356 bits (913), Expect = 6.470e-104 Identity = 185/289 (64.01%), Postives = 222/289 (76.82%), Query Frame = 3
Query: 3375 FIDDSVQKLKPRTGEVLCNVQSKLILMLLFALRKDGVSENQPVLQVASTFKIGHSKVSGVNNHWWDHNTLLETTGEGRGKVTKNDDGRRRITQDQEDQLYKFINDEHKAGRQVFRRTVEEWMMDHCNPDKEVSNRAVGGLLQRLGYRCRRGRIKTPPLDAKRLARIRLFLVEMNIAKRAEDAGLAVLVYMDESFVHQAHGSTYSYFPTDQNGVVEDEMDRTMGKGLRMIMVHESRSGARWLRVVPIISFKSKRVGLSVRKTIGESKGGKDFNMIDEKTAEFLWQAKLAK 4241
++D SV ++KP+ GEV ++QS+++LMLLF LRK+G SEN+ VLQVA TFKIGH KV +NNHWWDH L ETT GRGK+ K DDGRRR+T+ Q DQL +FINDEHKAGRQVFRRTV EW+ CN + + SNR+VGGLL RLGY+ RRGRIKTPPL+A+RLARIR FLVEM++AKRAEDAGLAV+VYMDESFVHQAHGS YSYFP+D+NGVV+D + RT GKGLRMIMVH +W P+ F G + + + G M DE+TAEFLWQAKLAK
Sbjct: 117 YMDTSVHEVKPKKGEVWTHLQSRMVLMLLFDLRKEGRSENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAAGRGKMAKEDDGRRRLTEVQADQLREFINDEHKAGRQVFRRTVAEWVHRTCNME-QPSNRSVGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDENGVVQDGIGRTTGKGLRMIMVHAI---TKW---GPLAKFCD---GFPIEEGWFKETGSGKKKMEDEETAEFLWQAKLAK 395
BLAST of mRNA_H-paniculata_contig16486.3695.1 vs. uniprot
Match: A0A6H5KAU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAU4_9PHAE) HSP 1 Score: 343 bits (881), Expect = 4.150e-102 Identity = 179/289 (61.94%), Postives = 214/289 (74.05%), Query Frame = 3
Query: 3375 FIDDSVQKLKPRTGEVLCNVQSKLILMLLFALRKDGVSENQPVLQVASTFKIGHSKVSGVNNHWWDHNTLLETTGEGRGKVTKNDDGRRRITQDQEDQLYKFINDEHKAGRQVFRRTVEEWMMDHCNPDKEVSNRAVGGLLQRLGYRCRRGRIKTPPLDAKRLARIRLFLVEMNIAKRAEDAGLAVLVYMDESFVHQAHGSTYSYFPTDQNGVVEDEMDRTMGKGLRMIMVHESRSGARWLRVVPIISFKSKRVGLSVRKTIGESKGGKDFNMIDEKTAEFLWQAKLAK 4241
++D SV ++KP+ EV +QS+++LMLLF LRK G EN+ VLQVA TFKIGH KV +NNHWWDH L ETT GRGK K DDGRRR+T+ QEDQL +FINDEHKAGRQVFRRTV EWM CN + + SNR+ GGLL RLGY+ RRGRIKTPPL+A+RLARIR FLVEM++AKRAEDAGLAV+VYMDESFVHQAHGS SYFP+D++GVV+D + RT GKGLRMIMVH +W + + G + + + G M DE+TAEFLWQ KLAK
Sbjct: 56 YMDTSVHEVKPKKDEVWTQLQSRMVLMLLFDLRKGGCCENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNME-QPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPCSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAI---TKWGPLAKLC------YGFPIEEGWFKETGSGKKEMEDEETAEFLWQVKLAK 334
BLAST of mRNA_H-paniculata_contig16486.3695.1 vs. uniprot
Match: A0A6H5JMA8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA8_9PHAE) HSP 1 Score: 342 bits (876), Expect = 7.480e-101 Identity = 193/326 (59.20%), Postives = 230/326 (70.55%), Query Frame = 3
Query: 3270 EAARKTACAEQREQEVVEA--AAHAAQQPKLSQAAHTFIDDSVQKLKPRTGEVLCNVQSKLILMLLFALRKDGVSENQPVLQVASTFKIGHSKVSGVNNHWWDHNTLLETTGEGRGKVTKNDDGRRRITQDQEDQLYKFINDEHKAGRQVFRRTVEEWMMDHCNPDKEVSNRAVGGLLQRLGYRCRRGRIKTPPLDAKRLARIRLFLVEMNIAKRAEDAGLAVLVYMDESFVHQAHGSTYSYFPTDQNGVVEDEMDRTMGKGLRMIMVHESRSGARWLRVVPIISFKSKRVGLSVRKTIGESKGGKDFNMIDEKTAEFLWQAKLAK 4241
E AR A E REQ+ VE AA AA K++Q ++D SV ++KP+ GEV +QS+++LMLLF LRK G SE + VL+VA TFKIGH KV +NNHWWDH L ETT GRGK K DDGRRR+T+ QEDQL +FINDEHKAGRQVFRRTV EWM CN + + SN + GGLL RLG + RRGRIKTPPL A+RLARIR FLVEM +AKRAEDAGLAV+VY+DESFVHQAHGS YSYFP+D +GVV+D + RT GKGLRMIMVH +W + + GL + + + G M DE+T EFLWQA LAK
Sbjct: 113 EMARAAAPREMREQQDVERVQAAAAAAAEKVAQGLD-YMDTSVHEVKPKKGEVWTQLQSRMVLMLLFDLRKGGCSEKEAVLKVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNME-QPSNGSAGGLLSRLGCKRRRGRIKTPPLKAERLARIRRFLVEMVMAKRAEDAGLAVIVYVDESFVHQAHGSPYSYFPSDDDGVVQDGIGRTTGKGLRMIMVHAI---TKWGPLAKLCD------GLPIEEGWFKETGSGKKEMEDEETVEFLWQATLAK 427
BLAST of mRNA_H-paniculata_contig16486.3695.1 vs. uniprot
Match: A0A6H5KIM5_9PHAE (DDE_3 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIM5_9PHAE) HSP 1 Score: 328 bits (841), Expect = 2.430e-94 Identity = 172/269 (63.94%), Postives = 202/269 (75.09%), Query Frame = 3
Query: 3435 QSKLILMLLFALRKDGVSENQPVLQVASTFKIGHSKVSGVNNHWWDHNTLLETTGEGRGKVTKNDDGRRRITQDQEDQLYKFINDEHKAGRQVFRRTVEEWMMDHCNPDKEVSNRAVGGLLQRLGYRCRRGRIKTPPLDAKRLARIRLFLVEMNIAKRAEDAGLAVLVYMDESFVHQAHGSTYSYFPTDQNGVVEDEMDRTMGKGLRMIMVHESRSGARWLRVVPIISFKSKRVGLSVRKTIGESKGGKDFNMIDEKTAEFLWQAKLAK 4241
+S+++LMLLF LRK G SE + VL+VA TFKIGH KV +NNHWWDH L E T GRGK K DDGRRR+T+ QEDQL +FINDEHKAGRQVFRRTV EWM CN + + SNR+ GGLL RLGY+ RRGRIKTPPL+A+RLARIR FLVEM +AKRAEDAGLAV+VYMDESFVHQAHGS YSYFP+D++GVV+D + RT GKGLRMIMVH +W + + GL + + + G M DE+TAEFLWQAKLAK
Sbjct: 103 ESRMVLMLLFDLRKGGCSEKEAVLKVARTFKIGHDKVRRINNHWWDHRQLYEITAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNME-QPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMVMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAI---TKWGPLAKLCD------GLPIEEGWFKETGSGKKEMEDEETAEFLWQAKLAK 361
BLAST of mRNA_H-paniculata_contig16486.3695.1 vs. uniprot
Match: A0A6H5KKL0_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKL0_9PHAE) HSP 1 Score: 321 bits (823), Expect = 5.810e-94 Identity = 169/266 (63.53%), Postives = 200/266 (75.19%), Query Frame = 3
Query: 3444 LILMLLFALRKDGVSENQPVLQVASTFKIGHSKVSGVNNHWWDHNTLLETTGEGRGKVTKNDDGRRRITQDQEDQLYKFINDEHKAGRQVFRRTVEEWMMDHCNPDKEVSNRAVGGLLQRLGYRCRRGRIKTPPLDAKRLARIRLFLVEMNIAKRAEDAGLAVLVYMDESFVHQAHGSTYSYFPTDQNGVVEDEMDRTMGKGLRMIMVHESRSGARWLRVVPIISFKSKRVGLSVRKTIGESKGGKDFNMIDEKTAEFLWQAKLAK 4241
++LMLLF LRK+G +EN+ VLQVA TFKIGH KV +NNHWWDH L ETT GRGK K DDGRRR+T+ QEDQL +FINDEHKAGRQVFRRTV EWM CN + + SNR+ GLL RLGY+ RRGRIKTPPL+A+RLARIR FLVEM++AKRAEDAGLAV+VY+D SFVHQAHGS YSYFP D++ VV+D + RT GKGLR+IMVH +W + + VGL + + + G M DE+TAEFLWQAKLAK
Sbjct: 1 MVLMLLFDLRKEGRAENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNME-QPSNRSAEGLLSRLGYKGRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYIDGSFVHQAHGSPYSYFPADEDEVVQDGIGRTTGKGLRVIMVHAI---TKWGPLAKLC------VGLPIEEGWFKETGSGKREMEDEETAEFLWQAKLAK 256
BLAST of mRNA_H-paniculata_contig16486.3695.1 vs. uniprot
Match: A0A6H5JWS3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWS3_9PHAE) HSP 1 Score: 299 bits (766), Expect = 9.970e-89 Identity = 158/245 (64.49%), Postives = 182/245 (74.29%), Query Frame = 3
Query: 3507 QVASTFKIGHSKVSGVNNHWWDHNTLLETTGEGRGKVTKNDDGRRRITQDQEDQLYKFINDEHKAGRQVFRRTVEEWMMDHCNPDKEVSNRAVGGLLQRLGYRCRRGRIKTPPLDAKRLARIRLFLVEMNIAKRAEDAGLAVLVYMDESFVHQAHGSTYSYFPTDQNGVVEDEMDRTMGKGLRMIMVHESRSGARWLRVVPIISFKSKRVGLSVRKTIGESKGGKDFNMIDEKTAEFLWQAKLAK 4241
QVA TFKIGH KV +NNHWWDH L ETT GRGK K DDGRRR+T+ QEDQL +FINDEH+AGRQV RRTV EWM CN + + SNR+ GGLL RLGY+ RRGRIKTPPL+A+RLARIR FLVEM +AKRAEDAGLAV+VYMDESFVHQAHGS YSYFP+D +GVV+D + RT GKGLRMIMVH +W + + GL + + + G M DE+TAEFLWQAKLAK
Sbjct: 32 QVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHQAGRQVSRRTVAEWMHRTCNME-QPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMVMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDDDGVVQDGIGRTTGKGLRMIMVHAI---TKWGPLAKLCD------GLPIEEGWFKETGSGKKEMEDEETAEFLWQAKLAK 266
BLAST of mRNA_H-paniculata_contig16486.3695.1 vs. uniprot
Match: A0A6H5KDX2_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX2_9PHAE) HSP 1 Score: 312 bits (800), Expect = 1.020e-88 Identity = 183/319 (57.37%), Postives = 220/319 (68.97%), Query Frame = 3
Query: 3297 EQREQEVVEAAAHAAQQPKLSQAAHTFIDDSVQKLKPRTGEVLCNVQSKLILMLLFALRKDGVSENQPVLQVASTFKIGHSKVSGVNNHWWDHNTLLETTGEGRGKVTKNDDGRRRITQDQEDQLYKFINDEHKAGRQVFRRTVEEWMMDHCNPDKEVSNRAVGGLLQRLGYRCRRGRIKTPPLDAKRLARIRLFLVEMNIAKRAEDAGLAVLVYMDESFVHQAHGSTYSYFPTDQNGVVEDEMDRTMGKGLRMIMVH---ESRSGARWLRVVPIIS--FKSKRVGLSVRKTIGESKGGKDFNMIDEKTAEFLWQAKLA 4238
E+REQ+ V AA AA KL A F++DSVQ L+P+TGE+ QS++ILML F L K G SEN QVA T +IG KV V W+D L ET G+GRGK T DDGRR IT++QED L +FI EH+AGRQVFRRTV++++ C+ E+SNRAVGGLLQRLG++ RRGRIK PPL+ +R RIRLFLV+M++AKRAEDAG+AV+VYMDESFVHQAHGS YSYFP+D G+V+D + RT GKGLRMIMVH E A PI FK+K K G DF M DE+TAEFLWQAKLA
Sbjct: 58 ERREQDRVSKAAEAATS-KLPPLALKFVEDSVQSLRPKTGELTTLQQSRIILMLYFDLVKGGSSENHAKEQVAKTLRIGTDKVLAVRTLWYDKQELYETNGKGRGKATSVDDGRRVITKEQEDGLREFIKGEHEAGRQVFRRTVKDYL--ECSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGIAVIVYMDESFVHQAHGSAYSYFPSDDKGIVQDGIGRTTGKGLRMIMVHAITEHGPLAELQEGFPIREGWFKAKENRAKKIKP-----GEADFEMSDEQTAEFLWQAKLA 368
BLAST of mRNA_H-paniculata_contig16486.3695.1 vs. uniprot
Match: A0A6H5KDX7_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX7_9PHAE) HSP 1 Score: 306 bits (785), Expect = 1.460e-88 Identity = 160/246 (65.04%), Postives = 186/246 (75.61%), Query Frame = 3
Query: 3504 LQVASTFKIGHSKVSGVNNHWWDHNTLLETTGEGRGKVTKNDDGRRRITQDQEDQLYKFINDEHKAGRQVFRRTVEEWMMDHCNPDKEVSNRAVGGLLQRLGYRCRRGRIKTPPLDAKRLARIRLFLVEMNIAKRAEDAGLAVLVYMDESFVHQAHGSTYSYFPTDQNGVVEDEMDRTMGKGLRMIMVHESRSGARWLRVVPIISFKSKRVGLSVRKTIGESKGGKDFNMIDEKTAEFLWQAKLAK 4241
+QVA TFKIGH KV +NNHWWDH L ETT GRGK K DDGRRR+T+ QEDQL +FINDEHKAGRQVFRRTV EWM CN + + SNR+ GGLL RLGY+ RRGRIKTPPL+A+RLARIR FLVEM++AKRAEDAGLAV+VYMDESFVHQAHGS YSYFP+D++GVV+D + RT GKGLRMIMVH +W + + GL + + + G M DE+TAEFLWQAKLAK
Sbjct: 9 VQVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNME-QPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAI---TKWGPLAKLCD------GLPIEEGWFKETGSGKKEMEDEETAEFLWQAKLAK 244
BLAST of mRNA_H-paniculata_contig16486.3695.1 vs. uniprot
Match: A0A6H5JR41_9PHAE (DDE_3 domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR41_9PHAE) HSP 1 Score: 302 bits (773), Expect = 5.920e-85 Identity = 160/246 (65.04%), Postives = 185/246 (75.20%), Query Frame = 3
Query: 3504 LQVASTFKIGHSKVSGVNNHWWDHNTLLETTGEGRGKVTKNDDGRRRITQDQEDQLYKFINDEHKAGRQVFRRTVEEWMMDHCNPDKEVSNRAVGGLLQRLGYRCRRGRIKTPPLDAKRLARIRLFLVEMNIAKRAEDAGLAVLVYMDESFVHQAHGSTYSYFPTDQNGVVEDEMDRTMGKGLRMIMVHESRSGARWLRVVPIISFKSKRVGLSVRKTIGESKGGKDFNMIDEKTAEFLWQAKLAK 4241
+QVA TFKIGH KV +NNHWWDH L ETT GRGK K DDGRRR+T+ QEDQL +FINDEHKAGRQVFRRTV EWM CN + + SNR+ GGLL RLGY+ RRGRIKTPPL+A+RLARIR FLV MN+AKRAEDAGLAV+VYMDESFVHQAHGS YSYFP+D++GVV+D + RT GKGLRMIMVH +W + + GL + + + G M DE+TAEFLWQAKLAK
Sbjct: 137 VQVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNME-QPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLV-MNMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAI---TKWGPLAKLCD------GLPIEEGWFKETGSGKKEMEDEETAEFLWQAKLAK 371
BLAST of mRNA_H-paniculata_contig16486.3695.1 vs. uniprot
Match: A0A6H5JWX3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWX3_9PHAE) HSP 1 Score: 279 bits (714), Expect = 9.560e-82 Identity = 148/230 (64.35%), Postives = 173/230 (75.22%), Query Frame = 3
Query: 3552 VNNHWWDHNTLLETTGEGRGKVTKNDDGRRRITQDQEDQLYKFINDEHKAGRQVFRRTVEEWMMDHCNPDKEVSNRAVGGLLQRLGYRCRRGRIKTPPLDAKRLARIRLFLVEMNIAKRAEDAGLAVLVYMDESFVHQAHGSTYSYFPTDQNGVVEDEMDRTMGKGLRMIMVHESRSGARWLRVVPIISFKSKRVGLSVRKT-IGESKGGKDFNMIDEKTAEFLWQAKLA 4238
+NNHWWDH L TT GRGK K DDGRRR+T+ QEDQL +FINDEHKAGRQVFRRTV EWM CN + + SNR+ GGLL RLGY+ RRGRIKTPPL+A+RLARIR FLVEM++AKRAEDAGLAV+VYMDESFVHQAHGS YSYFP+D++GVV+D + RT GKGLRMIMVH +W + + GL + + E+ GK M DE+TAEFLWQ KLA
Sbjct: 5 INNHWWDHRQLYGTTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHSTCNME-QPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAI---TKWGPLAKLCD------GLPIEEGWFKETDSGKK-EMEDEETAEFLWQTKLA 223 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16486.3695.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16486.3695.1 >prot_H-paniculata_contig16486.3695.1 ID=prot_H-paniculata_contig16486.3695.1|Name=mRNA_H-paniculata_contig16486.3695.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=263bp MLLFALRKDGVSENQPVLQVASTFKIGHSKVSGVNNHWWDHNTLLETTGEback to top mRNA from alignment at H-paniculata_contig16486:1068..5859- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16486.3695.1 ID=mRNA_H-paniculata_contig16486.3695.1|Name=mRNA_H-paniculata_contig16486.3695.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4792bp|location=Sequence derived from alignment at H-paniculata_contig16486:1068..5859- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16486:1068..5859- >mRNA_H-paniculata_contig16486.3695.1 ID=mRNA_H-paniculata_contig16486.3695.1|Name=mRNA_H-paniculata_contig16486.3695.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1578bp|location=Sequence derived from alignment at H-paniculata_contig16486:1068..5859- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |