mRNA_H-paniculata_contig1630.3613.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig1630.3613.1
Unique Name	mRNA_H-paniculata_contig1630.3613.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig1630.3613.1 vs. uniprot
Match: D8LJ06_ECTSI (CCT-beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ06_ECTSI)

HSP 1 Score: 950 bits (2456), Expect = 0.000e+0
Identity = 494/526 (93.92%), Postives = 516/526 (98.10%), Query Frame = 1

Query:  133 MATEAVLNDKAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSVGSRDGGISVTNDGATILRAIHVDNAAAKVLVNIAKTQDDEVGDGTTSVTVLCGELLREAEQLVNQRLHPQTIIQGWRLATACARKVLAEAAEDNGKDDVKFKEDLTNIAKTTLSSKLLTHEKDRFSALAVDAVLRLRGSGNLDYIQIIKKPGGSLKESYLEEGFILDKKIGIGQPKVMENAKILIANTAMDTDKIKIYGSRVRVDSMNKVAEIEEAEKDKMRNKCKKIIDHGVNVFVNRQLIYNFPEQIFAEAGVMAIEHADFEGVERLAAVTGGATASTFDHPELAVLGECAKIEEVMIGEDTLIRFSGCKAGEACTIVLRGASKHVLDEAERSLHDALCVLTQTVKETRTVPGGGCTEIAMAAAIDAEVPNTAGKKALAMEAYARALRQLPTIIADNGGFDGSELISSLRAAHAKGNKTAGLDMNEGVVGDMKALGVREAFKSKLQVLVSAAEAAEMVLRVDDIIKCAPRQRQQ 1710
            MATEAVLND AQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQS+GSRDGGISVTNDGATILRAIHVDNAAAKVLVNIAKTQDDEVGDGTTSVTVLCGELLREAE+LVNQRLHPQTIIQGWRLATA AR+VLA++AEDNGKDD KF++DL +IAKTTLSSKLLTHEKDRF+ LAV+AVLRL+GSGNLDYIQIIK PGGSLKESYLEEGFIL+KKIG+GQPKV+ENAKILIANTAMDTDKIKIYGSRVRVDSMNKVAEIEEAEKDKMR KCKKI+DHGVNVFVNRQLIYNFPEQIFAEAGVMAIEHADFEGVERLAAVTGGATASTFDHPELAVLGEC KIEEVMIGEDTLIRFSGCKAGEACTIVLRGASKHVLDEAERSLHDALCVLTQTVKETRTVPGGGCTEIAMAAAIDAEVPNT+GKKALAMEAYARALRQLPTIIADNGG+DGS+LISSLRAAHA+G KTAGLDM +GVVGDMKALGVREA+KSKLQVL+SAAEAAEMVLRVDDIIKCAPRQRQQ
Sbjct:    1 MATEAVLNDNAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSMGSRDGGISVTNDGATILRAIHVDNAAAKVLVNIAKTQDDEVGDGTTSVTVLCGELLREAEKLVNQRLHPQTIIQGWRLATAAARRVLADSAEDNGKDDAKFRDDLYHIAKTTLSSKLLTHEKDRFAELAVNAVLRLKGSGNLDYIQIIKMPGGSLKESYLEEGFILNKKIGVGQPKVVENAKILIANTAMDTDKIKIYGSRVRVDSMNKVAEIEEAEKDKMRKKCKKIVDHGVNVFVNRQLIYNFPEQIFAEAGVMAIEHADFEGVERLAAVTGGATASTFDHPELAVLGECKKIEEVMIGEDTLIRFSGCKAGEACTIVLRGASKHVLDEAERSLHDALCVLTQTVKETRTVPGGGCTEIAMAAAIDAEVPNTSGKKALAMEAYARALRQLPTIIADNGGYDGSDLISSLRAAHAQGAKTAGLDMQQGVVGDMKALGVREAYKSKLQVLISAAEAAEMVLRVDDIIKCAPRQRQQ 526

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BLAST of mRNA_H-paniculata_contig1630.3613.1 vs. uniprot
Match: A0A836CDN2_9STRA (CCT-beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDN2_9STRA)

HSP 1 Score: 877 bits (2265), Expect = 2.360e-314
Identity = 455/524 (86.83%), Postives = 489/524 (93.32%), Query Frame = 1

Query:  133 MATEAVLNDKAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSVGSRDGGISVTNDGATILRAIHVDNAAAKVLVNIAKTQDDEVGDGTTSVTVLCGELLREAEQLVNQRLHPQTIIQGWRLATACARKVLAEAAEDNGKDDVKFKEDLTNIAKTTLSSKLLTHEKDRFSALAVDAVLRLRGSGNLDYIQIIKKPGGSLKESYLEEGFILDKKIGIGQPKVMENAKILIANTAMDTDKIKIYGSRVRVDSMNKVAEIEEAEKDKMRNKCKKIIDHGVNVFVNRQLIYNFPEQIFAEAGVMAIEHADFEGVERLAAVTGGATASTFDHPELAVLGECAKIEEVMIGEDTLIRFSGCKAGEACTIVLRGASKHVLDEAERSLHDALCVLTQTVKETRTVPGGGCTEIAMAAAIDAEVPNTAGKKALAMEAYARALRQLPTIIADNGGFDGSELISSLRAAHAKGNKTAGLDMNEGVVGDMKALGVREAFKSKLQVLVSAAEAAEMVLRVDDIIKCAPRQR 1704
            MATEAVLN++AQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQS+GSRDG +SVTNDGATILRAIHVDNAAAKVLV+IAKTQDDEVGDGTTSVTVLCGELLREAEQLVN RLHPQTIIQGWRLATA ARKVL EAAEDN  D   F+ DL NIA+TTLSSKL+THEK  F+ LAVDAVLRL+GSGNLDYIQIIKKPGGSL+ESYLEEGFILDKKIG+GQP+ +ENAKIL+ANT+MDTDKIKIYGSRVRVDSM KVAEIEEAE++KMR KCK IIDHGVNVFVNRQLIYNFPEQIFAEAGVMAIEHADFEGVERLAAVTG A ASTF+HPELAVLGEC  IEEVMIGED+LIRFSGCKAGEACTIVLRGAS+HVLDEAERSLHDALCVLTQT+KETRTVPGGGC E+AMA AIDAEVP+TAGK+ALAMEAYARALRQLPTIIADNGG+D SEL++ LRAAHA G  TAGLDM +G + DM  LGVRE++KSKLQVLVSAAEAAEM+LRVDDII+ APRQR
Sbjct:    1 MATEAVLNEQAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSMGSRDGSVSVTNDGATILRAIHVDNAAAKVLVDIAKTQDDEVGDGTTSVTVLCGELLREAEQLVNARLHPQTIIQGWRLATAIARKVLVEAAEDNAADAAAFRADLMNIARTTLSSKLVTHEKHHFAELAVDAVLRLKGSGNLDYIQIIKKPGGSLRESYLEEGFILDKKIGVGQPRRIENAKILVANTSMDTDKIKIYGSRVRVDSMAKVAEIEEAEREKMRKKCKNIIDHGVNVFVNRQLIYNFPEQIFAEAGVMAIEHADFEGVERLAAVTGAAIASTFEHPELAVLGECKVIEEVMIGEDSLIRFSGCKAGEACTIVLRGASEHVLDEAERSLHDALCVLTQTIKETRTVPGGGCMEVAMAQAIDAEVPSTAGKRALAMEAYARALRQLPTIIADNGGYDSSELVTQLRAAHAAGQTTAGLDMYQGKIADMNDLGVRESYKSKLQVLVSAAEAAEMILRVDDIIRAAPRQR 524

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BLAST of mRNA_H-paniculata_contig1630.3613.1 vs. uniprot
Match: A0A7S2R4B7_9STRA (CCT-beta n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R4B7_9STRA)

HSP 1 Score: 790 bits (2040), Expect = 6.280e-280
Identity = 403/525 (76.76%), Postives = 462/525 (88.00%), Query Frame = 1

Query:  133 MATEAVLNDKAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSVGSRDGGISVTNDGATILRAIHVDNAAAKVLVNIAKTQDDEVGDGTTSVTVLCGELLREAEQLVNQRLHPQTIIQGWRLATACARKVLAEAAEDNGKDDVKFKEDLTNIAKTTLSSKLLTHEKDRFSALAVDAVLRLRGSGNLDYIQIIKKPGGSLKESYLEEGFILDKKIGIGQPKVMENAKILIANTAMDTDKIKIYGSRVRVDSMNKVAEIEEAEKDKMRNKCKKIIDHGVNVFVNRQLIYNFPEQIFAEAGVMAIEHADFEGVERLAAVTGGATASTFDHPELAVLGECAKIEEVMIGEDTLIRFSGCKAGEACTIVLRGASKHVLDEAERSLHDALCVLTQTVKETRTVPGGGCTEIAMAAAIDAEVPNTAGKKALAMEAYARALRQLPTIIADNGGFDGSELISSLRAAHAKGNKTAGLDMNEGVVGDMKALGVREAFKSKLQVLVSAAEAAEMVLRVDDIIKCAPRQRQ 1707
            M+ EAVLN +AQVDKG+NAR+SSFVGAIA+ADLVK+TLGPKGMDKIL SV S DGGI++TNDGATIL++I+VDNAAAKVLV+IAK QDDEVGDGTTSVTVLCGELLREAE+L+NQR+HPQT+I+GWR A   ARK L   A DN  D+  F++DL NIAKTTLSSKL+ HEKD F+ LAVDAV+RLRGSGNLD+IQIIKKPGGSL++SYL +GFILDKKIG GQPK +ENA+IL+ANTAMDTDKIKIYGSRVRVDSM KVA+IEEAE+DKMR K  KII HG+N F+NRQLIYNF E+IFA AGV AIEHADF+G+ERLAAVTGG   STFDHPE+  LGECA IEE+MIGED+LI+FSGC +G ACTIVLRGAS HVLDEAERSLHDALCVL++TV  T+T+PGGGC E+AMA AIDAEVP  AGK ALAMEA++RALR LPT IADNGG D SEL++ LRAAH++GN T GLDM  GVV DM ALGVRE++KSKLQV+ SAAEAAEM+LRVDDI+KCAPRQR+
Sbjct:   16 MSAEAVLNAEAQVDKGENARMSSFVGAIAVADLVKSTLGPKGMDKILSSVSSPDGGITITNDGATILKSIYVDNAAAKVLVDIAKVQDDEVGDGTTSVTVLCGELLREAEKLINQRIHPQTVIEGWRKAANIARKTLEGMAVDNSSDEAAFRQDLMNIAKTTLSSKLVHHEKDHFATLAVDAVMRLRGSGNLDHIQIIKKPGGSLRDSYLADGFILDKKIGTGQPKRIENARILLANTAMDTDKIKIYGSRVRVDSMAKVADIEEAERDKMRTKVNKIISHGINCFINRQLIYNFSEEIFASAGVCAIEHADFDGIERLAAVTGGEICSTFDHPEMVKLGECALIEEIMIGEDSLIQFSGCASGAACTIVLRGASNHVLDEAERSLHDALCVLSRTVTITKTIPGGGCAEMAMARAIDAEVPKVAGKSALAMEAFSRALRALPTTIADNGGDDSSELVTQLRAAHSEGNSTFGLDMYTGVVADMLALGVRESYKSKLQVVSSAAEAAEMILRVDDIVKCAPRQRE 540

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BLAST of mRNA_H-paniculata_contig1630.3613.1 vs. uniprot
Match: A0A6V1SR55_HETAK (CCT-beta n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SR55_HETAK)

HSP 1 Score: 786 bits (2031), Expect = 7.780e-279
Identity = 393/525 (74.86%), Postives = 457/525 (87.05%), Query Frame = 1

Query:  133 MATEAVLNDKAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSVGSRDGGISVTNDGATILRAIHVDNAAAKVLVNIAKTQDDEVGDGTTSVTVLCGELLREAEQLVNQRLHPQTIIQGWRLATACARKVLAEAAEDNGKDDVKFKEDLTNIAKTTLSSKLLTHEKDRFSALAVDAVLRLRGSGNLDYIQIIKKPGGSLKESYLEEGFILDKKIGIGQPKVMENAKILIANTAMDTDKIKIYGSRVRVDSMNKVAEIEEAEKDKMRNKCKKIIDHGVNVFVNRQLIYNFPEQIFAEAGVMAIEHADFEGVERLAAVTGGATASTFDHPELAVLGECAKIEEVMIGEDTLIRFSGCKAGEACTIVLRGASKHVLDEAERSLHDALCVLTQTVKETRTVPGGGCTEIAMAAAIDAEVPNTAGKKALAMEAYARALRQLPTIIADNGGFDGSELISSLRAAHAKGNKTAGLDMNEGVVGDMKALGVREAFKSKLQVLVSAAEAAEMVLRVDDIIKCAPRQRQ 1707
            MATEAVLND+A V+KGDNAR+ SFVGAIAI D+VKTTLGPKGMDKIL SV + D  ISVTNDGATIL+++HVDNAAAKVL++IAKTQDDEVGDGTTSV VLCGELLREAE L+N R+HPQT+I GWR A   AR VL   A DN  D  +F+ DL  IAKTTLSSK+LTH+KD F+ LAVDAVLRL+GSG L+YIQ+IKKPGGSL++SYLE GF+LDK+IG+GQPK +ENA++L+ANT+MD DKIKIYGSRVRVDS+ KVA IEEAE+DKMR KC+KIIDHGVNVF+NRQLIYNFPEQIF +AG+++IEHADFEG+ERLA V G   ASTFDHPEL  +GECA ++E++IGED L+RFSGC+  EACT+VLRGAS HVLDEAERSLHDALCVLTQTVK+ R VPGGGC E+AMAAA+DA VP  AGK+ LAMEAYARALRQLPTIIADN G+D SE+++ LRAAHA G  TAGLDM  G +GDM ALG+RE++KSKLQV+ SA+EAAEM+LRVDDIIKCAPRQR+
Sbjct:    1 MATEAVLNDQASVEKGDNARMMSFVGAIAICDMVKTTLGPKGMDKILVSVSAHDKSISVTNDGATILKSVHVDNAAAKVLIDIAKTQDDEVGDGTTSVAVLCGELLREAEALINARIHPQTVIHGWRKAAQIARGVLESLAWDNAGDPERFRADLLAIAKTTLSSKILTHDKDHFAELAVDAVLRLKGSGQLEYIQVIKKPGGSLRDSYLENGFVLDKRIGVGQPKRVENARVLVANTSMDADKIKIYGSRVRVDSIQKVAAIEEAERDKMRRKCQKIIDHGVNVFINRQLIYNFPEQIFTDAGMVSIEHADFEGIERLAKVLGAEIASTFDHPELVRVGECALVDEILIGEDRLLRFSGCRDAEACTVVLRGASPHVLDEAERSLHDALCVLTQTVKDARCVPGGGCCEVAMAAAVDAAVPQVAGKQQLAMEAYARALRQLPTIIADNAGYDSSEMVTQLRAAHAAGRSTAGLDMRAGEIGDMNALGIRESYKSKLQVVASASEAAEMILRVDDIIKCAPRQRE 525

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BLAST of mRNA_H-paniculata_contig1630.3613.1 vs. uniprot
Match: I2CP43_NANGC (CCT-beta n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP43_NANGC)

HSP 1 Score: 779 bits (2012), Expect = 5.940e-276
Identity = 398/525 (75.81%), Postives = 459/525 (87.43%), Query Frame = 1

Query:  133 MATEAVLNDKAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSVGSRDGGISVTNDGATILRAIHVDNAAAKVLVNIAKTQDDEVGDGTTSVTVLCGELLREAEQLV-NQRLHPQTIIQGWRLATACARKVLAEAAEDNGKDDVKFKEDLTNIAKTTLSSKLLTHEKDRFSALAVDAVLRLRGSGNLDYIQIIKKPGGSLKESYLEEGFILDKKIGIGQPKVMENAKILIANTAMDTDKIKIYGSRVRVDSMNKVAEIEEAEKDKMRNKCKKIIDHGVNVFVNRQLIYNFPEQIFAEAGVMAIEHADFEGVERLAAVTGGATASTFDHPELAVLGECAKIEEVMIGEDTLIRFSGCKAGEACTIVLRGASKHVLDEAERSLHDALCVLTQTVKETRTVPGGGCTEIAMAAAIDAEVPNTAGKKALAMEAYARALRQLPTIIADNGGFDGSELISSLRAAHAKGNKTAGLDMNEGVVGDMKALGVREAFKSKLQVLVSAAEAAEMVLRVDDIIKCAPRQR 1704
            M+   VLN  A+VDKG+NAR+SSF+GAIAIADLVKTTLGPKGMDKILQSVGS +G I+VTNDGATIL+++H+DN AAKVLV+IAKTQDDEVGDGTTSV VLCGELLREAE L+ NQRLHPQT+ QGWR AT  ARK L   AED+  D V F++DL NIA TTLSSKLL+ EK  F+ LAVDAVLRL+GS NLD+IQIIKKPGG+LK+S+L EGF+LDKKIG+GQPK ME AKILIANT+MDTDKIKI+GSRVRVDS+ KVAEIEEAEK+KMR KCKKI+DHG+N  +NRQLIYNFPEQIF EAG+M+IEHADFEGVERLAAVTGG  ASTF+HPEL  LGEC+ IEE++IGED L+ FSGCK G ACT+VLRGAS H+LDEAERSLHDALCVL+QTVKETRT+PGGGC E+AMA A+DA+V  T GKKA+AME++ARALRQLPTIIADNGG+D SEL++ LRAAH  G  T GLDM  G + DM++LG+ EAFKSKLQVL+SAAEAAEM++RVDDIIK APR+R
Sbjct:    1 MSYAGVLNAGAEVDKGENARMSSFIGAIAIADLVKTTLGPKGMDKILQSVGSSEGAITVTNDGATILKSVHIDNPAAKVLVDIAKTQDDEVGDGTTSVAVLCGELLREAESLLSNQRLHPQTVAQGWREATILARKALEGLAEDHADDPVAFRQDLINIATTTLSSKLLSQEKAHFAKLAVDAVLRLKGSANLDHIQIIKKPGGALKDSFLAEGFLLDKKIGVGQPKRMEKAKILIANTSMDTDKIKIFGSRVRVDSLQKVAEIEEAEKEKMRVKCKKILDHGINCLINRQLIYNFPEQIFTEAGIMSIEHADFEGVERLAAVTGGEIASTFEHPELVALGECSLIEEILIGEDKLLCFSGCKNGAACTLVLRGASSHLLDEAERSLHDALCVLSQTVKETRTIPGGGCAEVAMAQAVDAQVAATPGKKAIAMESFARALRQLPTIIADNGGYDSSELLTQLRAAHMAGKTTYGLDMAHGGIADMRSLGITEAFKSKLQVLISAAEAAEMIIRVDDIIKSAPRER 525

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BLAST of mRNA_H-paniculata_contig1630.3613.1 vs. uniprot
Match: A0A7S2RXR6_9STRA (CCT-beta n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RXR6_9STRA)

HSP 1 Score: 771 bits (1992), Expect = 6.680e-273
Identity = 391/523 (74.76%), Postives = 448/523 (85.66%), Query Frame = 1

Query:  142 EAVLNDKAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSVGSRDGGISVTNDGATILRAIHVDNAAAKVLVNIAKTQDDEVGDGTTSVTVLCGELLREAEQLVNQRLHPQTIIQGWRLATACARKVLAEAAEDNGKDDVKFKEDLTNIAKTTLSSKLLTHEKDRFSALAVDAVLRLRGSGNLDYIQIIKKPGGSLKESYLEEGFILDKKIGIGQPKVMENAKILIANTAMDTDKIKIYGSRVRVDSMNKVAEIEEAEKDKMRNKCKKIIDHGVNVFVNRQLIYNFPEQIFAEAGVMAIEHADFEGVERLAAVTGGATASTFDHPELAVLGECAKIEEVMIGEDTLIRFSGCKAGEACTIVLRGASKHVLDEAERSLHDALCVLTQTVKETRTVPGGGCTEIAMAAAIDAEVPNTAGKKALAMEAYARALRQLPTIIADNGGFDGSELISSLRAAHAKGNKTAGLDMNEGVVGDMKALGVREAFKSKLQVLVSAAEAAEMVLRVDDIIKCAPRQRQQ 1710
            +A L+    VDKG+NARLSSFVGAIAIAD+VKTTLGPKGMDKILQ +   D GISVTNDGATILR++ +DNAAAKVLV+IA+ QDDEVGDGTTSV VLCGELLREAEQLVNQR+HPQTI+ GWR+A   ARK L EAA DN  ++ KF++DL  IA+TTLSSKLLTHEKD F+ LAVDAV+RL+GS NLD+IQI+KK GG L++SYLEEGF+LDK +G+GQP+ +ENAKIL+ANT+MDTDK+KIYGSRV+VDSMNKVAEIEEAEKDKMRNKC+KII HG NVF+NRQLIYN PE IFAE G+MAIEHADF+G+ERLAAVTGG  ASTFDHPEL  LGEC  IEE+MIGED +IR  GCK+G ACTIVLRGAS HVLDEAERSLHDALC+L  TV++ RTV GGGCTE  MA  ID E  NT GKKA+AMEA+ARALRQLP I+ADNGG+D +EL+S LRAAHA G  T GLDM  G + DM  LGV E+FKSKL VL+SA+EAAEM+LRVDDIIKCAPRQR+Q
Sbjct:    3 QAFLDQGTSVDKGENARLSSFVGAIAIADMVKTTLGPKGMDKILQKISEHDQGISVTNDGATILRSVMLDNAAAKVLVDIARVQDDEVGDGTTSVAVLCGELLREAEQLVNQRIHPQTIVAGWRIARGVARKALEEAAIDNSDNEEKFRDDLFRIARTTLSSKLLTHEKDYFAKLAVDAVMRLKGSNNLDHIQILKKAGGQLRDSYLEEGFLLDKTVGVGQPRRIENAKILLANTSMDTDKVKIYGSRVKVDSMNKVAEIEEAEKDKMRNKCEKIIAHGCNVFINRQLIYNLPESIFAERGIMAIEHADFDGIERLAAVTGGEVASTFDHPELVTLGECDVIEEIMIGEDKVIRLGGCKSGLACTIVLRGASSHVLDEAERSLHDALCILQATVRDARTVYGGGCTETLMAQVIDREAENTPGKKAIAMEAFARALRQLPAIVADNGGYDSAELVSQLRAAHASGKNTYGLDMYNGAIADMLDLGVLESFKSKLSVLMSASEAAEMILRVDDIIKCAPRQREQ 525

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BLAST of mRNA_H-paniculata_contig1630.3613.1 vs. uniprot
Match: A0A7S2U8E3_9STRA (CCT-beta n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U8E3_9STRA)

HSP 1 Score: 766 bits (1979), Expect = 6.270e-271
Identity = 393/521 (75.43%), Postives = 447/521 (85.80%), Query Frame = 1

Query:  145 AVLNDKAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSVGSRDGGISVTNDGATILRAIHVDNAAAKVLVNIAKTQDDEVGDGTTSVTVLCGELLREAEQLVNQRLHPQTIIQGWRLATACARKVLAEAAEDNGKDDVKFKEDLTNIAKTTLSSKLLTHEKDRFSALAVDAVLRLRGSGNLDYIQIIKKPGGSLKESYLEEGFILDKKIGIGQPKVMENAKILIANTAMDTDKIKIYGSRVRVDSMNKVAEIEEAEKDKMRNKCKKIIDHGVNVFVNRQLIYNFPEQIFAEAGVMAIEHADFEGVERLAAVTGGATASTFDHPELAVLGECAKIEEVMIGEDTLIRFSGCKAGEACTIVLRGASKHVLDEAERSLHDALCVLTQTVKETRTVPGGGCTEIAMAAAIDAEVPNTAGKKALAMEAYARALRQLPTIIADNGGFDGSELISSLRAAHAKGNKTAGLDMNEGVVGDMKALGVREAFKSKLQVLVSAAEAAEMVLRVDDIIKCAPRQRQ 1707
            A +N    VDKG+NARLSSF+GAIAIAD+VKTTLGPKGMDKILQ V   D GISVTNDGATILR+I++DNAAAKVLV+IA+ QDDEVGDGTTSV VLCGELLREAE LV QR+HPQ I QGWRLA A ARK L  AA DN  D+ KF+ DL +IA+TTLSSKL+THEKD F+ LAVDAV+RL+GS NL++IQI+KK GGSL++SYLEEGF+LDK +G+GQP+ +ENAKILIANT+MDTDKIKIYGSRVRVDSMNKVAEIEEAEK KMR KC KII HG NVF+NRQLIYN PE IFAE G+MAIEHADF+GVERLAAVTGG   STFDHPEL  +GEC  IEEVMIGEDT+IR  GCK GEACTIVLRGAS H+LDEAERS+HDALC+LT TV++ RT+ GGGCTEI MA A+D  V  T GKKALAMEA+ARALRQLP+I+ADNGG+D +EL+S LR AHA+G  T GLDM  G + DM  LGV+E+FKSKLQVL+SA+EAAEM+LRVDDIIKCAPRQRQ
Sbjct:    4 AYMNQGTSVDKGENARLSSFIGAIAIADMVKTTLGPKGMDKILQKVSEHDQGISVTNDGATILRSINLDNAAAKVLVDIARVQDDEVGDGTTSVAVLCGELLREAELLVAQRIHPQVIAQGWRLARAEARKALEGAAVDNSSDEEKFRNDLFHIARTTLSSKLVTHEKDYFANLAVDAVMRLKGSNNLEHIQILKKAGGSLRDSYLEEGFLLDKSMGVGQPRRIENAKILIANTSMDTDKIKIYGSRVRVDSMNKVAEIEEAEKGKMRQKCDKIIAHGCNVFINRQLIYNLPESIFAEKGIMAIEHADFDGVERLAAVTGGDVVSTFDHPELVTMGECDVIEEVMIGEDTVIRLGGCKMGEACTIVLRGASSHMLDEAERSIHDALCILTSTVRDPRTIYGGGCTEILMAQAVDKAVDATPGKKALAMEAFARALRQLPSIVADNGGYDSAELVSQLRVAHAEGKNTYGLDMYNGKIADMSELGVQESFKSKLQVLLSASEAAEMILRVDDIIKCAPRQRQ 524

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BLAST of mRNA_H-paniculata_contig1630.3613.1 vs. uniprot
Match: A0A7S2F9V5_9STRA (CCT-beta n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F9V5_9STRA)

HSP 1 Score: 764 bits (1974), Expect = 3.460e-270
Identity = 390/525 (74.29%), Postives = 455/525 (86.67%), Query Frame = 1

Query:  133 MATEAVLNDKAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSVGSRDGGISVTNDGATILRAIHVDNAAAKVLVNIAKTQDDEVGDGTTSVTVLCGELLREAEQLVNQRLHPQTIIQGWRLATACARKVLAEAAEDNGKDDVKFKEDLTNIAKTTLSSKLLTHEKDRFSALAVDAVLRLRGSGNLDYIQIIKKPGGSLKESYLEEGFILDKKIGIGQPKVMENAKILIANTAMDTDKIKIYGSRVRVDSMNKVAEIEEAEKDKMRNKCKKIIDHGVNVFVNRQLIYNFPEQIFAEAGVMAIEHADFEGVERLAAVTGGATASTFDHPELAVLGECAKIEEVMIGEDTLIRFSGCKAGEACTIVLRGASKHVLDEAERSLHDALCVLTQTVKETRTVPGGGCTEIAMAAAIDAEVPNTAGKKALAMEAYARALRQLPTIIADNGGFDGSELISSLRAAHAKGNKTAGLDMNEGVVGDMKALGVREAFKSKLQVLVSAAEAAEMVLRVDDIIKCAPRQRQ 1707
            M+ EAVLN++AQVDKG+NAR++SFVGAIA+ADLVK+TLGPKGMDKIL SV S +G I++TNDGATILR+I VDNAAAKVLV+IA+ QD+EVGDGTTSV VLCGELLREAE L+ QR+HPQTII+GWR +   AR+ L E + DN  DD KF+EDL NIAKTTLSSKL+ HEK  F+ LAV+AVLRL+GSGNLD+IQI+KKPGGSLK+SYL +GFILDKKIG+GQPK +ENA+IL+ANTAMDTDKIKIYGSRVRVDSM KVAEIEEAE+DKMR K +KIIDH VN F+NRQLIYNF E+IFA   VMAIEHADF+G+ERLAAVTGG   STFDHPEL  LGEC  IEE+MIGED LI+FSGC+ G ACT+VLRGAS H+LDEAERSLHDALCVL +TV  T+T+PGGGCTE+AMA AI+  +P+ AGK+A+AME++ +ALR +PTIIADN G+D SEL++SLRAAH  G  TAGLDM  G V DM  LGVRE++KSKLQVL SAAEAAEM+LRVDDIIKCAPRQR+
Sbjct:    1 MSAEAVLNEQAQVDKGENARMASFVGAIAVADLVKSTLGPKGMDKILSSVQSENGQITITNDGATILRSISVDNAAAKVLVDIARVQDEEVGDGTTSVAVLCGELLREAEDLIGQRIHPQTIIEGWRKSAQIAREKLEEMSVDNSADDAKFREDLINIAKTTLSSKLVYHEKQYFAELAVNAVLRLQGSGNLDHIQILKKPGGSLKDSYLADGFILDKKIGVGQPKRVENARILLANTAMDTDKIKIYGSRVRVDSMAKVAEIEEAERDKMRTKVEKIIDHKVNCFINRQLIYNFSEEIFASNNVMAIEHADFDGIERLAAVTGGEICSTFDHPELVSLGECKLIEEIMIGEDRLIQFSGCQGGSACTVVLRGASNHLLDEAERSLHDALCVLARTVAITKTIPGGGCTEMAMAQAIEQVIPSIAGKQAIAMESFTKALRAMPTIIADNAGYDSSELVTSLRAAHTAGQTTAGLDMYNGCVADMLELGVRESYKSKLQVLSSAAEAAEMILRVDDIIKCAPRQRE 525

[Close]

BLAST of mRNA_H-paniculata_contig1630.3613.1 vs. uniprot
Match: A0A6G0XN95_9STRA (CCT-beta n=10 Tax=Saprolegniaceae TaxID=4764 RepID=A0A6G0XN95_9STRA)

HSP 1 Score: 760 bits (1963), Expect = 1.620e-268
Identity = 384/525 (73.14%), Postives = 453/525 (86.29%), Query Frame = 1

Query:  133 MATEAVLNDKAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSVGSRDGGISVTNDGATILRAIHVDNAAAKVLVNIAKTQDDEVGDGTTSVTVLCGELLREAEQLVNQRLHPQTIIQGWRLATACARKVLAEAAEDNGKDDVKFKEDLTNIAKTTLSSKLLTHEKDRFSALAVDAVLRLRGSGNLDYIQIIKKPGGSLKESYLEEGFILDKKIGIGQPKVMENAKILIANTAMDTDKIKIYGSRVRVDSMNKVAEIEEAEKDKMRNKCKKIIDHGVNVFVNRQLIYNFPEQIFAEAGVMAIEHADFEGVERLAAVTGGATASTFDHPELAVLGECAKIEEVMIGEDTLIRFSGCKAGEACTIVLRGASKHVLDEAERSLHDALCVLTQTVKETRTVPGGGCTEIAMAAAIDAEVPNTAGKKALAMEAYARALRQLPTIIADNGGFDGSELISSLRAAHAKGNKTAGLDMNEGVVGDMKALGVREAFKSKLQVLVSAAEAAEMVLRVDDIIKCAPRQRQ 1707
            M    VLN ++QV+KG+NARL+SFVGAIAIAD+VKTTLGPKGMDKILQSVG  D  ISVTNDGATIL+++++DNAAAKVLV+IAKTQDDEVGDGTTSV VLCGELLREAE+L++QR+HPQTII GWR+A + A   L ++A+DN +D  KF++DL NIA+TTLSSKL++  KD F+ LAVDAVLRL+GS NLD+IQIIKK GGSLK+SYL+EGFILDK IG+GQPK + NAKILIANT MDTDKIKIYG+RV+VDSM KVA IEEAEK KMR K +KI D G+N F+NRQLIYN+PEQIF E G+MAIEHADF+G+ERL+AVTGG   STFDHPEL  LGE A IEE+MIGED +IRFSG K G+AC++VLRGAS H+L+EAERSLHDAL VL+QTVK TRTV GGGCTE+ MA AID + P   GKK+LAMEA+ARALRQ+P IIADNGG+D SEL++ LRAAH  G KTAGL+M  G +GDM ALG+RE++KSK+QVL+SAAEAAEM+LRVDDI+KCAPRQRQ
Sbjct:    1 MQHHNVLNPESQVEKGENARLASFVGAIAIADMVKTTLGPKGMDKILQSVGGPDKSISVTNDGATILKSVYIDNAAAKVLVDIAKTQDDEVGDGTTSVAVLCGELLREAEKLIDQRIHPQTIIDGWRIALSTAHMALEDSAKDNSEDPAKFRQDLLNIARTTLSSKLMSESKDHFAELAVDAVLRLKGSNNLDHIQIIKKQGGSLKDSYLDEGFILDKHIGVGQPKRLTNAKILIANTGMDTDKIKIYGARVKVDSMEKVASIEEAEKKKMRKKVEKIADFGINCFINRQLIYNYPEQIFTEKGIMAIEHADFDGIERLSAVTGGEITSTFDHPELVQLGEAALIEEIMIGEDRVIRFSGVKTGQACSVVLRGASSHLLEEAERSLHDALAVLSQTVKHTRTVMGGGCTEVLMAQAIDEKAPGVPGKKSLAMEAFARALRQIPAIIADNGGYDSSELVTQLRAAHFSGQKTAGLNMTNGSIGDMDALGIRESYKSKMQVLLSAAEAAEMILRVDDIVKCAPRQRQ 525

[Close]

BLAST of mRNA_H-paniculata_contig1630.3613.1 vs. uniprot
Match: A0A7S2DLH1_9STRA (CCT-beta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DLH1_9STRA)

HSP 1 Score: 758 bits (1957), Expect = 1.360e-267
Identity = 391/524 (74.62%), Postives = 448/524 (85.50%), Query Frame = 1

Query:  133 MATEAVLNDKAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSVGSRDGGISVTNDGATILRAIHVDNAAAKVLVNIAKTQDDEVGDGTTSVTVLCGELLREAEQLVNQRLHPQTIIQGWRLATACARKVLAEAAEDNGKDDVKFKEDLTNIAKTTLSSKLLTHEKDRFSALAVDAVLRLRGSGNLDYIQIIKKPGGSLKESYLEEGFILDKKIGIGQPKVMENAKILIANTAMDTDKIKIYGSRVRVDSMNKVAEIEEAEKDKMRNKCKKIIDHGVNVFVNRQLIYNFPEQIFAEAGVMAIEHADFEGVERLAAVTGGATASTFDHPELAVLGECAKIEEVMIGEDTLIRFSGCKAGEACTIVLRGASKHVLDEAERSLHDALCVLTQTVKETRTVPGGGCTEIAMAAAIDAEVPNTAGKKALAMEAYARALRQLPTIIADNGGFDGSELISSLRAAHAKGNKTAGLDMNEGVVGDMKALGVREAFKSKLQVLVSAAEAAEMVLRVDDIIKCAPRQR 1704
            M+ EAVLN +AQVDKG+NAR+SSF+GAIA+ADLVK+TLGPKGMDKIL SVGS  G I++TNDGATILR+IHVDNAAAKVLV+IAK QDDEVGDGTTSV VLCGELLREAE L+ QR+HPQTII+GWR+AT  AR  L   A DN  D+  F++DL NIAKTTLSSKL+ HEK  F+ LAV  VLRL+GSGNLD+IQI+KKPGGSLK+SYL +GFILDKKIG+G PK +E+AKIL+ANTAMDTDKIKIYGSRVRVDSM KVAEIEEAE+DKMR+K +KIIDHGVN F+NRQLIYNF E+IFA A VM+IEHADF+G+ERLAAVTGG   STF+HPE   LG    IEE+MIGED LI+FSGC  G ACTIVLRGAS H+LDEAERS+HDALCVL +TV  T+T+PGGGCTE+AMA AID EV N +GK ALAMEA++++LR +PTIIADN G+D S L++ LRAAHA G KTAGL M EG V DM  LGVRE+FKSKLQVL SAAEAAEM+LRVDDIIKCAPR R
Sbjct:    1 MSAEAVLNAEAQVDKGENARMSSFIGAIAVADLVKSTLGPKGMDKILTSVGSEGGNITITNDGATILRSIHVDNAAAKVLVDIAKVQDDEVGDGTTSVAVLCGELLREAESLIQQRIHPQTIIEGWRMATNIARAELESMAVDNSADEEAFRQDLVNIAKTTLSSKLVYHEKSHFAELAVTCVLRLKGSGNLDHIQILKKPGGSLKDSYLADGFILDKKIGVGCPKRLEDAKILLANTAMDTDKIKIYGSRVRVDSMAKVAEIEEAERDKMRSKVQKIIDHGVNCFINRQLIYNFSEEIFASANVMSIEHADFDGIERLAAVTGGEICSTFEHPESVKLGTVKLIEEIMIGEDRLIQFSGCGGGAACTIVLRGASNHLLDEAERSMHDALCVLARTVAITKTIPGGGCTEMAMARAIDNEVANVSGKSALAMEAFSKSLRAMPTIIADNAGYDSSLLVTQLRAAHASGQKTAGLHMYEGRVADMNELGVRESFKSKLQVLSSAAEAAEMILRVDDIIKCAPRPR 524

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig1630.3613.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig1630.3613.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LJ06_ECTSI	0.000e+0	93.92	CCT-beta n=1 Tax=Ectocarpus siliculosus TaxID=2880...	[more]
A0A836CDN2_9STRA	2.360e-314	86.83	CCT-beta n=1 Tax=Tribonema minus TaxID=303371 RepI...	[more]
A0A7S2R4B7_9STRA	6.280e-280	76.76	CCT-beta n=2 Tax=Rhizochromulina marina TaxID=1034...	[more]
A0A6V1SR55_HETAK	7.780e-279	74.86	CCT-beta n=1 Tax=Heterosigma akashiwo TaxID=2829 R...	[more]
I2CP43_NANGC	5.940e-276	75.81	CCT-beta n=1 Tax=Nannochloropsis gaditana (strain ...	[more]
A0A7S2RXR6_9STRA	6.680e-273	74.76	CCT-beta n=1 Tax=Eucampia antarctica TaxID=49252 R...	[more]
A0A7S2U8E3_9STRA	6.270e-271	75.43	CCT-beta n=1 Tax=Attheya septentrionalis TaxID=420...	[more]
A0A7S2F9V5_9STRA	3.460e-270	74.29	CCT-beta n=2 Tax=Florenciella parvula TaxID=236787...	[more]
A0A6G0XN95_9STRA	1.620e-268	73.14	CCT-beta n=10 Tax=Saprolegniaceae TaxID=4764 RepID...	[more]
A0A7S2DLH1_9STRA	1.360e-267	74.62	CCT-beta n=1 Tax=Dictyocha speculum TaxID=35687 Re...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig1630	contig	H-paniculata_contig1630:1235..16564 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	959.1
Seed ortholog evalue	8.3e-277
Seed eggNOG ortholog	2880.D8LJ06
Preferred name	CCT2
KEGG ko	ko:K09494
Hectar predicted targeting category	other localisation
GOs	GO:0000003,GO:0000166,GO:0000323,GO:0001775,GO:0002199,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005766,GO:0005773,GO:0005775,GO:0005829,GO:0005832,GO:0005856,GO:0005874,GO:0005886,GO:0006403,GO:0006457,GO:0006458,GO:0006810,GO:0006887,GO:0006955,GO:0007338,GO:0007339,GO:0008037,GO:0008144,GO:0008150,GO:0009566,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009988,GO:0010556,GO:0010557,GO:0010604,GO:0010638,GO:0012505,GO:0015630,GO:0016020,GO:0016043,GO:0016192,GO:0017076,GO:0019219,GO:0019222,GO:0019899,GO:0019953,GO:0022414,GO:0022607,GO:0030141,GO:0030312,GO:0030554,GO:0031224,GO:0031225,GO:0031226,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031410,GO:0031625,GO:0031647,GO:0031974,GO:0031982,GO:0031983,GO:0032204,GO:0032206,GO:0032210,GO:0032212,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0032880,GO:0032940,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0034622,GO:0034774,GO:0035036,GO:0035578,GO:0035639,GO:0036094,GO:0036230,GO:0042119,GO:0042582,GO:0043085,GO:0043167,GO:0043168,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043299,GO:0043312,GO:0043933,GO:0044085,GO:0044093,GO:0044183,GO:0044297,GO:0044389,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044433,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044459,GO:0044464,GO:0044703,GO:0045055,GO:0045321,GO:0045935,GO:0046658,GO:0046903,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0050896,GO:0051052,GO:0051054,GO:0051082,GO:0051084,GO:0051086,GO:0051128,GO:0051130,GO:0051131,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051338,GO:0051347,GO:0051704,GO:0051972,GO:0051973,GO:0060205,GO:0060255,GO:0060341,GO:0061077,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0070202,GO:0070203,GO:0071840,GO:0071944,GO:0080090,GO:0090666,GO:0090670,GO:0090685,GO:0097159,GO:0097367,GO:0097708,GO:0099080,GO:0099081,GO:0099503,GO:0099512,GO:0099513,GO:0101031,GO:1901265,GO:1901363,GO:1901998,GO:1903827,GO:1903829,GO:1904356,GO:1904358,GO:1904814,GO:1904816,GO:1904851,GO:1904872,GO:1904874,GO:1904951,GO:2000112,GO:2000278,GO:2000573,GO:2001252
EggNOG free text desc.	chaperone mediated protein folding independent of cofactor
EggNOG OGs	COG0459@1,KOG0363@2759
Ec32 ortholog description	TCP-1-like chaperonin intermediate domain
Ec32 ortholog	Ec-20_002230.1
COG Functional cat.	O
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko03036,ko03110,ko04147
Exons	14
Model size	2357
Cds size	1584
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig1630.3613.1	prot_H-paniculata_contig1630.3613.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig1630 1367..15923 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622929300.0736966-UTR-H-paniculata_contig1630:1234..1366	1622929300.0736966-UTR-H-paniculata_contig1630:1234..1366	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig1630 1235..1366 +
1691480806.5265603-UTR-H-paniculata_contig1630:1234..1366	1691480806.5265603-UTR-H-paniculata_contig1630:1234..1366	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig1630 1235..1366 +
1622929300.4881525-UTR-H-paniculata_contig1630:15923..16564	1622929300.4881525-UTR-H-paniculata_contig1630:15923..16564	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig1630 15924..16564 +
1691480806.687784-UTR-H-paniculata_contig1630:15923..16564	1691480806.687784-UTR-H-paniculata_contig1630:15923..16564	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig1630 15924..16564 +

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig1630:1235..16564+
coding sequence from alignment at H-paniculata_contig1630:1235..16564+

protein sequence of mRNA_H-paniculata_contig1630.3613.1

>prot_H-paniculata_contig1630.3613.1 ID=prot_H-paniculata_contig1630.3613.1|Name=mRNA_H-paniculata_contig1630.3613.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=528bp
MATEAVLNDKAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSV
GSRDGGISVTNDGATILRAIHVDNAAAKVLVNIAKTQDDEVGDGTTSVTV
LCGELLREAEQLVNQRLHPQTIIQGWRLATACARKVLAEAAEDNGKDDVK
FKEDLTNIAKTTLSSKLLTHEKDRFSALAVDAVLRLRGSGNLDYIQIIKK
PGGSLKESYLEEGFILDKKIGIGQPKVMENAKILIANTAMDTDKIKIYGS
RVRVDSMNKVAEIEEAEKDKMRNKCKKIIDHGVNVFVNRQLIYNFPEQIF
AEAGVMAIEHADFEGVERLAAVTGGATASTFDHPELAVLGECAKIEEVMI
GEDTLIRFSGCKAGEACTIVLRGASKHVLDEAERSLHDALCVLTQTVKET
RTVPGGGCTEIAMAAAIDAEVPNTAGKKALAMEAYARALRQLPTIIADNG
GFDGSELISSLRAAHAKGNKTAGLDMNEGVVGDMKALGVREAFKSKLQVL
VSAAEAAEMVLRVDDIIKCAPRQRQQA*

mRNA from alignment at H-paniculata_contig1630:1235..16564+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig1630.3613.1 ID=mRNA_H-paniculata_contig1630.3613.1|Name=mRNA_H-paniculata_contig1630.3613.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=15330bp|location=Sequence derived from alignment at H-paniculata_contig1630:1235..16564+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGCGCGGCACAGATCCGCCAACCGGCGGTAATAACAGCGGACTACACCCT
GTCTTGGACAGAGGCTACACTGGGAAAGGGCAGAAAGGAATAAAATCCGT
GGATTGTTCGTTCACGGAGAAAAGGCACAGCTATGGCGACTGAGGTGCGT
CTCAAAGCTGTACACTGGCAATATATCTTCAAAATAGGAAACGTGGTGTT
GGGGAGGTGGGGTCCAACGTCGAGTAGACTCCTGTTGTCCCTGCGATGTT
AATATTCGGTGTTGCTCATTGCGTTGGACGTTTGGCCGGCTCAGTAGAGC
TTCGATACCTTAAACGTAGCTCTGTCTATATCTACCACCTTACTCTTCAT
CTCTTGGCCGGTTGTGTAGTGCGTCAAAGCTCTCTGTCCTGTCGTAATCA
CGTCCGACAGATAGGGTAAGGTTTCGATTGTGGTTTCAAATTGATTGTGC
ACGTCCTCAGTCCAAGCAAGGTAGTGGCTCTCCACGACAGTTAATGAAAC
GCGACGGATTGTGCCACTGATGCTGATGGGATTGTGAGTACTGTAGAAAG
GAACGTGAATCTAAACGGCATTCAGGTTTGCCCACTACTGCATAAAAAGT
GCACAACTTTGGTGTTTGGCATAATCGGAGGCGAAATAGATGTACGGCAC
ACCCTTCACCTACTTGCATTCTTGACCTAATCTCCACCTGAAGCAGTCGT
GATTTTACCATCTAAAAAACACTCATATTCCACTCAAAAATTAGCGATCG
CGATTGACGAGGGGCGTAGTCAAGATACCAGTGTGTCGTGAGAGCAAGGC
ATTTGCACAAAATATATGCTTAATGAAGCATGGACGATGGGAAACTGGGT
GAGAGGGCGTATTATTGTCAAGTCCCGCGCCATCAATAAATCCAGGCGAA
GGCAAAAGGGCATGTACGTATTCGTTGCACCGAACCGTTCAAAGCTCAAA
GTACCCAAAAGCGAGTTACTCTACATGATGACCTTCATGCAGGCATCGCC
GAGCAGCATATAGCACCGTTACAGGGCCACACCGTCATAAACACTTTTAA
ATCTCGCCCGCAGTTCGAGGTTGCGTAGTGAAGTATCCTTGTAAATAAAC
TCACGGTAAAGCCGCCCACGTTGACGATATCGTGATTTCGGAACATATAT
TTATCTTTGTACTCAAGTCAATCCTGACAAACGAATCGCCCTGGGCATCT
TGCGCTGCTTGCAAGCATAGTGATTCACACTGCGCGTGCATCGTGCATCG
TGATGCATGTATCGCGGACACATCATGGACTGAATGGTCACAGCCATGGC
TCTACAGCTAGTAGCACAGTAAATCCCGACCCCACCCCCCCGCCCGACTG
CCTGTCTGCCTTTCACCATTTTTATGGGGCGAGCATTATGGCTCGTACCA
ACTGTACTCTATTGTACTGTACTCTGGTGTACTTGTCGTATCATACAGGC
GGTATTGAACGATAAGGCCCAGGTAGACAAAGGAGACAATGCGCGGCTGA
GCTCCTTCGTTGGAGCGATCGCCATCGCGGACTTGGTCAAGACCACGCTG
GGGCCCAAAGGTGTAGCTCGCTGAAAACATGACATATTCTTCATCTAGGT
CAACTAGCGCTTGGCGGTTTGTTAGCTGGGAGAAGTTGGGTCTCTGGCAT
GGAAACAAGGTGCTGTGCGGTGTGTAACGTTCGACAGAGCCAGAGTTTAT
AAATCGGTCTGCGCGAAACTTGGACAAAAAAAATCCGGAGTGTCACCTGC
ACGAATACGAATCCACCTACACAATCGCCGCTATTCCCATTTTCTACCGT
ATAAAGCTATGTTGCGTTGAAAAATTAAGTCCCAAAAGTAAATCTCATAA
AACAGCTTTTCTAGGCGTAGACCCTCCAAGGTTTGAACCTTTGTAACGCT
GTTCCCCATGTAATCCCCAAGTTGAAAAACAGGAAAAAGCAGGTCGGGAT
CTTTTGCTTTGAAAAGGAGTAAATTACGACATGATGGCCGGGTAGAGAGC
TATCGCTTTTCACTACGGGGTAGCAACGGACAGGGGTTCACCAAGTTTAC
TGGGCCACGAGTATAGTGTTGGATAGGAACACACACCATAAGCCATACCG
CTGAGAGACCGTACTGCGGTGTGTGTGCCAGATGAAATCAAGCAGACTAC
GTCCTCACAGGTTCATGACGATGACCAGTAGATAAATACCCACGAACCAT
GCAACCAGTCTTTGGGTTCCTCTTGTTGTGATTTGTTTTTCACCCAATCG
GCCGTTCATTCGACACCCTTTCAGTGCCGGCGGGGACTACCATAAAACGT
TTTGCTACCGCATCGGATGGGAAGGAAAATTAAATTCGCTGTTGCAGATC
GCATCGGGTATGCCAGCAATAGCGGAGTGATGTGTAGATGAAAGATCTTG
GCGATAGTGGGGATGCGGTATCGCAGTTGGTGCGAACAGCAAATACCGCG
TGTTCGCTGCCGATACTAAGCAGACCGCAGTCACAGGAAGATTGTGATTG
CAACGGGATTAGGACGGGCAAAATATATATTCCATGTTATTAAATACACA
GTGCAGTCAATGTAGAATCATCTACAGTAATGTGGTGACCCAGTACAGTC
AGTACATCATATTCCAATGTACCTTACACATTGCAACAGCAAGCATGCCG
ATAGAGCGTAGCACATCTTCATGATCGCACCGGTGCGTTCTCACCAAGAT
TCAACCTTCCAGAACGCACCTGGTTCGTTTACAATGGGGGGGGTGTGCCA
AAAGTAAACTCGCCTTTACAGATCGCGCCGGTGCGCCGGCTAAAGTTCTC
ACGGTAGTTGAGGATTAGTGTTAACGACACAAGTCAGCCAAGGTCTGAGA
TAGAAAACGATTTTATTTGGTGATATAAGAAAACACCTTTTCGCGATTCT
GGCCTGAAGCCATGTTTTTCCTGACAGCATCTACTTCGTATCCCAGCACT
TTCCCTCTGTAAAGAACGACCCCCCTCCTCGTTTATTACCCGGTGGGACT
GTTATATATATATATATTGTTCCCAAACAGTGTCAGGTGCCAGACAGGGT
TTAGTTACACTTTTGGAAGTATGTGTACTCTCCTCTGTTTGCATTGAAGT
GAAGGTCCCCTTGCGCTTATACATTCGATTTATCACGTAAAGGCAACTAA
TTTGTAGAGGGGAAGAATTTTTTTTCGATAACCTCGCCGTTTAGAGAGAA
GGGCATCTTGTGATTCGACTCACGTGCTTAATGAGGGAAAAATTGCAAGC
TGCTGTAAGCGACTCTAATCAGGCATACGACAATTCGCTTTACGTCGATT
AGTATGTGTGTTTGCCCTTGGAAAAGGCACCTCAGTTCTCGTAATACGTT
GGAATTGCGTCAAAGCTACATTCCAGTTCTGTGAAGTTTGAGTCTACCTT
GTAATGCTGCACGATTCAGTCAAAAGAGAGTCAACTTGATATGTAAACAT
ATATATGAACCAAAGGTTCTCTTCTTTGTCGTTTCTTGTCCAGGTATGGA
CAAGATTTTGCAGTCTGTGGGCAGCCGCGACGGAGGAATTTCTGTGACCA
ACGACGGGGCGACCATCCTTCGGGCGATACACGTTGACAATGCGGCTGCG
AAGGTTCTCGTCAACATCGCGAAGACACAGGTAGGCCTCGTCCATTGCCT
GAAAGAAAATTCAAACTTGCAACACATCCTGCGGGGGGAAAGAGGGTTGG
GCTTTGCGGTACATATGGTGACGACCTATTGGTTTGGGTTTTTGTACTCG
AGGGGGATATCGACAAGAGAGAGCATAATACATCATCAGGTATACATACC
GCACCTACGGTGCTGGAACTGTATCGCAACCGATTTTTTGTTGACGGACT
GTGCCGGCTTCCACCCTGCTGCTCGCGGTCCTTCGTCCGCTGTCCGTCAT
TGGCTTACACTGGTCATTGCTCATCACCATCAGGACGACGAGGTGGGTGA
TGGCACGACGAGCGTAACGGTGCTGTGCGGGGAGCTGCTCAGGGAGGCCG
AGCAGCTGGTCAACCAGCGTCTGCACCCTCAGGTATGTGCGGTACTTTGA
AAGGATATCATACAAGGCCGGCCTATATCTCCCTCCTATCCCCTCCACCC
CCCCCCCCCCCGGGCCACCATCACTGGTAACAACCACTTAACCCGTAGAG
GGTTGGCATCTCGAAAATCTACTATCTTGAATCTGTTTTTGAGTCATGTT
TTTTTCAATGCAATATCGCCTTACATGCTGGAAAAATCGCACTACGAGTG
ATTTTGTAGGTCGATTCATTTGTCGGCGCATATACATATGTGCGTTTTGA
GTGAAAAGCACAATGGTTGTTTCGTTTTGTCCAGATGACGATGACACTCA
GACTTTTTGAAAAACGTTGCTCCCCGAAGGATTGCCATACAGTTTTACTA
AAAATGGTACGGAATATACCCACCCGCCACTGTGATGACGTCCAAATGAT
ATCCTGACTGTGTGTTCACCTCTTGAACTATGTTGCCGAAGTGCCTCAGA
GCACAGGCAAGCCATAAATGTATATATATATGCATATAACCTGTGATAAG
CTGACACACCGACTGTATTTTTCGTTTCCTTCAACCCCCTCTCTTATGTC
TGACGTCGTGCAGACTCACTGAGCTCTTGAGCAATAAGTATTTTTTTTTA
TTGAACTCCCCATCATCGATGGATATCATTTTATGTTTGTTTTTTCCAAA
GCTCGCAACCAAGAGCACGGTAGTCTGGTTCTTCTCTTGAGTGTTTTTGC
TTTTTGTGTCCCGAGGACCTTGCTTAGTTCGTGAGACTATTCAGCGAGTG
CGGACAAAATCATGACATGATAGCTTGTTGGAAATTCCGGTTCTTGCGTA
ATTTCCGCTGAATTGGGTTCGTCACAGCGAAAGAATTTGGTCCTTGTAGT
CCCCACAAATCTGGTCAAGACCCGCTTGCGTCGCTGACAGTATCGTTGAG
TAGTGGTATTTCGTTTGGTGTTGTCTAGAGGGCGTTGTGTTTTGGTGTAA
TCCGTGAAAGCTTAGCATTTTCTGCCTTTTTTCGATGCACATTTTTTTTT
TTCTCTTTTTCTTGTTGGTCCGTTTGGTTTTGGTCCTCTGTTTTGGCGCT
TTTTGTTTTCCTCTCTTATTCTGACATGTTGTACGATGTTTCATTTTAAC
ATGCACATTCTCCAAGCGTTTTGGTCGTATCTCCATGTGCCCTCTTTTTT
TGTATATACTGTTCTGTGCATGTACTTCGGTGTTGTTATCTTGGTTAATA
ATATATTAGACCATTATCCAGGGATGGCGGCTAGCCACCGCCTGCGCTAG
GAAAGTGCTGGCCGAGGCTGCTGAGGACAACGGCAAGGATGACGTCAAGT
TCAAAGAGGACCTTACTAACATCGCCAAGTGAGGAACACAACACCAAAGG
CTTACTTGATTTTTTTTTTTTTTTCGGAATGGATCGTTTGCGGCAATTTG
TATGTAGTAATTATTATAGCGTGTTTGTGTTGTCAACAGGGGGCACACTC
ATGTTTTGGATGTCATGTTTGTTGGATCGGGAGGACGGAGCTTTGTTTTC
AACAGCGTCATTAAAGGTTGGGAAAGCAAACGTAGAAGCGAAACCTTTTT
TCCTTTTACTGGTGGCTTTTTCTAGACGTGCGTGTAGGTTGCGCTTGAAC
GAGCGGCAGTATTTGTAGGTCGTTCGGGGATGGTGGGAAAGTTGTCAAGT
TACTATCGAAATACGATACAAAGTATGCCGGTAATGTTTTTTGTTGTTTT
TTGTGGTCTCACGTCTGGGATGAACGGAAAAGTAGAGTATGGTCTATAGT
CTACTGTGTGTATGCAGTGCCCCGGCTGGTGTGTATCGTAGGTCGTTTCA
CATCTACCTGTCTTGAGAAGGAACAAAACACTCTGCATCGTAAAGCAGAG
GAAAAGGTCGATCGGCAGGTAACAAGTGATGTCGGAAGAACACCTGAATT
TAGTGGTGTCTTCCGCCACATTCGACTCTCTTGAGAAGCAACACACACCT
TGGACTGTTGAATATAAAACAGTCGATCGATAGATAGGTTTGAACGAGAG
ATGACGTCGAAGAACACCAAATTCAGGGAATCACAAGTACATATCAGTCT
CCAGCCTTGGGAGGAAATGTATATTTAGATATGTCTATTCATTACCTGTG
ATGTTTTGTGGTGTGCTGTATATTATCACCAATGCGGTAGGGGGAAGCAA
GTTGCAAAGCAAAGCAAGGGAAGGAGTAGTGTTTCTTGAGATTTTGTACT
ACGCAGGAGGGACTCGATCGGTGATGTAAAAATCGCGATAGACGAAAGGA
GCCTGGGTGAAATCGCGCCGTATGTATATGATCCGTTTGGCTATCCAAGG
TTGTTGATCGCAGCGGGAACAAAGGTCAGTTCGTGGCTTTTAGCATTTTG
CATTCACGTATGGTTTAGGTTGTTTCGTTTGAAACCAAACGATAGCACGC
TGGCTGAATCGGGCAATTTATGGCTTGTTTTGTCTCCCTCTCCTTCCCCC
CCGCTATCTTTCTCGCTTTCTCTATCCATTTATTCCTTTTTTGTCAACCC
CTATTGCCATGTTTTTGTCGTTCAGGACAACGCTGAGCTCCAAGCTGCTT
ACGCATGAGAAGGATCGCTTCTCAGCCCTTGCCGTGGATGCTGTTCTTAG
GCTTAGGGGTTCCGGTAACCTGGACTACATCCAGATTATTAAGAAGCCCG
GGGGTTCTCTAAAGGAATCTTACCTTGAGGAAGGGTAAGGAAATAAAAAA
TGAGCTGATTTATTTTGGTGACAGGGGGGTGTTGGAGTGTAAGGGCTGTT
TGGTGAATGGTAGTGTTATAGGCAAGTGGCGTCTGGAGGAAGATAATCAG
CATTACACATGAACGTTTCAATGCAACTTTTGGACTCCCGTCGGAACAAG
ACGATGTACTTTGTGTATTGTTTGTGTTCATCGCGAGGGCTGGGTACGTT
GTTGGCATGCGACTGGTTTATCATCTGCACGACTCGCACGCATTTTAACA
TGTTTCGGCGGTACCATCTGTTTTGCTTTACTGTGTATCACAAAATCTCC
TGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTACATTCTGTAACC
ATGTGATACTTTGACCATGACAATGCATGAATGGATTATGACAGCTGTAC
CCATTTATATTGTGTAAAAGTATTACAAGAAACGATATTTTGGATAGCTG
GTTGCCTCCATTTTTTTTTTTTAACCCCCGGAAGGCTAAGGCGAAAACCT
TTATCCGGTGCTTCCATACCTAAGTATTTTATCAAAGTATTTCTGCATTT
TCTTTAACAGAACACAGTTATTTATCCCTCTGCGGGGTAGGCGCCACCCC
GGTTCGGCCGGACCAAGTAGGCAGTACGGGGGTTGCACCCACTAAGAGAC
CTCTGACTAGACTTTCAGTCGTGCTCAGTTCACGAGCTACCCCACCCGTT
CGGGCGTACGTCCGTGTTCGCCTCCAAGTGACGCCTGTTTTGTCTCTCGC
TGAGAAACGGAAGTAGGACTTGAACGGAAAGACATAGAAGGTGCGTATTA
CTAGTCGTCTGGGCAGTCATCGGTATCGTGTGCATGAAATCGTCGGCCGA
ATCAGTTTTTTCGCCTTCAGTTCAATCGCGATGAAAGTGTGCGAAAGATC
CTGAGGTTTGGGTAGCGAGAGCTACCAACCGTACGTTTGTATTAACGAGG
CGCCTTCCCTCGGGACGTCTCAGCGATGGGACGGCGATCGATCCAAGGAG
GGTGACGCGAGAGAGATTGCAACAGTATTTTCGAATTCCGTATTATTCCG
TCTGATGACATATGAAACAAGGATTGGAGAGTGTTCAGTAGTTAATCTAA
TATTGGTTGTATGTGTGTAGTTTACATGGATGTATGCGACCGAACGTTGA
TACTTGGATATTGCCGATCGATGGCAATAAAAAAAGGGATTGTGTGGAGA
GTAGTACCCTATGGAAAGGAATAATTCTCACTAAAGTCCGTAGAGGACAG
AGCACCCTTTTCACAAGTGGCGTCGTCGATAGGACTGCTGACTGTGGGAC
CTGAAGGTCGTGAGGTAGAATCCGACCATAATCACCGAAAAAGAAACTTA
CGAGTCAAGCAGGCCGCAAAAATGGTGGGGGAACATGGACAAGGTTTCCA
TACAAAATTCTAGGAAGACAATCACAAGAGAAGGGAAAATTGTGAACACG
AAAGGAGTGAACGTCCTCACCGCCAGCCGGTGAAACCGGTTATCACTAGT
GGGCACTTGGGAAAATAGCAAAGAGCCTGATAAGGGGTGTGTGTGATGTG
GAGGGTACCGTATAGAAATGAATAATTCCCACTAAAGTCTGTAGAGGAAA
GAAGAGGCTTTTCACCCACGGATCTACGCCCGAACGGGTAGGGTAGTTCG
TGAACTGAGCACGACTGAAAGTCTAGTCAGAGGTCTCTTAGTGGGTGCAA
CCCCCATACTGCCTACTTGGTCCGGCCGAACCGGGGTGGCGCCTACCCCG
CAGAGGAATAAATAACTCTGTTGTGTTAAAGAAAATGCAGAAATACTTCA
TTAGAAGTACTTAGGTATGGAAGCATCGGATAAAGGTTTTCGCCTTAGCC
ATTCGGGAGTTAAACCCCCCCCCCCCCAAAAAAAAAAAAAAAACACCTTT
TCACATTTGTAGTAAACAGATGACAAGATGTGATTTGTAATAGGCTTCCG
ATAGTCAGTGTAGATTGGAAACTGACTCGTAAATGGGCATGAACAGTGAA
CAGATGCATCGAAGCAAGCCAGCAATCCATACAAGACACCTCGGTGAAGG
TACAGGAGCAATTAACAATTTGGGAAGACCTTTCCGCACGATGGAGGGAG
TGCCACCAGTGTCAGAGAGCCAAAACCTCGGCGCCATTTTCAGTATGCTT
TTTTTTTTTGTTGCCCCTTTTTTGTGCGATTATACGACAGGTTCATCTTG
GACAAAAAAATTGGGATCGGACAACCTAAAGTCATGGAAAACGCCAAGAT
TCTCATCGCCAACACCGCCATGGACACGGACAAAATCAAGATTTACGGAT
CGAGGGTCAGGGTAGACTCGATGAACAAGGTACATGCGTTTAAGTTTATT
GTACAATGGATAAGCTATGAATGACGCTTGGAGCATAGTTGGAACCTGTG
AACCAAAATAATCAGCTTGAACTATTCGAAATTAAACCTGTAATGAATTG
GGGTGATTGGTTTTTTACTTGAAACGCATACAAGAACAGCGTCGACTGCT
TTGGTTTCGAATTGGTCAGTGAGCAATGGTACATGATCCACTCATGTGTG
TTTCCTTTGTTTTCTTGCGTTTGGTGGTTTGATACAATACGTGATGACGC
ACGTACATCGATAGGTGGCCGAGATAGAGGAGGCGGAGAAGGACAAAATG
CGCAACAAGTGCAAGAAGATCATTGATCACGGAGTGAACGTATTCGTGAA
CAGGCAGCTCATCTACAACTTCCCCGAACAGGTAACTTCGTAGTTCAGGG
GATCACAAAGACTGGCCACGAATGCCTCAAAACATCTATGAGAGCACGAT
GCTTCCATGAGAGACTGACTATCGAATGTCCACTGGCCAATCTGGTGGTT
GGTTTTAAGTTTTGGGGCGTAGTGCGGAGCATGTGCCCTTGAACTTTATG
TTGCGGGTGAGCTGACCATCAAGGGTCTGAAGCATCCAGTGAAGCTGTCC
TGATGATGAGACAGGAATGCCAGTGGATGGTACTATCTAAGGACCGGAGT
TCAGGAACATCAGGAACGTTCTCTCTCTATCTACCGCTGTAGTTTTCGGC
CTCACCATACACCGTAGTCATCGTTCTCGAGGATGCACGTTGTATGTACG
ATCTATTACCACCCCGAATGACAGTATTGATGAGAATCGCTTTTTTTCGA
GGGAGCAGATGAGCCTACTCTACCGCTGTCGAAAGAGTACGTCTATTCAT
CTAATGACCGATATGTGTATGCCGACGAGATTGATATTTCAAACGGTAAA
AAACAAAGGTTCGACATCACTGTTCACATACACATACACACAAGTGCAAA
CAGTGCAATACTTCGAGAGAAAGTCAAGGTTACATTGAAAAAATGCTAAT
ACTCCAACGACGCAATGTTTGTTGTCGGTATTTAGCATCCATAGTTTGCA
AGGATATCAGGTTTGGAGAAATATTCGAACCGAGGCGTTCTCAGAGCACT
ACGGTATCAACTAAAAGTTTTTTTCAAGATAAACAGCTCCGGCACTCTAC
ATAATCACTTCTTTGGGATTGGCCGAGAAACAACAGATCTTTGCGGAAGC
CGGAGTGATGGCCATCGAGCACGCGGACTTCGAGGGCGTAGAGCGACTGG
CGGCGGTGACCGGAGGCGCCACGGCATCCACGTTCGACCATCCCGAGCTG
GCGGTGCTCGGAGAATGCGCCAAGATCGAGGAGGTAACGTAATTGACGGA
TAATAACCTTACAGAATAGTAGTGAGCTAGTCGGTTGAGTTTGGGGAGCG
TGGGTGTTTTGAATCACATCGTTACGGACGTCACTACTGTATTGCCATTT
TGATTTAATGTTGGGTTGTTAAATAGGCGGTTGAGATCTATTTTAAACCC
TGCTTGAATGAGGCGTGGTGTGTGCCACTTTCGCAGGAAAATATGATTGA
ACCATTTTTTTGTCGTGTGGTTCATCCTTTCGTTGTACTCCGACCCGAGC
ACAACGTCTGCCGGTGTCAAACCCTATCCCTAATCCCTAATCCCAACCCC
TTGGGCATAGTGTGCGTTGATACAGCTCAGGACAATGGCGTGATGATGAA
TCTTGGATGGTTCAACATGCTGAATTTGTAAAGTCAATCATTTTATGCGG
CAAAGTAGTAACAATGTGTCAGTCTGACTTGCGTTATGATCATGAGTTGA
GGACGTGTATGGCCATAAATGGGGTTTACTGATTTGGGCAGAAAAATTAT
TGCTGGCCTGGTTACCGCAGGCAGCACAGTGAGCTCTAGTAATTAAGATG
CTTCCCCTTATATTGCCATGCTCCATTTGTGTTTTTTGGAACATGCCCAT
TAAAAAAATGTGTGTAACTATGCGTTAACTCATCATTTCGCCTCTTGGGC
GGCTCCACCGTTTGCGGTGTGATGGTGTTTGGTGACGGTGCTGTTGGCTT
CAGTTTTTAGGCGGGGAATATGCACGGTTGCGTCCTGAGTGCTGTAGTAT
GCTTTTGAGCTCTTTTCGAGTGCACATGAATCACGTGGTATTGCCGTGGT
CTTTGGTTATTGTATTGTGTTGAATGATTTTTACGTTTTCAAGAGAAAAT
GCTCGGTTTAATTAAACCGGCCTCTGTCGGTGTGACCGCAAGTTCGTACA
TTTTTTTTCAGGTAGAGGTGTGTGTTTTTGTCCATGCTTGAACCACTGTA
ATAATTTTTGCCATGTTGTACTTGTTTTTCAGTTGTTGGCGCCCCCAAGC
AACACACTACGGAGACAGTACATTAGTACAGACGGAGCGTGACTCTTTAT
TGCTTCTTTCTTTTCTTTTCTTTTATTTGCTATCCTAGGTTATGATCGGC
GAGGACACCCTGATCCGATTCTCGGGTTGCAAGGCTGGCGAGGCGTGTAC
CATCGTGCTTAGGGGGGCTAGGTAGGCGAACTTGTCCAAACAACAACCTC
CGAGCATGATTCCTCACGGCTCGCGATGTGACACGGACGGTACCTTGAAC
TCTCAGGGGTAATTGCTCGCGATTGTCAATTGTGATGGACTGTAGATAAA
AGGGACAAAACGCTGGTGAGAATTGAGAATACACGTTCTGCGTTGCAGCA
GGAAATGTATGCACCCTGCGGACAAATACGAGTACTTGCAAATGGTATTA
GCAAAAATTGAAAGTGCTCGCATGAGTTTCAGAACAAACTCGTCTTCTAT
ATGTGCCCCGGACCATCCACGACTGTTCATAATACTCGTAAATCGAATGG
ACAGGGGTGTGTGTACTTCATTCTATGTGTCCTCTCATTCTGAAACTCAG
GCGAATATATATATATATATTTGTGAATACTATTTGCAAGTAGTCGTATT
TGTCCAGGGGGTGAAGGTACGTTACGAAGGTATTTCGATGAGTAACAGCG
CTAACCGAAGAAGTAACAGACCGGCAGAGCCTTTTAGGACCATTATTCAT
GATACGTTTTAATGACTTTTTTCGATTGTTTCCGCAGGAACGATAACAAA
CTACATGCGCAGTTGGGGTATAGGTCGGACTCTGGATATTTTCTCCGGAA
ATGACAACCAGTTTGGAAGCAAAAACGTAAAAACATCTTGAGAATCCATT
CACTCGAAAATAAAGGCTTTGGGTTCAAACGCCTCAAAATCACGAAAAGT
TAGCGGTAGGTAGCCACGGCAGGCGGATGTTGATCTGGAGATACATCTTT
AAGGTCAAGTCACATTCGCAATATTGCCTGGAGTTATGGAAATGCGACGG
GATTAACACTGGTCGTCATGTTATGCTGTGTCGAACTTTTTCTTTTGGCG
GAGTCCGTTAACCCCCCGCCCATTCGGTTGCCATTCCGTTGCACAATTGA
CGTTACGATCTGCAGCAAGCACGTATTGGATGAGGCGGAGCGATCGTTGC
ACGATGCTCTATGCGTGCTTACGCAGACAGTCAAAGAGACGAGAACAGTG
CCGGGAGGCGGCTGCACGGAGATTGCCATGGCTGCCGCTATCGACGCGGA
GGTGAGTTTGAACGAACGAACAGCGGCTGAACTCCCCCCCCCCGCCGCCG
CCGCCGCCACGCCGACCGAATGTGATGCCAAATAATTCCATCTATCATGG
AAAATCTAACTTGGTGTCTATAACTAGTGAACGGTTGCCACAAACCGTTG
TCTGTGTGGTTCTTACACGGGCCGGTTTTGTAGCGGTAGACGGGTACCGC
ACGCATTCAAAGTAGAGGGTGGGACCAAACTGCCGCCTTATTTGTGGCGT
GAACAAGAGTCTAACAGCACGACCATGCAAAATGTGACAGGGCGCTGCAC
AGAGCGACCAGGCCTGCCCTCTGGAAACAGTAAGCAGTGCCACTTAATGT
TTTTAAAGATTCATGTTTGCTGAGGGGTAACATGCTCTGTCTTTTTTTTT
CTGCTGTTCTCTCGCATTTTGGCAGGTGCCGAATACTGCGGGCAAGAAGG
CGTTGGCCATGGAGGCATACGCGCGCGCGCTGCGGCAACTCCCGACGATC
ATCGCGGACAATGGCGGCTTCGACGGGTCAGAGTTGATCTCCAGTCTTCG
TGCCGCGCATGCTAAGGGGAACAAGGTGGTACCTCTTTCGTATTTAAAAA
CCATATCTGCAGGTTTTTTAGTTCTTTGTTTTGTGTTTTGTCGTGGTTGG
GAGTGCATTAGGGGTGTCGTGCTTTTTTTATCCATCTAATGAGGAACTAG
ATGGTGCTGGACATATAATAAAATTTGTGTGGTTGTCTGGGAAGCATTGT
GAGCAGTTTCGGTGTCTGTTTTTTTTTCCTAGTGCGAGAATGTCTGCGTT
AACGTGCAATGCTGGTCTTGTTTCTTGTCTTTCCTTGATTAACTAATGTC
GCCTCGTACAGACCGCGGGACTGGACATGAATGAAGGGGTAGTGGGAGAC
ATGAAGGCGCTTGGCGTAAGGGAGGCGTTCAAGAGCAAGCTGCAGGTGAA
TTTCTAGACGTGCTAATTGTGTGGAAGGTCAGCGAAGCTGACCTGCGCAA
GTCAGCACGAAGGCCTAGGCTCACTGTTTCGCCTACTTGTTGCTGCTTCT
TCGGTTCGTCTTGTGATGGAGTATAACGCGCACGCATGTGTAGTGTAGAT
GTGAAGGTATCGAGCTGTACATGATAGCTGTCTTGTGTCAGTGTGCAAAC
TCGGACATGAAGGATTCGAGATCACGGAACATTGTAACACAGGAAAATTG
TCATTCATATCTTCACACCAGAGTACATATGGCCATACGTTCTACTCCGC
AGAAGGAAGGCACTACGGCAGTACGTGCCAGAAACGTCAAACACGGCGCA
ACAGAAACCTCCTGTGCAGAAGCTACAGTGCTCCAACCGCAATACCTCTG
TAGCTCAGCTGTTAACATTTCTCCACCGCCAAAAAGAATGCCAAGGTATC
AACATTTTTTTAGGCTACACTGTCATTCATATAATGTCATGCACCGTCTG
CAGCATTGTGTGTATGGTCTATGCGCTGTTCCTTGCGTATCGGCGCACAC
AAACTACTCTTCCGCCGTAAATGGGTCGACCCGGTACGCACGATCTCAAG
CTTGCGTCGCTTCGTACCACATCCAAAGGGGCTCCTTTATTTAATCTATG
ATGTGATCGTTCTTACGTTTCGTGAGGCTTGTGCACTGTTTGGTCTGAAA
TACAGGTTGGGGATTTCTGATATAGAAAATGCTGCCTACACCCTACTGTA
CCGTATCGTGTCTTATTGGTGCAAGGAGATGAACCTGTAGAAAAGGGGAG
CTGTCAACTCAGCTTACATGTGCCTCTCGTGTGCTGACGTTGTGGGCCCT
TCACCATTTTTTAAGACCTATTTAAGAGTCGGAAGTACTACCGTGCTTTG
AATTTTGACCCCTTGATCTCCCCTGCGGCCTTGGACCCCCCCTTGGCAGG
TGCTAGTGTCAGCAGCGGAGGCAGCAGAAATGGTGCTGCGTGTGGATGAT
ATCATCAAATGTGCGCCCCGCCAACGTCAACAAGCATGAACAGCAATGTT
CCACGTTCGTCGTTAGGGCCGGGGTTAAGGTCGAAAGAGCGGAGTTGGTG
GCATGGAGCATATGAGCTTGCGCATCCCACCAGCTTAGAGTGAAGCTGTC
AAGGACGGACTGGCAGAGATTCGGGGGGGGGGAGGGGGATTGAACATTAT
CCCCAACATTGGGAATATGTTGTCGCAGATTATGGTGCTTCGTCGGGCAA
AATATTAGTCGCGATGAGGGGTTGAATGCCGAGATATGCTGTAGTCCTCA
GTAGCTGGCTATATGATTGGAACGTCGCATTCTCCAATTTCATTCTTGGC
AACCATACAAGCTTGATGGATTATGGTACGTCCTACGGCTGCATGTATCG
TATATCGCAGAGGTACCCGACCCAAACGCTAAGGGATAACCCCCTGCCAC
CCACGATTATCACGTTTTGTCACGGTCAGTTTGACCTTACGAACCTCCCC
TTGCTCCCGGACCCTCGGTCGAAAAAGTTGAGCATCTTAGTAAATGGAGG
CGTTTGCTGTCCAAGCACCAAAAAGGCGAAAAGAAAACGAAAACGATAAA
AAATCAGGCGCTGCAATGAAGCCCGGGGATGATATCCGGGTGTCCCCTGA
ATGCCATTAAAGTGGACACTTCCATCAAAT

Coding sequence (CDS) from alignment at H-paniculata_contig1630:1235..16564+

>mRNA_H-paniculata_contig1630.3613.1 ID=mRNA_H-paniculata_contig1630.3613.1|Name=mRNA_H-paniculata_contig1630.3613.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3168bp|location=Sequence derived from alignment at H-paniculata_contig1630:1235..16564+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGACTGAGATGGCGACTGAGGCGGTATTGAACGATAAGGCCCAGGT
AGACAAAGGAGACAATGCGCGGCTGAGCTCCTTCGTTGGAGCGATCGCCA
TCGCGGACTTGGTCAAGACCACGCTGGGGCCCAAAGGCGGTATTGAACGA
TAAGGCCCAGGTAGACAAAGGAGACAATGCGCGGCTGAGCTCCTTCGTTG
GAGCGATCGCCATCGCGGACTTGGTCAAGACCACGCTGGGGCCCAAAGGT
ATGGACAAGATTTTGCAGTCTGTGGGCAGCCGCGACGGAGGAATTTCTGT
GACCAACGACGGGGCGACCATCCTTCGGGCGATACACGTTGACAATGCGG
CTGCGAAGGTTCTCGTCAACATCGCGAAGACACAGGTATGGACAAGATTT
TGCAGTCTGTGGGCAGCCGCGACGGAGGAATTTCTGTGACCAACGACGGG
GCGACCATCCTTCGGGCGATACACGTTGACAATGCGGCTGCGAAGGTTCT
CGTCAACATCGCGAAGACACAGGACGACGAGGTGGGTGATGGCACGACGA
GCGTAACGGTGCTGTGCGGGGAGCTGCTCAGGGAGGCCGAGCAGCTGGTC
AACCAGCGTCTGCACCCTCAGGACGACGAGGTGGGTGATGGCACGACGAG
CGTAACGGTGCTGTGCGGGGAGCTGCTCAGGGAGGCCGAGCAGCTGGTCA
ACCAGCGTCTGCACCCTCAGACCATTATCCAGGGATGGCGGCTAGCCACC
GCCTGCGCTAGGAAAGTGCTGGCCGAGGCTGCTGAGGACAACGGCAAGGA
TGACGTCAAGTTCAAAGAGGACCTTACTAACATCGCCAAACCATTATCCA
GGGATGGCGGCTAGCCACCGCCTGCGCTAGGAAAGTGCTGGCCGAGGCTG
CTGAGGACAACGGCAAGGATGACGTCAAGTTCAAAGAGGACCTTACTAAC
ATCGCCAAGACAACGCTGAGCTCCAAGCTGCTTACGCATGAGAAGGATCG
CTTCTCAGCCCTTGCCGTGGATGCTGTTCTTAGGCTTAGGGGTTCCGGTA
ACCTGGACTACATCCAGATTATTAAGAAGCCCGGGGGTTCTCTAAAGGAA
TCTTACCTTGAGGAAGGGACAACGCTGAGCTCCAAGCTGCTTACGCATGA
GAAGGATCGCTTCTCAGCCCTTGCCGTGGATGCTGTTCTTAGGCTTAGGG
GTTCCGGTAACCTGGACTACATCCAGATTATTAAGAAGCCCGGGGGTTCT
CTAAAGGAATCTTACCTTGAGGAAGGGTTCATCTTGGACAAAAAAATTGG
GATCGGACAACCTAAAGTCATGGAAAACGCCAAGATTCTCATCGCCAACA
CCGCCATGGACACGGACAAAATCAAGATTTACGGATCGAGGGTCAGGGTA
GACTCGATGAACAAGGTTCATCTTGGACAAAAAAATTGGGATCGGACAAC
CTAAAGTCATGGAAAACGCCAAGATTCTCATCGCCAACACCGCCATGGAC
ACGGACAAAATCAAGATTTACGGATCGAGGGTCAGGGTAGACTCGATGAA
CAAGGTGGCCGAGATAGAGGAGGCGGAGAAGGACAAAATGCGCAACAAGT
GCAAGAAGATCATTGATCACGGAGTGAACGTATTCGTGAACAGGCAGCTC
ATCTACAACTTCCCCGAACAGGTGGCCGAGATAGAGGAGGCGGAGAAGGA
CAAAATGCGCAACAAGTGCAAGAAGATCATTGATCACGGAGTGAACGTAT
TCGTGAACAGGCAGCTCATCTACAACTTCCCCGAACAGATCTTTGCGGAA
GCCGGAGTGATGGCCATCGAGCACGCGGACTTCGAGGGCGTAGAGCGACT
GGCGGCGGTGACCGGAGGCGCCACGGCATCCACGTTCGACCATCCCGAGC
TGGCGGTGCTCGGAGAATGCGCCAAGATCGAGGAGATCTTTGCGGAAGCC
GGAGTGATGGCCATCGAGCACGCGGACTTCGAGGGCGTAGAGCGACTGGC
GGCGGTGACCGGAGGCGCCACGGCATCCACGTTCGACCATCCCGAGCTGG
CGGTGCTCGGAGAATGCGCCAAGATCGAGGAGGTTATGATCGGCGAGGAC
ACCCTGATCCGATTCTCGGGTTGCAAGGCTGGCGAGGCGTGTACCATCGT
GCTTAGGGGGGCTAGGTTATGATCGGCGAGGACACCCTGATCCGATTCTC
GGGTTGCAAGGCTGGCGAGGCGTGTACCATCGTGCTTAGGGGGGCTAGCA
AGCACGTATTGGATGAGGCGGAGCGATCGTTGCACGATGCTCTATGCGTG
CTTACGCAGACAGTCAAAGAGACGAGAACAGTGCCGGGAGGCGGCTGCAC
GGAGATTGCCATGGCTGCCGCTATCGACGCGGAGCAAGCACGTATTGGAT
GAGGCGGAGCGATCGTTGCACGATGCTCTATGCGTGCTTACGCAGACAGT
CAAAGAGACGAGAACAGTGCCGGGAGGCGGCTGCACGGAGATTGCCATGG
CTGCCGCTATCGACGCGGAGGTGCCGAATACTGCGGGCAAGAAGGCGTTG
GCCATGGAGGCATACGCGCGCGCGCTGCGGCAACTCCCGACGATCATCGC
GGACAATGGCGGCTTCGACGGGTCAGAGTTGATCTCCAGTCTTCGTGCCG
CGCATGCTAAGGGGAACAAGGTGCCGAATACTGCGGGCAAGAAGGCGTTG
GCCATGGAGGCATACGCGCGCGCGCTGCGGCAACTCCCGACGATCATCGC
GGACAATGGCGGCTTCGACGGGTCAGAGTTGATCTCCAGTCTTCGTGCCG
CGCATGCTAAGGGGAACAAGACCGCGGGACTGGACATGAATGAAGGGGTA
GTGGGAGACATGAAGGCGCTTGGCGTAAGGGAGGCGTTCAAGAGCAAGCT
GCAGACCGCGGGACTGGACATGAATGAAGGGGTAGTGGGAGACATGAAGG
CGCTTGGCGTAAGGGAGGCGTTCAAGAGCAAGCTGCAGGTGCTAGTGTCA
GCAGCGGAGGCAGCAGAAATGGTGCTGCGTGTGGATGATATCATCAAATG
TGCGCCCCGCCAACGTCAACAAGCATGAGTGCTAGTGTCAGCAGCGGAGG
CAGCAGAAATGGTGCTGCGTGTGGATGATATCATCAAATGTGCGCCCCGC
CAACGTCAACAAGCATGA