mRNA_H-paniculata_contig16429.3668.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16429.3668.1 vs. uniprot
Match: D7FPA6_ECTSI (Glutamine synthetase n=3 Tax=Ectocarpus TaxID=2879 RepID=D7FPA6_ECTSI) HSP 1 Score: 317 bits (812), Expect = 1.360e-105 Identity = 159/215 (73.95%), Postives = 168/215 (78.14%), Query Frame = 1
Query: 19 QGPYYCSIGFENAFGRHIMEAHYKACLFAGIEISGTNGEVMPGYLRMHLAHIPPLPAPDRSNESKLQVGPCVGIASGDELWLSRYLLYRVCEQFGVVCSLDPKPIPGDWNGAGCHTNYSTKEMREEGGYTKIVDAIEKLGEKHAEHIAAYGEVRH------HPTI----FSYGVANRGASIRIGRTVEEEGKGYFEDRRPSSNMDPYIVTGMIVK 633
QGPYYCSIG+ENAFGRHIMEAHYKACLFAG+ ISGTNGEVMPG + + QVGPC GIASGDELW+SRYLL RVCEQFGV+ SLDPKPIPGDWNGAGCHTNYSTK MREEGGY I+ AIEKLGEKH EHIAAYGE H T FSYGVANRGASIRIGR VE+E KGYFEDRRPSSNMDPY+VTGMIVK
Sbjct: 164 QGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTNGEVMPG-------------------QWEYQVGPCEGIASGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNERRLTGKHETASMDKFSYGVANRGASIRIGRDVEKEQKGYFEDRRPSSNMDPYVVTGMIVK 359
BLAST of mRNA_H-paniculata_contig16429.3668.1 vs. uniprot
Match: A0A835YJ88_9STRA (Glutamine synthetase n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ88_9STRA) HSP 1 Score: 302 bits (774), Expect = 8.130e-100 Identity = 148/215 (68.84%), Postives = 166/215 (77.21%), Query Frame = 1
Query: 19 QGPYYCSIGFENAFGRHIMEAHYKACLFAGIEISGTNGEVMPGYLRMHLAHIPPLPAPDRSNESKLQVGPCVGIASGDELWLSRYLLYRVCEQFGVVCSLDPKPIPGDWNGAGCHTNYSTKEMREEGGYTKIVDAIEKLGEKHAEHIAAYGE------VRHHPTI----FSYGVANRGASIRIGRTVEEEGKGYFEDRRPSSNMDPYIVTGMIVK 633
QGPYYC+IG ENAFGRHIMEAHYKACLFAG++ISGTNGEVMPG + + QVGPCVGI +GD+LW+SRYLL RVCE FGV+ SLDPKPIPGDWNGAGCHTNYST+ MR GGY KI++AIEKLG+KH +HI AYGE H T FSYGVANRGASIRIGR VEEEG GYFEDRRP+SNMDPY+VTGMI++
Sbjct: 164 QGPYYCAIGKENAFGRHIMEAHYKACLFAGVKISGTNGEVMPG-------------------QWEYQVGPCVGITAGDDLWVSRYLLQRVCELFGVIVSLDPKPIPGDWNGAGCHTNYSTEPMRNPGGYAKIIEAIEKLGKKHEQHIKAYGEGNERRLTGRHETASISQFSYGVANRGASIRIGRQVEEEGCGYFEDRRPASNMDPYVVTGMIIQ 359
BLAST of mRNA_H-paniculata_contig16429.3668.1 vs. uniprot
Match: A0A7S0P9X0_CAFRO (Glutamine synthetase n=3 Tax=Sar TaxID=2698737 RepID=A0A7S0P9X0_CAFRO) HSP 1 Score: 271 bits (694), Expect = 1.770e-87 Identity = 133/213 (62.44%), Postives = 150/213 (70.42%), Query Frame = 1
Query: 19 QGPYYCSIGFENAFGRHIMEAHYKACLFAGIEISGTNGEVMPGYLRMHLAHIPPLPAPDRSNESKLQVGPCVGIASGDELWLSRYLLYRVCEQFGVVCSLDPKPIPGDWNGAGCHTNYSTKEMREEGGYTKIVDAIEKLGEKHAEHIAAYGEVRH------HPTI----FSYGVANRGASIRIGRTVEEEGKGYFEDRRPSSNMDPYIVTGMI 627
QGPYYCS G ENAFGR I +AHY+ACLFAGI++SG N EVMPG + + QVGPC+GI SGD +WLSRY++ RVCE FGVVCS DPKPIPGDWNGAGCH NYSTK MRE GGY I++AIEKLG KH EH+A YG H T FSYGVANRGAS+RI RT E + GYFEDRRP+SNMDPY+VT I
Sbjct: 181 QGPYYCSAGAENAFGRAIADAHYRACLFAGIKVSGINAEVMPG-------------------QWEYQVGPCLGIESGDHMWLSRYIMQRVCEDFGVVCSFDPKPIPGDWNGAGCHVNYSTKPMREAGGYAAIIEAIEKLGAKHLEHMAVYGRGNERRLTGAHETAPIDKFSYGVANRGASVRIPRTTEADDCGYFEDRRPASNMDPYVVTAKI 374
BLAST of mRNA_H-paniculata_contig16429.3668.1 vs. uniprot
Match: A0A0P6IKA6_9CRUS (Glutamine synthetase 2 cytoplasmic n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P6IKA6_9CRUS) HSP 1 Score: 267 bits (682), Expect = 2.220e-87 Identity = 132/215 (61.40%), Postives = 151/215 (70.23%), Query Frame = 1
Query: 19 QGPYYCSIGFENAFGRHIMEAHYKACLFAGIEISGTNGEVMPGYLRMHLAHIPPLPAPDRSNESKLQVGPCVGIASGDELWLSRYLLYRVCEQFGVVCSLDPKPIPGDWNGAGCHTNYSTKEMREEGGYTKIVDAIEKLGEKHAEHIAAYGE------VRHHPTI----FSYGVANRGASIRIGRTVEEEGKGYFEDRRPSSNMDPYIVTGMIVK 633
QGPYYC G +AFGR I++AHY+ACLFAG+ ISG N EVMPG + + QVGPC GI SGD +W+SRY+L RVCE FGV+ S DPKPIPGDWNGAGCHTNYST+ MRE+GG I++AIEK+ KH HIAAYG+ H T FSYGVANRGASIRI R E EGKGYFEDRRP+SNMDPY+VTG IVK
Sbjct: 54 QGPYYCGAGAHSAFGRLIVDAHYRACLFAGVNISGVNAEVMPG-------------------QWEYQVGPCTGIESGDHMWISRYILLRVCEDFGVIVSFDPKPIPGDWNGAGCHTNYSTQAMREDGGMAVIIEAIEKMKLKHKVHIAAYGKGNERRLTGRHETASIEQFSYGVANRGASIRIPRQAEAEGKGYFEDRRPASNMDPYVVTGRIVK 249
BLAST of mRNA_H-paniculata_contig16429.3668.1 vs. uniprot
Match: D0NNT6_PHYIT (Glutamine synthetase n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NNT6_PHYIT) HSP 1 Score: 263 bits (673), Expect = 2.040e-86 Identity = 133/214 (62.15%), Postives = 148/214 (69.16%), Query Frame = 1
Query: 22 GPYYCSIGFENAFGRHIMEAHYKACLFAGIEISGTNGEVMPGYLRMHLAHIPPLPAPDRSNESKLQVGPCVGIASGDELWLSRYLLYRVCEQFGVVCSLDPKPIPGDWNGAGCHTNYSTKEMREEGGYTKIVDAIEKLGEKHAEHIAAYGE------VRHHPTI----FSYGVANRGASIRIGRTVEEEGKGYFEDRRPSSNMDPYIVTGMIVK 633
GPYYC G + FGR I++AHY+A L+AGI ISG N EVMPG + + QVGPC GI SGD LW+SRY+L RVCE FGV S DPKPIPGDWNGAGCHTNYSTK MREEGG KI++AIEK+ KH EHIAAYG H T FSYGVANRGASIRI R E EGKGYFEDRRP+SNMDPY+VTG I+K
Sbjct: 27 GPYYCGAGAHSVFGRIIVDAHYRASLYAGINISGINAEVMPG-------------------QWEYQVGPCTGIESGDHLWMSRYILLRVCEDFGVNVSWDPKPIPGDWNGAGCHTNYSTKAMREEGGMAKIIEAIEKMKLKHKEHIAAYGTGNERRLTGRHETASMDTFSYGVANRGASIRIPRVAEAEGKGYFEDRRPASNMDPYVVTGRIIK 221
BLAST of mRNA_H-paniculata_contig16429.3668.1 vs. uniprot
Match: A0A446QPA7_TRITD (Glutamine synthetase n=4 Tax=Pooideae TaxID=147368 RepID=A0A446QPA7_TRITD) HSP 1 Score: 263 bits (673), Expect = 2.250e-86 Identity = 131/215 (60.93%), Postives = 155/215 (72.09%), Query Frame = 1
Query: 19 QGPYYCSIGFENAFGRHIMEAHYKACLFAGIEISGTNGEVMPGYLRMHLAHIPPLPAPDRSNESKLQVGPCVGIASGDELWLSRYLLYRVCEQFGVVCSLDPKPIPGDWNGAGCHTNYSTKEMREEGGYTKIVDAIEKLGEKHAEHIAAYGE------VRHHPTI----FSYGVANRGASIRIGRTVEEEGKGYFEDRRPSSNMDPYIVTGMIVK 633
QGPYYC+ G + AFGR I++AHYKACL+AGI ISG NGEVMPG + + QVGP VGIA+ D+LW++RY+L R+ E GVV SLDPKPIPGDWNGAG HTNYSTK MRE GGY I AIEKLG++HA+HIAAYGE HH T F +GVA+RGASIR+GR E++GKGYFEDRRP+SNMDPY+VT MI +
Sbjct: 31 QGPYYCAAGADKAFGRDIVDAHYKACLYAGINISGINGEVMPG-------------------QWEFQVGPSVGIAASDQLWVARYILERITEVAGVVLSLDPKPIPGDWNGAGAHTNYSTKSMREAGGYGVIKTAIEKLGKRHAQHIAAYGEGNERRLTGHHETADINTFKWGVADRGASIRVGRDTEKDGKGYFEDRRPASNMDPYVVTSMIAE 226
BLAST of mRNA_H-paniculata_contig16429.3668.1 vs. uniprot
Match: A0A7S3XXT5_HETAK (Glutamine synthetase n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXT5_HETAK) HSP 1 Score: 268 bits (684), Expect = 5.250e-86 Identity = 135/215 (62.79%), Postives = 152/215 (70.70%), Query Frame = 1
Query: 19 QGPYYCSIGFENAFGRHIMEAHYKACLFAGIEISGTNGEVMPGYLRMHLAHIPPLPAPDRSNESKLQVGPCVGIASGDELWLSRYLLYRVCEQFGVVCSLDPKPIPGDWNGAGCHTNYSTKEMREEGGYTKIVDAIEKLGEKHAEHIAAYGEVRH------HPTI----FSYGVANRGASIRIGRTVEEEGKGYFEDRRPSSNMDPYIVTGMIVK 633
QGPYYC G ENA+GR I+EAHYKACL+AGI ISG N EVMPG + + QVGP VGI SGD +W+SRYLL RVCE FGV+ S DPKPIPGDWNGAGCHTN+ST+ MR GG+ I DA++KLGEKHAEHIAAYGE H T FSYGVANRG S RI RT E +G GYFEDRRP+SNMDPY+VTG IV+
Sbjct: 179 QGPYYCGNGTENAYGRPIVEAHYKACLYAGINISGINAEVMPG-------------------QWEYQVGPSVGIDSGDHMWVSRYLLTRVCEDFGVIVSYDPKPIPGDWNGAGCHTNFSTEPMRRPGGFAVIEDALKKLGEKHAEHIAAYGEGNERRLTGKHETASITQFSYGVANRGCSCRIPRTTEADGYGYFEDRRPASNMDPYVVTGKIVE 374
BLAST of mRNA_H-paniculata_contig16429.3668.1 vs. uniprot
Match: D0NNT7_PHYIT (Glutamine synthetase n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NNT7_PHYIT) HSP 1 Score: 265 bits (678), Expect = 1.000e-85 Identity = 134/215 (62.33%), Postives = 149/215 (69.30%), Query Frame = 1
Query: 19 QGPYYCSIGFENAFGRHIMEAHYKACLFAGIEISGTNGEVMPGYLRMHLAHIPPLPAPDRSNESKLQVGPCVGIASGDELWLSRYLLYRVCEQFGVVCSLDPKPIPGDWNGAGCHTNYSTKEMREEGGYTKIVDAIEKLGEKHAEHIAAYGE------VRHHPTI----FSYGVANRGASIRIGRTVEEEGKGYFEDRRPSSNMDPYIVTGMIVK 633
QGPYYC G + FGR I++AHY+A L+AGI ISG N EVMPG + + QVGPC GI SGD LW+SRY+L RVCE FGV S DPKPIPGDWNGAGCHTNYSTK MREEGG KI++AIEK+ KH EHIAAYG H T FSYGVANRGASIRI R E EGKGYFEDRRP+SNMDPY+VTG I+K
Sbjct: 129 QGPYYCGAGAHSVFGRIIVDAHYRASLYAGINISGINAEVMPG-------------------QWEYQVGPCTGIESGDHLWMSRYILLRVCEDFGVNVSWDPKPIPGDWNGAGCHTNYSTKAMREEGGMAKIIEAIEKMKLKHKEHIAAYGTGNERRLTGRHETASMDTFSYGVANRGASIRIPRVAEAEGKGYFEDRRPASNMDPYVVTGRIIK 324
BLAST of mRNA_H-paniculata_contig16429.3668.1 vs. uniprot
Match: A0A024G6F3_9STRA (Glutamine synthetase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G6F3_9STRA) HSP 1 Score: 266 bits (680), Expect = 1.120e-85 Identity = 133/215 (61.86%), Postives = 151/215 (70.23%), Query Frame = 1
Query: 19 QGPYYCSIGFENAFGRHIMEAHYKACLFAGIEISGTNGEVMPGYLRMHLAHIPPLPAPDRSNESKLQVGPCVGIASGDELWLSRYLLYRVCEQFGVVCSLDPKPIPGDWNGAGCHTNYSTKEMREEGGYTKIVDAIEKLGEKHAEHIAAYGE------VRHHPTI----FSYGVANRGASIRIGRTVEEEGKGYFEDRRPSSNMDPYIVTGMIVK 633
QGPYYC G +A+GR I +AHY+ACL+AGI ISG N EVMPG + + QVGPC GI SGD+LW+SRY+L RVCE FGV S DPKPIPGDWNGAGCHTNYSTKEMRE+GG KI++AIEKL KH HIAAYG+ H T FSYG+ANRGAS+RI R E EGKGYFEDRRPSSNMDPY+VT +VK
Sbjct: 155 QGPYYCGAGAHSAYGRMIADAHYRACLYAGINISGINAEVMPG-------------------QWEYQVGPCTGIESGDQLWISRYVLLRVCEDFGVNVSWDPKPIPGDWNGAGCHTNYSTKEMREDGGMGKIIEAIEKLKIKHHVHIAAYGQGNERRLTGRHETASIDSFSYGIANRGASVRIPRVAETEGKGYFEDRRPSSNMDPYLVTSRLVK 350
BLAST of mRNA_H-paniculata_contig16429.3668.1 vs. uniprot
Match: A0A833VBI2_9POAL (Glutamine synthetase n=3 Tax=Mesangiospermae TaxID=1437183 RepID=A0A833VBI2_9POAL) HSP 1 Score: 266 bits (679), Expect = 1.580e-85 Identity = 133/215 (61.86%), Postives = 154/215 (71.63%), Query Frame = 1
Query: 19 QGPYYCSIGFENAFGRHIMEAHYKACLFAGIEISGTNGEVMPGYLRMHLAHIPPLPAPDRSNESKLQVGPCVGIASGDELWLSRYLLYRVCEQFGVVCSLDPKPIPGDWNGAGCHTNYSTKEMREEGGYTKIVDAIEKLGEKHAEHIAAYGE------VRHHPTI----FSYGVANRGASIRIGRTVEEEGKGYFEDRRPSSNMDPYIVTGMIVK 633
QGPYYC++G E AFGR I++AHYKAC++AGI ISG NGEVMPG + + QVGP VGI++GDELW++R+LL R+ E GVV S DPKPIPGDWNGAG HTNYSTK MREEGGY I AIEKLG +H EHIAAYGE H T F +GVANRGASIR+GR E+EGKGYFEDRRP+SNMDPY+VT MI +
Sbjct: 154 QGPYYCAVGAEKAFGRDIVDAHYKACIYAGINISGINGEVMPG-------------------QWEFQVGPSVGISAGDELWIARFLLERITEIAGVVLSFDPKPIPGDWNGAGAHTNYSTKSMREEGGYEVIKKAIEKLGLRHKEHIAAYGEGNERRLTGRHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMITE 349 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16429.3668.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16429.3668.1 >prot_H-paniculata_contig16429.3668.1 ID=prot_H-paniculata_contig16429.3668.1|Name=mRNA_H-paniculata_contig16429.3668.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=211bp MRNVCHQGPYYCSIGFENAFGRHIMEAHYKACLFAGIEISGTNGEVMPGYback to top mRNA from alignment at H-paniculata_contig16429:795..2245+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16429.3668.1 ID=mRNA_H-paniculata_contig16429.3668.1|Name=mRNA_H-paniculata_contig16429.3668.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1451bp|location=Sequence derived from alignment at H-paniculata_contig16429:795..2245+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16429:795..2245+ >mRNA_H-paniculata_contig16429.3668.1 ID=mRNA_H-paniculata_contig16429.3668.1|Name=mRNA_H-paniculata_contig16429.3668.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1266bp|location=Sequence derived from alignment at H-paniculata_contig16429:795..2245+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |