mRNA_H-paniculata_contig16429.3668.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig16429.3668.1
Unique NamemRNA_H-paniculata_contig16429.3668.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig16429.3668.1 vs. uniprot
Match: D7FPA6_ECTSI (Glutamine synthetase n=3 Tax=Ectocarpus TaxID=2879 RepID=D7FPA6_ECTSI)

HSP 1 Score: 317 bits (812), Expect = 1.360e-105
Identity = 159/215 (73.95%), Postives = 168/215 (78.14%), Query Frame = 1
Query:   19 QGPYYCSIGFENAFGRHIMEAHYKACLFAGIEISGTNGEVMPGYLRMHLAHIPPLPAPDRSNESKLQVGPCVGIASGDELWLSRYLLYRVCEQFGVVCSLDPKPIPGDWNGAGCHTNYSTKEMREEGGYTKIVDAIEKLGEKHAEHIAAYGEVRH------HPTI----FSYGVANRGASIRIGRTVEEEGKGYFEDRRPSSNMDPYIVTGMIVK 633
            QGPYYCSIG+ENAFGRHIMEAHYKACLFAG+ ISGTNGEVMPG                   + + QVGPC GIASGDELW+SRYLL RVCEQFGV+ SLDPKPIPGDWNGAGCHTNYSTK MREEGGY  I+ AIEKLGEKH EHIAAYGE         H T     FSYGVANRGASIRIGR VE+E KGYFEDRRPSSNMDPY+VTGMIVK
Sbjct:  164 QGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTNGEVMPG-------------------QWEYQVGPCEGIASGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNERRLTGKHETASMDKFSYGVANRGASIRIGRDVEKEQKGYFEDRRPSSNMDPYVVTGMIVK 359          
BLAST of mRNA_H-paniculata_contig16429.3668.1 vs. uniprot
Match: A0A835YJ88_9STRA (Glutamine synthetase n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ88_9STRA)

HSP 1 Score: 302 bits (774), Expect = 8.130e-100
Identity = 148/215 (68.84%), Postives = 166/215 (77.21%), Query Frame = 1
Query:   19 QGPYYCSIGFENAFGRHIMEAHYKACLFAGIEISGTNGEVMPGYLRMHLAHIPPLPAPDRSNESKLQVGPCVGIASGDELWLSRYLLYRVCEQFGVVCSLDPKPIPGDWNGAGCHTNYSTKEMREEGGYTKIVDAIEKLGEKHAEHIAAYGE------VRHHPTI----FSYGVANRGASIRIGRTVEEEGKGYFEDRRPSSNMDPYIVTGMIVK 633
            QGPYYC+IG ENAFGRHIMEAHYKACLFAG++ISGTNGEVMPG                   + + QVGPCVGI +GD+LW+SRYLL RVCE FGV+ SLDPKPIPGDWNGAGCHTNYST+ MR  GGY KI++AIEKLG+KH +HI AYGE         H T     FSYGVANRGASIRIGR VEEEG GYFEDRRP+SNMDPY+VTGMI++
Sbjct:  164 QGPYYCAIGKENAFGRHIMEAHYKACLFAGVKISGTNGEVMPG-------------------QWEYQVGPCVGITAGDDLWVSRYLLQRVCELFGVIVSLDPKPIPGDWNGAGCHTNYSTEPMRNPGGYAKIIEAIEKLGKKHEQHIKAYGEGNERRLTGRHETASISQFSYGVANRGASIRIGRQVEEEGCGYFEDRRPASNMDPYVVTGMIIQ 359          
BLAST of mRNA_H-paniculata_contig16429.3668.1 vs. uniprot
Match: A0A7S0P9X0_CAFRO (Glutamine synthetase n=3 Tax=Sar TaxID=2698737 RepID=A0A7S0P9X0_CAFRO)

HSP 1 Score: 271 bits (694), Expect = 1.770e-87
Identity = 133/213 (62.44%), Postives = 150/213 (70.42%), Query Frame = 1
Query:   19 QGPYYCSIGFENAFGRHIMEAHYKACLFAGIEISGTNGEVMPGYLRMHLAHIPPLPAPDRSNESKLQVGPCVGIASGDELWLSRYLLYRVCEQFGVVCSLDPKPIPGDWNGAGCHTNYSTKEMREEGGYTKIVDAIEKLGEKHAEHIAAYGEVRH------HPTI----FSYGVANRGASIRIGRTVEEEGKGYFEDRRPSSNMDPYIVTGMI 627
            QGPYYCS G ENAFGR I +AHY+ACLFAGI++SG N EVMPG                   + + QVGPC+GI SGD +WLSRY++ RVCE FGVVCS DPKPIPGDWNGAGCH NYSTK MRE GGY  I++AIEKLG KH EH+A YG          H T     FSYGVANRGAS+RI RT E +  GYFEDRRP+SNMDPY+VT  I
Sbjct:  181 QGPYYCSAGAENAFGRAIADAHYRACLFAGIKVSGINAEVMPG-------------------QWEYQVGPCLGIESGDHMWLSRYIMQRVCEDFGVVCSFDPKPIPGDWNGAGCHVNYSTKPMREAGGYAAIIEAIEKLGAKHLEHMAVYGRGNERRLTGAHETAPIDKFSYGVANRGASVRIPRTTEADDCGYFEDRRPASNMDPYVVTAKI 374          
BLAST of mRNA_H-paniculata_contig16429.3668.1 vs. uniprot
Match: A0A0P6IKA6_9CRUS (Glutamine synthetase 2 cytoplasmic n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P6IKA6_9CRUS)

HSP 1 Score: 267 bits (682), Expect = 2.220e-87
Identity = 132/215 (61.40%), Postives = 151/215 (70.23%), Query Frame = 1
Query:   19 QGPYYCSIGFENAFGRHIMEAHYKACLFAGIEISGTNGEVMPGYLRMHLAHIPPLPAPDRSNESKLQVGPCVGIASGDELWLSRYLLYRVCEQFGVVCSLDPKPIPGDWNGAGCHTNYSTKEMREEGGYTKIVDAIEKLGEKHAEHIAAYGE------VRHHPTI----FSYGVANRGASIRIGRTVEEEGKGYFEDRRPSSNMDPYIVTGMIVK 633
            QGPYYC  G  +AFGR I++AHY+ACLFAG+ ISG N EVMPG                   + + QVGPC GI SGD +W+SRY+L RVCE FGV+ S DPKPIPGDWNGAGCHTNYST+ MRE+GG   I++AIEK+  KH  HIAAYG+         H T     FSYGVANRGASIRI R  E EGKGYFEDRRP+SNMDPY+VTG IVK
Sbjct:   54 QGPYYCGAGAHSAFGRLIVDAHYRACLFAGVNISGVNAEVMPG-------------------QWEYQVGPCTGIESGDHMWISRYILLRVCEDFGVIVSFDPKPIPGDWNGAGCHTNYSTQAMREDGGMAVIIEAIEKMKLKHKVHIAAYGKGNERRLTGRHETASIEQFSYGVANRGASIRIPRQAEAEGKGYFEDRRPASNMDPYVVTGRIVK 249          
BLAST of mRNA_H-paniculata_contig16429.3668.1 vs. uniprot
Match: D0NNT6_PHYIT (Glutamine synthetase n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NNT6_PHYIT)

HSP 1 Score: 263 bits (673), Expect = 2.040e-86
Identity = 133/214 (62.15%), Postives = 148/214 (69.16%), Query Frame = 1
Query:   22 GPYYCSIGFENAFGRHIMEAHYKACLFAGIEISGTNGEVMPGYLRMHLAHIPPLPAPDRSNESKLQVGPCVGIASGDELWLSRYLLYRVCEQFGVVCSLDPKPIPGDWNGAGCHTNYSTKEMREEGGYTKIVDAIEKLGEKHAEHIAAYGE------VRHHPTI----FSYGVANRGASIRIGRTVEEEGKGYFEDRRPSSNMDPYIVTGMIVK 633
            GPYYC  G  + FGR I++AHY+A L+AGI ISG N EVMPG                   + + QVGPC GI SGD LW+SRY+L RVCE FGV  S DPKPIPGDWNGAGCHTNYSTK MREEGG  KI++AIEK+  KH EHIAAYG          H T     FSYGVANRGASIRI R  E EGKGYFEDRRP+SNMDPY+VTG I+K
Sbjct:   27 GPYYCGAGAHSVFGRIIVDAHYRASLYAGINISGINAEVMPG-------------------QWEYQVGPCTGIESGDHLWMSRYILLRVCEDFGVNVSWDPKPIPGDWNGAGCHTNYSTKAMREEGGMAKIIEAIEKMKLKHKEHIAAYGTGNERRLTGRHETASMDTFSYGVANRGASIRIPRVAEAEGKGYFEDRRPASNMDPYVVTGRIIK 221          
BLAST of mRNA_H-paniculata_contig16429.3668.1 vs. uniprot
Match: A0A446QPA7_TRITD (Glutamine synthetase n=4 Tax=Pooideae TaxID=147368 RepID=A0A446QPA7_TRITD)

HSP 1 Score: 263 bits (673), Expect = 2.250e-86
Identity = 131/215 (60.93%), Postives = 155/215 (72.09%), Query Frame = 1
Query:   19 QGPYYCSIGFENAFGRHIMEAHYKACLFAGIEISGTNGEVMPGYLRMHLAHIPPLPAPDRSNESKLQVGPCVGIASGDELWLSRYLLYRVCEQFGVVCSLDPKPIPGDWNGAGCHTNYSTKEMREEGGYTKIVDAIEKLGEKHAEHIAAYGE------VRHHPTI----FSYGVANRGASIRIGRTVEEEGKGYFEDRRPSSNMDPYIVTGMIVK 633
            QGPYYC+ G + AFGR I++AHYKACL+AGI ISG NGEVMPG                   + + QVGP VGIA+ D+LW++RY+L R+ E  GVV SLDPKPIPGDWNGAG HTNYSTK MRE GGY  I  AIEKLG++HA+HIAAYGE        HH T     F +GVA+RGASIR+GR  E++GKGYFEDRRP+SNMDPY+VT MI +
Sbjct:   31 QGPYYCAAGADKAFGRDIVDAHYKACLYAGINISGINGEVMPG-------------------QWEFQVGPSVGIAASDQLWVARYILERITEVAGVVLSLDPKPIPGDWNGAGAHTNYSTKSMREAGGYGVIKTAIEKLGKRHAQHIAAYGEGNERRLTGHHETADINTFKWGVADRGASIRVGRDTEKDGKGYFEDRRPASNMDPYVVTSMIAE 226          
BLAST of mRNA_H-paniculata_contig16429.3668.1 vs. uniprot
Match: A0A7S3XXT5_HETAK (Glutamine synthetase n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXT5_HETAK)

HSP 1 Score: 268 bits (684), Expect = 5.250e-86
Identity = 135/215 (62.79%), Postives = 152/215 (70.70%), Query Frame = 1
Query:   19 QGPYYCSIGFENAFGRHIMEAHYKACLFAGIEISGTNGEVMPGYLRMHLAHIPPLPAPDRSNESKLQVGPCVGIASGDELWLSRYLLYRVCEQFGVVCSLDPKPIPGDWNGAGCHTNYSTKEMREEGGYTKIVDAIEKLGEKHAEHIAAYGEVRH------HPTI----FSYGVANRGASIRIGRTVEEEGKGYFEDRRPSSNMDPYIVTGMIVK 633
            QGPYYC  G ENA+GR I+EAHYKACL+AGI ISG N EVMPG                   + + QVGP VGI SGD +W+SRYLL RVCE FGV+ S DPKPIPGDWNGAGCHTN+ST+ MR  GG+  I DA++KLGEKHAEHIAAYGE         H T     FSYGVANRG S RI RT E +G GYFEDRRP+SNMDPY+VTG IV+
Sbjct:  179 QGPYYCGNGTENAYGRPIVEAHYKACLYAGINISGINAEVMPG-------------------QWEYQVGPSVGIDSGDHMWVSRYLLTRVCEDFGVIVSYDPKPIPGDWNGAGCHTNFSTEPMRRPGGFAVIEDALKKLGEKHAEHIAAYGEGNERRLTGKHETASITQFSYGVANRGCSCRIPRTTEADGYGYFEDRRPASNMDPYVVTGKIVE 374          
BLAST of mRNA_H-paniculata_contig16429.3668.1 vs. uniprot
Match: D0NNT7_PHYIT (Glutamine synthetase n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NNT7_PHYIT)

HSP 1 Score: 265 bits (678), Expect = 1.000e-85
Identity = 134/215 (62.33%), Postives = 149/215 (69.30%), Query Frame = 1
Query:   19 QGPYYCSIGFENAFGRHIMEAHYKACLFAGIEISGTNGEVMPGYLRMHLAHIPPLPAPDRSNESKLQVGPCVGIASGDELWLSRYLLYRVCEQFGVVCSLDPKPIPGDWNGAGCHTNYSTKEMREEGGYTKIVDAIEKLGEKHAEHIAAYGE------VRHHPTI----FSYGVANRGASIRIGRTVEEEGKGYFEDRRPSSNMDPYIVTGMIVK 633
            QGPYYC  G  + FGR I++AHY+A L+AGI ISG N EVMPG                   + + QVGPC GI SGD LW+SRY+L RVCE FGV  S DPKPIPGDWNGAGCHTNYSTK MREEGG  KI++AIEK+  KH EHIAAYG          H T     FSYGVANRGASIRI R  E EGKGYFEDRRP+SNMDPY+VTG I+K
Sbjct:  129 QGPYYCGAGAHSVFGRIIVDAHYRASLYAGINISGINAEVMPG-------------------QWEYQVGPCTGIESGDHLWMSRYILLRVCEDFGVNVSWDPKPIPGDWNGAGCHTNYSTKAMREEGGMAKIIEAIEKMKLKHKEHIAAYGTGNERRLTGRHETASMDTFSYGVANRGASIRIPRVAEAEGKGYFEDRRPASNMDPYVVTGRIIK 324          
BLAST of mRNA_H-paniculata_contig16429.3668.1 vs. uniprot
Match: A0A024G6F3_9STRA (Glutamine synthetase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G6F3_9STRA)

HSP 1 Score: 266 bits (680), Expect = 1.120e-85
Identity = 133/215 (61.86%), Postives = 151/215 (70.23%), Query Frame = 1
Query:   19 QGPYYCSIGFENAFGRHIMEAHYKACLFAGIEISGTNGEVMPGYLRMHLAHIPPLPAPDRSNESKLQVGPCVGIASGDELWLSRYLLYRVCEQFGVVCSLDPKPIPGDWNGAGCHTNYSTKEMREEGGYTKIVDAIEKLGEKHAEHIAAYGE------VRHHPTI----FSYGVANRGASIRIGRTVEEEGKGYFEDRRPSSNMDPYIVTGMIVK 633
            QGPYYC  G  +A+GR I +AHY+ACL+AGI ISG N EVMPG                   + + QVGPC GI SGD+LW+SRY+L RVCE FGV  S DPKPIPGDWNGAGCHTNYSTKEMRE+GG  KI++AIEKL  KH  HIAAYG+         H T     FSYG+ANRGAS+RI R  E EGKGYFEDRRPSSNMDPY+VT  +VK
Sbjct:  155 QGPYYCGAGAHSAYGRMIADAHYRACLYAGINISGINAEVMPG-------------------QWEYQVGPCTGIESGDQLWISRYVLLRVCEDFGVNVSWDPKPIPGDWNGAGCHTNYSTKEMREDGGMGKIIEAIEKLKIKHHVHIAAYGQGNERRLTGRHETASIDSFSYGIANRGASVRIPRVAETEGKGYFEDRRPSSNMDPYLVTSRLVK 350          
BLAST of mRNA_H-paniculata_contig16429.3668.1 vs. uniprot
Match: A0A833VBI2_9POAL (Glutamine synthetase n=3 Tax=Mesangiospermae TaxID=1437183 RepID=A0A833VBI2_9POAL)

HSP 1 Score: 266 bits (679), Expect = 1.580e-85
Identity = 133/215 (61.86%), Postives = 154/215 (71.63%), Query Frame = 1
Query:   19 QGPYYCSIGFENAFGRHIMEAHYKACLFAGIEISGTNGEVMPGYLRMHLAHIPPLPAPDRSNESKLQVGPCVGIASGDELWLSRYLLYRVCEQFGVVCSLDPKPIPGDWNGAGCHTNYSTKEMREEGGYTKIVDAIEKLGEKHAEHIAAYGE------VRHHPTI----FSYGVANRGASIRIGRTVEEEGKGYFEDRRPSSNMDPYIVTGMIVK 633
            QGPYYC++G E AFGR I++AHYKAC++AGI ISG NGEVMPG                   + + QVGP VGI++GDELW++R+LL R+ E  GVV S DPKPIPGDWNGAG HTNYSTK MREEGGY  I  AIEKLG +H EHIAAYGE         H T     F +GVANRGASIR+GR  E+EGKGYFEDRRP+SNMDPY+VT MI +
Sbjct:  154 QGPYYCAVGAEKAFGRDIVDAHYKACIYAGINISGINGEVMPG-------------------QWEFQVGPSVGISAGDELWIARFLLERITEIAGVVLSFDPKPIPGDWNGAGAHTNYSTKSMREEGGYEVIKKAIEKLGLRHKEHIAAYGEGNERRLTGRHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMITE 349          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16429.3668.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPA6_ECTSI1.360e-10573.95Glutamine synthetase n=3 Tax=Ectocarpus TaxID=2879... [more]
A0A835YJ88_9STRA8.130e-10068.84Glutamine synthetase n=3 Tax=Tribonema minus TaxID... [more]
A0A7S0P9X0_CAFRO1.770e-8762.44Glutamine synthetase n=3 Tax=Sar TaxID=2698737 Rep... [more]
A0A0P6IKA6_9CRUS2.220e-8761.40Glutamine synthetase 2 cytoplasmic n=1 Tax=Daphnia... [more]
D0NNT6_PHYIT2.040e-8662.15Glutamine synthetase n=1 Tax=Phytophthora infestan... [more]
A0A446QPA7_TRITD2.250e-8660.93Glutamine synthetase n=4 Tax=Pooideae TaxID=147368... [more]
A0A7S3XXT5_HETAK5.250e-8662.79Glutamine synthetase n=3 Tax=Heterosigma akashiwo ... [more]
D0NNT7_PHYIT1.000e-8562.33Glutamine synthetase n=1 Tax=Phytophthora infestan... [more]
A0A024G6F3_9STRA1.120e-8561.86Glutamine synthetase n=1 Tax=Albugo candida TaxID=... [more]
A0A833VBI2_9POAL1.580e-8561.86Glutamine synthetase n=3 Tax=Mesangiospermae TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16429contigH-paniculata_contig16429:795..2245 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score320.1
Seed ortholog evalue7.8e-85
Seed eggNOG ortholog2880.D7FPA6
KEGG rclassRC00010,RC02798
KEGG koko:K01915
KEGG ReactionR00253
KEGG Pathwayko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727
Hectar predicted targeting categoryother localisation
EggNOG free text desc.glutamine biosynthetic process
EggNOG OGsCOG0174@1,KOG0683@2759
Ec32 ortholog descriptionGlutamate ammonia ligase
Ec32 orthologEc-15_004110.1
EC6.3.1.2
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04147
Exons5
Model size633
Cds size633
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16429.3668.1prot_H-paniculata_contig16429.3668.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig16429 795..2245 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929311.046312-CDS-H-paniculata_contig16429:794..9431622929311.046312-CDS-H-paniculata_contig16429:794..943Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16429 795..943 +
1691480810.2025826-CDS-H-paniculata_contig16429:794..9431691480810.2025826-CDS-H-paniculata_contig16429:794..943Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16429 795..943 +
1622929311.056198-CDS-H-paniculata_contig16429:1051..12981622929311.056198-CDS-H-paniculata_contig16429:1051..1298Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16429 1052..1298 +
1691480810.2186074-CDS-H-paniculata_contig16429:1051..12981691480810.2186074-CDS-H-paniculata_contig16429:1051..1298Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16429 1052..1298 +
1622929311.0690348-CDS-H-paniculata_contig16429:1746..18321622929311.0690348-CDS-H-paniculata_contig16429:1746..1832Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16429 1747..1832 +
1691480810.2266192-CDS-H-paniculata_contig16429:1746..18321691480810.2266192-CDS-H-paniculata_contig16429:1746..1832Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16429 1747..1832 +
1622929311.0816581-CDS-H-paniculata_contig16429:1995..20081622929311.0816581-CDS-H-paniculata_contig16429:1995..2008Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16429 1996..2008 +
1691480810.2369905-CDS-H-paniculata_contig16429:1995..20081691480810.2369905-CDS-H-paniculata_contig16429:1995..2008Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16429 1996..2008 +
1622929311.0932748-CDS-H-paniculata_contig16429:2107..22451622929311.0932748-CDS-H-paniculata_contig16429:2107..2245Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16429 2108..2245 +
1691480810.2445915-CDS-H-paniculata_contig16429:2107..22451691480810.2445915-CDS-H-paniculata_contig16429:2107..2245Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16429 2108..2245 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig16429.3668.1

>prot_H-paniculata_contig16429.3668.1 ID=prot_H-paniculata_contig16429.3668.1|Name=mRNA_H-paniculata_contig16429.3668.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=211bp
MRNVCHQGPYYCSIGFENAFGRHIMEAHYKACLFAGIEISGTNGEVMPGY
LRMHLAHIPPLPAPDRSNESKLQVGPCVGIASGDELWLSRYLLYRVCEQF
GVVCSLDPKPIPGDWNGAGCHTNYSTKEMREEGGYTKIVDAIEKLGEKHA
EHIAAYGEVRHHPTIFSYGVANRGASIRIGRTVEEEGKGYFEDRRPSSNM
DPYIVTGMIVK
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mRNA from alignment at H-paniculata_contig16429:795..2245+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig16429.3668.1 ID=mRNA_H-paniculata_contig16429.3668.1|Name=mRNA_H-paniculata_contig16429.3668.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1451bp|location=Sequence derived from alignment at H-paniculata_contig16429:795..2245+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGCAACGTTTGTCATCAGGGACCGTACTACTGCTCCATCGGGTTCGA GAACGCCTTCGGCCGCCACATCATGGAAGCGCACTACAAGGCATGCTTGT TCGCCGGTATCGAAATCTCTGGCACCAACGGGGAAGTGATGCCTGGCTAG TGGGAGTATCAGGCGAGGAGAGCCAATAAAAACTACTTCTTTCAATATGG AAACCATGATGGATAGAAGTATGTAGTATGTGCAGGAGCCCCACTGCGGT CCCAAAGCTTGCGCATGCACCTCGCTCATATCCCCCCTCTTCCCGCACCC GATCGTTCAAACGAATCAAAACTGCAGGTCGGCCCGTGCGTGGGCATCGC ATCAGGAGATGAGTTGTGGCTCTCTCGCTACTTGCTCTACCGTGTGTGCG AGCAATTCGGTGTTGTTTGCTCGCTAGACCCCAAGCCCATCCCAGGAGAT TGGAACGGGGCTGGGTGCCACACGAACTACTCCACCAAGGAGATGCGCGA GGAGGTGAATATCGAGGTTCACAGAGTCAAGTACCCAAGGCCAACACTAG GTGGTTCCTATGTTTTCTGAATGTGTGTCTGTTCATGTTCAGACATCACC TCTCGGTGGGGCTTGTAGCATGGCACTTGTGAACTGAGATGACCTGGCCC ACTCTCAGCTGCAGTTAATCATCTTTGAAATTTACGACGTTGTCTCAATT TCTCCACCACATCCAATTTGACTTCAATTCGAGCGTGCGAGTGCTGGGTG GACGCTGCGATCGCCGTCTTCTACTGCTAACCCGATATTCAGGAGATCAG CAGGTACATAACTTTTAAGCATTTTGCTGAATAGAACGAAAACATTTCTC ATGACTCGGAAAATTTGACGCTCACTTGACGAAAGCTTCTTGTTTCAACG CGCACAGCAACGCTTGTGCTTACTTTGTCCCTCGCCCTGGAATGTTTTTT AGGGTGGCTATACGAAGATCGTCGACGCTATCGAGAAGCTAGGCGAGAAG CATGCCGAGCACATTGCTGCCTACGGAGAGGTAAGGCAGTTTTCCTACTT CTACTCTTGGTGTACAAAGCGGTAATACCTGCCTCCGTTTGCTTATAGTC ATCATCATTTAGTATCCAACACAACTTACCTGCGGATGAATAATACCAAG GAGTTGTTAGTTCACAAAACGGGTTATAGCCAGCTTCGGACAAGTGAACA GTCACCCAACAATAGTATAGTCTGACCCAATCTTCACGCATTTCCGCTTC TATTCTGAGAAGGGCAACGAACGCCGCCTTACGGGGCGCCACGAAACTGC GTCGATGGAAAAGTTTTCGTATGGCGTGGCCAACCGCGGCGCATCGATCC GCATCGGCCGCACTGTCGAGGAGGAGGGCAAGGGTTACTTTGAGGACCGC AGGCCTTCGTCTAACATGGACCCTTACATCGTTACCGGCATGATCGTCAA G
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Coding sequence (CDS) from alignment at H-paniculata_contig16429:795..2245+

>mRNA_H-paniculata_contig16429.3668.1 ID=mRNA_H-paniculata_contig16429.3668.1|Name=mRNA_H-paniculata_contig16429.3668.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1266bp|location=Sequence derived from alignment at H-paniculata_contig16429:795..2245+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGCAACGTTTGTCATCAGGGACCGTACTACTGCTCCATCGGGTTCGA
GAACGCCTTCGGCCGCCACATCATGGAAGCGCACTACAAGGCATGCTTGT
TCGCCGGTATCGAAATCTCTGGCACCAACGGGGAAGTGATGCCTGGCTAA
TGCGCAACGTTTGTCATCAGGGACCGTACTACTGCTCCATCGGGTTCGAG
AACGCCTTCGGCCGCCACATCATGGAAGCGCACTACAAGGCATGCTTGTT
CGCCGGTATCGAAATCTCTGGCACCAACGGGGAAGTGATGCCTGGCTACT
TGCGCATGCACCTCGCTCATATCCCCCCTCTTCCCGCACCCGATCGTTCA
AACGAATCAAAACTGCAGGTCGGCCCGTGCGTGGGCATCGCATCAGGAGA
TGAGTTGTGGCTCTCTCGCTACTTGCTCTACCGTGTGTGCGAGCAATTCG
GTGTTGTTTGCTCGCTAGACCCCAAGCCCATCCCAGGAGATTGGAACGGG
GCTGGGTGCCACACGAACTACTCCACCAAGGAGATGCGCGAGGAGCTTGC
GCATGCACCTCGCTCATATCCCCCCTCTTCCCGCACCCGATCGTTCAAAC
GAATCAAAACTGCAGGTCGGCCCGTGCGTGGGCATCGCATCAGGAGATGA
GTTGTGGCTCTCTCGCTACTTGCTCTACCGTGTGTGCGAGCAATTCGGTG
TTGTTTGCTCGCTAGACCCCAAGCCCATCCCAGGAGATTGGAACGGGGCT
GGGTGCCACACGAACTACTCCACCAAGGAGATGCGCGAGGAGGGTGGCTA
TACGAAGATCGTCGACGCTATCGAGAAGCTAGGCGAGAAGCATGCCGAGC
ACATTGCTGCCTACGGAGAGGTAAGGCAGGTGGCTATACGAAGATCGTCG
ACGCTATCGAGAAGCTAGGCGAGAAGCATGCCGAGCACATTGCTGCCTAC
GGAGAGGTAAGGCATCACCCAACAATATCACCCAACAATATTTTCGTATG
GCGTGGCCAACCGCGGCGCATCGATCCGCATCGGCCGCACTGTCGAGGAG
GAGGGCAAGGGTTACTTTGAGGACCGCAGGCCTTCGTCTAACATGGACCC
TTACATCGTTACCGGCATGATCGTCAAGTTTTCGTATGGCGTGGCCAACC
GCGGCGCATCGATCCGCATCGGCCGCACTGTCGAGGAGGAGGGCAAGGGT
TACTTTGAGGACCGCAGGCCTTCGTCTAACATGGACCCTTACATCGTTAC
CGGCATGATCGTCAAG
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