mRNA_H-paniculata_contig16365.3641.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16365.3641.1 vs. uniprot
Match: D7FJE9_ECTSI (PTIF2, plastid translation intiation factor 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJE9_ECTSI) HSP 1 Score: 509 bits (1310), Expect = 1.810e-170 Identity = 264/312 (84.62%), Postives = 294/312 (94.23%), Query Frame = 1
Query: 31 GSISLLDAIRETKVVSGEAGGITQHISAYQVSTNAGSNVTFVDTPGHAAFGEMRARGANATDIVVLVVAADDGVMDQTKESIATARMASVPIVVAINKVDKPAADVQKVQNELMTFDLLPEEFGGDTQVAMVSAKQKTGLDELLEKILLQAEVLELKSNPNRMAQGVVIEAQMEKGMGTVGTILIQRGTLRVGDVFVAGGAWGKVRALMDHKGKRITEAGPSMPVQVGGFDGVPDAGEVFTVCEREDVARDLAEARRKIAREATAATLQGGLKSSVEAILSGEADTGKELFELPVMIKADVQGSEQALFNAL 966
G SLLDAIRETKVV+GEAGGITQH+SAYQV T+AG+++TFVDTPGHAAF EMR RGANATDIVVLVVAADDGVM+QTKESIATARMA VPIVVAINKVDK ADVQKVQNELMTFDLLPEEFGGDTQVAMVSAKQK+GLDELLEKILLQ+EVLELKSNP+R A+GV+IEA+ME+G+GTVGT+LIQRGTLRVGD+FVAGGAWG+V+AL+DH+G+RI EAGPS PVQVGGFDGVPDAG+VFTV +RED+ARDLAEARRKIARE++AA LQGGLK+ + +ILSGEAD GKELFELPVMIKADVQGSEQAL AL
Sbjct: 527 GKTSLLDAIRETKVVAGEAGGITQHVSAYQVKTDAGADLTFVDTPGHAAFSEMRVRGANATDIVVLVVAADDGVMEQTKESIATARMADVPIVVAINKVDKEGADVQKVQNELMTFDLLPEEFGGDTQVAMVSAKQKSGLDELLEKILLQSEVLELKSNPDRSAEGVIIEARMERGLGTVGTVLIQRGTLRVGDIFVAGGAWGRVKALIDHQGRRIKEAGPSTPVQVGGFDGVPDAGDVFTVVDREDIARDLAEARRKIARESSAAILQGGLKNDMLSILSGEADEGKELFELPVMIKADVQGSEQALQTAL 838
BLAST of mRNA_H-paniculata_contig16365.3641.1 vs. uniprot
Match: A0A835ZAQ9_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAQ9_9STRA) HSP 1 Score: 409 bits (1052), Expect = 4.840e-137 Identity = 216/314 (68.79%), Postives = 257/314 (81.85%), Query Frame = 1
Query: 31 GSISLLDAIRETKVVSGEAGGITQHISAYQVSTNAGSNVTFVDTPGHAAFGEMRARGANATDIVVLVVAADDGVMDQTKESIATARMASVPIVVAINKVDKPAADVQKVQNELMTFDLLPEEFGGDTQVAMVSAKQKTGLDELLEKILLQAEVLELKSNPNRMAQGVVIEAQMEKGMGTVGTILIQRGTLRVGDVFVAGGAWGKVRALMDHKGKRITEAGPSMPVQVGGFDGVPDAGEVFTVCEREDVARDLAEARRKIAREATAATLQGGLKSSVEAILSGEADTG-KELFELPVMIKADVQGSEQALFNALR 969
G +LLDAIR KV SGEAGGITQ I AYQV+T +G VTF+DTPGHAAF EMRARGANATD+VVLVVAADDGV +QTKE IATA++ASVPIVVAINK+DKP AD +V NELM + LL EFGGD +V VSAK K GLD+LL+KILLQAEVLELK+NPNR AQGVVIEA M++G+GTV T LIQRGTL++GD+FVAG +WGKVR LM+H G RITEAGPS PVQV GFDGVP AG+VFTV ++E+ AR + ++RRK+ RE AA +QG LK +VEAILSG + G KE ELP++++AD GS +AL ++LR
Sbjct: 89 GKTTLLDAIRSAKVASGEAGGITQSIGAYQVTTASGQEVTFIDTPGHAAFSEMRARGANATDVVVLVVAADDGVKEQTKECIATAKLASVPIVVAINKMDKPGADPARVLNELMNYQLLSTEFGGDVEVGKVSAKNKDGLDDLLDKILLQAEVLELKANPNRAAQGVVIEAGMKQGLGTVATTLIQRGTLKIGDIFVAGASWGKVRLLMNHTGARITEAGPSTPVQVVGFDGVPGAGDVFTVVDKEETARTITDSRRKLLRENQAAQMQGDLKGNVEAILSGMLEDGAKEKMELPIVLRADGPGSAEALASSLR 402
BLAST of mRNA_H-paniculata_contig16365.3641.1 vs. uniprot
Match: A0A7S3Y8J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8J2_HETAK) HSP 1 Score: 375 bits (964), Expect = 4.860e-122 Identity = 201/314 (64.01%), Postives = 248/314 (78.98%), Query Frame = 1
Query: 31 GSISLLDAIRETKVVSGEAGGITQHISAYQVSTNAGSNVTFVDTPGHAAFGEMRARGANATDIVVLVVAADDGVMDQTKESIATARMASVPIVVAINKVDKPAADVQKVQNELMTFDLLPEEFGGDTQVAMVSAKQKTGLDELLEKILLQAEVLELKSNPNRMAQGVVIEAQMEKGMGTVGTILIQRGTLRVGDVFVAGGAWGKVRALMDHKGKRITEAGPSMPVQVGGFDGVPDAGEVFTVCEREDVARDLAEARRKIAREATAATLQGGLKSSVEAIL-SGEADTGKELFELPVMIKADVQGSEQALFNALR 969
G SLLDAIRE +V GEAGGITQHI AYQV T +G+ VTF+DTPGHAAF MRARGAN TDIV+LVVAADDGVM+QT +SIA A+ A VP+VVA NK+DK ADVQKV+NELM +DLL EE+GGD A VSAKQ+ GLD+LLEK+LLQAE+L+L++NP+R AQG VIEA++E+G+G VGT LIQRGTLRVGDVF+AG +WGKVRAL+D +G RI EAGPS+PVQV GF+ P AG+ V + E AR +AEAR +++ A L+G L+S++ AI +GEA G E + V+IKADVQGS +AL ++LR
Sbjct: 232 GKTSLLDAIREARVAGGEAGGITQHIGAYQVETVSGATVTFIDTPGHAAFSAMRARGANVTDIVILVVAADDGVMEQTADSIACAKQAGVPVVVAYNKIDKDTADVQKVKNELMQYDLLMEEYGGDVMGAEVSAKQRLGLDDLLEKVLLQAELLDLRANPDRAAQGAVIEARIERGLGAVGTTLIQRGTLRVGDVFLAGASWGKVRALLDTEGNRIKEAGPSVPVQVVGFNTAPLAGDTLVVVDSEATARQIAEARGGLSKTRDALALEGDLRSNLRAIFETGEALDGVERKTVNVVIKADVQGSAEALADSLR 545
BLAST of mRNA_H-paniculata_contig16365.3641.1 vs. uniprot
Match: A0A7S2Y1F3_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1F3_9STRA) HSP 1 Score: 365 bits (938), Expect = 3.400e-118 Identity = 195/314 (62.10%), Postives = 242/314 (77.07%), Query Frame = 1
Query: 31 GSISLLDAIRETKVVSGEAGGITQHISAYQVSTNAGSNVTFVDTPGHAAFGEMRARGANATDIVVLVVAADDGVMDQTKESIATARMASVPIVVAINKVDKPAADVQKVQNELMTFDLLPEEFGGDTQVAMVSAKQKTGLDELLEKILLQAEVLELKSNPNRMAQGVVIEAQMEKGMGTVGTILIQRGTLRVGDVFVAGGAWGKVRALMDHKGKRITEAGPSMPVQVGGFDGVPDAGEVFTVCEREDVARDLAEARRKIAREATAATLQGGLKSSVEAILS-GEADTGKELFELPVMIKADVQGSEQALFNALR 969
G SLLDAIR T+V GEAGGITQHI AYQVST+ G +TF+DTPGHAAF EMR+RGA+ATDIV+LVVAADDGV +QT ESIA A+ A P++VA NK+DKP ADVQK++N+LM +DLL EEFGG+ A VSAKQ TGLDELLEK++LQAEV+ELK+NPNR+ GV++EA++EKG+G V T LIQRGT+RVGD+F+AG +WG+VRAL D +ITEAGPS PV++ GFD +P AG+ F E E AR++AEAR KI+R+ +A+ L SSV I G G E + V+IKADVQGS +AL AL+
Sbjct: 228 GKTSLLDAIRSTRVTEGEAGGITQHIGAYQVSTSKGQPITFIDTPGHAAFNEMRSRGADATDIVILVVAADDGVKEQTAESIACAKQAGKPVLVAFNKIDKPGADVQKIKNQLMQYDLLMEEFGGEIMGAEVSAKQGTGLDELLEKVMLQAEVMELKANPNRLVSGVIVEAEVEKGLGPVATTLIQRGTVRVGDIFLAGTSWGRVRALRDDSDNKITEAGPSAPVKIIGFDSLPLAGDTFIGVESEQDARNIAEARGKISRDRSASKFNTDLLSSVANIFEFGAGLDGIERKTVNVVIKADVQGSAEALATALK 541
BLAST of mRNA_H-paniculata_contig16365.3641.1 vs. uniprot
Match: A0A7S3L358_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L358_9STRA) HSP 1 Score: 341 bits (874), Expect = 8.000e-109 Identity = 186/316 (58.86%), Postives = 237/316 (75.00%), Query Frame = 1
Query: 31 GSISLLDAIRETKVVSGEAGGITQHISAYQVSTNAGSNVTFVDTPGHAAFGEMRARGANATDIVVLVVAADDGVMDQTKESIATARMASVPIVVAINKVDKPAADVQKVQNELMTFDLLPEEFGGDTQVAMVSAKQKTGLDELLEKILLQAEVLELKSNPNRMAQGVVIEAQMEKGMGTVGTILIQRGTLRVGDVFVAGGAWGKVRALM---DHKGKRITEAGPSMPVQVGGFDGVPDAGEVFTVCEREDVARDLAEARRKIAREATAATLQGGLKSSVEAILSGEADTGKELFELPVMIKADVQGSEQALFNALR 969
G SLLDAIR+T V +GEAGGITQHI+AYQV N G +TF+DTPGHAAF +MR RGAN TD+V+LVVAADDGV QT +SI AR A VP++VAINK DK AD KV +L +D+L EEFGGD + +SAK+ T LD+L++KI+LQAE+ +LK+NP+R A+G+VIEA +EKG+GTV T LI++GT+RVGDVFVAG +G+V+AL+ D K R+ EAGPSMPVQV GF+G+P AG++ V + E AR LAE R++IARE ++ Q GL SSV + SG KE E+ V++KADVQGS +AL ALR
Sbjct: 213 GKTSLLDAIRKTDVTAGEAGGITQHIAAYQVGHN-GKKITFIDTPGHAAFTDMRERGANVTDMVILVVAADDGVKQQTADSIMCARQAGVPLIVAINKCDKETADPLKVMTDLTAYDVLTEEFGGDVLSSQISAKEGTNLDDLMDKIMLQAEIQDLKANPDRDAEGIVIEANVEKGLGTVATTLIKKGTIRVGDVFVAGATYGRVKALLSTTDSK-TRLNEAGPSMPVQVVGFEGIPSAGDILAVAQDEQTARALAENRQRIARERESSFYQDGLMSSVNMVFSGG---NKEKREMCVLVKADVQGSAEALTRALR 523
BLAST of mRNA_H-paniculata_contig16365.3641.1 vs. uniprot
Match: A0A7S2EJV6_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EJV6_TRICV) HSP 1 Score: 338 bits (866), Expect = 1.150e-108 Identity = 191/314 (60.83%), Postives = 234/314 (74.52%), Query Frame = 1
Query: 31 GSISLLDAIRETKVVSGEAGGITQHISAYQVSTNAGSNVTFVDTPGHAAFGEMRARGANATDIVVLVVAADDGVMDQTKESIATARMASVPIVVAINKVDKPAADVQKVQNELMTFDLLPEEFGGDTQVAMVSAKQKTGLDELLEKILLQAEVLELKSNPNRMAQGVVIEAQMEKGMGTVGTILIQRGTLRVGDVFVAGGAWGKVRALMDHKGK-RITEAGPSMPVQVGGFDGVPDAGEVFTVCEREDVARDLAEARRKIAREATAATLQGGLKSSVEAILSGEADTGKELFELPVMIKADVQGSEQALFNALR 969
G SLLDAIR T VVSGEAGGITQ ISAYQV T+ G +TF+DTPGHAAF +MR RGAN TDI++LVVAADD V QT +SIA AR A VP+VVA+NK D ADV +V+++L +DLL E+ GG+ + VSAK K GLD+LL+K++LQAEV +LK+NPNR AQG+VIEA ++KG+GTV T LI+RGT+RVGDVFVAG GKVRAL+ GK R+ EAGPSMPV V G +GVP AG++ V E E +AR LA++R +I RE + Q L SSV I SG A KE E+ V+IKADVQGS +AL +LR
Sbjct: 218 GKTSLLDAIRSTSVVSGEAGGITQAISAYQV-THEGRKITFIDTPGHAAFTDMRERGANITDIIILVVAADDSVKQQTADSIACARQAGVPVVVAVNKCDLETADVNRVKSDLTGYDLLTEDLGGEVMCSEVSAKTKMGLDDLLDKVMLQAEVEDLKANPNRDAQGIVIEASVQKGLGTVATTLIKRGTIRVGDVFVAGSTSGKVRALIATDGKTRLKEAGPSMPVNVVGLEGVPAAGDMLVVAEDEQMARQLADSRARIEREREGSNYQSDLLSSVSDIFSGAAM--KEKREMCVVIKADVQGSAEALARSLR 528
BLAST of mRNA_H-paniculata_contig16365.3641.1 vs. uniprot
Match: A4U0B1_9PROT (Translation initiation factor IF-2 n=1 Tax=Magnetospirillum gryphiswaldense TaxID=55518 RepID=A4U0B1_9PROT) HSP 1 Score: 333 bits (854), Expect = 1.900e-108 Identity = 181/308 (58.77%), Postives = 226/308 (73.38%), Query Frame = 1
Query: 46 LDAIRETKVVSGEAGGITQHISAYQVSTNAGSNVTFVDTPGHAAFGEMRARGANATDIVVLVVAADDGVMDQTKESIATARMASVPIVVAINKVDKPAADVQKVQNELMTFDLLPEEFGGDTQVAMVSAKQKTGLDELLEKILLQAEVLELKSNPNRMAQGVVIEAQMEKGMGTVGTILIQRGTLRVGDVFVAGGAWGKVRALMDHKGKRITEAGPSMPVQVGGFDGVPDAGEVFTVCEREDVARDLAEARRKIAREATAA-TLQGGLKSSVEAILSGEADTGKELFELPVMIKADVQGSEQALFNAL 966
+DA+RET VVSGEAGGITQHI AYQV+ +G +TF+DTPGH AF MRARGA TDIVVLVVAADDG+M QT E+I A+ A VPI+VAINK+DKP A ++V+ EL+ DL+ EE GGD VSAK++ L+ L E ILLQAEVL+LK+NP+R AQG V+EA+MEKG G V T+L+Q+GTL+VGDVFVAG WGKVRAL+D KG R+ EAGPS PV+V G DG P AG+ F E E AR++A R+++ REA + +G L+ AI +GEA ELPV++K DVQGS +A+ AL
Sbjct: 1 MDALRETDVVSGEAGGITQHIGAYQVTMRSGDKITFIDTPGHEAFTAMRARGAKVTDIVVLVVAADDGIMPQTVEAIRHAKAAGVPIIVAINKIDKPGATPERVRQELLQHDLVTEELGGDVLAVEVSAKKRMNLERLEEAILLQAEVLDLKANPDRTAQGTVVEAKMEKGRGPVATVLVQKGTLKVGDVFVAGSEWGKVRALIDDKGHRVDEAGPSTPVEVLGLDGAPAAGDDFVAVEDEARAREIAGYRQRVEREARSKLAARGTLEQMFSAIKAGEAK------ELPVVVKGDVQGSVEAINGAL 302
BLAST of mRNA_H-paniculata_contig16365.3641.1 vs. uniprot
Match: A0A7X5F5A9_9HYPH (Translation initiation factor IF-2 n=1 Tax=Pannonibacter sp. XCT-53 TaxID=2750085 RepID=A0A7X5F5A9_9HYPH) HSP 1 Score: 345 bits (885), Expect = 2.600e-108 Identity = 185/312 (59.29%), Postives = 240/312 (76.92%), Query Frame = 1
Query: 31 GSISLLDAIRETKVVSGEAGGITQHISAYQVSTNAGSNVTFVDTPGHAAFGEMRARGANATDIVVLVVAADDGVMDQTKESIATARMASVPIVVAINKVDKPAADVQKVQNELMTFDLLPEEFGGDTQVAMVSAKQKTGLDELLEKILLQAEVLELKSNPNRMAQGVVIEAQMEKGMGTVGTILIQRGTLRVGDVFVAGGAWGKVRALMDHKGKRITEAGPSMPVQVGGFDGVPDAGEVFTVCEREDVARDLAEARRKIAREATAATLQGGLKSSVEAILSGEADTGKELFELPVMIKADVQGSEQALFNAL 966
G SLLDAIR +KVVSGEAGGITQHI AYQV N G +TF+DTPGHAAF +MRARGA ATDIV+LVVAADDGVM QTKE+I+ A+ A VPI+VAINK+DKP+AD +V+ EL+ +++ E GGDT VSAK T LD LLE +LLQAEVLEL++NP+R A+G+VIEAQ++KG G V T+L+Q+GTLRVGD+ VAGG WGKVRAL+D G ++ EAGPS PV+V GF G P+AG++ V E E AR++A+ R++ RE A ++ G ++S+E ++S G++ E P++IKADVQGS +A+ +AL
Sbjct: 430 GKTSLLDAIRNSKVVSGEAGGITQHIGAYQVEKN-GQKITFIDTPGHAAFTQMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAAGVPIIVAINKIDKPSADPNRVRTELLHDEIVVESMGGDTIDVEVSAKVGTNLDRLLEMVLLQAEVLELRANPDRTAEGLVIEAQLDKGRGPVATVLVQKGTLRVGDILVAGGEWGKVRALLDEDGNQVKEAGPSKPVEVLGFQGTPEAGDMVAVVENESRAREIADYRQRQKREKLA-VVKAGTRASLEQMMSRLQSGGRK--EFPLVIKADVQGSAEAIAHAL 737
BLAST of mRNA_H-paniculata_contig16365.3641.1 vs. uniprot
Match: W7T2T0_9STRA (Translation initiation factor if-2 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2T0_9STRA) HSP 1 Score: 338 bits (868), Expect = 5.400e-108 Identity = 182/312 (58.33%), Postives = 236/312 (75.64%), Query Frame = 1
Query: 31 GSISLLDAIRETKVVSGEAGGITQHISAYQVSTNAGSNVTFVDTPGHAAFGEMRARGANATDIVVLVVAADDGVMDQTKESIATARMASVPIVVAINKVDKPAADVQKVQNELMTFDLLPEEFGGDTQVAMVSAKQKTGLDELLEKILLQAEVLELKSNPNRMAQGVVIEAQMEKGMGTVGTILIQRGTLRVGDVFVAGGAWGKVRALMDHKGKRITEAGPSMPVQVGGFDGVPDAGEVFTVCEREDVARDLAEARRKIAREATAATLQGGLKSSVEAILSGEADTGKELFELPVMIKADVQGSEQALFNAL 966
G SLLDA+RE+ V +GEAGGITQHI AYQV T+A +TF+DTPGHAAF EMRARGAN TD+VVLVVAAD+GV +QT +SI A+ A VPI++A+NKVDKP AD +V ELM +D+L EE+GGD A VSAK++ LD LLEKILLQAE+L+LK+NPNR A G V+E++MEKG+G V T+L+Q+GTLRVGD VAG A+GKVR+L D +GKR+ AGPS+P + G+DGVP AG+ V E E AR++AEARR++ RE + + G +++ V +I D K+ E+ V+IKADVQGS +A+ A+
Sbjct: 205 GKTSLLDAVRESSVATGEAGGITQHIGAYQV-THAHRTITFIDTPGHAAFSEMRARGANVTDLVVLVVAADEGVKEQTIDSIRCAKQAHVPILLAVNKVDKPGADPSRVTQELMKYDVLLEEYGGDVLSAEVSAKKRLNLDGLLEKILLQAEILDLKANPNRSAVGAVVESRMEKGLGPVTTVLVQKGTLRVGDCIVAGAAYGKVRSLTDERGKRLETAGPSVPAVLSGWDGVPAAGDTLIVVESEMQARNVAEARRRLERERSGSATMGSMQAQVLSIFG--TDGVKKRQEVTVVIKADVQGSAEAIATAV 513
BLAST of mRNA_H-paniculata_contig16365.3641.1 vs. uniprot
Match: A0A3B9RHG1_9CAUL (Translation initiation factor IF-2 (Fragment) n=1 Tax=Brevundimonas sp. TaxID=1871086 RepID=A0A3B9RHG1_9CAUL) HSP 1 Score: 330 bits (847), Expect = 5.440e-108 Identity = 178/313 (56.87%), Postives = 235/313 (75.08%), Query Frame = 1
Query: 31 GSISLLDAIRETKVVSGEAGGITQHISAYQVSTNAGSNVTFVDTPGHAAFGEMRARGANATDIVVLVVAADDGVMDQTKESIATARMASVPIVVAINKVDKPAADVQKVQNELMTFDLLPEEFGGDTQVAMVSAKQKTGLDELLEKILLQAEVLELKSNPNRMAQGVVIEAQMEKGMGTVGTILIQRGTLRVGDVFVAGGAWGKVRALMDHKGKRITEAGPSMPVQVGGFDGVPDAGEVFTVCEREDVARDLAEARRKIAREATAATLQGGLKSSVEAILSGEADTG-KELFELPVMIKADVQGSEQALFNAL 966
G SLLDA+R T V GEAGGITQHI AYQV G VTF+DTPGHAAF MRARGAN TDIVVLVVAADDGVM QT E+I A+ A P++VA+NK+DKP A QKV +EL+ ++++ E GGDTQ+ VSAK++ LD LLE IL+QAEV++L++NP+R A+GVVIEA+++KG G VGT+L++RGTL+ GD+ VAGGAWGKVRAL++ + +++T+AGPS+PV++ G D P G+VF V + E AR+L E R+++ RE A + GG S V+ + A G K++ ELPV+IKADVQGS +A+ +L
Sbjct: 8 GKTSLLDALRTTDVAGGEAGGITQHIGAYQVRLEDGQKVTFLDTPGHAAFSAMRARGANVTDIVVLVVAADDGVMPQTIEAIQHAKAAEAPLIVAVNKMDKPGATSQKVVSELLQYEVIAESLGGDTQIIEVSAKERMNLDGLLEAILVQAEVMDLRANPDRSAEGVVIEAKLDKGRGPVGTVLVKRGTLKRGDIVVAGGAWGKVRALLNERNEQLTDAGPSVPVEILGLDEAPSPGDVFAVVDSEARARELTEYRQRVKREK--AQVSGGSVSLVDMM----AKLGSKKINELPVVIKADVQGSGEAIAASL 314 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16365.3641.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16365.3641.1 >prot_H-paniculata_contig16365.3641.1 ID=prot_H-paniculata_contig16365.3641.1|Name=mRNA_H-paniculata_contig16365.3641.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=324bp MSFDFLWCWRGSISLLDAIRETKVVSGEAGGITQHISAYQVSTNAGSNVTback to top mRNA from alignment at H-paniculata_contig16365:1042..5473+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16365.3641.1 ID=mRNA_H-paniculata_contig16365.3641.1|Name=mRNA_H-paniculata_contig16365.3641.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4432bp|location=Sequence derived from alignment at H-paniculata_contig16365:1042..5473+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16365:1042..5473+ >mRNA_H-paniculata_contig16365.3641.1 ID=mRNA_H-paniculata_contig16365.3641.1|Name=mRNA_H-paniculata_contig16365.3641.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1944bp|location=Sequence derived from alignment at H-paniculata_contig16365:1042..5473+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |