mRNA_H-paniculata_contig16145.3543.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16145.3543.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 187 bits (475), Expect = 8.220e-50 Identity = 88/183 (48.09%), Postives = 126/183 (68.85%), Query Frame = 1
Query: 934 LPHPDDCFLNIMDEIEGVDGKRLWFEAGKMDVLGRPGVPIRLKVLGVLQVLGRGNCFDDVTQLSGMSVKTARTFFHAFCEKFVYELYDTWIKLPDGGDLKRVMAVYDGLGFTGAMRSADVTHVHWGCAPVSHSRLYTGKEKIPTLAYEMIVDHSGRVLSVITGYEGSQNDKAIVRLDKAVSKI 1482
+P+P F+++++ + D WF G+ DV GR VP+ LKVL LQ+L RGN F D+ +S +S +T + FH FC+ F ELYD ++ LP G DL++VM YD +GF GA+ S DVTH++WG P + +R+YTGKE PT+A+++ VDHSGRVL+V G+ G+ NDK I+R DKAV++I
Sbjct: 138 VPYP--FFVHLVELVRDRD----WFPTGESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRI 314
BLAST of mRNA_H-paniculata_contig16145.3543.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 179 bits (453), Expect = 8.520e-47 Identity = 91/189 (48.15%), Postives = 120/189 (63.49%), Query Frame = 1
Query: 925 SSSLPHPDDCFLNIMDEIEGVDGKRLWFEAGKMDVLGRPGVPIRLKVLGVLQVLGRGNCFDDVTQLSGMSVKTARTFFHAFCEKFVYELYDTWIKLPDGGDLKRVMAVYDGLGFTGAMRSADVTHVHWGCAPVSHSRLYTGKEKIPTLAYEMIVDHSGRVLSVITGYEGSQNDKAIVRLDKAVSKICKD 1491
S LP+P E+ + +R WF GK D GR G+P++LKVL LQ+L RGNCF D+ +S +S++TA FH F F E+Y I LP G K+VM YD LGF+GA S DVTH+ WG P + +R YTGKE PT+AY++ VDH+ RVL+V G+ GS NDK+I+R D AV+KI +D
Sbjct: 119 SFRLPYP------FFVELVALVKQRDWFPTGKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIRED 301
BLAST of mRNA_H-paniculata_contig16145.3543.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 164 bits (414), Expect = 1.270e-41 Identity = 85/185 (45.95%), Postives = 109/185 (58.92%), Query Frame = 1
Query: 943 PDDCFLNIMDEIEGVDGKRLWFEAGKMDVLGRPGVPIRLKVLGVLQVLGRGNCFDDVTQLSGMSVKTARTFFHAFCEKFVYELYDTWIKLP--DGGDLKRVMAVYDGLGFTGAMRSADVTHVHWGCAPVSHSRLYTGKEKIPTLAYEMIVDHSGRVLSVITGYEGSQNDKAIVRLDKAVSKICKD 1491
P FL ++ ++ + WF D +G P+ KVL L +LGRGNCF + Q+S MS KT + FH FC F E+YD I LP + G L VM YD LGFTGA+ S DVTH+ W P + +R YTGKE PT+AY++ VDH+GR ++V G+ GS NDK IV D AV KI D
Sbjct: 50 PYTVFLRLVALVKSKN----WFSTAVTDAVGWASHPVEHKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTD 230
BLAST of mRNA_H-paniculata_contig16145.3543.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 162 bits (409), Expect = 3.390e-41 Identity = 74/145 (51.03%), Postives = 103/145 (71.03%), Query Frame = 1
Query: 1048 PIRLKVLGVLQVLGRGNCFDDVTQLSGMSVKTARTFFHAFCEKFVYELYDTWIKLPDGGDLKRVMAVYDGLGFTGAMRSADVTHVHWGCAPVSHSRLYTGKEKIPTLAYEMIVDHSGRVLSVITGYEGSQNDKAIVRLDKAVSKI 1482
P +VL LQ+L RGN F D+ +S +S +T + FH FC+ F ELYD ++ LP G DL++VM YD +GF GA+ S DVTH++WG P + +R+YTGKE PT+A+++ VDHSGRVL+V G+ G+ NDK I+R DKAV++I
Sbjct: 79 PPHTQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRI 223
BLAST of mRNA_H-paniculata_contig16145.3543.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 160 bits (405), Expect = 8.950e-41 Identity = 82/182 (45.05%), Postives = 107/182 (58.79%), Query Frame = 1
Query: 943 PDDCFLNIMDEIEGVDGKRLWFEAGKMDVLGRPGVPIRLKVLGVLQVLGRGNCFDDVTQLSGMSVKTARTFFHAFCEKFVYELYDTWIKLPD--GGDLKRVMAVYDGLGFTGAMRSADVTHVHWGCAPVSHSRLYTGKEKIPTLAYEMIVDHSGRVLSVITGYEGSQNDKAIVRLDKAVSKI 1482
PD FL ++ ++ D WF D R P+ KVL L +LGRGNCF + Q+S MS KT +T FH FC+ F E+YD I LP G+L VM YD LGF+GAM S DVTH+ W P + +R YTGKE +PT+ Y++ V+H+GR ++V G+ S NDK V D V KI
Sbjct: 63 PDSFFLRLVALVKSKD----WFTTSGCDAARRQSHPVEHKVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKI 240
BLAST of mRNA_H-paniculata_contig16145.3543.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 160 bits (406), Expect = 2.370e-40 Identity = 84/185 (45.41%), Postives = 113/185 (61.08%), Query Frame = 1
Query: 934 LPHPDDCFLNIMDEIEGVDGKRLWFEAGKMDVLGRPGVPIRLKVLGVLQVLGRGNCFDDVTQLSGMSVKTARTFFHAFCEKFVYELYDTWIKLP--DGGDLKRVMAVYDGLGFTGAMRSADVTHVHWGCAPVSHSRLYTGKEKIPTLAYEMIVDHSGRVLSVITGYEGSQNDKAIVRLDKAVSKI 1482
+P+P FL +++ ++ K+ WF + D GR P+ KVL L +LGRGN F + LS MS T + FH FCE F E+YD I LP + G+L RVM Y+ LGF GAM S DVTH+ W P + R YTGKE PT+ Y++ V+H+GRVL+V G+ GS NDK I+ D+AV +I
Sbjct: 91 VPYP--FFLRLVELVK----KKDWFATTQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRI 269
BLAST of mRNA_H-paniculata_contig16145.3543.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE) HSP 1 Score: 160 bits (404), Expect = 2.560e-40 Identity = 83/184 (45.11%), Postives = 110/184 (59.78%), Query Frame = 1
Query: 943 PDDCFLNIMDEIEGVDGKRLWFEAGKMDVLGRPGVPIRLKVLGVLQVLGRGNCFDDVTQLSGMSVKTARTFFHAFCEKFVYELYDTWIKLPDGGDLKRVMAVYDGLGFTGAMRSADVTHVHWGCAPVSHSRLYTGKEKIPTLAYEMIVDHSGRVLSVITGYEGSQNDKAIVRLDKAVSKICKDE 1494
P + F + +D + V F DV GR VP+ LKVLGVLQVLGRGNCF DV QLS MS +TA FH FC+ F L+ W+ LP+G LK+V Y +G GA+ S D TH+ W P S + + GKE TL YE DHSGR+LS G+ G++NDK +V+ D +V ++ ++E
Sbjct: 79 PHEFFRHFVDLVRTV------FPTATRDVAGRQCVPLELKVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEE 256
BLAST of mRNA_H-paniculata_contig16145.3543.1 vs. uniprot
Match: D7FPI7_ECTSI (Transposon protein, putative, Pong sub-class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI7_ECTSI) HSP 1 Score: 157 bits (398), Expect = 1.240e-39 Identity = 79/162 (48.77%), Postives = 98/162 (60.49%), Query Frame = 1
Query: 1003 WFEAGKMDVLGRPGVPIRLKVLGVLQVLGRGNCFDDVTQLSGMSVKTARTFFHAFCEKFVYELYDTWIKLPD--GGDLKRVMAVYDGLGFTGAMRSADVTHVHWGCAPVSHSRLYTGKEKIPTLAYEMIVDHSGRVLSVITGYEGSQNDKAIVRLDKAVSKI 1482
WF D GR P+ KVL L +LGRGNCF + Q+S MS T + FH FC+ F E+YD I LP G+L VM YD LGF+GAM S DVTH+ W P + R YTGKE +PT+ Y++ V+H+GR +V G+ GS NDK IV D AV KI
Sbjct: 106 WFATAGCDAAGRQSHPVEHKVLAWLTILGRGNCFASIYQMSWMSAATVQAMFHMFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIVWNKCPYNLPRSYTGKEGVPTIGYQVTVNHAGRASAVTEGFTGSTNDKTIVCWDAAVEKI 267
BLAST of mRNA_H-paniculata_contig16145.3543.1 vs. uniprot
Match: A0A6H5KH50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH50_9PHAE) HSP 1 Score: 152 bits (384), Expect = 6.080e-39 Identity = 72/141 (51.06%), Postives = 93/141 (65.96%), Query Frame = 1
Query: 1060 KVLGVLQVLGRGNCFDDVTQLSGMSVKTARTFFHAFCEKFVYELYDTWIKLPDGGDLKRVMAVYDGLGFTGAMRSADVTHVHWGCAPVSHSRLYTGKEKIPTLAYEMIVDHSGRVLSVITGYEGSQNDKAIVRLDKAVSKI 1482
+VL LQ+LGRGNCFDD+ QLS MS A FH FC+ F EL++ I LP G VM +YD LG TGA+ S DVTH+ WG P + R YTGKE PT+AY++ VDH+GR +++ +G+ G+ NDK I+R D V I
Sbjct: 3 QVLTALQILGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIMRYDAGVHTI 143
BLAST of mRNA_H-paniculata_contig16145.3543.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE) HSP 1 Score: 154 bits (388), Expect = 1.490e-38 Identity = 79/183 (43.17%), Postives = 103/183 (56.28%), Query Frame = 1
Query: 934 LPHPDDCFLNIMDEIEGVDGKRLWFEAGKMDVLGRPGVPIRLKVLGVLQVLGRGNCFDDVTQLSGMSVKTARTFFHAFCEKFVYELYDTWIKLPDGGDLKRVMAVYDGLGFTGAMRSADVTHVHWGCAPVSHSRLYTGKEKIPTLAYEMIVDHSGRVLSVITGYEGSQNDKAIVRLDKAVSKI 1482
+P+P E+ + + WF G+ D R G+P+ LKVLG +GNCFDDV QLS MS A+ FH FC E++D I LP G L VM ++ LG TGA S DVTH+ P + R +TGKE PT+AYE+ VDH+GR L+V G+ G NDK +R D V+KI
Sbjct: 102 VPYP------FFQELVKLSRAKRWFSPGEKDAANREGIPLELKVLG------KGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKI 272 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16145.3543.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16145.3543.1 >prot_H-paniculata_contig16145.3543.1 ID=prot_H-paniculata_contig16145.3543.1|Name=mRNA_H-paniculata_contig16145.3543.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=177bp MDEIEGVDGKRLWFEAGKMDVLGRPGVPIRLKVLGVLQVLGRGNCFDDVTback to top mRNA from alignment at H-paniculata_contig16145:3729..5912- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16145.3543.1 ID=mRNA_H-paniculata_contig16145.3543.1|Name=mRNA_H-paniculata_contig16145.3543.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2184bp|location=Sequence derived from alignment at H-paniculata_contig16145:3729..5912- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16145:3729..5912- >mRNA_H-paniculata_contig16145.3543.1 ID=mRNA_H-paniculata_contig16145.3543.1|Name=mRNA_H-paniculata_contig16145.3543.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1062bp|location=Sequence derived from alignment at H-paniculata_contig16145:3729..5912- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |