mRNA_H-paniculata_contig16030.3502.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16030.3502.1 vs. uniprot
Match: A0A6H5JAJ0_9PHAE (OHCU_decarbox domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAJ0_9PHAE) HSP 1 Score: 166 bits (421), Expect = 2.180e-50 Identity = 88/108 (81.48%), Postives = 98/108 (90.74%), Query Frame = 1
Query: 1 LEAFAAHPAIGDKSALREKFALSRSGWEAEEQAASAGASEAVLDELTELNRSYREKHGFVFLVCASGKPANEILALLKARLPNNRETEIKNAAEEQRKITQLRFTRLL 324
LEA AAHPAIGDK ALR+KFA SRSGWE +EQAA+AGASEAVLDEL+ELN YR+K+GFVFLVCASG PA+ ILALLKARLPN+R+TEI+NA EEQRKITQLRF RLL
Sbjct: 58 LEAVAAHPAIGDKQALRDKFAPSRSGWEDKEQAAAAGASEAVLDELSELNEEYRQKNGFVFLVCASGMPADAILALLKARLPNDRDTEIRNAVEEQRKITQLRFARLL 165
BLAST of mRNA_H-paniculata_contig16030.3502.1 vs. uniprot
Match: C1E536_MICCC (OHCU_decarbox domain-containing protein n=2 Tax=Micromonas TaxID=38832 RepID=C1E536_MICCC) HSP 1 Score: 110 bits (276), Expect = 9.840e-29 Identity = 58/105 (55.24%), Postives = 76/105 (72.38%), Query Frame = 1
Query: 7 AFAAHPAIGDKSALREKFALSRSGWEAEEQAASAGASEAVLDELTELNRSYREKHGFVFLVCASGKPANEILALLKARLPNNRETEIKNAAEEQRKITQLRFTRL 321
AF AHP IGD S L+EKFA + S E E+ AA A +A ++EL E N+ Y EK G VFL+CASGKPA+ ILA LK R PN ++ E++NAA+EQ+KIT++R +L
Sbjct: 54 AFKAHPRIGDVSKLKEKFASTASWCEGEQSAAQASMDDATINELAEWNKRYEEKFGRVFLICASGKPAHVILAALKERYPNEQDVELRNAADEQQKITEIRLEKL 158
BLAST of mRNA_H-paniculata_contig16030.3502.1 vs. uniprot
Match: A0A318C320_9GAMM (OHCU_decarbox domain-containing protein n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A318C320_9GAMM) HSP 1 Score: 109 bits (272), Expect = 5.180e-28 Identity = 63/108 (58.33%), Postives = 79/108 (73.15%), Query Frame = 1
Query: 1 LEAFAAHPAIGDKSALREKFALSRSGWEAEEQAASAGASEAVLDELTELNRSYREKHGFVFLVCASGKPANEILALLKARLPNNRETEIKNAAEEQRKITQLRFTRLL 324
LEAFA HP IGD ++LREK+A +R G A EQ+A A A E VL +L N++Y +KHGF+F+V A+GK A E+LALL RLPN+ E EI NAA EQRKIT LR ++ L
Sbjct: 60 LEAFAGHPMIGDVNSLREKYADTR-GLAASEQSAVAAAQEEVLQQLAAGNQAYLDKHGFIFIVFATGKSAEEMLALLNDRLPNSTEEEIVNAAREQRKITALRLSKWL 166
BLAST of mRNA_H-paniculata_contig16030.3502.1 vs. uniprot
Match: A0A4Q5NTB6_9BACT (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=1 Tax=bacterium TaxID=1869227 RepID=A0A4Q5NTB6_9BACT) HSP 1 Score: 108 bits (271), Expect = 6.590e-28 Identity = 58/108 (53.70%), Postives = 80/108 (74.07%), Query Frame = 1
Query: 1 LEAFAAHPAIGDKSALREKFALSRSGWEAEEQAASAGASEAVLDELTELNRSYREKHGFVFLVCASGKPANEILALLKARLPNNRETEIKNAAEEQRKITQLRFTRLL 324
LEAFA HP IGD +LR KFA + S W EQA + ASEA L L + N Y +K GF+F++CA+GK A+E+LA+L+ RL N++ETE++NAAE+Q++IT+LR +LL
Sbjct: 64 LEAFAHHPKIGDIDSLRSKFATT-STWAGNEQAGTNAASEATLQALAQGNTDYEDKFGFIFIICATGKSADEMLAVLQTRLNNDKETELQNAAEQQKQITRLRLGKLL 170
BLAST of mRNA_H-paniculata_contig16030.3502.1 vs. uniprot
Match: A0A5B7ZZN0_9BACT (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=2 Tax=Hymenobacter TaxID=89966 RepID=A0A5B7ZZN0_9BACT) HSP 1 Score: 108 bits (270), Expect = 8.390e-28 Identity = 63/107 (58.88%), Postives = 77/107 (71.96%), Query Frame = 1
Query: 4 EAFAAHPAIGDKSALREKFALSRSGWEAEEQAASAGASEAVLDELTELNRSYREKHGFVFLVCASGKPANEILALLKARLPNNRETEIKNAAEEQRKITQLRFTRLL 324
EAF HP IGD SAL+EKFA S S W A EQ A AS+ VL++L E N Y EK G++F+VCA+GK A E+LALL+ARLPN+ ETEI A EQ KIT++R +LL
Sbjct: 61 EAFTHHPKIGDASALKEKFA-STSAWAAGEQGAVKQASQQVLEDLAEGNWRYEEKFGYIFIVCATGKSAEEMLALLQARLPNSPETEIHIAMGEQDKITKIRLEKLL 166
BLAST of mRNA_H-paniculata_contig16030.3502.1 vs. uniprot
Match: UPI0003826855 (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=1 Tax=Hahella ganghwensis TaxID=286420 RepID=UPI0003826855) HSP 1 Score: 108 bits (269), Expect = 1.130e-27 Identity = 60/108 (55.56%), Postives = 79/108 (73.15%), Query Frame = 1
Query: 1 LEAFAAHPAIGDKSALREKFALSRSGWEAEEQAASAGASEAVLDELTELNRSYREKHGFVFLVCASGKPANEILALLKARLPNNRETEIKNAAEEQRKITQLRFTRLL 324
LEAF HP IGD ++LR K+A +++ AE+ SA A+E L L E N +Y EK GF+F+VCA+GK A E+L LL RLPN+RETE++NAAEEQRKITQ+R +L+
Sbjct: 60 LEAFEGHPKIGDVNSLRAKYANTKALAGAEQSGVSA-ATEQTLQALAEGNTAYEEKFGFIFIVCATGKSAEEMLELLNQRLPNDRETELRNAAEEQRKITQIRLGKLV 166
BLAST of mRNA_H-paniculata_contig16030.3502.1 vs. uniprot
Match: UPI001C603507 (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=1 Tax=Mucilaginibacter sp. HMF5004 TaxID=2857527 RepID=UPI001C603507) HSP 1 Score: 107 bits (268), Expect = 1.640e-27 Identity = 60/107 (56.07%), Postives = 78/107 (72.90%), Query Frame = 1
Query: 1 LEAFAAHPAIGDKSALREKFALSRSGWEAEEQAASAGASEAVLDELTELNRSYREKHGFVFLVCASGKPANEILALLKARLPNNRETEIKNAAEEQRKITQLRFTRL 321
LEAF HP IGDKS+L+EKFA + S W + EQ+ AS+ V+D L + N Y +K GF+F+VCA+GK A E+L+LL ARLPN+ E EI+ AAEEQ KIT +R T+L
Sbjct: 60 LEAFTHHPKIGDKSSLKEKFATTAS-WASNEQSGVNSASDDVIDALAKGNDDYYKKFGFIFIVCATGKSAEEMLSLLMARLPNDPEKEIRIAAEEQGKITAIRLTKL 165
BLAST of mRNA_H-paniculata_contig16030.3502.1 vs. uniprot
Match: A0A6G8DA25_9GAMM (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=2 Tax=Microbulbifer TaxID=48073 RepID=A0A6G8DA25_9GAMM) HSP 1 Score: 107 bits (267), Expect = 2.200e-27 Identity = 63/107 (58.88%), Postives = 75/107 (70.09%), Query Frame = 1
Query: 1 LEAFAAHPAIGDKSALREKFALSRSGWEAEEQAASAGASEAVLDELTELNRSYREKHGFVFLVCASGKPANEILALLKARLPNNRETEIKNAAEEQRKITQLRFTRL 321
LEAFAAHP IGD L EKFA + G Q A A AS L+EL LNR Y E GF+F+VCASGKPA E+LA +K+R+ N+RE EI+NAA+EQ KITQLR +L
Sbjct: 63 LEAFAAHPRIGDLQRLHEKFASAEQG-----QVALADAS--TLEELRRLNRVYFETFGFIFIVCASGKPAREMLAAIKSRIANSREQEIRNAADEQAKITQLRLGQL 162
BLAST of mRNA_H-paniculata_contig16030.3502.1 vs. uniprot
Match: UPI001688EFCA (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=1 Tax=Spirosoma profusum TaxID=2771354 RepID=UPI001688EFCA) HSP 1 Score: 107 bits (266), Expect = 3.370e-27 Identity = 59/107 (55.14%), Postives = 79/107 (73.83%), Query Frame = 1
Query: 4 EAFAAHPAIGDKSALREKFALSRSGWEAEEQAASAGASEAVLDELTELNRSYREKHGFVFLVCASGKPANEILALLKARLPNNRETEIKNAAEEQRKITQLRFTRLL 324
EAF+ HP IGD +LR KFA +RS W + EQA + ASE VL++L + NR Y EK G++F+VCA+GK A E+LA+L++RLPN E EI AA+EQ KIT++R +LL
Sbjct: 61 EAFSHHPKIGDVDSLRVKFANTRS-WASGEQAGVSAASEDVLEQLADGNRQYEEKFGYIFIVCATGKSAEEMLAILRSRLPNRPEDEILLAAQEQDKITRIRLKKLL 166
BLAST of mRNA_H-paniculata_contig16030.3502.1 vs. uniprot
Match: W5YVP1_9GAMM (OHCU decarboxylase n=2 Tax=Marinobacter TaxID=2742 RepID=W5YVP1_9GAMM) HSP 1 Score: 106 bits (265), Expect = 4.520e-27 Identity = 58/107 (54.21%), Postives = 80/107 (74.77%), Query Frame = 1
Query: 1 LEAFAAHPAIGDKSALREKFALSRSGWEAEEQAASAGASEAVLDELTELNRSYREKHGFVFLVCASGKPANEILALLKARLPNNRETEIKNAAEEQRKITQLRFTRL 321
L+AF AHP IGD +LR+K+A +++ + EQA + GA E VL L + N +Y +K GF+F+VCA+GK A+E+LALL+ARLPN RE E+KNAA EQ KIT++R +L
Sbjct: 60 LQAFEAHPQIGDVDSLRKKYASTKA-LASGEQAGARGADEDVLQRLKQGNDTYLDKFGFIFIVCATGKSADEMLALLEARLPNGREMELKNAAREQAKITEIRLEKL 165 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16030.3502.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16030.3502.1 >prot_H-paniculata_contig16030.3502.1 ID=prot_H-paniculata_contig16030.3502.1|Name=mRNA_H-paniculata_contig16030.3502.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=108bp LEAFAAHPAIGDKSALREKFALSRSGWEAEEQAASAGASEAVLDELTELNback to top mRNA from alignment at H-paniculata_contig16030:856..2421+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16030.3502.1 ID=mRNA_H-paniculata_contig16030.3502.1|Name=mRNA_H-paniculata_contig16030.3502.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1566bp|location=Sequence derived from alignment at H-paniculata_contig16030:856..2421+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16030:856..2421+ >mRNA_H-paniculata_contig16030.3502.1 ID=mRNA_H-paniculata_contig16030.3502.1|Name=mRNA_H-paniculata_contig16030.3502.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=648bp|location=Sequence derived from alignment at H-paniculata_contig16030:856..2421+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |