mRNA_H-paniculata_contig16348.3633.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig16348.3633.1 vs. uniprot
Match: D8LKI4_ECTSI (GPN-loop GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKI4_ECTSI) HSP 1 Score: 249 bits (636), Expect = 2.720e-79 Identity = 130/145 (89.66%), Postives = 138/145 (95.17%), Query Frame = 1
Query: 7 FLKTLVYVVDTPRTANPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMADFEKLQEALDSSGDDSYMNSLNRSLSLVLDEFYNALTAVGVSAASGDGMPELFKAFDDAALEFDRDYRPDLERRVAEAKTRQEAAKQ 441
F TLVYVVDTPRTANPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWM+DFEKLQEALD+SGD+SYMNSLNRSL+LVLDEFYNALTAVGVSAASGDGMP LFKA D+AALEF+RDY PDL+RR+ EAK RQEAAKQ
Sbjct: 180 FPTTLVYVVDTPRTANPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMSDFEKLQEALDTSGDESYMNSLNRSLALVLDEFYNALTAVGVSAASGDGMPALFKALDNAALEFERDYLPDLQRRIKEAKARQEAAKQ 324
BLAST of mRNA_H-paniculata_contig16348.3633.1 vs. uniprot
Match: A0A835YZW9_9STRA (GPN-loop GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZW9_9STRA) HSP 1 Score: 188 bits (477), Expect = 3.190e-56 Identity = 94/141 (66.67%), Postives = 116/141 (82.27%), Query Frame = 1
Query: 19 LVYVVDTPRTANPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMADFEKLQEALDSSGDDSYMNSLNRSLSLVLDEFYNALTAVGVSAASGDGMPELFKAFDDAALEFDRDYRPDLERRVAEAKTRQEAAKQ 441
L+YV+DTPRT +PTTFMSNMLYACS+LY++RLP+VLA NKSD+ SP FA EWM+DFEK QEALD + D+SYM SLNRSLSLVLDEFY+ L VGVSAA+G+G+ +LF++ D A EF RDY PDL+ R+A R +AAK+
Sbjct: 176 LIYVIDTPRTTSPTTFMSNMLYACSILYRTRLPMVLAFNKSDVTSPDFAAEWMSDFEKFQEALDETADESYMGSLNRSLSLVLDEFYSTLKHVGVSAATGEGIDQLFQSLDAAGDEFIRDYLPDLQARMAAVAARTQAAKE 316
BLAST of mRNA_H-paniculata_contig16348.3633.1 vs. uniprot
Match: M4C5B9_HYAAE (GPN-loop GTPase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C5B9_HYAAE) HSP 1 Score: 174 bits (442), Expect = 3.600e-51 Identity = 89/141 (63.12%), Postives = 109/141 (77.30%), Query Frame = 1
Query: 1 ATFLKTLVYVVDTPRTANPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMADFEKLQEALDSSGDDSYMNSLNRSLSLVLDEFYNALTAVGVSAASGDGMPELFKAFDDAALEFDRDYRPDLERRVAEAKTR 423
+TF +VYVVDTPRTA+P TFMSNMLYACS+LYK +LP V+ NK D+L FA EWM DFE Q+ALD DDSYM SL+RSLSLVL+EFYN LT+VGVSAA+G+GMPE F A D AA +++ +Y PDL RV + +T+
Sbjct: 157 STFPSVIVYVVDTPRTASPNTFMSNMLYACSILYKLKLPFVVVFNKIDVLRHDFATEWMTDFEAFQKALDDVQDDSYMGSLSRSLSLVLEEFYNNLTSVGVSAATGEGMPEFFAAVDQAAKQYENEYLPDLLARVKKQQTK 297
BLAST of mRNA_H-paniculata_contig16348.3633.1 vs. uniprot
Match: H3G7P8_PHYRM (GPN-loop GTPase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G7P8_PHYRM) HSP 1 Score: 167 bits (423), Expect = 9.070e-51 Identity = 83/127 (65.35%), Postives = 101/127 (79.53%), Query Frame = 1
Query: 1 ATFLKTLVYVVDTPRTANPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMADFEKLQEALDSSGDDSYMNSLNRSLSLVLDEFYNALTAVGVSAASGDGMPELFKAFDDAALEFDRDY 381
+TF +VYVVDTPR+A+P TFMSNMLYACS+LYK +LP V+ NK D+L FA EWM DFE Q ALD DDSYM SL+RSLSLVL+EFYN LT+VGVSAA+G+GMPE F A D+AA +++R+Y
Sbjct: 11 STFPSVIVYVVDTPRSASPNTFMSNMLYACSILYKLKLPFVVVFNKIDVLRHDFATEWMTDFESFQTALDEVQDDSYMGSLSRSLSLVLEEFYNNLTSVGVSAATGEGMPEFFAAVDEAAKQYEREY 137
BLAST of mRNA_H-paniculata_contig16348.3633.1 vs. uniprot
Match: D0NWP2_PHYIT (GPN-loop GTPase n=12 Tax=Phytophthora TaxID=4783 RepID=D0NWP2_PHYIT) HSP 1 Score: 174 bits (440), Expect = 9.990e-51 Identity = 87/135 (64.44%), Postives = 106/135 (78.52%), Query Frame = 1
Query: 1 ATFLKTLVYVVDTPRTANPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMADFEKLQEALDSSGDDSYMNSLNRSLSLVLDEFYNALTAVGVSAASGDGMPELFKAFDDAALEFDRDYRPDLERRV 405
+TF +VYVVDTPRTA+P TFMSNMLYACS+LYK +LP V+ NK D++ FA EWM DFE Q ALD DDSYM SL+RSLSLVL+EFYN LT+VGVSAA+G+GMPELF A D+AA +++ +Y PDL R+
Sbjct: 164 STFPSVIVYVVDTPRTASPNTFMSNMLYACSILYKLKLPFVVVFNKIDVMRHDFATEWMTDFEAFQTALDEVQDDSYMGSLSRSLSLVLEEFYNNLTSVGVSAATGEGMPELFAAVDEAAKQYENEYLPDLLERI 298
BLAST of mRNA_H-paniculata_contig16348.3633.1 vs. uniprot
Match: A0A5D6XLJ6_9STRA (GPN-loop GTPase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLJ6_9STRA) HSP 1 Score: 172 bits (437), Expect = 2.810e-50 Identity = 91/141 (64.54%), Postives = 108/141 (76.60%), Query Frame = 1
Query: 1 ATFLKTLVYVVDTPRTANPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMADFEKLQEALDSSGDDSYMNSLNRSLSLVLDEFYNALTAVGVSAASGDGMPELFKAFDDAALEFDRDYRPDLERRVAEAKTR 423
+TF +VYVVDTPRTA+P TFMSNMLYACS+LYK RLP V+A NK D+L FA EWM DFE Q ALD + D+SYM SL+RSLSLVL+EFYN L +VGVSAA+G+GM ELF A D AA +++ +Y PDL RV E TR
Sbjct: 167 STFPSVIVYVVDTPRTASPNTFMSNMLYACSILYKLRLPFVVAFNKIDVLRHDFAQEWMTDFEAFQAALDQAQDESYMGSLSRSLSLVLEEFYNNLRSVGVSAATGEGMAELFAAVDAAAQQYEAEYLPDLLARVREQHTR 307
BLAST of mRNA_H-paniculata_contig16348.3633.1 vs. uniprot
Match: A0A0P1ATF5_PLAHL (GPN-loop GTPase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ATF5_PLAHL) HSP 1 Score: 172 bits (435), Expect = 5.470e-50 Identity = 88/143 (61.54%), Postives = 111/143 (77.62%), Query Frame = 1
Query: 1 ATFLKTLVYVVDTPRTANPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMADFEKLQEALDSSGDDSYMNSLNRSLSLVLDEFYNALTAVGVSAASGDGMPELFKAFDDAALEFDRDYRPDLERRVAEA-KTRQ 426
+TF +VYVVDTPRTA+P TFMSNMLYACS+LYK +LP V+ NK D++ FA+EWM DFE Q ALD DDSYM +L+RSLSLVL+EFYN LT+VGVSAA+G+GMPE F A D+AA +++ +Y PDL R+ + KT+Q
Sbjct: 162 STFPSVIVYVVDTPRTASPNTFMSNMLYACSILYKLKLPFVVVFNKIDVMRHDFAVEWMTDFEAFQTALDEVQDDSYMGNLSRSLSLVLEEFYNNLTSVGVSAATGEGMPEFFAAIDEAAKQYENEYLPDLLGRIKQQQKTKQ 304
BLAST of mRNA_H-paniculata_contig16348.3633.1 vs. uniprot
Match: K3WNA5_GLOUD (GPN-loop GTPase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WNA5_GLOUD) HSP 1 Score: 172 bits (435), Expect = 7.000e-50 Identity = 88/143 (61.54%), Postives = 110/143 (76.92%), Query Frame = 1
Query: 1 ATFLKTLVYVVDTPRTANPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMADFEKLQEALDSSGDDSYMNSLNRSLSLVLDEFYNALTAVGVSAASGDGMPELFKAFDDAALEFDRDYRPDLERRVAEAKTRQE 429
+TF +VYVVDTPRTA+P TFMSNMLYACS+LYK RLP V+A NK D+L FA EWM DFE Q ALD DDSYM +L+RSLSLVL+EFYN L++VGVSAA+G+GM + F A DDAA ++++Y PDL R+ E + ++E
Sbjct: 166 STFPSVIVYVVDTPRTASPNTFMSNMLYACSILYKLRLPFVIAFNKIDVLRHDFAQEWMTDFEAFQTALDQVQDDSYMGNLSRSLSLVLEEFYNNLSSVGVSAATGEGMDKFFLAIDDAAKRYEQEYLPDLIERIREQQAQRE 308
BLAST of mRNA_H-paniculata_contig16348.3633.1 vs. uniprot
Match: W7U6Q0_9STRA (GPN-loop GTPase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6Q0_9STRA) HSP 1 Score: 172 bits (437), Expect = 7.370e-50 Identity = 91/139 (65.47%), Postives = 110/139 (79.14%), Query Frame = 1
Query: 1 ATFLKTLVYVVDTPRTANPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMADFEKLQEALDSSGDD-SYMNSLNRSLSLVLDEFYNALTAVGVSAASGDGMPELFKAFDDAALEFDRDYRPDLERRVAEA 414
++F LVYVVDTPRT++PTTFMSNMLYACS+LYK+RLP+VL NK+DILS FA++WM DFEK QE LD G+D YM++L RS+SLVLDEFY L VGVSAASGDG+ F+A D+AA EF RDY PD+ R AE+
Sbjct: 189 SSFPTLLVYVVDTPRTSSPTTFMSNMLYACSILYKTRLPIVLTFNKTDILSHTFAVDWMEDFEKFQEGLDRQGEDMGYMSTLIRSMSLVLDEFYKTLRKVGVSAASGDGIDVFFRAVDEAAEEFARDYLPDMLARKAES 327
BLAST of mRNA_H-paniculata_contig16348.3633.1 vs. uniprot
Match: A0A421F4K2_9STRA (GPN-loop GTPase n=5 Tax=Phytophthora TaxID=4783 RepID=A0A421F4K2_9STRA) HSP 1 Score: 171 bits (434), Expect = 8.960e-50 Identity = 86/143 (60.14%), Postives = 110/143 (76.92%), Query Frame = 1
Query: 1 ATFLKTLVYVVDTPRTANPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMADFEKLQEALDSSGDDSYMNSLNRSLSLVLDEFYNALTAVGVSAASGDGMPELFKAFDDAALEFDRDYRPDLERRVAEAKTRQE 429
+TF +VYVVDTPRTA+P TFMSNMLYACS+LYK +LP V+A NK D++ FA EWM DFE Q ALD DDSYM SL+RSLSLVL+EFYN L++VGVSAA+G+GM E F A D+AA +++ +Y PDL R+ + + +Q+
Sbjct: 166 STFPSVIVYVVDTPRTASPNTFMSNMLYACSILYKLKLPFVVAFNKIDVMRHDFATEWMTDFESFQTALDQVQDDSYMGSLSRSLSLVLEEFYNNLSSVGVSAATGEGMAEFFAAIDEAAKQYEEEYLPDLLERIKQKQKKQD 308 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16348.3633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16348.3633.1 >prot_H-paniculata_contig16348.3633.1 ID=prot_H-paniculata_contig16348.3633.1|Name=mRNA_H-paniculata_contig16348.3633.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=147bp ATFLKTLVYVVDTPRTANPTTFMSNMLYACSVLYKSRLPLVLALNKSDILback to top mRNA from alignment at H-paniculata_contig16348:3262..5675- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16348.3633.1 ID=mRNA_H-paniculata_contig16348.3633.1|Name=mRNA_H-paniculata_contig16348.3633.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2414bp|location=Sequence derived from alignment at H-paniculata_contig16348:3262..5675- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16348:3262..5675- >mRNA_H-paniculata_contig16348.3633.1 ID=mRNA_H-paniculata_contig16348.3633.1|Name=mRNA_H-paniculata_contig16348.3633.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=882bp|location=Sequence derived from alignment at H-paniculata_contig16348:3262..5675- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |