mRNA_H-paniculata_contig16379.3646.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig16379.3646.1
Unique NamemRNA_H-paniculata_contig16379.3646.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig16379.3646.1 vs. uniprot
Match: A0A2I6U1M4_SACJA (Tic20-like protein n=15 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1M4_SACJA)

HSP 1 Score: 415 bits (1066), Expect = 9.740e-137
Identity = 249/397 (62.72%), Postives = 291/397 (73.30%), Query Frame = 1
Query:   10 NAVPLLALLLASGADAFVTPVNNRGASLAPVCQRSVMPITSLARTWSSTAPRRCTSSVAAVCMSAPDT-TETASETVEQSVARLRQTAAVFREQAAQLEDK*EEDRRAGADRSFNSFDSNKDGEVDVQELQAGLAGPLRRSFTKQLTARMGLRPSGEEVDARIAQLPGGSLFPDDLARKLIAVYDRNSDGVFQRSEFAPAEELCARLKNMFREQQEEERQARVAERERQAAEKITAQGGSGVVATTE-GGINDGAPTSADKALSAFSYLLPLADGLACGGHLFASHPEQMAVLQPLVAVLFALRSLPFATLVGFFGLSTLSNNPQVNKLVRFNMKQAINFDIILIVPGILGALVSASLGHDACKLAPLTEAASDV-FVALLVAIAYSVGPQWSGSSP 1191
            + +PLLALLL S   AFVTP   RGAS +    +     T++AR     A RR     ++ C+S   T T +  E  ++  ARLR+TAA FR QAA+LEDK  ++R+AGA+RSFNSFDSN+DG VD+ EL+AGL GPLRRSF KQLTARMG +P  EE+DARIA LPGGSLFPDDLARKLI  YD+N DG+ QRSEFAP EEL  RL+NMFR+QQE  RQARV ER+RQ  +K+ A+ G+G  A    GG+NDG  T+ADKALSA  YLLPL DG++  GHLF + PEQ A  QPL AVL ALRSLPFATLVGFF LS LS NPQVNKLVRFNM+QAIN DI LIVPG+LGAL S SLG DA KL PL EA SDV FVA+L A+AYSV    +GS P
Sbjct:    7 SIIPLLALLLGS-TTAFVTP-TGRGASWSLPSVQQSSTFTAVARQ----AIRR-----SSPCLSMMATGTSSEVEVAQEKAARLRETAAAFRAQAAELEDKRTQERQAGAERSFNSFDSNQDGAVDIVELKAGLEGPLRRSFVKQLTARMGRKPDREEIDARIAALPGGSLFPDDLARKLIDTYDQNGDGLLQRSEFAPTEELRTRLENMFRDQQETARQARVEERQRQMEDKLAAEVGTGAGAVVPAGGVNDGPATAADKALSALPYLLPLVDGISFAGHLFGAFPEQTAWAQPLAAVLLALRSLPFATLVGFFSLSALSGNPQVNKLVRFNMQQAINLDIALIVPGVLGALASVSLGQDAYKLVPLAEAGSDVVFVAMLAAVAYSVVTSSTGSFP 392          
BLAST of mRNA_H-paniculata_contig16379.3646.1 vs. uniprot
Match: D8LS19_ECTSI (EF-hand domain-containing protein n=7 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS19_ECTSI)

HSP 1 Score: 365 bits (936), Expect = 3.210e-117
Identity = 221/393 (56.23%), Postives = 271/393 (68.96%), Query Frame = 1
Query:   16 VPLLALLLASGADAFVTPVNNRGASLAPVCQRSVMPITSLARTWSSTAPRRCTSSVAAVCMSAPDTTETASETVEQSVARLRQTAAVFREQAAQLEDK*EEDRRAGADRSFNSFDSNKDGEVDVQELQAGLAGPLRRSFTKQLTARMGLRPSGEEVDARIAQLPGGSLFPDDLARKLIAVYDRNSDGVFQRSEFAPAEELCARLKNMFREQQEEERQARVAERERQAAEKITAQGGSGVVATTEGGINDGAPTSADKALSAFSYLLPLADGLACGGHLFASHPEQMAVLQPLVAVLFALRSLPFATLVGFFGLSTLSNNPQVNKLVRFNMKQAINFDIILIVPGILGALVSASLGHDACKLAPLTEAASDV-FVALLVAIAYSVGPQWSGSSP 1191
            VPL+ L + S   AFVTP   RGAS +    +  +  ++ A      A RR +++ A   +         SE  EQ  A+LR+TAA FR +AA+LE K   +RR  A RSFN+FDSNKDG VDV EL+AGL GPLRRSFTK L ARMG +PS EEVD RIA LPGG+LFPDDLA KLI  YD+N DG+ Q+SEFAP EEL  RL+N+F +Q+EEER AR+        +++    G+ VV  + G +NDG  T+ADKALSA  Y+LPLADG+    HLF + PEQ A  QPL AVL ALRS+PFATL+GFF LS  S+NPQ+NKLVRFNM+QAIN DI LI+PG++GA+  A LG DA KLAPL  A+SDV FVALL A+AYSVG   +GS P
Sbjct:    9 VPLVTLFVGS-TTAFVTP-TGRGASWSLANPQHAVRSSTSAVATRHNARRRSSATPATSSL------RMVSEVAEQRAAKLRETAAAFRAEAAELEQKQARERRENAQRSFNTFDSNKDGSVDVAELKAGLEGPLRRSFTKTLQARMGRKPSKEEVDDRIAGLPGGTLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXDRMRPDAGTVVV--SPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLIGFFSLSIWSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANASSDVVFVALLAAVAYSVGTSATGSFP 391          
BLAST of mRNA_H-paniculata_contig16379.3646.1 vs. uniprot
Match: D7FRG5_ECTSI (EF-hand domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG5_ECTSI)

HSP 1 Score: 363 bits (933), Expect = 5.720e-117
Identity = 224/400 (56.00%), Postives = 271/400 (67.75%), Query Frame = 1
Query:   10 NAVPLLALLLASGADAFVTPVNNRGASLAPVC-QRSVMPITSLARTWSSTAPRRCTSSVAAVCMSAPDTTETASETVEQSVARLRQTAAVFREQAAQLEDK*EEDRRAGADRSFNSFDSNKDGEVDVQELQAGLAGPLRRSFTKQLTARMGLRPSGEEVDARIAQLPGGSLFPDDLARKLIAVYDRNSDGVFQRSEFAPAEELCARLKNMFREQQEEERQARVAERERQAAEKITAQGGSGVVATTEGGINDGAPTSADKALSAFSYLLPLADGLACGGHLFASHPEQMAVLQPLVAVLFALRSLPFATLVGFFGLSTLSNNPQVNKLVRFNMKQAINFDIILIVPGILGALVSASLGHDACKLAPLTEAASDV-FVALLVAIAYSVGPQWSGSSPTSFR 1203
              +PLLAL L S   AFV P+  RGAS +    QR+V   TS A T  +T  R       +  M A  +    S+  EQ  A+LR+TAA FR +          +RR  A RSFN+FDSNKDG VD+ EL+AGL  PLRRSFTK L ARMG +PS EEVD RIA LPGG+LFPD+LA KLI  YD+N DG+ Q+SEFAP EEL  RL+N+  +Q+E+ER AR+ ER+RQ  +K+     +G V  + G +NDG  T+ADKALSA  YLLPL DG+    HLF + PEQ A  QPL AVL ALRSLPFATL+GFF LS  S+NP+VNKLVRFNM+QAIN DI LI+PG++GA+    LG DA KLAPL+ A SDV FVALL A+AYSVG   +G S TSFR
Sbjct:    7 TTIPLLALSLGS-TTAFVAPIG-RGASWSLANPQRAVRSSTSAAATRHNTLRR-------SSAMPATSSLRMVSKVAEQKAAKLRETAAAFRAEXXXXXXXXARERRENALRSFNTFDSNKDGSVDIAELKAGLESPLRRSFTKTLQARMGRKPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLLSQQREDERLARLEERQRQMDDKMRPD--TGAVVVSPGDVNDGPATTADKALSALPYLLPLVDGILFAAHLFGAFPEQTAWAQPLAAVLLALRSLPFATLIGFFSLSIGSSNPRVNKLVRFNMQQAINLDIALILPGVVGAITGGMLGADAVKLAPLSNAGSDVVFVALLAAVAYSVGTSATGRSRTSFR 395          
BLAST of mRNA_H-paniculata_contig16379.3646.1 vs. uniprot
Match: D8LS20_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS20_ECTSI)

HSP 1 Score: 314 bits (805), Expect = 7.740e-98
Identity = 191/347 (55.04%), Postives = 237/347 (68.30%), Query Frame = 1
Query:   16 VPLLALLLASGADAFVTPVNNRGASLAPVCQRSVMPITSLARTWSSTAPRRCTSSVAAVCMSAPDTTETASETVEQSVARLRQTAAVFREQAAQLEDK*EEDRRAGADRSFNSFDSNKDGEVDVQELQAGLAGPLRRSFTKQLTARMGLRPSGEEVDARIAQLPGGSLFPDDLARKLIAVYDRNSDGVFQRSEFAPAEELCARLKNMFREQQEEERQARVAERERQAAEKITAQGGSGVVATTEGGINDGAPTSADKALSAFSYLLPLADGLACGGHLFASHPEQMAVLQPLVAVLFALRSLPFATLVGFFGLSTLSNNPQVNKLVRFNMKQAINFDIILIVPGILG 1056
            VPL+ L + S   AFVTP   RGAS +    +  +  ++ A      A RR +++ A   +         SE  EQ  A+LR+TAA FR +AA+LE K   +RR  A RSFN+FDSNKDG VDV EL+AGL GPLRRSFTK L ARMG +PS EEVD RIA LPGG+LFPDDLA KLI  YD+N DG+ Q+SEFAP EEL  RL+N+F +Q+EEER AR+        +++    G+ VV  + G +NDG  T+ADKALSA  Y+LPLADG+    HLF +  EQ A  QPL AVL ALRS+PFATL+GFF LS  S+NPQ+NKLVRFNM+QAIN DI LI+PG++G
Sbjct:    9 VPLVTLFVGS-TTAFVTP-TGRGASWSLANPQHAVRSSTSAVATRHNARRRSSATPATSSL------RMVSEVAEQRAAKLRETAAAFRAEAAELEQKQARERRENAQRSFNTFDSNKDGSVDVAELKAGLEGPLRRSFTKTLQARMGRKPSKEEVDDRIAGLPGGTLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXDRMRPDAGTVVV--SPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFLEQTAWAQPLAAVLLALRSVPFATLIGFFSLSIGSSNPQINKLVRFNMQQAINLDIALILPGVVG 345          
BLAST of mRNA_H-paniculata_contig16379.3646.1 vs. uniprot
Match: A0A6H5JY95_9PHAE (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY95_9PHAE)

HSP 1 Score: 300 bits (768), Expect = 2.760e-92
Identity = 160/293 (54.61%), Postives = 221/293 (75.43%), Query Frame = 1
Query:  331 GADRSFNSFDSNKDGEVDVQELQAGLAGPLRRSFTKQLTARMGLRPSGEEVDARIAQLPGGSLFPDDLARKLIAVYDRNSDGVFQRSEFAPAEELCARLKNMFREQQEEERQARVAERERQAAEKITAQGGSGVVATTEGGINDGAPTSADKALSAFSYLLPLADGLACGGHLFASHPEQMAVLQPLVAVLFALRSLPFATLVGFFGLSTLSNNPQVNKLVRFNMKQAINFDIILIVPGILGALVSASLGHDACKLAPLTEAASDVF-VALLVAIAYSVGPQWSGSSPTSFRF 1206
            GADRSF +FDSNKDG V V EL+AGL GPL+++FTKQLTARMG +P+ EEV+A+I +LPG +LFPDDLA +LI +YD+N DGV Q+SEFAP EEL ARL+++FRE++EEE +AR AER+R+   K T +G   + +  +      + TS +KAL A  Y+LPL+DG+    H++++ P+QMA  +PLVA+L A+ +LPFATLV FFG+S LS+N  +NKL+RFNM QAINFDI LIVP + G L++ SLG DA K++P+T+ A+D+  V+L++A+AYS+    +G+ P    F
Sbjct:  101 GADRSFAAFDSNKDGAVGVAELKAGLEGPLKKTFTKQLTARMGRKPTPEEVEAKILELPGRALFPDDLAERLIKLYDQNGDGVLQQSEFAPTEELRARLESIFRERREEELEARQAERKREMDAKTTGKGKM-LSSVADSDREAASATSLEKALCALPYILPLSDGIVYAQHIYSTFPQQMAWSEPLVAILIAVNNLPFATLVAFFGMSILSSNQNINKLLRFNMLQAINFDIALIVPSVFGPLLTWSLGSDAYKISPVTDIATDILSVSLVLAVAYSIAASATGAIPNKIPF 392          
BLAST of mRNA_H-paniculata_contig16379.3646.1 vs. uniprot
Match: A0A6H5JBJ0_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ0_9PHAE)

HSP 1 Score: 248 bits (633), Expect = 1.250e-73
Identity = 150/284 (52.82%), Postives = 179/284 (63.03%), Query Frame = 1
Query:  346 FNSFDSNKDGEVDVQELQAGLAGPLRRSFTKQLTARMGLRPSGEEVDARIAQLPGGSLFPDDLARKLIAVYDRNSDGVFQRSEFAPAEELCARLKNMFREQQEEERQARVAERERQAAEKITAQGGSGVVATTEGGINDGAPTSADKALSAFSYLLPLADGLACGGHLFASHPEQMAVLQPLVAVLFALRSLPFATLVGFFGLSTLS-NNPQVNKLVRFNMKQAINFDIILIVPGILGALVSASLGHDACKLAPLTEAASDV-FVALLVAIAYSVGPQWSGSSP 1191
            FN+FDSNKDG VD+ EL+AGL  PLRR  TK L ARMG +PS EEVD RIA LPGG+LFPD+LA KLI  YD+N DG+ Q SEFAP EEL  RL+++F +Q+E+ER AR+ ER+R+  +K+    G+ V A                                                QPL AVL ALRS+PFATL+GFF LS     NPQVNKLVRFN +QAIN DI LI+PG++GA+  A LG DA KLAPL  A SDV FVALL A+AYSVG   +GS P
Sbjct:   47 FNTFDSNKDGSVDIAELKAGLESPLRRGLTKTLQARMGRKPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQLSEFAPTEELRTRLEDLFSQQREDERVARMEERQRRMDDKMRPDTGAVVTAWA----------------------------------------------QPLAAVLLALRSVPFATLIGFFSLSVHRLRNPQVNKLVRFNTQQAINVDIALILPGVVGAIAGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFP 284          
BLAST of mRNA_H-paniculata_contig16379.3646.1 vs. uniprot
Match: D8LTM8_ECTSI (TIC 20 related, plastid import n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTM8_ECTSI)

HSP 1 Score: 245 bits (626), Expect = 5.960e-71
Identity = 145/328 (44.21%), Postives = 201/328 (61.28%), Query Frame = 1
Query:  229 ETVEQSVARLRQTAAVFREQAAQLEDK*EEDRRAGADRSFNSFDSNKDGEVDVQELQAGLAGPLRRSFTKQLTARMGLRPSGEEVDARIAQLPGGSLFPDDLARKLIAVYDRNSDGVFQRSEFAPAEELCARLKNMFREQQEEERQARVAERERQ----AAEKITAQGGSGVVATTEGGINDGAPTSADKALSAFSYLLPLADGLACGGHLFASHPEQMAVLQPLVAVLFALRSLPFATLVGFFGLSTLSNNPQVNKLVRFNMKQAINFDIILIVPGILGALVSASLGHDACKLAPLTEAASDV-FVALLVAIAYSVGPQWSGSSPTS 1197
            E   +  A+LR  AA  R QA +LE K + +++  A  +F+SFD+N DG VDV+EL AGL G LR+ F K++T  M  +PS  EVD RI+++PGGSL P +LA+KLI  YD N DGV Q SEFA   ++  RL ++F ++ +E R    A RER+     A+K   +  +  +A  E   NDG PT  DK LS   Y LPL D L  G H+F + P Q++ L+PLVA+L   RSLPF+ L+ FFGL   +  P+VNKLVRFN++QA+  DI +  P I   ++++ LG D+ KLAPL    +DV FV ++  + YS+     G  P S
Sbjct:   82 EEAAEKAAKLRAFAAELRLQAEELESKRDSEKQQAAQEAFDSFDTNDDGTVDVKELIAGLEGQLRKDFIKRMTKTMKRKPSPAEVDERISEMPGGSLLPMELAQKLIESYDTNGDGVLQPSEFASKADMRVRLDSLFADRAQEARLEAAAAREREIENRGADKARQEAKARGLALPED-FNDGPPTITDKLLSVLPYTLPLMDSLVFGAHIFQTFPTQLSFLEPLVAILLIYRSLPFSGLILFFGLQWFAAKPEVNKLVRFNLRQAVILDIAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIGVLPES 408          
BLAST of mRNA_H-paniculata_contig16379.3646.1 vs. uniprot
Match: A0A6H5KUU9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU9_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 8.320e-65
Identity = 128/217 (58.99%), Postives = 155/217 (71.43%), Query Frame = 1
Query:  544 LIAVYDRNSDGVFQRSEFAPAEELCARLKNMFREQQEEERQARVAERERQAAEKITAQGGSGVVATTEGGINDGAPTSADKALSAFSYLLPLADGLACGGHLFASHPEQMAVLQPLVAVLFALRSLPFATLVGFFGLSTLSNNPQVNKLVRFNMKQAINFDIILIVPGILGALVSASLGHDACKLAPLTEAASDV-FVALLVAIAYSVGPQWSGSSP 1191
            L+  YD+N DG+ Q+SEFAP EEL  RL+N+F +Q+EEER AR+         K+     +G V  + G +NDG  T+ADKALSA  Y+LPLADG+    HLF + PEQ A  QPL AVL ALRS+PFATLVGFF LS  S+NPQ+NKLVRFNM+QAIN DI LI+PG++GA+  A LG DA KLAPL  A SDV FVALL A+AYSVG   +GS P
Sbjct:   40 LVRSYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXXKMRPD--AGAVEVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLVGFFSLSVGSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFP 254          
BLAST of mRNA_H-paniculata_contig16379.3646.1 vs. uniprot
Match: A0A6H5KVD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD7_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 7.870e-52
Identity = 105/172 (61.05%), Postives = 127/172 (73.84%), Query Frame = 1
Query:  679 ERERQAAEKITAQGGSGVVATTEGGINDGAPTSADKALSAFSYLLPLADGLACGGHLFASHPEQMAVLQPLVAVLFALRSLPFATLVGFFGLSTLSNNPQVNKLVRFNMKQAINFDIILIVPGILGALVSASLGHDACKLAPLTEAASDV-FVALLVAIAYSVGPQWSGSSP 1191
            ER+RQ  +K+     +G V  + G +NDG  T+ADKALSA  Y+LPLADG+    HLF + PEQ A  +PLVAVL ALRS+PFATL+GFF LS  S+NPQ+NKLVRFNM+QAIN DI LI+PG++GA+  A LG DA KLAPL  A SDV FVALL A+AYSVG   +GS P
Sbjct:    3 ERQRQMDDKMRPD--AGAVEVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAEPLVAVLLALRSVPFATLIGFFSLSVGSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFP 172          
BLAST of mRNA_H-paniculata_contig16379.3646.1 vs. uniprot
Match: A0A6H5KCI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI4_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 6.450e-49
Identity = 115/237 (48.52%), Postives = 140/237 (59.07%), Query Frame = 1
Query:  484 DARIAQLPGGSLFPDDLARKLIAVYDRNSDGVFQRSEFAPAEELCARLKNMFREQQEEERQARVAERERQAAEKITAQGGSGVVATTEGGINDGAPTSADKALSAFSYLLPLADGLACGGHLFASHPEQMAVLQPLVAVLFALRSLPFATLVGFFGLSTLSNNPQVNKLVRFNMKQAINFDIILIVPGILGALVSASLGHDACKLAPLTEAASDV-FVALLVAIAYSVGPQWSGSSP 1191
            D RIA LPGG+LFPD+LA KLI  YD N +G+ Q+SEFAP EEL  RL+N+F +Q+EE+R AR+ ER+RQ  + +    G+ VV  + G +NDG   +AD ALSA  YLLPLADG+    HLF   PEQ A  QPL A                                      AIN DI LI+PG++GA+  A LG DA KLAPL  A SDV FVALL A+AYSVG   +GS P
Sbjct:   21 DERIAGLPGGTLFPDELALKLIQTYDHNGNGLLQQSEFAPTEELRTRLENLFSQQREEKRLARMEERQRQMDDNMRPDAGAVVV--SPGDVNDGLVNTADNALSALPYLLPLADGIVFAAHLFGVFPEQTAWAQPLAA--------------------------------------AINVDIALILPGVVGAIAGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFP 217          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16379.3646.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2I6U1M4_SACJA9.740e-13762.72Tic20-like protein n=15 Tax=Saccharina japonica Ta... [more]
D8LS19_ECTSI3.210e-11756.23EF-hand domain-containing protein n=7 Tax=Ectocarp... [more]
D7FRG5_ECTSI5.720e-11756.00EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
D8LS20_ECTSI7.740e-9855.04EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JY95_9PHAE2.760e-9254.61EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
A0A6H5JBJ0_9PHAE1.250e-7352.82EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D8LTM8_ECTSI5.960e-7144.21TIC 20 related, plastid import n=2 Tax=Ectocarpus ... [more]
A0A6H5KUU9_9PHAE8.320e-6558.99Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVD7_9PHAE7.870e-5261.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCI4_9PHAE6.450e-4948.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16379contigH-paniculata_contig16379:617..4000 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score281.2
Seed ortholog evalue5.1e-73
Seed eggNOG ortholog2880.D7FRG4
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0009507,GO:0009526,GO:0009528,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009706,GO:0009941,GO:0016020,GO:0019866,GO:0031090,GO:0031967,GO:0031969,GO:0031975,GO:0031976,GO:0031984,GO:0034357,GO:0042170,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0055035
EggNOG free text desc.protein transport
EggNOG OGs2BYWW@1,2QUSD@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1922
Cds size807
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16379.3646.1prot_H-paniculata_contig16379.3646.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig16379 1300..3547 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929307.2388618-UTR-H-paniculata_contig16379:616..10771622929307.2388618-UTR-H-paniculata_contig16379:616..1077Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig16379 617..1077 -
1691480808.5567553-UTR-H-paniculata_contig16379:616..10771691480808.5567553-UTR-H-paniculata_contig16379:616..1077Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig16379 617..1077 -
1622929307.2523463-UTR-H-paniculata_contig16379:1098..12991622929307.2523463-UTR-H-paniculata_contig16379:1098..1299Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig16379 1099..1299 -
1691480808.5688157-UTR-H-paniculata_contig16379:1098..12991691480808.5688157-UTR-H-paniculata_contig16379:1098..1299Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig16379 1099..1299 -
1622929307.438125-UTR-H-paniculata_contig16379:3547..40001622929307.438125-UTR-H-paniculata_contig16379:3547..4000Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig16379 3548..4000 -
1691480808.6118271-UTR-H-paniculata_contig16379:3547..40001691480808.6118271-UTR-H-paniculata_contig16379:3547..4000Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig16379 3548..4000 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929307.266185-CDS-H-paniculata_contig16379:1299..15481622929307.266185-CDS-H-paniculata_contig16379:1299..1548Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16379 1300..1548 -
1691480808.5807908-CDS-H-paniculata_contig16379:1299..15481691480808.5807908-CDS-H-paniculata_contig16379:1299..1548Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16379 1300..1548 -
1622929307.4251664-CDS-H-paniculata_contig16379:2989..35471622929307.4251664-CDS-H-paniculata_contig16379:2989..3547Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16379 2990..3547 -
1691480808.6002147-CDS-H-paniculata_contig16379:2989..35471691480808.6002147-CDS-H-paniculata_contig16379:2989..3547Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16379 2990..3547 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig16379.3646.1

>prot_H-paniculata_contig16379.3646.1 ID=prot_H-paniculata_contig16379.3646.1|Name=mRNA_H-paniculata_contig16379.3646.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=269bp
MGLRPSGEEVDARIAQLPGGSLFPDDLARKLIAVYDRNSDGVFQRSEFAP
AEELCARLKNMFREQQEEERQARVAERERQAAEKITAQGGSGVVATTEGG
INDGAPTSADKALSAFSYLLPLADGLACGGHLFASHPEQMAVLQPLVAVL
FALRSLPFATLVGFFGLSTLSNNPQVNKLVRFNMKQAINFDIILIVPGIL
GALVSASLGHDACKLAPLTEAASDVFVALLVAIAYSVGPQWSGSSPTSFR
FSAALTARIRSRTTTCNC*
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mRNA from alignment at H-paniculata_contig16379:617..4000-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig16379.3646.1 ID=mRNA_H-paniculata_contig16379.3646.1|Name=mRNA_H-paniculata_contig16379.3646.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3384bp|location=Sequence derived from alignment at H-paniculata_contig16379:617..4000- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTCGTGAATGCCGTGCCTCTCCTAGCCCTCCTCCTGGCCTCTGGAGC CGACGCCTTCGTGACCCCCGTCAACAACCGCGGGGCGTCGCTGGCGCCTG TTTGCCAGCGGTCGGTGATGCCGATCACTTCGTTGGCCCGGACGTGGTCG TCGACAGCACCGCGCCGGTGCACCTCTTCCGTTGCGGCCGTCTGCATGTC GGCGCCGGATACCACCGAGACCGCCAGCGAGACCGTCGAGCAGTCGGTCG CGAGACTCCGCCAGACCGCTGCAGTCTTCCGAGAACAGGCTGCTCAGCTC GAGGATAAGTGAGAAGAAGACCGCCGTGCAGGCGCTGACCGCTCCTTCAA TAGCTTTGACTCCAATAAGGACGGCGAGGTCGACGTCCAAGAGCTCCAGG CCGGCCTCGCCGGTCCACTACGCCGAAGCTTTACCAAGCAGCTCACCGCG CGTATGGGCCTCAGGCCTAGCGGTGAGGAGGTGGACGCTCGCATCGCCCA GCTTCCGGGGGGATCCCTGTTCCCCGACGACTTGGCGCGGAAGTTGATCG CGGTATACGACCGAAACAGCGACGGAGTTTTCCAGCGTTCGGAGTTCGCG CCCGCGGAGGAGCTCTGTGCCCGACTCAAGAACATGTTTCGCGAGCAGCA GGAGGAGGAGCGCCAGGCCAGGGTAGCCGAACGGGAGCGGCAGGCGGCCG AGAAGATCACGGCGCAGGGGGGGTCGGGCGTGGTGGCCACTACCGAGGGC GGGATCAACGACGGCGCACCGACGTCGGCGGACAAGGCGTTGTCTGCGTT TTCGTACCTGCTACCACTAGCGGATGGGTTGGCGTGTGGGGGGCATTTGT TTGCATCGCACCCGGAGCAGATGGCGGTGTTACAGCCTTTGGTGGCGGTT TTGTTTGCTCTTCGATCTTTACCGTTCGCGACGCTGGTTGGCTTCTTCGG TTTGTCTACATTGAGCAATAACCCGCAGGTCAACAAGCTTGTACGGTTCA ACATGAAACAGGTGAGGGTTGTGTATAGCCGGGACTTTCTCGACGTCGAC ATGTTTGGTGTATTGTGGAGGACGTGTTGTTCACAGACAGTGCCGAAGCA TATCTTGTGGCGCCGGGAGTCGTCGGCGTAAATTCGTAGATCTCGAGTCT TCGGGTGGTATCAAACGTAACGTCGACAGCACGTTTAGAAGTAGCGTTTA AATATTGTCCAACATAAAAAGCTACTTACAGTTAATTTTCTTGCCCCATA GAATACCCTCGAGTATTAGGAACCTTGTATTCACATAAATGGTATAATGC TGGTAAACCGTTTTTCTTTGAATTACCTAATTCTGCTCCTTCAAAATTAT CCTCTTGACCTTGTTAATATCATATATTTATAGCGTCATAACCATGAATA CGTGTTTTGTTTTTTACATATGTTACAAAACATGGGCCGACGTTGACTGT AGACGGCTGCTTATTGGCTCGCGTATGCTAGTACAGCATTAGATACATGC GCAGTGCTCGTGGCGTGCCACACTAGCCATGGAACGTGGATTATTGGTTC CTTGACGTTGGGGTACCCCGTACCTAGATGGATGTTATATATTTCAGTTT CAGTGAGACGAGCGTCCCTCTGTGTCTCCCACCAGCGTGAGCTTTTACAC AAAGAAACAACTTAACATTATTTGGTTAACGTCTGATGTATCAACATGGT CAGCTAACCTCCAAGTGCGGTGTTCGGCGTGACAGGAGATCACGCTTCCT CGATGGGAGTATCCTACCGCAGCTGTAATTGTCTAGATGTATGCATGGAG CCTTGAGAAGGATGACGCAGATGGACGACAGCCTATCGTGTCCTTGTTTG CTCCTGACGTCGTGGGATTTGTTCTCGTGTTGATGGACGATTTGCACACC CAATAGCCAACAGCTTCCGAAATGGTAGATGGGCCTGGAAGCATCGCCGG CGGGTTTTCTTGCAATCGTGTTGATAAAAGACGCACTAAGCTGCAATCTG TAGTTTCAACGCAGCTGTCGCCGTTGGTGGAGATCGCCGCATGGTTTATG CTGTAAGCACTTATCGTCCAATGATTCACAATTCCTGCTAACAGACAGGC ATGCACTGTCTCGGCGATATGGACGTAATCTATGGCGGTCATTCTGCTGC ACCAGGTCGGAATTTCTGCGAGCACCCGGCAACTGAACTCGTCGAAATCT ATCCAGCACCCGCCATCGCTCGGCTCCAATTGTCTGGGCTTTGTCCTTTC GTACACCCCATATTCAGTCTCTGTACGTTTGCTTGTTCACGGCGAGCCGT TGGATAGCCGTGTTCATCGTGCCTCATGCACCAGCCACCCCTAGATATGA ACCTGCAATCCCCCTCCCCCCTTCCTCCCTTAGTACTGTCATCCTACAAA CATACTCATCTTGACCCCCATTCCCCCCCAACTCCTTCTCCCCTTTTGTC AGGCGATCAACTTCGACATTATTCTCATCGTGCCGGGGATACTGGGAGCG TTGGTGTCCGCATCGCTGGGCCACGACGCGTGTAAGTTAGCACCGTTGAC GGAAGCCGCATCGGACGTGTTCGTGGCTCTTTTAGTGGCAATAGCTTACT CGGTGGGTCCACAGTGGTCCGGGAGTTCCCCAACAAGCTTCCGTTTTTCG GCCGCATTAACCGCGAGAATCCGGAGCAGGACGACGACTTGTAATTGTTA ATGGTTTCTTCTGTGTGTGTGTTTCCAGTTTGGCTTAGGTCCAGGGGGTA TTCTTCTTATTGTATCGACGATTCGCTAGTGTTGGGAAAAATCGCGCGGG TATCTTTGCAATAGAGAAGGTTTGTACAGAGGCGGGAAAGGGGTCGTTTG TGTCAGGTTGCATTGTGGTTAAATCAGGGACTTTTCGAGGTGTGAGAACT CGAGCAGTTTGTGTTTCATACTGTCACATGACGAGGCTTGTTTTCAATGT TATTACTTGTTGTTTTTCGATGTTTGGTATGTCTGTTTTTTAGAGTTTGT GTGAGTTGGCAAGTTCTTGTCAATAGGTGTGCTCGACGTGTGGTTTAGTA CACTGTCGTCGTGGAATCATTGCTCCTTGATAAACTCTTTGATGTCCATG TAATCATAGCGATCGCGTTAGACTAATACAATCAAATATATTGTTATTCT TAATAGTGTCGCAGCAGTTAGTTATATATTTCTTGGGGTAGTGGTGGTGT GGTGAGAGTCTTCAAGGTTTCCAGTTGTACTGCAACTAAAAAGATGTTTC CTCGTGTTACATACCGTAAGAAACACATATTTTCTACATCGTTTTCATGT GCCCTGCCTCTGGGAAATAGCGACAGGCAGCGATCTCGGGCTGGGTGGAG AATGCGAGTGAAAGAGCAGACGCTTATCCTTCAG
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Coding sequence (CDS) from alignment at H-paniculata_contig16379:617..4000-

>mRNA_H-paniculata_contig16379.3646.1 ID=mRNA_H-paniculata_contig16379.3646.1|Name=mRNA_H-paniculata_contig16379.3646.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1614bp|location=Sequence derived from alignment at H-paniculata_contig16379:617..4000- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGCCTCAGGCCTAGCGGTGAGGAGGTGGACGCTCGCATCGCCCAGCT
TCCGGGGGGATCCCTGTTCCCCGACGACTTGGCGCGGAAGTTGATCGCGG
TATACGACCGAAACAGCGACGGAGTTTTCCAGCGTTCGGAGTTCGCGCCC
GCGGAGGAGCTCTGTGCCCGACTCAAGAACATGTTTCGCGAGCAGCAGGA
GGAGGAGCGCCAGGCCAGGGTAGCCGAACGGGAGCGGCAGGCGGCCGAGA
AGATCACGGCGCAGGGGGGGTCGGGCGTGGTGGCCACTACCGAGGGCGGG
ATCAACGACGGCGCACCGACGTCGGCGGACAAGGCGTTGTCTGCGTTTTC
GTACCTGCTACCACTAGCGGATGGGTTGGCGTGTGGGGGGCATTTGTTTG
CATCGCACCCGGAGCAGATGGCGGTGTTACAGCCTTTGGTGGCGGTTTTG
TTTGCTCTTCGATCTTTACCGTTCGCGACGCTGGTTGGCTTCTTCGGTTT
GTCTACATTGAGCAATAACCCGCAGGTCAACAAGCTTGTACGGTTCAACA
TGAAACAGATGGGCCTCAGGCCTAGCGGTGAGGAGGTGGACGCTCGCATC
GCCCAGCTTCCGGGGGGATCCCTGTTCCCCGACGACTTGGCGCGGAAGTT
GATCGCGGTATACGACCGAAACAGCGACGGAGTTTTCCAGCGTTCGGAGT
TCGCGCCCGCGGAGGAGCTCTGTGCCCGACTCAAGAACATGTTTCGCGAG
CAGCAGGAGGAGGAGCGCCAGGCCAGGGTAGCCGAACGGGAGCGGCAGGC
GGCCGAGAAGATCACGGCGCAGGGGGGGTCGGGCGTGGTGGCCACTACCG
AGGGCGGGATCAACGACGGCGCACCGACGTCGGCGGACAAGGCGTTGTCT
GCGTTTTCGTACCTGCTACCACTAGCGGATGGGTTGGCGTGTGGGGGGCA
TTTGTTTGCATCGCACCCGGAGCAGATGGCGGTGTTACAGCCTTTGGTGG
CGGTTTTGTTTGCTCTTCGATCTTTACCGTTCGCGACGCTGGTTGGCTTC
TTCGGTTTGTCTACATTGAGCAATAACCCGCAGGTCAACAAGCTTGTACG
GTTCAACATGAAACAGGCGATCAACTTCGACATTATTCTCATCGTGCCGG
GGATACTGGGAGCGTTGGTGTCCGCATCGCTGGGCCACGACGCGTGTAAG
TTAGCACCGTTGACGGAAGCCGCATCGGACGTGTTCGTGGCTCTTTTAGT
GGCAATAGCTTACTCGGTGGGTCCACAGTGGTCCGGGAGTTCCCCAACAA
GCTTCCGTTTTTCGGCCGCATTAACCGCGAGAATCCGGAGCAGGACGACG
ACTTGTAATTGTTAAGCGATCAACTTCGACATTATTCTCATCGTGCCGGG
GATACTGGGAGCGTTGGTGTCCGCATCGCTGGGCCACGACGCGTGTAAGT
TAGCACCGTTGACGGAAGCCGCATCGGACGTGTTCGTGGCTCTTTTAGTG
GCAATAGCTTACTCGGTGGGTCCACAGTGGTCCGGGAGTTCCCCAACAAG
CTTCCGTTTTTCGGCCGCATTAACCGCGAGAATCCGGAGCAGGACGACGA
CTTGTAATTGTTAA
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