mRNA_H-paniculata_contig16353.3636.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16353.3636.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE) HSP 1 Score: 183 bits (465), Expect = 8.120e-55 Identity = 86/200 (43.00%), Postives = 120/200 (60.00%), Query Frame = 1
Query: 10 AVNDKSIVRFDKTVQAVREGEAYRSTAYKLRDKDGVEQVEMGLNLIVDGEYHRWRSLVCPAKEAATREELAWSKRLESVRKDVECFYGILKGRFRILKLPILFRESAQVDNVVWICCILHNMLHSFDGLKFHEPDMDWTGPDGFLDAWLHEDRTIYFGTKGRSSNGPPERVEVEEGFLAMKRRLVTHYTYRVENNEVAWL 609
+ NDKSI+R+D V +RE Y + + + DG G L+VD YH+W +L+ P+K + +LA+SKRLESVRKDVECF+GI+KG FRILKL I + + +DNV + CCILHNMLHS+D E + +W G G +AW H + S+ E VEVE GF +++L+ + YR N++AWL
Sbjct: 41 STNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWL 240
BLAST of mRNA_H-paniculata_contig16353.3636.1 vs. uniprot
Match: A0A6H5JQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM6_9PHAE) HSP 1 Score: 182 bits (461), Expect = 5.240e-54 Identity = 90/213 (42.25%), Postives = 125/213 (58.69%), Query Frame = 1
Query: 10 AVNDKSIVRFDKTVQAVREGEAYRSTAYKLRDKDGVEQVEMGLNLIVDGEYHRWRSLVCPAKEAATREELAWSKRLESVRKDVECFYGILKGRFRILKLPILFRESAQVDNVVWICCILHNMLHSFDGLKFHEPDMDWTGPDGFLDAWLHEDRTIY--FGTKG-----------RSSNGPPERVEVEEGFLAMKRRLVTHYTYRVENNEVAWL 609
A NDK+I+R+D V +R Y YKLR +G E+ G LI+D YH W +L+ P+K + ++ A+S+ LESVRKDVECF+GILKGRFRILKL + + + +DN+ + CCILHNMLH+FDGL + + DWTG G DAW H+ T Y G+KG G R E +KR+L+ + +R + N++ WL
Sbjct: 41 ATNDKTIIRYDSGVNNIRTESQYTEREYKLRKVNGTERTRRGCFLIMDNWYHEWVTLIAPSKYPQSNKDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFDENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLLPKEGEEEECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWL 253
BLAST of mRNA_H-paniculata_contig16353.3636.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 186 bits (472), Expect = 3.280e-53 Identity = 87/200 (43.50%), Postives = 121/200 (60.50%), Query Frame = 1
Query: 10 AVNDKSIVRFDKTVQAVREGEAYRSTAYKLRDKDGVEQVEMGLNLIVDGEYHRWRSLVCPAKEAATREELAWSKRLESVRKDVECFYGILKGRFRILKLPILFRESAQVDNVVWICCILHNMLHSFDGLKFHEPDMDWTGPDGFLDAWLHEDRTIYFGTKGRSSNGPPERVEVEEGFLAMKRRLVTHYTYRVENNEVAWL 609
+ NDKSI+R+D V +RE Y + + + DG G L+VD YH+W +L+ P+K + +LA+SKRLESVRKDVECF+GI+KGRFRILKL I + + +DNV + CCILHNMLHS+D E + +W G G +AW H + S+ E VEVE GF +++L+ + YR N++AWL
Sbjct: 282 STNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWL 481
BLAST of mRNA_H-paniculata_contig16353.3636.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 181 bits (458), Expect = 7.440e-52 Identity = 94/201 (46.77%), Postives = 124/201 (61.69%), Query Frame = 1
Query: 10 AVNDKSIVRFDKTVQAVREGEAYRSTAYKLRDKDGVEQVEMGLNLIVDGEYHRWRSLVCPAKEAATREELAWSKRLESVRKDVECFYGILKGRFRILKLPILFRESAQVDNVVWICCILHNMLHSFDGLKFHEPDMDWTGPDGFLDAWLHEDRTIYFGTKGRSSNGPPERVEVEEGFLAMKRRLVTHYTYRVENN-EVAWL 609
A NDK+I+R+DK V +R Y YKL +DG + E G L+VD YH+WR+L+ P+K R +L +SKRLES RKDVEC++GILKGRFRI KL I F + +DNV + CCILHNMLHSFD + +W G G +A + T Y S +G E VEVE GF A++ +LVT++ YR E ++ WL
Sbjct: 207 ATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVG--SMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWL 405
BLAST of mRNA_H-paniculata_contig16353.3636.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 181 bits (458), Expect = 5.080e-51 Identity = 94/201 (46.77%), Postives = 124/201 (61.69%), Query Frame = 1
Query: 10 AVNDKSIVRFDKTVQAVREGEAYRSTAYKLRDKDGVEQVEMGLNLIVDGEYHRWRSLVCPAKEAATREELAWSKRLESVRKDVECFYGILKGRFRILKLPILFRESAQVDNVVWICCILHNMLHSFDGLKFHEPDMDWTGPDGFLDAWLHEDRTIYFGTKGRSSNGPPERVEVEEGFLAMKRRLVTHYTYRVENN-EVAWL 609
A NDK+I+R+DK V +R Y YKL +DG + E G L+VD YH+WR+L+ P+K R +L +SKRLES RKDVEC++GILKGRFRI KL I F + +DNV + CCILHNMLHSFD + +W G G +A + T Y S +G E VEVE GF A++ +LVT++ YR E ++ WL
Sbjct: 298 ATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVG--SMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWL 496
BLAST of mRNA_H-paniculata_contig16353.3636.1 vs. uniprot
Match: A0A6H5K8I3_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I3_9PHAE) HSP 1 Score: 168 bits (426), Expect = 1.100e-46 Identity = 87/212 (41.04%), Postives = 123/212 (58.02%), Query Frame = 1
Query: 10 AVNDKSIVRFDKTVQAVREGEAYRSTAYKLRDKDGVEQVEMGLNLIVDGEYHRWRSLVCPAKEAATREELAWSKRLESVRKDVECFYGILKGRFRILKLPILFRESAQVDNVVWICCILHNMLHSFDGLKFHEPDMDWTGPDGFLD-----------AWLHEDRTIYFGTKGRSSNGPPERVEVEEGFLAMKRRLVTHYTYRVENNEVAWLR 612
A NDK+I++FDK AVR G Y+ Y L+ +DG + E G LIVDG YH W+ L P + + + E + ++LESVRKD EC +G++KGRFRI K+ L+R+ ++DN+ + C ILHNML ++DG++ EPD DW G DG LD A HED VE ++GF A++++LVT++ YR V W R
Sbjct: 258 AQNDKTIIKFDKFAMAVRNG-WYKDVEYTLKGEDGADIKEKGPWLIVDGGYHNWKQLQSPIRAPSNKAESGFKRQLESVRKDSECCFGVVKGRFRICKMQFLYRKKERIDNIFFTCIILHNMLLAYDGIELLEPDCDWAGADGDLDKNIEHPVVRMSAPTHEDAV----------------VECDDGFDALRQKLVTNFAYRWGQGTVGWKR 452
BLAST of mRNA_H-paniculata_contig16353.3636.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 161 bits (407), Expect = 1.180e-44 Identity = 85/213 (39.91%), Postives = 117/213 (54.93%), Query Frame = 1
Query: 10 AVNDKSIVRFDKTVQAVREGEAYRSTAYKLRDKDGVEQVEMGLNLIVDGEYHRWRSLVCPAKEAATREELAWSKRLESVRKDVECFYGILKGRFRILKLPILFRESAQVDNVVWICCILHNMLHSFDGLKFHEPDMDWTGPDGFLDAWLHEDRTIYFGTKGRSSNGPP---ERVEVEEG----------FLAMKRRLVTHYTYRVENNEVAWL 609
A NDK+I+R+D V +R Y YKLR +G +++ G LIVD YH W +L+ P+K E+ A+S+ LESVRKDV CF RILKL + + + VDN+ + CCILHNMLH+FDGL E + DWTG G DAW H+ T Y + PP E+ E EG +KR+L+ + +R + N++ WL
Sbjct: 160 ATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEKAECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWL 364
BLAST of mRNA_H-paniculata_contig16353.3636.1 vs. uniprot
Match: A0A6H5JHC3_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHC3_9PHAE) HSP 1 Score: 162 bits (409), Expect = 2.910e-44 Identity = 86/201 (42.79%), Postives = 121/201 (60.20%), Query Frame = 1
Query: 10 AVNDKSIVRFDKTVQAVREGEAYRSTAYKLRDKDGVEQVEMGLNLIVDGEYHRWRSLVCPAKEAATREELAWSKRLESVRKDVECFYGILKGRFRILKLPILFRESAQVDNVVWICCILHNMLHSFDGLKFHEPDMDWTGPDGFLDAWLHEDRTIYFGTKGRSSNGPPERVEVEEGFLAMKRRLVTHYTYRVENNEVAWLR 612
A+NDK+IV FD+ V+ ++ + + L +DG E E GL LIVDG YH+ CP + T++ELA+ K+LESVRKD+ECF+GILKGRFRILK+P+L+R ++D + CC LHNMLHS+DGL E D +W G DG LD W+ + + N P + E+ F ++ +LVT+ + V W R
Sbjct: 256 AMNDKTIVMFDEYVRRIKT--ECKDVPFTLLGEDGSEFEERGLYLIVDGGYHK-----CPVQFPVTQDELAFRKQLESVRKDIECFFGILKGRFRILKMPLLYRGIHKLDCIFQTCCALHNMLHSYDGLSLLEKDCEWAGADGDLDPWVTTPEA-----ESAADNSPDLHL-FEDDFKDLQGKLVTNLAEMKKRGTVGWRR 443
BLAST of mRNA_H-paniculata_contig16353.3636.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 158 bits (400), Expect = 7.450e-43 Identity = 80/201 (39.80%), Postives = 121/201 (60.20%), Query Frame = 1
Query: 10 AVNDKSIVRFDKTVQAVREGEAYRSTAYKLRDKDGVEQVEMGLNLIVDGEYHRWRSLVCPAKEAATREELAWSKRLESVRKDVECFYGILKGRFRILKLPILFRESAQVDNVVWICCILHNMLHSFDGLKFHEPDMDWTGPDGFLDAWLHEDRTIYFGTKGRSSNGPPERVEVEEGFLAMKRRLVTHYTYRVENN-EVAWL 609
+ NDK+I+ D+ V +R + Y + + KDG + G LIVD YH+WR L+ P+K + +L +SKRLESVRKDVECF+GILK RFRILKL + +++ ++D V + CCILHNMLH+ DG+ E D++W G + H + GTK + ++ +VE +KR+L T++ YR ++ ++ WL
Sbjct: 253 STNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSGHNLDSSSVGTKDLN-----DKPQVEAAHAELKRKLTTNFLYRKKHKKDIVWL 448
BLAST of mRNA_H-paniculata_contig16353.3636.1 vs. uniprot
Match: A0A6H5JP18_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP18_9PHAE) HSP 1 Score: 149 bits (376), Expect = 3.930e-42 Identity = 75/190 (39.47%), Postives = 109/190 (57.37%), Query Frame = 1
Query: 76 YRSTAYKLRDKDGVEQVEMGLNLIVDGEYHRWRSLVCPAKEAATREELAWSKRLESVRKDVECFYGILKGRFRILKLPILFRESAQVDNVVWICCILHNMLHSFDGLKFHEPDMDWTGPDGFLD-----------AWLHEDRTIYFGTKGRSSNGPPERVEVEEGFLAMKRRLVTHYTYRVENNEVAWLR 612
Y+ Y L+ +DG + E LIVDG YH W+ L P + +++ E +S++LESVRKD EC +G++KGRFRI K+ L+R+ ++DN+ + C ILHNML ++DG++ EPD DW G DG LD A HED VE ++GF A++++LVT++ YR V W R
Sbjct: 8 YKDVKYTLKGEDGADIKEKRPWLIVDGGYHNWKQLQSPIRAPSSKAESGFSRQLESVRKDSECCFGVVKGRFRICKMQFLYRKKERIDNIFFTCIILHNMLLAYDGIELLEPDCDWAGADGDLDKNIEHPVVRMSAPTHEDAV----------------VECDDGFDALRQKLVTNFAYRWGQGTVGWKR 181 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16353.3636.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16353.3636.1 >prot_H-paniculata_contig16353.3636.1 ID=prot_H-paniculata_contig16353.3636.1|Name=mRNA_H-paniculata_contig16353.3636.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=204bp MAAAVNDKSIVRFDKTVQAVREGEAYRSTAYKLRDKDGVEQVEMGLNLIVback to top mRNA from alignment at H-paniculata_contig16353:242..1447- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16353.3636.1 ID=mRNA_H-paniculata_contig16353.3636.1|Name=mRNA_H-paniculata_contig16353.3636.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1206bp|location=Sequence derived from alignment at H-paniculata_contig16353:242..1447- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16353:242..1447- >mRNA_H-paniculata_contig16353.3636.1 ID=mRNA_H-paniculata_contig16353.3636.1|Name=mRNA_H-paniculata_contig16353.3636.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1224bp|location=Sequence derived from alignment at H-paniculata_contig16353:242..1447- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |