mRNA_H-paniculata_contig1614.3540.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1614.3540.1 vs. uniprot
Match: D7FWD5_ECTSI (PX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD5_ECTSI) HSP 1 Score: 781 bits (2018), Expect = 2.760e-255 Identity = 485/851 (56.99%), Postives = 535/851 (62.87%), Query Frame = 2
Query: 311 TEGRSLYFTPRETVIFGYLFDLADTDDDGLVGGADGGHAFLSRARLPPETLQRLWSEAGGGIPDACLGRPQWFVLLALVALAQAGRPCTLRDLLTDPSLAMPAPAAGPLPVHQANGARGNSGGQSSHQHQQGAHLLYHQPQHHHQQNIQQTVHMQLPLQNAQHAHSSQQQQNPVRPRPIPDF-----------------------FLDGGSPFYPA----------TRTMPPSSRKSQQTSSERGGAEGSLGDWEDASQGLDDVGEDGLEHNQGDDYHLEITVYSHRVVGEGYSSHTEYTVLANASVPGFARRELEVARRFSDFRWLHGCFKALPGVLPPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAQHPVLRRQYALQVFLEGTPRGLRAAKVLLPG------------AAACWSDTFSPSPTAVGANLTNPTLSTSPGSTPPDESGSSVRRRFSIGGADEMYGPGGGGVLVG-VGGN------IRQGQRRSVSFGASSDXXXXXXXXXASGAVVSWTGXXXXXXXXXTPWPLSVVATVGSVGYEAYGNYVATS----LTSIKGVFGAVKTKARSVVGLVAGPAPIAVEPDPVYDVEVAHVEELVGPLSGSAKIMESAAVLKRGVGYEMSRLGHYLTQVASLEDMDGFPLGVDAARGGGGAIRHRADGGRGRGGDTRGSGVGAAVTVNGGRGGAVLAKAEQVLGQRMERVATAWLEAIDQEESEFLDPLREQLGYLASAKEVHRGRGRALDALQASNASLQRNKQRLHAARAQGDAHAAAVSTAKMEKAEARMTNAQSQAALISKTFKGEAKRFHACRQAEGITAILELARAQAEFARKANAAWKQ 2695
T+GRSLYFTPRETVIFGYLFDLADTDDDGLVGG DGGHA L R+RLP TLQRLW+EAGG PD CL RPQWFVL+ALVALAQAGRPCTLRDLL + A LL RPIPDF + + PA R M ++ RGG G G E G + G + LE+TVYSHRVVGEGY SHTEYTVLANAS+PGFARRE+EVARRFSDFRWLH CF+A+PGVL PPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAQHP+L R Y QVFLEGTPRGLRAAK LLP A+A W DTFSPS G +P LS++P +TPPDESG VRRRF++GGAD+MY V G IRQGQRRSVSFGASSD G WTG S ++ V +VGYEAY NYV+TS LTSIKGV GAVKT+A+S VGL AGPAPIAVEPDP+Y+ EVA +EELV P++GS KIMESAAVLKRGVGYEMSRLGHYLTQVASLED D GV A I A G+ G G+ + GGRGG AKAEQVLGQRME++ATAWL AIDQEE +FLDPLREQLGYL SAKEVHRGRGRALDALQA NASLQRNKQRLHAARAQGDAH A+VS KME AE RMT A ++A I+KTFKGEAKRFH CR+ EG+ A+LEL+RAQA FA KANAAWKQ
Sbjct: 5 TQGRSLYFTPRETVIFGYLFDLADTDDDGLVGGNDGGHALLGRSRLPQSTLQRLWAEAGGESPDECLARPQWFVLVALVALAQAGRPCTLRDLLNTCDVVSSAXXXXXXXXXXXXXXXXXXXXXXXR-------LL----------------------------------------RPIPDFXXXXXXXXXXXXXXXXXAAVPTMIAEAAAEACPAGVGTTGANKHPRGMSGKGGRTADVPGSRGGQRGGAGASE--QSGWREEGXXXXXXXXXEGGQLEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCFQAIPGVLVPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAQHPILSRHYVFQVFLEGTPRGLRAAKALLPARVPGGCGGNNNNASAAWGDTFSPSMAGAGGTPVSPALSSTPSTTPPDESGF-VRRRFTLGGADDMYXXXXXXXXXXXVDGXXXXXXXIRQGQRRSVSFGASSDESLCNGAA-GGGQGPGWTG--------------SALSVVANVGYEAYENYVSTSVSTSLTSIKGVLGAVKTRAKSAVGLGAGPAPIAVEPDPLYEAEVARIEELVAPVAGSVKIMESAAVLKRGVGYEMSRLGHYLTQVASLEDTDSLSAGVSADE-----IDAPAAAAAAGEGEELGGGISSRHGRGGGRGGG-WAKAEQVLGQRMEKLATAWLGAIDQEECDFLDPLREQLGYLGSAKEVHRGRGRALDALQAGNASLQRNKQRLHAARAQGDAHMASVSMGKMEAAEERMTGAHTRAGQIAKTFKGEAKRFHECRRTEGVLAVLELSRAQAHFAHKANAAWKQ 784
BLAST of mRNA_H-paniculata_contig1614.3540.1 vs. uniprot
Match: A0A6H5KCW0_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCW0_9PHAE) HSP 1 Score: 798 bits (2062), Expect = 1.980e-254 Identity = 501/908 (55.18%), Postives = 548/908 (60.35%), Query Frame = 2
Query: 257 MEWP-HQSNTTTGGVFLEITEGRSLYFTPRETVIFGYLFDLADTDDDGLVGGADGGHAFLSRARLPPETLQRLWSEAGGGIPDACLGRPQWFVLLALVALAQAGRPCTLRDLLTDPSLAMPAPAAGPLPVHQANGARGNSGGQSSHQHQQGAHLLYHQPQHHHQQNIQQTVHMQLPLQNAQHAHSSQQQQNPVRPRPIPDFFLDGG-----------------SPFYPATRTMPPSSRKSQQTSSERGGAEGSLGDWEDA--SQGLDDVGEDGLEHNQGDDY------------HLEITVYSHRVVGEGYSSHTEYTVLANASVPGFARRELEVARRFSDFRWLHGCFKALPGVLPPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAQHPVLRRQYALQVFLEGTPRGLRAAKVLLPG------------AAACWSDTFSPSPTAVGANLTNPTLSTSPGSTPPDESGSSVRRRFSIGGADEMYGPGGGGVLVGVGGNIRQGQRRSVSFGASSDXXXXXXXXXASGAVVSWTGXXXXXXXXXTPWPLSVVATVGSVGYEAYGNYVATS----LTSIKGVFGAVKTKARSVVGLVAGPAPIAVEPDPVYDVEVAHVEELVGPLSGSAKIMESAAVLKRGVGYEMSRLGHYLTQVASLEDMDGFPLGVDA------------------ARGGGGAIRHRADGGRGRGGDTRGSGVGAAVTVNGGRGGAVLAKAEQVLGQRMERVATAWLEAIDQEESEFLDPLREQLGYLASAKEVHRGRGRALDALQASNASLQRNKQRLHAARAQGDAHAAAVSTAKMEKAEARMTNAQSQAALISKTFKGEAKRFHACRQAEGITAILELARAQAEFARKANAAWKQVLEDINPTDEELRQSQQRVQHPKREVRIG 2782
MEWP + SN T GG+FLE+TEGRSLYFTPRETVIFGYLFDLADTDDDGLVGG DGGHA L R+RLP TLQRLW+EAGG PD CL RPQWFVL+ALVALAQAGRPCTLRDLL + A A PLP LL RPIPDFFLDG + A P+ ++ S G G G D S+G LE+TVYSHRVVGEGY SHTEYTVLANAS+PGFARRE+EVARRFSDFRWLH CF+A+PGVL PPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAQHP+L R Y QVFLEGTPRGLRAAK LLP A+A W DTFSPS G +P LS++P +TPPDE+G VRRRF++GGAD+MY EAY NYV+TS LTSIKGV GAVKTKA+S VGL AGPAPIAVEPDP+Y+ EVA +EELV P++GS KIMESAAVLKRGVGYEMSRLGHYLTQVASLED D GV A A GGG + RH GGR G AKAEQVLGQRMER+ATAWL AIDQEES+FLDPLREQLGYL SAKEVHRGRGRALDALQA NASLQRNKQRLHAARAQGDAH A+VS KME AE RMT A ++A I+KTFKGEAKRFH CR+ EG+ A+LELARAQA FA KANAAWKQVLEDINPTD+ELR+SQ RV+ PKRE IG
Sbjct: 1 MEWPQNSSNKTGGGLFLEVTEGRSLYFTPRETVIFGYLFDLADTDDDGLVGGNDGGHALLGRSRLPQSTLQRLWAEAGGESPDECLARPQWFVLVALVALAQAGRPCTLRDLLNTCDVVSSASA--PLPXXXXXXXXXXXXXXXX----XAGRLL----------------------------------------RPIPDFFLDGXXXXXXXXXXXXXXXXVPTMIAEAAAEACPAGVETTGASKHARGMSGKAGRTADVPGSRGGQXXXXXXXXXXXXXXXXXXXXXXXXXGGQLEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCFQAIPGVLVPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAQHPILSRHYVFQVFLEGTPRGLRAAKALLPARVPGGCGGKNNNASAAWGDTFSPSMAGAGGMPVSPALSSTPSTTPPDEAGF-VRRRFTLGGADDMY--------------------------------------------------------------------------EAYENYVSTSVSTSLTSIKGVLGAVKTKAKSAVGLGAGPAPIAVEPDPLYEAEVARIEELVAPVAGSVKIMESAAVLKRGVGYEMSRLGHYLTQVASLEDTDSLSAGVSADEIDAPAAXXXXXXXXXEALGGGISSRHGRGGGRAGG----------------------WAKAEQVLGQRMERLATAWLGAIDQEESDFLDPLREQLGYLGSAKEVHRGRGRALDALQAGNASLQRNKQRLHAARAQGDAHMASVSMGKMEAAEERMTCAHTRAGQIAKTFKGEAKRFHECRRTEGVLAVLELARAQAHFAHKANAAWKQVLEDINPTDDELRESQHRVRLPKREPTIG 765
BLAST of mRNA_H-paniculata_contig1614.3540.1 vs. uniprot
Match: UPI001B88DBF2 (sorting nexin-2-like isoform X1 n=2 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88DBF2) HSP 1 Score: 78.6 bits (192), Expect = 8.000e-11 Identity = 50/131 (38.17%), Postives = 67/131 (51.15%), Query Frame = 2
Query: 1019 EHNQGDDYHLEITVYSHRVVGEGYSSHTEYTVLANASVPGFARRELEVARRFSDFRWLHGCFK---ALPGVLPPPLPPSKWAG----------SSSRDFVAERMKGLQRYMTRVAQHPVLRRQYALQVFLE 1372
E + D + +EI+V +G+G ++ Y V S+P F + EL V RRFSDF LH + A G++ PP P G S S DFV R L+RY++R AQHPVLR +Q FLE
Sbjct: 138 EEEETDQFTMEISVIDPCKMGDGMGAYMVYKVKTKTSIPAFRKPELVVTRRFSDFLGLHSRLQEKHAHLGIIVPPAPEKSVLGMTKIKMSKEESGSSDFVERRRAALERYLSRTAQHPVLRTDPDVQEFLE 268
BLAST of mRNA_H-paniculata_contig1614.3540.1 vs. uniprot
Match: A8QAA9_MALGO (PX domain-containing protein n=1 Tax=Malassezia globosa (strain ATCC MYA-4612 / CBS 7966) TaxID=425265 RepID=A8QAA9_MALGO) HSP 1 Score: 78.6 bits (192), Expect = 1.280e-10 Identity = 45/121 (37.19%), Postives = 66/121 (54.55%), Query Frame = 2
Query: 1076 VGEGYSSHTEYTVLANASVPGFARRELEVARRFSDFRWLHGCF-KALPGVLPPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAQHPVLRRQYALQVFLEGT-------PRGLRAAKVLLP 1414
VG+ ++H YTV + P FAR EL V RR+SDFRWLH PGV+ PP+P G + + V R + L+R + ++ HP+L+R L++FLE + R R +V+ P
Sbjct: 439 VGDPVTAHVVYTVRLTTNAPWFARSELSVLRRYSDFRWLHAAMVHNHPGVVVPPIPEKVKLGRFAPELVEFRRRSLERALHKILLHPMLQRDDDLKLFLESSNLSADIHDRDARKGRVITP 559
BLAST of mRNA_H-paniculata_contig1614.3540.1 vs. uniprot
Match: A0A507DH53_9FUNG (PX domain-containing protein n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DH53_9FUNG) HSP 1 Score: 72.4 bits (176), Expect = 8.210e-9 Identity = 40/112 (35.71%), Postives = 56/112 (50.00%), Query Frame = 2
Query: 1040 YHLEITVYSHRVVGEGYSSHTEYTVLANASVPGFARRELEVARRFSDFRWLHG-CFKALPGVLPPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAQHPVLRRQYALQVFLE 1372
++LEI V V + SSH YTV P F L V RR+ DF WL PG++ PP+P G DFV R L+R++ R+A HP+L + ++FL+
Sbjct: 226 WNLEICVGDPMKVSDPLSSHIVYTVKTKTECPAFRSSNLAVVRRYRDFLWLFSQLLTKYPGIVIPPVPEKHALGRFQDDFVENRRASLERFLKRIASHPILSSEDDFRLFLQ 337
BLAST of mRNA_H-paniculata_contig1614.3540.1 vs. uniprot
Match: A0A553NZU1_TIGCA (PX domain-containing protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553NZU1_TIGCA) HSP 1 Score: 72.0 bits (175), Expect = 9.320e-9 Identity = 61/199 (30.65%), Postives = 87/199 (43.72%), Query Frame = 2
Query: 896 TMPPSSRKSQQTSSERGGAEGSLGDWEDASQGLDDV--GEDGLEHNQGDDYHLEITVYSHRVVGEGYSSHTEYTVLANASVPGFARRELEVARRFSDFRWLHGCF--KALP-GVLPPPLPPSKWAGSSS-----------------------------------RDFVAERMKGLQRYMTRVAQHPVLRRQYALQVFLE 1372
T P + ++Q S G+ G W + G DD D +H +D +EITV+ VGEG S+ Y V+ + ++PGF E+ V RRFSDF +H K LP G + PP P G++ ++F+A R L+R++ RVAQHPVLRR FL+
Sbjct: 99 TRPAALLRAQSAHSAPSAQSGATGTWLHSQIGTDDTYSSPDEFDHED-EDVVMEITVHEPHKVGEGMSAFMAYRVVTHTNLPGFNGAEVSVVRRFSDFLGVHEKLREKYLPRGRIIPPAPEKSILGTTKVKIASHNGAAGGTGSLPTGTDSPGGNGSTQSSPNQKEFIARRRFALERFINRVAQHPVLRRDMIFIEFLQ 296
BLAST of mRNA_H-paniculata_contig1614.3540.1 vs. uniprot
Match: A0A210QRM8_MIZYE (Sorting nexin-2 n=4 Tax=Pectinidae TaxID=6566 RepID=A0A210QRM8_MIZYE) HSP 1 Score: 71.2 bits (173), Expect = 1.530e-8 Identity = 49/132 (37.12%), Postives = 67/132 (50.76%), Query Frame = 2
Query: 1016 LEHNQGDDYHLEITVYSHRVVGEGYSSHTEYTVLANASVPGFARRELEVARRFSDFRWLHGCFKAL---PGVLPPPLPPSKWAG----------SSSRDFVAERMKGLQRYMTRVAQHPVLRRQYALQVFLE 1372
+E NQ Y L I V + +G+G S++ Y V+ S+P F + EL V RRFSDF LH + G + PP P G S + DFV R L+R++TR AQHP+LR+ + FLE
Sbjct: 146 VEANQ---YTLVIKVTEPQKMGDGMSAYMVYKVITKTSIPDFRKPELVVLRRFSDFLGLHEKLQTRYLHQGRIVPPAPEKSVLGMTKIKMSKEESGALDFVERRRLTLERFLTRTAQHPLLRKDIDFREFLE 274
BLAST of mRNA_H-paniculata_contig1614.3540.1 vs. uniprot
Match: A0A2N1JCT6_9BASI (Vps5p n=1 Tax=Malassezia vespertilionis TaxID=2020962 RepID=A0A2N1JCT6_9BASI) HSP 1 Score: 70.9 bits (172), Expect = 2.790e-8 Identity = 39/112 (34.82%), Postives = 59/112 (52.68%), Query Frame = 2
Query: 1040 YHLEITVYSHRVVGEGYSSHTEYTVLANASVPGFARRELEVARRFSDFRWLHGCF-KALPGVLPPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAQHPVLRRQYALQVFLE 1372
Y I V + + V + SSH EYTV ++ P F R L RR+SDFRW+H + GV+ P +P G+ + V R + L+ +T++ +HP LR L +FL+
Sbjct: 368 YQFNIHVGNPQRVSDRVSSHVEYTVRVTSNAPWFPRDTLSTLRRYSDFRWMHAALVQNHAGVIVPAIPEKVKIGNMAPALVELRRRSLEHALTKILEHPALRTDEDLMLFLQ 479
BLAST of mRNA_H-paniculata_contig1614.3540.1 vs. uniprot
Match: A0A096P7L0_OSTTA (Arfaptin homology (AH) domain/BAR domain n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096P7L0_OSTTA) HSP 1 Score: 68.2 bits (165), Expect = 1.130e-7 Identity = 42/114 (36.84%), Postives = 65/114 (57.02%), Query Frame = 2
Query: 1046 LEITVYSHRVVGEGYSSHTEYTVLAN---ASVPGFARRELEVARRFSDFRWLHGCFKAL-PGVLPPPLPPSKWAGSSSR-DFVAERMKGLQRYMTRVAQHPVLRRQYALQVFLE 1372
+++TV + VG+G +++ YTV A A G+ + E V RR+SDF+WL G L PG++ PLP S + DF+ R +GL+ +M +V +HPVL + +FLE
Sbjct: 40 IDVTVTNPTKVGDGLAAYAVYTVSAKKTTADAAGYKKDESIVVRRYSDFQWLRGRLSTLFPGIVLFPLPEKTVTTSPFQSDFLEHRRRGLETFMRKVVEHPVLATCEDVVMFLE 153
BLAST of mRNA_H-paniculata_contig1614.3540.1 vs. uniprot
Match: A9UXR8_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UXR8_MONBE) HSP 1 Score: 67.4 bits (163), Expect = 1.640e-7 Identity = 42/122 (34.43%), Postives = 61/122 (50.00%), Query Frame = 2
Query: 1046 LEITVYSHRVVGEGYSSHTEYTVLANASVPGFARRELEVARRFSDFRWLHGCFKAL----PGVLPPPLPPS----------KWAGSSSRDFVAERMKGLQRYMTRVAQHPVLRRQYALQVFL 1369
LEI+V + +G+G S+ Y + ++ GFA+ EV R+SDF H +K L PG+L PP PP K G F+ +R L+R+M R+A HP+LR + FL
Sbjct: 45 LEISVSDPQRIGDGMGSYMVYNLNTKTTMKGFAQPSFEVQHRYSDF---HALYKYLVEKYPGLLVPPPPPKSAVGTGMMKFKSQGDEVTPFIEQRQFALERFMQRIAAHPILRSDDVFKTFL 163 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1614.3540.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1614.3540.1 >prot_H-paniculata_contig1614.3540.1 ID=prot_H-paniculata_contig1614.3540.1|Name=mRNA_H-paniculata_contig1614.3540.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1448bp MEWPHQSNTTTGGVFLEITEGRSLYFTPRETVIFGYLFDLADTDDDGLVGback to top mRNA from alignment at H-paniculata_contig1614:933..25349+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1614.3540.1 ID=mRNA_H-paniculata_contig1614.3540.1|Name=mRNA_H-paniculata_contig1614.3540.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=24417bp|location=Sequence derived from alignment at H-paniculata_contig1614:933..25349+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1614:933..25349+ >mRNA_H-paniculata_contig1614.3540.1 ID=mRNA_H-paniculata_contig1614.3540.1|Name=mRNA_H-paniculata_contig1614.3540.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=8688bp|location=Sequence derived from alignment at H-paniculata_contig1614:933..25349+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |