mRNA_H-paniculata_contig16122.3535.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16122.3535.1 vs. uniprot
Match: D8LKR2_ECTSI (Sodium/hydrogen exchanger family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKR2_ECTSI) HSP 1 Score: 217 bits (553), Expect = 2.850e-64 Identity = 112/145 (77.24%), Postives = 123/145 (84.83%), Query Frame = 1
Query: 28 SRAAVSPDVILFVFLPVLIFESAFNTDVHIFQREFWQVLTLAVPGVVLATILTASVVKYAFPYDWGWDACLMVGGMLSATDPVAVVALLKELGVSERLAVLIEGESLLNDATAIVVFIVFRDAVVGFKDSSPVSVLETAARMSLG 462
+RA V +ILFVFLP+LIFESAF TDVHIFQREFWQV+TLA PGV +ATI+TAS+VKY FPY W W+ LM+GG+LSATDPVAVVALLK+LGVSERL VLIEGESLLNDAT IVVFIVFRDA VG DSSP VL TA RMS G
Sbjct: 4 ARAGVDSQIILFVFLPILIFESAFETDVHIFQREFWQVVTLAGPGVAIATIITASIVKYVFPYGWDWNLSLMLGGILSATDPVAVVALLKDLGVSERLNVLIEGESLLNDATGIVVFIVFRDAFVGVADSSPAQVLVTAVRMSFG 148
BLAST of mRNA_H-paniculata_contig16122.3535.1 vs. uniprot
Match: A0A6H5L0H9_9PHAE (Na_H_Exchanger domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H9_9PHAE) HSP 1 Score: 174 bits (440), Expect = 1.280e-47 Identity = 91/142 (64.08%), Postives = 105/142 (73.94%), Query Frame = 1
Query: 37 AVSPDVILFVFLPVLIFESAFNTDVHIFQREFWQVLTLAVPGVVLATILTASVVKYAFPYDWGWDACLMVGGMLSATDPVAVVALLKELGVSERLAVLIEGESLLNDATAIVVFIVFRDAVVGFKDSSPVSVLETAARMSLG 462
++ P++I + LP+LIFESAF TDVHIF RE WQVL LA PGV+ ATI+ A KY FPYDW W+ CL G M SATDPVAVVAL+KELGVSERLAVLIEGESLLND T+IVVF VF DA G +S V+ R+ LG
Sbjct: 111 SMDPEIIFYALLPILIFESAFFTDVHIFLREMWQVLVLAGPGVMAATIMMAVFSKYVFPYDWDWNTCLFFGAMTSATDPVAVVALMKELGVSERLAVLIEGESLLNDGTSIVVFSVFFDASTGIGSTSVGHVVAQFVRLGLG 252
BLAST of mRNA_H-paniculata_contig16122.3535.1 vs. uniprot
Match: D7G372_ECTSI (Sodium/hydrogen exchanger family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G372_ECTSI) HSP 1 Score: 174 bits (440), Expect = 2.230e-47 Identity = 91/140 (65.00%), Postives = 104/140 (74.29%), Query Frame = 1
Query: 43 SPDVILFVFLPVLIFESAFNTDVHIFQREFWQVLTLAVPGVVLATILTASVVKYAFPYDWGWDACLMVGGMLSATDPVAVVALLKELGVSERLAVLIEGESLLNDATAIVVFIVFRDAVVGFKDSSPVSVLETAARMSLG 462
+P++I + LP+LIFESAF TDVHIF RE WQVL LA PGV+ ATI+ A KY FPYDW W+ CL G M SATDPVAVVAL+KELGVSERLAVLIEGESLLND T+IVVF VF DA G +S V+ R+ LG
Sbjct: 46 NPEIIFYALLPILIFESAFFTDVHIFLREMWQVLVLAGPGVLAATIMMAVFSKYVFPYDWDWNTCLFFGAMTSATDPVAVVALMKELGVSERLAVLIEGESLLNDGTSIVVFSVFFDASTGIGSTSVGHVVTQFVRLGLG 185
BLAST of mRNA_H-paniculata_contig16122.3535.1 vs. uniprot
Match: A0A836CH43_9STRA (Sodium/hydrogen exchanger family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH43_9STRA) HSP 1 Score: 170 bits (430), Expect = 4.930e-46 Identity = 82/142 (57.75%), Postives = 113/142 (79.58%), Query Frame = 1
Query: 40 VSPDVILFVFLPVLIFESAFNTDVHIFQREFWQVLTLAVPGVVLATILTASVVKYAFPYDWGWDACLMVGGMLSATDPVAVVALLKE-LGVSERLAVLIEGESLLNDATAIVVFIVFRDAVVGFKDSSPVSVLETAARMSLG 462
+ P+V+L VF+PVLIFESAFNTDVH+FQREFWQV+TLA PG V+A++ TA ++++ PY W W + +G +LSATDP ++VALL++ L VS+RLA IEGESLLND A+V+F++F+DA++G KDS + TAAR++LG
Sbjct: 7 IDPEVLLLVFIPVLIFESAFNTDVHVFQREFWQVVTLAGPGTVIASVFTALILQFWLPYGWSWYIGMTLGAVLSATDPPSIVALLRDQLSVSQRLAARIEGESLLNDGVAVVIFVIFKDALLGGKDSQASHIAATAARLALG 148
BLAST of mRNA_H-paniculata_contig16122.3535.1 vs. uniprot
Match: A0A7S1UK40_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UK40_9STRA) HSP 1 Score: 160 bits (404), Expect = 1.520e-42 Identity = 85/141 (60.28%), Postives = 108/141 (76.60%), Query Frame = 1
Query: 40 VSPDVILFVFLPVLIFESAFNTDVHIFQREFWQVLTLAVPGVVLATILTASVVKYAFPYDWGWDACLMVGGMLSATDPVAVVALLKELGVSERLAVLIEGESLLNDATAIVVFIVFRDAVVGFKDSSPVSVLETAARMSLG 462
+ P V+LF FLP+LIFESAF TD HIF RE QVL LAVPGV++AT+LTA +V PY++ ++A +M G MLSATDPVAVVAL+KELGVSERLA L+EGESL ND T+IV+F VFRDA+ G + + ++ R++LG
Sbjct: 90 IDPHVVLFCFLPILIFESAFGTDYHIFAREASQVLVLAVPGVIMATLLTALIVWRVLPYNFPFNASMMFGAMLSATDPVAVVALMKELGVSERLATLMEGESLFNDGTSIVLFEVFRDALTGAANRNAGELIAFFLRLALG 230
BLAST of mRNA_H-paniculata_contig16122.3535.1 vs. uniprot
Match: A0A5A8DG13_CAFRO (Cyclic nucleotide-binding domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DG13_CAFRO) HSP 1 Score: 156 bits (395), Expect = 2.500e-41 Identity = 80/124 (64.52%), Postives = 93/124 (75.00%), Query Frame = 1
Query: 34 AAVSPDVILFVFLPVLIFESAFNTDVHIFQREFWQVLTLAVPGVVLATILTASVVKYAFPYDWGWDACLMVGGMLSATDPVAVVALLKELGVSERLAVLIEGESLLNDATAIVVFIVFRDAVVG 405
A + P IL VFLP LIFESAF+ D HIF+R FWQ+ LAVPG+ + T LTA+V Y FPY W W+A LM G +L+ATDPVAVVALLKELG S++L LIEGESLLND TAIV F FR V+G
Sbjct: 86 ANIDPHTILVVFLPTLIFESAFSVDFHIFRRSFWQLFILAVPGMAIGTGLTAAVGVYLFPYQWSWEASLMFGSILAATDPVAVVALLKELGASKQLETLIEGESLLNDGTAIVAFTAFRGMVLG 209
BLAST of mRNA_H-paniculata_contig16122.3535.1 vs. uniprot
Match: A0A7S2SQN5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQN5_9STRA) HSP 1 Score: 150 bits (379), Expect = 2.510e-41 Identity = 80/145 (55.17%), Postives = 105/145 (72.41%), Query Frame = 1
Query: 40 VSPDVILFVFLPVLIFESAFNTDVHIFQREFWQVLTLAVPGVVLATILTASVVKYAFPYDWGWDACLMVGGMLSATDPVAVVALLKELGVSERLAVLIEGESLLNDATAIVVFIVFRDAVVGFKDS----SPVSVLETAARMSLG 462
VSP+VILF F+P+L+FES+F+TDVHI + E QVL LA PGV+++T LTA VKY F Y W W CL+ G M+SATDPVAVVAL K+LGV++RL LIEGE L+ND +AIV+F + A+ + + S V+ TA ++SLG
Sbjct: 131 VSPEVILFAFIPILLFESSFSTDVHIIRHEALQVLFLAGPGVIVSTFLTALFVKYVFNYGWSWTLCLLFGSMMSATDPVAVVALFKDLGVNQRLGTLIEGEGLMNDGSAIVIFNICLAAIEKRRTNNAGLSAGDVVTTALQLSLG 275
BLAST of mRNA_H-paniculata_contig16122.3535.1 vs. uniprot
Match: F0Y140_AURAN (Na_H_Exchanger domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y140_AURAN) HSP 1 Score: 154 bits (390), Expect = 6.570e-41 Identity = 81/119 (68.07%), Postives = 93/119 (78.15%), Query Frame = 1
Query: 43 SPDVILFVFLPVLIFESAFNTDVHIFQREFWQVLTLAVPGVVLATILTASVVKYAFP-YDWGWDACLMVGGMLSATDPVAVVALLKELGVSERLAVLIEGESLLNDATAIVVFIVFRDA 396
+P VIL+ F+P+L+FESAF TD HIF R+ WQ+LTLA PGV++A+ILT VK F Y W W LM G M+SATDPVAVVALLKELGVSERL LIEGESLLND TAIVVF VF+ A
Sbjct: 59 TPQVILYCFVPILVFESAFMTDTHIFSRQKWQILTLAGPGVLVASILTGGFVKAVFTDYGWDWPTVLMFGAMMSATDPVAVVALLKELGVSERLGTLIEGESLLNDGTAIVVFDVFKHA 177
BLAST of mRNA_H-paniculata_contig16122.3535.1 vs. uniprot
Match: A0A1Y5DAQ5_9GAMM (Peptidase (Fragment) n=1 Tax=Bermanella sp. 47_1433_sub80_T6 TaxID=1856278 RepID=A0A1Y5DAQ5_9GAMM) HSP 1 Score: 147 bits (372), Expect = 9.550e-41 Identity = 74/123 (60.16%), Postives = 95/123 (77.24%), Query Frame = 1
Query: 34 AAVSPDVILFVFLPVLIFESAFNTDVHIFQREFWQVLTLAVPGVVLATILTASVVKYAFPYDWGWDACLMVGGMLSATDPVAVVALLKELGVSERLAVLIEGESLLNDATAIVVFIVFRDAVV 402
A ++P +IL++FLP+LIFESAF +VH+F+R F Q+ LAVPG+++AT +TA +VKY FP+DW W C M G ++SATDPVAVVALLKEL +RL LIEGESL ND TAIV F++F VV
Sbjct: 69 ADINPHLILWLFLPILIFESAFALEVHLFRRIFSQIALLAVPGLMVATAITAVLVKYIFPWDWSWPVCFMFGALISATDPVAVVALLKELSSRKRLETLIEGESLFNDGTAIVFFMLFLGMVV 191
BLAST of mRNA_H-paniculata_contig16122.3535.1 vs. uniprot
Match: A0A4V1INN1_9GAMM (Peptidase n=4 Tax=Zooshikella TaxID=202771 RepID=A0A4V1INN1_9GAMM) HSP 1 Score: 154 bits (389), Expect = 1.320e-40 Identity = 78/141 (55.32%), Postives = 104/141 (73.76%), Query Frame = 1
Query: 34 AAVSPDVILFVFLPVLIFESAFNTDVHIFQREFWQVLTLAVPGVVLATILTASVVKYAFPYDWGWDACLMVGGMLSATDPVAVVALLKELGVSERLAVLIEGESLLNDATAIVVFIVFRDAVVGFKDSSPVSVLETAARMS 456
A V P +ILF+FLP L+FESAF+ +VH+F+R F Q+ LAVPG+V+AT LTAS+ K+ FP+DW W CLM G ++SATDPVAVVALLKE+ +RL L+EGESLLND TAIV+F +F V+ + S +S++ A +
Sbjct: 69 AGVDPHLILFLFLPTLVFESAFSLEVHLFRRIFAQIALLAVPGLVIATTLTASLAKWMFPWDWSWALCLMFGALISATDPVAVVALLKEVSSRKRLETLLEGESLLNDGTAIVLFTLFFGWVISSQASQQISLVSLTANFT 209 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16122.3535.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16122.3535.1 >prot_H-paniculata_contig16122.3535.1 ID=prot_H-paniculata_contig16122.3535.1|Name=mRNA_H-paniculata_contig16122.3535.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=154bp MLFFFLLFFSRAAVSPDVILFVFLPVLIFESAFNTDVHIFQREFWQVLTLback to top mRNA from alignment at H-paniculata_contig16122:3337..4918+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16122.3535.1 ID=mRNA_H-paniculata_contig16122.3535.1|Name=mRNA_H-paniculata_contig16122.3535.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1582bp|location=Sequence derived from alignment at H-paniculata_contig16122:3337..4918+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16122:3337..4918+ >mRNA_H-paniculata_contig16122.3535.1 ID=mRNA_H-paniculata_contig16122.3535.1|Name=mRNA_H-paniculata_contig16122.3535.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=924bp|location=Sequence derived from alignment at H-paniculata_contig16122:3337..4918+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |