mRNA_H-paniculata_contig16135.3539.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig16135.3539.1
Unique NamemRNA_H-paniculata_contig16135.3539.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig16135.3539.1 vs. uniprot
Match: A0A0R5QMD6_SACJA (Mannose-6-phosphate isomerase n=2 Tax=Saccharina japonica TaxID=88149 RepID=A0A0R5QMD6_SACJA)

HSP 1 Score: 407 bits (1045), Expect = 7.110e-135
Identity = 251/414 (60.63%), Postives = 280/414 (67.63%), Query Frame = 1
Query:    1 QSQVAALVSRLIKNVPKPPEDCSPISPPPSKTPEEAPEPLRSVMTSIQQAEK--------------------------------------VDDG-------LTRNPSSHLGGFGPNGTG----------NAPRDFEPLEGNLN----DLWSPSNSSHSSNGNGVSSKRMESVDELNALDVLADDSASEEIFGKAFRGGRAAAAGLMTRLQREDADVQRVMLRLSKEYPGDLGILMPLMLNLLQLKPGMSFFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPPETVDACRRRYTPPINDFEIQVLQVPADEKYELEAMPVPVVMVALKGGAGGRVIERGDKSGAGGREIAACEGGVFFLPAYTPVVVCSGS-GEGIELALAHTNLHWGSLA 1062
            ++QVAALVSRL KN P       P+SPPPSK PE APEP+R  + + + A +                                      V +G       LTRN S HLGG    G G          +A    + L+  L+            S S +G+  S  R E  D+  A D LAD++ASEEIFGKAFRGG  AA  L  RLQREDAD QRVMLR SKEYPGDLGILMPLMLNLLQLKPG++FFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLP ETVDACR+RYTPPINDFEIQ+LQVPA+E+YELEAM VPVVMVAL GGA GRVIE        GREI ACEGGVFFLPAYTPVVVCSG+ G+GI++ALAHTNLHWG+LA
Sbjct:  201 RTQVAALVSRLEKNAPVV-NPGRPVSPPPSKNPERAPEPIREALIAHKAAVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXSADGCVIPAVPEGCVIGGGSLTRNASMHLGGSMRGGAGGRQAMVGTLPSAKLSHDSLDRMLDVDVGXXXXXXAVSVSGDGSESSPIRAEPGDKC-ARDTLADETASEEIFGKAFRGGPEAATRLAARLQREDADSQRVMLRPSKEYPGDLGILMPLMLNLLQLKPGLAFFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPAETVDACRKRYTPPINDFEIQILQVPANERYELEAMEVPVVMVALAGGADGRVIES-----ESGREIKACEGGVFFLPAYTPVVVCSGTKGDGIKMALAHTNLHWGTLA 607          
BLAST of mRNA_H-paniculata_contig16135.3539.1 vs. uniprot
Match: D7FPP3_ECTSI (Mannose-6-phosphate isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPP3_ECTSI)

HSP 1 Score: 372 bits (954), Expect = 2.320e-122
Identity = 226/341 (66.28%), Postives = 251/341 (73.61%), Query Frame = 1
Query:    1 QSQVAALVSRLIKNVPKP--PEDCSPISPPPSKTPEEAPEPLRSVMTSIQQAEKVDDG--------LTRNPSSHLGGFGPNG--TGNAPRDFEPLEGNLNDLWSPSNSSHSSNGNGVSSKRMESVDELNALDVLADDSASEEIFGKAFRGGRAAAAGLMTRLQREDADVQRVMLRLSKEYPGDLGILMPLMLNLLQLKPGMSFFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPPETVDACRRRYTPPINDFEIQVLQVPADEKYELEAMPVPVVMVALKGGAGGRVIERGDKSGAGGREIAACEGGVFFLPAYTPV 987
            ++QVAALVSRL KN P    P+D S  S    K  ++APEPLR V+ +   A + + G        L +NPS HLGG+   G   G AP    P  G +      S S   ++ +   S    + +   A DVLAD   SEEIFGKAFRGG  AAAGLM RLQREDAD QRVMLRLSKEYPGDLGILMPLMLNLL LKPG++FFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLP ETVDACR+RYTPPINDFEIQ+LQVPA+E+YELEAMPVPVVMVAL+GG GGRVIE         REI ACEGGVFFLPA+TPV
Sbjct:  201 RTQVAALVSRLEKNFPAEATPDDVS-ASMNGLKI-DQAPEPLREVLAAKSAAGQDNGGAVPDEQKTLNKNPSMHLGGYVFKGGEQGGAPSP-PPTLGTVPSFSVGSPSRDGADCDASVSSPPGAEERKRAEDVLADVDKSEEIFGKAFRGGPKAAAGLMARLQREDADSQRVMLRLSKEYPGDLGILMPLMLNLLHLKPGLAFFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPAETVDACRKRYTPPINDFEIQILQVPANERYELEAMPVPVVMVALEGGDGGRVIESKTD-----REIKACEGGVFFLPAFTPV 533          
BLAST of mRNA_H-paniculata_contig16135.3539.1 vs. uniprot
Match: A0A0R5QMD0_SACJA (Mannose-6-phosphate isomerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A0R5QMD0_SACJA)

HSP 1 Score: 266 bits (680), Expect = 6.970e-82
Identity = 138/226 (61.06%), Postives = 169/226 (74.78%), Query Frame = 1
Query:  382 SEEIFGKAFRGGRAAAAGLMTRLQREDADVQRVMLRLSKEYPGDLGILMPLMLNLLQLKPGMSFFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPPETVDACRRRYTPPINDFEIQVLQVPADEKYELEAMPVPVVMVALKGGAGGRVIERGDKSGAGGREIAACEGGVFFLPAYTPVVVCSGSGEGIELALAHTNLHWGSL 1059
            +E +F   FR G  AA  L  R+++E+ DV RVMLRLS EYPGDLGILMPL+LNLL LK G +FFMTVDEPHAYLRGDILE MACSNNVVR ALTPK+RDV+LLV+ML+YNM APAVL P TVD  R+R+TPP+ DFEI+ + VPA++ Y LE MPVP V+V LKG  GG +++        G+EI A  GG+FFLPA T   + SG    + +A+AHTNL+WG +
Sbjct:  250 TETMFDSRFRQGSLAAEALDKRMKKENPDVVRVMLRLSTEYPGDLGILMPLVLNLLMLKTGKAFFMTVDEPHAYLRGDILECMACSNNVVRCALTPKYRDVDLLVDMLSYNMAAPAVLHPHTVDDNRKRFTPPVADFEIEDIHVPANDVYGLEPMPVPAVLVTLKGTQGGLLLDEDT-----GKEIEAAAGGIFFLPANTHCTLVSGKLSELHIAMAHTNLNWGPM 470          
BLAST of mRNA_H-paniculata_contig16135.3539.1 vs. uniprot
Match: D8LB30_ECTSI (Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB30_ECTSI)

HSP 1 Score: 257 bits (656), Expect = 2.890e-78
Identity = 132/226 (58.41%), Postives = 164/226 (72.57%), Query Frame = 1
Query:  382 SEEIFGKAFRGGRAAAAGLMTRLQREDADVQRVMLRLSKEYPGDLGILMPLMLNLLQLKPGMSFFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPPETVDACRRRYTPPINDFEIQVLQVPADEKYELEAMPVPVVMVALKGGAGGRVIERGDKSGAGGREIAACEGGVFFLPAYTPVVVCSGSGEGIELALAHTNLHWGSL 1059
            +E++F   FR G   +  L  R++    DV RVMLRLS EYPGDLGILMPL+LNLL LK G +FFMTVDEPHAYLRGDILE MACSNNVVR ALTPKFRDV+LLV+MLTYNM APAVL P  +D  R+R+TPP++ FEI+++ VP ++ Y L  MPVP V+V L G  GG +++        G+EI A EGG+FFLPA T   + SG    + +A+AHTNL+WG +
Sbjct:  253 TEQMFEARFRQGCPTSEALDKRMKDGTPDVVRVMLRLSTEYPGDLGILMPLVLNLLMLKTGQAFFMTVDEPHAYLRGDILECMACSNNVVRCALTPKFRDVDLLVDMLTYNMAAPAVLRPHIIDDNRKRFTPPVDVFEIEMINVPGNDAYRLNPMPVPAVLVTLHGAQGGLLLDEDT-----GKEIPAAEGGIFFLPANTYCTMVSGKTSDLRIAMAHTNLNWGPM 473          
BLAST of mRNA_H-paniculata_contig16135.3539.1 vs. uniprot
Match: A0A835YY41_9STRA (Mannose-6-phosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY41_9STRA)

HSP 1 Score: 181 bits (459), Expect = 1.970e-49
Identity = 105/242 (43.39%), Postives = 151/242 (62.40%), Query Frame = 1
Query:  349 NALDVLADDSASEEIFGKAF--RGGRAAAAGL-----MTRLQREDADVQRVMLRLSKEYPGDLGILMPLMLNLLQLKPGMSFFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPPETVDACRRRYTPPINDFEIQVLQVPADEKYELEAMPVPVVMVALKGGAGGRVIERGDKSGAGGREIAACEGGVFFLPAYTPVVVCSGSGEG-IELALAHTNLHW 1050
            NA     D+   EE+ GK      G     GL     + RL+ E+  + ++MLRL++EYPGD+GI+MPL+LN L+L+PG +FFM  +EPHAYLRGDI+EVMA S+NVVR ALTPK+RDV LL ++LTY MGAP ++ P  V     R+TPP+ DFE++V+ +P  +++  +++ VP + + L GG G    + G      G E     G   F+PA   V   + S +  + +A+AHTN+HW
Sbjct:  215 NASAEAEDEVELEEMLGKVICLAAGDGECPGLTARTMLRRLRAEERSIHKLMLRLNEEYPGDIGIMMPLLLNYLRLEPGQAFFMGANEPHAYLRGDIMEVMARSDNVVRVALTPKYRDVPLLCDILTYKMGAPPLVLPRRVSPYCLRFTPPVADFELEVVTLPHAQQFSFDSIKVPSIFLVL-GGTGWATDDDG------GAEKELWSGVSMFVPARCAVNFRATSTDAPLLVAVAHTNIHW 449          
BLAST of mRNA_H-paniculata_contig16135.3539.1 vs. uniprot
Match: A0A6H5KTB4_9PHAE (Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTB4_9PHAE)

HSP 1 Score: 181 bits (459), Expect = 2.740e-49
Identity = 103/224 (45.98%), Postives = 139/224 (62.05%), Query Frame = 1
Query:  385 EEIFGKAFRGGRAAAAGLMTRLQREDADVQRVMLRLSKEYPGDLGILMPLMLNLLQLKPGMSFFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPPETVDACRRRYTPPINDFEIQVLQVPADEKYELEAMPVPVVMVALKGGAGGRVIERGDKSGAGGREIAACEGGVFFLPAYTPVVVCSGSGEGIELALAHTNLHWGS 1056
            E+I+G  +   R     ++ RL+ ED  VQ +M RLSKEYPGD+GI+MPL+LN L++  G SFFM  +EPHAYL+GDI+EVMA S+NVVR ALTPK RDV LL E+LTYNMGAP ++ P  VD C  R+TPPI DFE+  ++VP   +Y   A+PVP + + L+G            +  G R+     G V F+ A +       +G  + +   HTNL+  S
Sbjct:  247 EDIYGADYEY-REKGEMMLGRLRTEDYYVQDLMRRLSKEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDIMEVMARSDNVVRVALTPKHRDVPLLCEILTYNMGAPPIVAPIQVDQCCHRFTPPIKDFELDDMKVPEGSEYTPLAIPVPSICMVLEGVG---------SASDGVRDTVLRPGVVVFVAARSVATFKPDAGSSLRVIRTHTNLNMDS 460          
BLAST of mRNA_H-paniculata_contig16135.3539.1 vs. uniprot
Match: A0A6H5KZH6_9PHAE (Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH6_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 8.210e-46
Identity = 96/205 (46.83%), Postives = 130/205 (63.41%), Query Frame = 1
Query:  445 RLQREDADVQRVMLRLSKEYPGDLGILMPLMLNLLQLKPGMSFFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPPETVDACRRRYTPPINDFEIQVLQVPADEKYELEAMPVPVVMVALKGGAGGRVIERGDKSGAGGREIAACEGGVFFLPAYTPVVV---CSGSGEGIELALAHTNLHW 1050
            R  +ED  ++ ++LRL++EYPGD+GI+MPL+LN L++  G SFFM  +EPHAYL+GDILEVMA S+NVVR ALTPK RDV LL ++LTYNMGAP ++ P  VD C  RYTPPI DFE+  +QVP  ++Y     PV  + + + G            + AG      C G  FF+PA T VV    C      + + LA +N+++
Sbjct:  533 RRAKEDLALRELILRLAEEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQCCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAIVMAGTG---------VACAGNGTQRLCRGMAFFVPAETTVVYTNSCVAGEAALWVCLARSNINY 728          
BLAST of mRNA_H-paniculata_contig16135.3539.1 vs. uniprot
Match: A0A6H5KK22_9PHAE (Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK22_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 3.970e-45
Identity = 78/142 (54.93%), Postives = 102/142 (71.83%), Query Frame = 1
Query:  628 MACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPPETVDACRRRYTPPINDFEIQVLQVPADEKYELEAMPVPVVMVALKGGAGGRVIERGDKSGAGGREIAACEGGVFFLPAYTPVVVCSGSGEGIELALAHTNLHWG 1053
            MACSNNVVR ALTPKFRDV+LLV+ML+YNM APAVL P  +D  R+R+TPP++ FEI+++ VP ++ Y L  MPVP V+V L G  GG +++        G+EI A EGG+FFLPA T   + SG    + +A+AHTNL+WG
Sbjct:    1 MACSNNVVRCALTPKFRDVDLLVDMLSYNMAAPAVLQPHVIDDNRKRFTPPVDVFEIEMINVPGNDAYRLNPMPVPAVLVTLHGAQGGLLLDEDT-----GKEIPAAEGGIFFLPANTYCTMVSGKKSDLRIAMAHTNLNWG 137          
BLAST of mRNA_H-paniculata_contig16135.3539.1 vs. uniprot
Match: D7FIF5_ECTSI (Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIF5_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 5.880e-39
Identity = 84/179 (46.93%), Postives = 109/179 (60.89%), Query Frame = 1
Query:  523 LMPLMLNLLQLKPGMSFFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPPETVDACRRRYTPPINDFEIQVLQVPADEKYELEAMPVPVVMVALKGGAGGRVIERGDKSGAGGREIAACEGGVFFLPAYTPVVV---CSGSGEGIELALAHTNLHW 1050
            +MPL+LN L++  G SFFM  +EPHAYL+GDILEVMA S+NVVR ALTPK RDV LL ++LTYNMGAP ++ P  VD    RYTPPI DFE+  +QVP  ++Y     PV  + V + G         G      GR+   C G  FF+PA T VV    C      + + LA +N+++
Sbjct:    1 MMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQFCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAVVMAG--------TGFACAGNGRQ-RLCRGMAFFVPAETTVVYTNSCVAGEAALWVCLARSNINY 170          
BLAST of mRNA_H-paniculata_contig16135.3539.1 vs. uniprot
Match: A0A7S1TSA3_9STRA (Mannose-6-phosphate isomerase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSA3_9STRA)

HSP 1 Score: 147 bits (371), Expect = 1.990e-38
Identity = 80/198 (40.40%), Postives = 121/198 (61.11%), Query Frame = 1
Query:  457 EDADVQRVMLRLSKEYPGDLGILMPLMLNLLQLKPGMSFFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPPETVDACRRRYTPPINDFEIQVLQVPADEKYELEAMPVPVVMVALKGGAGGRVIERGDKSGAGG--REIAACEGGVFFLPAYTPVVVC-SGSGEGIELALAHTN 1041
            E+A+++++MLRL+ ++PGD G ++PL+LN L+L+PG  FFM  ++PHAY+ GDILE MACS+NVVR ALTPK+RDV  LVEMLTY  G P +     +DA  + ++PP+ + E+ +  +   E Y L A+    +++     AG  V E    +G       +    G  +F+PA   V +  +G+     +A AHTN
Sbjct:   67 EEAELRKLMLRLNAQFPGDTGAMVPLLLNYLKLEPGQGFFMGANKPHAYIAGDILETMACSDNVVRVALTPKYRDVETLVEMLTYECGVPTIDSGAAIDAHTKVFSPPVYECEVDMTSIAGAESYALRALGSCSILLVTDV-AGAVVAEAAPLAGVPHLLSRVELKVGETYFIPAGVEVTLTGAGADAACSVARAHTN 263          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16135.3539.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0R5QMD6_SACJA7.110e-13560.63Mannose-6-phosphate isomerase n=2 Tax=Saccharina j... [more]
D7FPP3_ECTSI2.320e-12266.28Mannose-6-phosphate isomerase n=2 Tax=Ectocarpus T... [more]
A0A0R5QMD0_SACJA6.970e-8261.06Mannose-6-phosphate isomerase n=1 Tax=Saccharina j... [more]
D8LB30_ECTSI2.890e-7858.41Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus s... [more]
A0A835YY41_9STRA1.970e-4943.39Mannose-6-phosphate isomerase n=1 Tax=Tribonema mi... [more]
A0A6H5KTB4_9PHAE2.740e-4945.98Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus s... [more]
A0A6H5KZH6_9PHAE8.210e-4646.83Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus s... [more]
A0A6H5KK22_9PHAE3.970e-4554.93Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus s... [more]
D7FIF5_ECTSI5.880e-3946.93Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus s... [more]
A0A7S1TSA3_9STRA1.990e-3840.40Mannose-6-phosphate isomerase n=1 Tax=Phaeomonas p... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16135contigH-paniculata_contig16135:165..4136 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score375.9
Seed ortholog evalue2e-101
Seed eggNOG ortholog2880.D7FPP3
Preferred nameMPI
KEGG rclassRC00055,RC00376,RC00523
KEGG koko:K01809,ko:K01886
KEGG ReactionR01819,R03652
KEGG Pathwayko00051,ko00520,ko00970,ko01100,ko01110,ko01130,map00051,map00520,map00970,map01100,map01110,map01130
KEGG ModuleM00114,M00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000032,GO:0001101,GO:0003006,GO:0003674,GO:0003824,GO:0004476,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006002,GO:0006013,GO:0006056,GO:0006057,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006464,GO:0006486,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0007584,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009225,GO:0009226,GO:0009259,GO:0009260,GO:0009298,GO:0009314,GO:0009416,GO:0009605,GO:0009628,GO:0009636,GO:0009642,GO:0009646,GO:0009743,GO:0009744,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010043,GO:0010154,GO:0014070,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017085,GO:0017144,GO:0018130,GO:0019309,GO:0019318,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019673,GO:0019693,GO:0019752,GO:0019852,GO:0019853,GO:0022414,GO:0031505,GO:0031506,GO:0031667,GO:0032025,GO:0032501,GO:0032502,GO:0032787,GO:0033273,GO:0033591,GO:0034284,GO:0034285,GO:0034404,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0036211,GO:0042221,GO:0042364,GO:0042493,GO:0042546,GO:0042866,GO:0043170,GO:0043412,GO:0043413,GO:0043436,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045229,GO:0046031,GO:0046034,GO:0046364,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046680,GO:0046686,GO:0046700,GO:0046939,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0061458,GO:0061611,GO:0061615,GO:0061619,GO:0070085,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071852,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901700
EggNOG free text desc.mannose-6-phosphate isomerase activity
EggNOG OGsCOG1482@1,KOG2757@2759
Ec32 ortholog descriptionMannose-6-phosphate isomerase
Ec32 orthologEc-20_000830.1
EC5.3.1.8,6.1.1.18
COG Functional cat.G
BiGG ReactioniRC1080.CRv4_Au5_s2_g9754_t1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Exons5
Model size1065
Cds size1065
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16135.3539.1prot_H-paniculata_contig16135.3539.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig16135 165..4136 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929289.637672-CDS-H-paniculata_contig16135:164..4161622929289.637672-CDS-H-paniculata_contig16135:164..416Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16135 165..416 +
1691480802.6099453-CDS-H-paniculata_contig16135:164..4161691480802.6099453-CDS-H-paniculata_contig16135:164..416Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16135 165..416 +
1622929289.650676-CDS-H-paniculata_contig16135:987..11941622929289.650676-CDS-H-paniculata_contig16135:987..1194Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16135 988..1194 +
1691480802.621235-CDS-H-paniculata_contig16135:987..11941691480802.621235-CDS-H-paniculata_contig16135:987..1194Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16135 988..1194 +
1622929289.6664178-CDS-H-paniculata_contig16135:2269..24341622929289.6664178-CDS-H-paniculata_contig16135:2269..2434Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16135 2270..2434 +
1691480802.6291697-CDS-H-paniculata_contig16135:2269..24341691480802.6291697-CDS-H-paniculata_contig16135:2269..2434Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16135 2270..2434 +
1622929289.6849823-CDS-H-paniculata_contig16135:3466..36521622929289.6849823-CDS-H-paniculata_contig16135:3466..3652Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16135 3467..3652 +
1691480802.6369052-CDS-H-paniculata_contig16135:3466..36521691480802.6369052-CDS-H-paniculata_contig16135:3466..3652Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16135 3467..3652 +
1622929289.7031195-CDS-H-paniculata_contig16135:3881..41361622929289.7031195-CDS-H-paniculata_contig16135:3881..4136Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16135 3882..4136 +
1691480802.644891-CDS-H-paniculata_contig16135:3881..41361691480802.644891-CDS-H-paniculata_contig16135:3881..4136Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16135 3882..4136 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig16135.3539.1

>prot_H-paniculata_contig16135.3539.1 ID=prot_H-paniculata_contig16135.3539.1|Name=mRNA_H-paniculata_contig16135.3539.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=355bp
QSQVAALVSRLIKNVPKPPEDCSPISPPPSKTPEEAPEPLRSVMTSIQQA
EKVDDGLTRNPSSHLGGFGPNGTGNAPRDFEPLEGNLNDLWSPSNSSHSS
NGNGVSSKRMESVDELNALDVLADDSASEEIFGKAFRGGRAAAAGLMTRL
QREDADVQRVMLRLSKEYPGDLGILMPLMLNLLQLKPGMSFFMTVDEPHA
YLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPPETV
DACRRRYTPPINDFEIQVLQVPADEKYELEAMPVPVVMVALKGGAGGRVI
ERGDKSGAGGREIAACEGGVFFLPAYTPVVVCSGSGEGIELALAHTNLHW
GSLAM
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mRNA from alignment at H-paniculata_contig16135:165..4136+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig16135.3539.1 ID=mRNA_H-paniculata_contig16135.3539.1|Name=mRNA_H-paniculata_contig16135.3539.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3972bp|location=Sequence derived from alignment at H-paniculata_contig16135:165..4136+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAATCACAGGTGGCCGCTCTTGTCAGTCGGCTGATCAAGAACGTACCCAA GCCTCCGGAGGACTGCAGTCCGATCTCCCCGCCTCCGTCAAAGACTCCCG AGGAAGCACCGGAGCCTCTTCGCAGCGTGATGACGTCGATTCAGCAGGCG GAGAAGGTGGACGATGGGCTCACCAGAAACCCGTCCAGCCATCTCGGCGG GTTCGGTCCGAACGGAACCGGCAACGCCCCGCGAGATTTCGAGCCTCTCG AGGTGTGTAATGTGCGAATTGTTTTTTTCAAGATCGAGTCAAACAAATAC ATCGGATAACGACGCAGTATCATCCACCAAACTACACGTATATTTGTAGA ATAATGGCTTTTTTAACATGCGGGGCAGAGTAAATCAGCGGTAAATACTT AGTGTCGTTCGATCGCCGAATCGTGTGTTTTGTGTTTCGGTTGACATGCT CTCAAGATAATAATAAGAAAGTTGTTTGTGTCGACCTCAATATACACACC TTTGAATGAAAAAAGTATTTGTGTCGCTCTATTTGATGTGATGCAAGTAG ATTGTTGGTTCGTTCCCAGCACGGTCACTGGGCAAACTATCCTTTCAACG AAGAAAAATCTTCAAAGGAGATTTTACCCTTGTAGGTTCTTCGACTCTCC GTGCGACCGGCTCGCTTGTGCTCTCGTAACCATGATATTGGATTAAAAAT TGTCATGATCCAACAGACGAACAGCCCCACTCTCTATTTTTCCTCTTTTC TTTGTCGCTTTCACTTCACGTGTGTGTGTGTGTTTTACAGGTAACCCAGT TGAGGGGGAGGACCTCGAGTGAGGGCAACCTCAATGATCTTTGGAGCCCC AGCAACAGCAGTCACTCCAGCAACGGTAATGGCGTGAGCAGTAAGCGCAT GGAGAGTGTGGATGAGTTGAACGCCTTGGATGTGCTCGCGGATGACTCTG CTTCTGAGGAGATCTTCGGCAAGGCGTTTAGGGGGGGACGCGCCGCGGCA GCAGGGCTCATGACGAGACTCCAGCGTGAGGTGCGGTGGAAGAGAGAGAT TGAACGGGATAGATATGTTTTGTATTTTAATTTCGGAGTTGATTGGGGTA TCATGACGGGACGAGAGTGTCGTCCTGTTGCGTCGTTTGTGTTCAGGACA GGATGAGGTCCCGTCCCATCCGTTCCAGTCGAAATACGATGAAGTTGTCA GCGACAAACCGATTGCTCCTTCCCGTAGTTTTGCTATTAATTAGCCACGC TATCTGAATCAGGCTGTAGAGCTCTATACTACCAATTTATACTCCTTCGT GTCCTAAAAATAGAAGTGATTCCGCTACTATGCTCGGATGATCCTGTTCG TTTTCTCGAGTGAGGTTCGCTGAGTTTTTGGGTTAAAATCGATGCAAAGT GACAATCTGATGGTTTGTAAGGATTATGAGGGCTGTTCCAAAGTGTTCAA CCCCCCCGGACAAAATCGAATACTTGCAACTGATTTTCTCGAAAACTGAA AATGTTTGCCGGAGTGCACGATGATGGGGCACGTGAAATGAAATGTAGCC ACCCATGTTCGTTCGATTTGCGAATACTATTAGTAGTCTTGGATGGTCCG AGGCACATGTGCACATGAGCTTATATTGACACTCAGACGAATGCTTCTTA ATCCTTGGTGAAAAAACAATTTGCAAGCATTCTTATTCGTCTGGGGGGTG GAAGTGTTGCCTGATTCGGGTATCAGGTTTTAATATGTGTTGACATCCAC GCCATGTTTGACACACGTTTCTATGTAGTACCGCGATTCGCTCCTGATCG TCAAGGTTCGGTACGGGCGGTGCTGGAATCCCCTTCAGATGATGGCGAAC AAATGATAATACGAAGCACTAGGTGCAAGCCTTGTCGAGCAGATTAGATT TTTTTTCTTTTTCTTTTCTTTTTGTTTTACTGCAAATATTAATTTCGAAT TGACTTCCAAATATTTGACCTTTTTTATTTTTTCATTTTCACTGTTCCCC TAATTACTCATAACTCACCGTCATGACTCACTATTTGCTACCCCGACCTT AATCCCATTGCGATTCAAAAAAAAAAAAATCCACGAAAAAACAATAAACA CGCAGGATGCGGACGTTCAGCGAGTGATGCTTCGCCTTTCCAAGGAATAC CCCGGAGACCTGGGCATCCTTATGCCGCTTATGCTTAACCTCTTGCAGCT GAAGCCGGGCATGTCCTTCTTCATGACCGTGGACGAGCCTCACGCCTACC TTCGCGGCGACATCCTGGAGGTGATTGAGCCGGTGTTGTGCTTGATTCAA CCCTTGAAAAACCGGACCCCGTGAGGACGAAGAGATAGATTTGCACAATG ACCAGCTGTGAATGATGACGAATACACATGAACCATCTACAGGCAGCTAC AAAGAGGGGGTCTTGATTCTTTTACCGCTTGCATACTTCTCTGCTCTATC TGGGATTTAGTGTAGATTGATATCAAGAAAACACCGGCATTTTTTGTATC GGCCAAACAACGAAAGCTTGCAAGCTCTCTGCAGCTCTTTGGAGGGTCCA AAGTTTTCCGAGAGGCTAATCCTACCTTCGTAGTAGATGGAGCCATTGCG GTCCTTTTGTTATATCGTCAACCCACGCACAACGGCTCGCTGCGCTGGTA TAAACGCTCCTGTCCATAACTGGTGATTTTACAGGGTGTTTCACATGACA AAACATTACACGTGTCTTTTCACATCGTTGATGTTATGAACCCGTCTGTG GATGACACGTGACATGTTTCATATCGCCGGATCAGTTCGAGGAAGGTCAC ATGAGAATTTGCCCCCCGGTTGGCGTATGGGGTACATGATAATTTCTTTT TGCTGCTCGGTTCGCGGATATGTACGTGTCCCATTTTCGTCCTGTTGGCG GTTGGTGATTGTGCTATCGGTGTTTTTTTTTTTTTTTTAATATATATATC CACACCCGCTCATCTTCGCACGCTCATCGATCCCCGTGATGCTACCGCGT TTCATTAGTGTACTTTGTGTGCTGACGAATCACGTAGGCATATAGACCCA GATCAGACGCCCTAGGAGAATCTGTGAATCAACGTAAGGGCGGGGGCGTG CTCATGTTCTGCATGTCTGTAGTTGTTGGGCTCGAGAGGACTGAGTTTCT TTGTCCCTATTAGTGCGATTTCTGATGGCCAATCGCTCTTTCCCACGTCG CCAAATGGTGCTCAAAAATGTTTTCCCTCCCTTACCGACTATCTACCTCA ATCCTCGCGTGTGTCTTTTGATCTCTTCCTCTTTTTGCCTCATCCTCTAC AGGTTATGGCCTGTTCCAACAACGTCGTGCGCGCTGCTCTCACGCCCAAA TTCCGTGACGTGAACCTTCTCGTGGAGATGCTCACATACAATATGGGTGC GCCCGCGGTGCTTCCCCCAGAAACCGTGGACGCTTGCCGCCGGCGCTATA CCCCACCCATCAACGACTTCGAGATTCAGGTTCTTCAGGTGAGAGGGATG GCAGCAAGGAGATGCGGTTGTGTTGCTACGATCACTGACTTTTCTTTAGC GAGCTAATTGTTTTCATCGAGGTTTGATTCCTTTTTTCGCTTTATTTCAC GCTCTATAGCTCCCCCCCCCCGCCCTTTGGTGTCCAATAACTACTGAATG CCAAATATAACTACCGCCCCTCCTCCCTTCGAACAAACGAAACGGAAAAA AAAACAAAACACAACAGGTGCCAGCGGACGAGAAGTACGAGCTGGAAGCC ATGCCTGTTCCCGTGGTGATGGTCGCTCTTAAGGGCGGCGCGGGCGGGCG CGTGATCGAGCGCGGCGACAAGTCAGGAGCAGGCGGCCGGGAGATCGCCG CTTGCGAGGGAGGTGTCTTTTTCCTCCCGGCCTACACCCCCGTCGTCGTG TGCTCGGGCTCTGGTGAGGGTATCGAGTTGGCGCTGGCTCATACGAACCT TCACTGGGGGAGCCTGGCAATG
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Coding sequence (CDS) from alignment at H-paniculata_contig16135:165..4136+

>mRNA_H-paniculata_contig16135.3539.1 ID=mRNA_H-paniculata_contig16135.3539.1|Name=mRNA_H-paniculata_contig16135.3539.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2130bp|location=Sequence derived from alignment at H-paniculata_contig16135:165..4136+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAATCACAGGTGGCCGCTCTTGTCAGTCGGCTGATCAAGAACGTACCCAA
GCCTCCGGAGGACTGCAGTCCGATCTCCCCGCCTCCGTCAAAGACTCCCG
AGGAAGCACCGGAGCCTCTTCGCAGCGTGATGACGTCGATTCAGCAGGCG
GAGAAGGTGGACGATGGGCTCACCAGAAACCCGTCCAGCCATCTCGGCGG
GTTCGGTCCGAACGGAACCGGCAACGCCCCGCGAGATTTCGAGCCTCTCG
AGCAATCACAGGTGGCCGCTCTTGTCAGTCGGCTGATCAAGAACGTACCC
AAGCCTCCGGAGGACTGCAGTCCGATCTCCCCGCCTCCGTCAAAGACTCC
CGAGGAAGCACCGGAGCCTCTTCGCAGCGTGATGACGTCGATTCAGCAGG
CGGAGAAGGTGGACGATGGGCTCACCAGAAACCCGTCCAGCCATCTCGGC
GGGTTCGGTCCGAACGGAACCGGCAACGCCCCGCGAGATTTCGAGCCTCT
CGAGGGCAACCTCAATGATCTTTGGAGCCCCAGCAACAGCAGTCACTCCA
GCAACGGTAATGGCGTGAGCAGTAAGCGCATGGAGAGTGTGGATGAGTTG
AACGCCTTGGATGTGCTCGCGGATGACTCTGCTTCTGAGGAGATCTTCGG
CAAGGCGTTTAGGGGGGGACGCGCCGCGGCAGCAGGGCTCATGACGAGAC
TCCAGCGTGAGGGCAACCTCAATGATCTTTGGAGCCCCAGCAACAGCAGT
CACTCCAGCAACGGTAATGGCGTGAGCAGTAAGCGCATGGAGAGTGTGGA
TGAGTTGAACGCCTTGGATGTGCTCGCGGATGACTCTGCTTCTGAGGAGA
TCTTCGGCAAGGCGTTTAGGGGGGGACGCGCCGCGGCAGCAGGGCTCATG
ACGAGACTCCAGCGTGAGGATGCGGACGTTCAGCGAGTGATGCTTCGCCT
TTCCAAGGAATACCCCGGAGACCTGGGCATCCTTATGCCGCTTATGCTTA
ACCTCTTGCAGCTGAAGCCGGGCATGTCCTTCTTCATGACCGTGGACGAG
CCTCACGCCTACCTTCGCGGCGACATCCTGGAGGATGCGGACGTTCAGCG
AGTGATGCTTCGCCTTTCCAAGGAATACCCCGGAGACCTGGGCATCCTTA
TGCCGCTTATGCTTAACCTCTTGCAGCTGAAGCCGGGCATGTCCTTCTTC
ATGACCGTGGACGAGCCTCACGCCTACCTTCGCGGCGACATCCTGGAGGT
TATGGCCTGTTCCAACAACGTCGTGCGCGCTGCTCTCACGCCCAAATTCC
GTGACGTGAACCTTCTCGTGGAGATGCTCACATACAATATGGGTGCGCCC
GCGGTGCTTCCCCCAGAAACCGTGGACGCTTGCCGCCGGCGCTATACCCC
ACCCATCAACGACTTCGAGATTCAGGTTCTTCAGGTTATGGCCTGTTCCA
ACAACGTCGTGCGCGCTGCTCTCACGCCCAAATTCCGTGACGTGAACCTT
CTCGTGGAGATGCTCACATACAATATGGGTGCGCCCGCGGTGCTTCCCCC
AGAAACCGTGGACGCTTGCCGCCGGCGCTATACCCCACCCATCAACGACT
TCGAGATTCAGGTTCTTCAGGTGCCAGCGGACGAGAAGTACGAGCTGGAA
GCCATGCCTGTTCCCGTGGTGATGGTCGCTCTTAAGGGCGGCGCGGGCGG
GCGCGTGATCGAGCGCGGCGACAAGTCAGGAGCAGGCGGCCGGGAGATCG
CCGCTTGCGAGGGAGGTGTCTTTTTCCTCCCGGCCTACACCCCCGTCGTC
GTGTGCTCGGGCTCTGGTGAGGGTATCGAGTTGGCGCTGGCTCATACGAA
CCTTCACTGGGGGAGCCTGGCAATGGTGCCAGCGGACGAGAAGTACGAGC
TGGAAGCCATGCCTGTTCCCGTGGTGATGGTCGCTCTTAAGGGCGGCGCG
GGCGGGCGCGTGATCGAGCGCGGCGACAAGTCAGGAGCAGGCGGCCGGGA
GATCGCCGCTTGCGAGGGAGGTGTCTTTTTCCTCCCGGCCTACACCCCCG
TCGTCGTGTGCTCGGGCTCTGGTGAGGGTATCGAGTTGGCGCTGGCTCAT
ACGAACCTTCACTGGGGGAGCCTGGCAATG
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