mRNA_H-paniculata_contig1601.3491.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1601.3491.1
Unique NamemRNA_H-paniculata_contig1601.3491.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig1601.3491.1 vs. uniprot
Match: D8LRM3_ECTSI (FkbM n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM3_ECTSI)

HSP 1 Score: 197 bits (502), Expect = 2.090e-56
Identity = 100/154 (64.94%), Postives = 121/154 (78.57%), Query Frame = 2
Query:  209 KLMEDPNGMVFEYLDEQETEFLYEEVFVRRSYLQHGLVVQDGAVVVDAGANVGLFSLQCLQEAKGVQVYAFEPIPALYEVLVKNLHSVK--PVIAGVCPKPVVLRVALGAEQDQQLFTYFDTDPGESTRHPKEREEQRRTLQADAGAKSWREAM 664
            KL+ED  G +FEYL + E EFLYEEVFVRR Y QHG+ V++GAVVVDAGAN+GLFSLQCL+EAKGVQV+AFEPIP +Y+VLV+NL +    PV  G CPKPV LRVALGAEQ ++ F +F  +PGESTRH  ER EQ++ L+AD  A SWR  +
Sbjct:    6 KLLEDLQGTMFEYLHQDEAEFLYEEVFVRRCYFQHGIRVEEGAVVVDAGANIGLFSLQCLREAKGVQVFAFEPIPVIYDVLVRNLFNASSGPVKEGTCPKPVALRVALGAEQAEEEFYFFRDNPGESTRHRGERGEQQQALEADVDAASWRRVV 159          
BLAST of mRNA_H-paniculata_contig1601.3491.1 vs. uniprot
Match: A0A7S4RML8_9DINO (Hypothetical protein (Fragment) n=2 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4RML8_9DINO)

HSP 1 Score: 151 bits (381), Expect = 8.290e-37
Identity = 122/378 (32.28%), Postives = 173/378 (45.77%), Query Frame = 2
Query:  212 LMEDPNGMVFEYLDEQETEFLYEEVFVRRSYLQHGLVVQDGAVVVDAGANVGLFSLQCLQEAKGVQVYAFEPIPALYEVLVKNLHSVKPVIAGVCPKPV------VLRVALGAEQ-----------DQQLFTYFDTDPGESTRHPKEREEQRRTLQADAGAKSWREAMVTAGEVEDETSITKARDRGAVARTPKTDTDLGECDQQRVLGEGESLLQRPVQDSMLIERPVGKRGSEPGDGEEVGHEAEDKKRCGVHNTENHSEGEGSRGGQSVLCNVVPLSLALHQLGIAAVDLLKVDVEGDELAVLQGISSNDWPNIRQVTVEVHDVDGRLATIVDLLRSATVGFNEVCWEAQTTSEVDGYVMVVPTALRMFLVFAKR 1294
            + E P+G++FE++DE E EFLYEE+F RR Y     +     ++VDAGAN+GLF+L  L+E    Q+  FEP+P +  VL +NL + +    G   +P+      VL+VALGA                 F Y+   PGESTRH +E                                   AR R  +AR  +                  + L+RP        RP G+R +E             + RC V +     E    + G+   C++               DLLKVDVEGDE AVL GI+++DWP ++QV +EVHDV+GRL  ++++LR A  G   +  E Q  S    Y+  VP +LR+F V A R
Sbjct:   33 ISETPDGLIFEHIDEGEAEFLYEEIFTRRCYEPLVPLTSKQPLIVDAGANIGLFALWALREWPSAQILCFEPLPPVTAVLRRNLRA-QAGCGGAAGRPLPPPSTSVLQVALGAGDCGASXXXXXXXXXAWFEYYPWAPGESTRHVEE----------------------------------AARQRTLLARAARA-----------------AGLKRPP-------RPPGRRRAE-------------RHRCTVCSLSQALEAALPQSGEGAPCDI---------------DLLKVDVEGDEEAVLLGIAASDWPRVQQVAMEVHDVNGRLDRVLEVLRRA--GLRRLHVERQRPSTDGSYLSFVPRSLRLFHVRAAR 321          
BLAST of mRNA_H-paniculata_contig1601.3491.1 vs. uniprot
Match: UPI0004C4DD81 (FkbM family methyltransferase n=1 Tax=Streptomyces sp. NRRL F-5630 TaxID=1463864 RepID=UPI0004C4DD81)

HSP 1 Score: 124 bits (310), Expect = 3.420e-28
Identity = 106/344 (30.81%), Postives = 146/344 (42.44%), Query Frame = 2
Query:  260 ETEFLYEEVFVRRSYLQHGLVVQDGAVVVDAGANVGLFSLQCLQEAKGVQVYAFEPIPALYEVLVKNLHSVKPVIAGVCPKPVVLRVALGAEQDQQL-FTYFDTDPGESTRHPKEREEQRRTLQADAGAKSWREAMVTAGEVEDETSITKARDRGAVARTPKTDTDLGECDQQRVLGEGESLLQRPVQDSMLIERPVGKRGSEPGDGEEVGHEAEDKKRCGVHNTENHSEGEGSRGGQSVLCNVVPLSLALHQLGIAAVDLLKVDVEGDELAVLQGISSNDWPNIRQVTVEVHDVDGRLATIVDLLRSATVGFNEVCWEAQTTSEVDGYVMVVPTALRMFLVFA 1288
            E  F+Y EVFV R YLQHG+ +   A VVD GANVG+FSL  ++E    +V A EPIP +++ L++NL        G     VV R ALG  +++++ FTYF   PG STRHP+E+E  +R ++   G ++    +   G VE E  + +  D                     VL E E             E P+                                                              DLLK+DVEG EL VL+G+  +DW  IRQ  +EV D+DGRL TIV +L +   GF  V   A            +P  LR ++V+A
Sbjct:   27 EMHFIYNEVFVERDYLQHGIHLPGSARVVDVGANVGMFSLFVVEECPDARVLALEPIPDIHQALLRNLSG-----CGSADVSVV-RAALGRRREERVSFTYFPALPGNSTRHPEEKELNKRLVEEQFGPEAVERVL---GAVEVEADVLRLSD---------------------VLREWEP------------EGPI--------------------------------------------------------------DLLKIDVEGSELEVLEGLDDSDWRRIRQCVIEVQDLDGRLETIVSMLGAR--GFTVVTERAGN----------IPDVLRHWMVYA 254          
BLAST of mRNA_H-paniculata_contig1601.3491.1 vs. uniprot
Match: UPI0016855CB6 (FkbM family methyltransferase n=2 Tax=Nostoc TaxID=1177 RepID=UPI0016855CB6)

HSP 1 Score: 120 bits (301), Expect = 4.350e-27
Identity = 95/360 (26.39%), Postives = 150/360 (41.67%), Query Frame = 2
Query:  224 PNGMVFEYLDEQETEFLYEEVFVRRSYLQHGLVVQDGAVVVDAGANVGLFSLQCLQEAKGVQVYAFEPIPALYEVLVKN--LHSVKPVIAGVCPKPVVLRVALGAEQ-DQQLFTYFDTDPGESTRHPKEREEQRRTLQADAGAKSWREAMVTAGEVEDETSITKARDRGAVARTPKTDTDLGECDQQRVLGEGESLLQRPVQDSMLIERPVGKRGSEPGDGEEVGHEAEDKKRCGVHNTENHSEGEGSRGGQSVLCNVVPLSLALHQLGIAAVDLLKVDVEGDELAVLQGISSNDWPNIRQVTVEVHDVDGRLATIVDLLRSATVGFNEVCWEAQTTSEVDGYVMVVPTALRMFLVFAKR 1294
            PN +    L ++ETE++Y+E+F+ + YLQHG+ + DG  +VD GAN+GLFS+   Q  K +++ AFEP+  ++EVL  N  LHS+  +         +    LG+E   + +FT++    G ST  P E+                                                                 L QR V D  L +  V                                  E     Q V   +  LS  ++ L I ++DLLK+DVEG+E  VL+GI+ +DW  I+Q+ +EVHDV+ R++ I  LL            E+Q    +  +  ++P  L++F ++A R
Sbjct:    7 PNNLEIYCLGKEETEYIYQEIFIEQQYLQHGITINDGDCIVDVGANIGLFSIFLSQLHKSLKILAFEPVQPIFEVLQANVNLHSLDNIS--------LQNYGLGSENISETVFTFYPNMAGNSTTRPLEK-----------------------------------------------------------------LAQREVMDQALNQDMV----------------------------------EYLFQSQEVKGEIKTLSSVINSLAIESIDLLKIDVEGEEYEVLRGINQDDWTKIKQIVLEVHDVEDRISQIKTLL------------ESQNFQIIVEHNNLIPPTLKIFNLYAVR 247          
BLAST of mRNA_H-paniculata_contig1601.3491.1 vs. uniprot
Match: A0A101SVT2_9ACTN (Methyltransf_21 domain-containing protein n=1 Tax=Streptomyces bungoensis TaxID=285568 RepID=A0A101SVT2_9ACTN)

HSP 1 Score: 119 bits (299), Expect = 1.030e-26
Identity = 102/338 (30.18%), Postives = 144/338 (42.60%), Query Frame = 2
Query:  260 ETEFLYEEVFVRRSYLQHGLVVQDGAVVVDAGANVGLFSLQCLQEAKGVQVYAFEPIPALYEVLVKNL--HSVKPVIAGVCPKPVVLRVALGAEQDQQL-FTYFDTDPGESTRHPKEREEQRRTLQADAGAKSWREAMVTAGEVEDETSITKARDRGAVARTPKTDTDLGECDQQRVLGEGESLLQRPVQDSMLIERPVGKRGSEPGDGEEVGHEAEDKKRCGVHNTENHSEGEGSRGGQSVLCNVVPLSLALHQLGIAA-VDLLKVDVEGDELAVLQGISSNDWPNIRQVTVEVHDVDGRLATIVDLLRSATVGFNEVCWEAQTTSEVDGYVMVVPT 1261
            E +F+Y E+FV R+YL+HG+ + D A +VDAGANVGLFSL   +E  G  + AFEPIP +++ L++NL  H  K V         V+R ALG + ++++ FT++   PG STR+P                                                          +Q+ +G+  ++ Q                         +G EA D+   GV                 V   V  LS AL        VDLLK+DVEG EL V++G+ + DW  +RQ  VEV D+DGRL  +  +L +   GF      A    EV  Y MV  T
Sbjct:   27 EVDFIYNEIFVERAYLKHGIRLSDSARIVDAGANVGLFSLFVKREFPGASILAFEPIPTIHQALLENLDSHGAKDV--------EVVRAALGRQPEERVRFTFYPALPGNSTRYP----------------------------------------------------------EQKKVGQELTVAQ-------------------------IGQEAVDRIMAGV----------------EVEAEVRRLSDALRDWAPEGPVDLLKIDVEGAELEVMEGLEAADWRRVRQSVVEVQDLDGRLDAVRGILEAQ--GFTVTVEGAANLPEVFRYSMVYAT 255          
BLAST of mRNA_H-paniculata_contig1601.3491.1 vs. uniprot
Match: UPI00180A2E1F (Amino acid adenylation domain-containing protein n=1 Tax=Anabaena sp. TaxID=1167 RepID=UPI00180A2E1F)

HSP 1 Score: 127 bits (318), Expect = 1.400e-26
Identity = 96/318 (30.19%), Postives = 138/318 (43.40%), Query Frame = 2
Query:  224 PNGMVFEYLDEQETEFLYEEVFVRRSYLQHGLVVQDGAVVVDAGANVGLFSLQCLQEAKGVQVYAFEPIPALYEVLVKNLHSVKPVIAGVCPKPVVLRVALGAEQDQQLFTYFDTDPGESTRHPKEREEQRRTLQADAGAKSWREAMVTAGEVEDETSITKARDRGAVARTPKTDTDLGECDQQRVLGEGESLLQRPVQDSMLIERPVGKRGSEPGDGEEVGHEAEDKKRCGVHNTENHSEGEGSRGGQSVLCNVVPLSLALHQLGIAAVDLLKVDVEGDELAVLQGISSNDWPNIRQVTVEVHDVDGRLATIVDLLR 1177
            PNGM   +L++ ETEF+Y+E+FV  SYL+HG+ +QDG  + D GAN+GLFSL   Q  +  ++YAFEPIP ++EVL  N       + G+     +    L +E     FTY+      S R                           A EVE+  +I        VA +   D D+                     D +L ER   +R +                                       C +  +S  + + GI  +DLLK+D E  E+ VL GI + DWP I+Q+ VEVHD+DG+LA I +LL+
Sbjct:  967 PNGMTIAHLNQNETEFVYQEIFVEESYLRHGITIQDGDRIFDVGANIGLFSLFVNQHCQNCEIYAFEPIPPVFEVLRLNSE-----LYGL--NVHLFECGLSSEVRVAEFTYYPNVSVISGRF--------------------------ANEVEERETIKSFLLNQTVALS---DQDI---------------------DELLTERLTNQRFT---------------------------------------CQLNTISHVIQEHGIPQIDLLKIDAEKSEMEVLAGIKNEDWPKIKQIVVEVHDIDGQLAIITNLLK 1188          
BLAST of mRNA_H-paniculata_contig1601.3491.1 vs. uniprot
Match: UPI001684431A (FkbM family methyltransferase n=2 Tax=Cyanobacteria TaxID=1117 RepID=UPI001684431A)

HSP 1 Score: 118 bits (296), Expect = 2.060e-26
Identity = 91/361 (25.21%), Postives = 152/361 (42.11%), Query Frame = 2
Query:  224 PNGMVFEYLDEQETEFLYEEVFVRRSYLQHGLVVQDGAVVVDAGANVGLFSLQCLQEAKGVQVYAFEPIPALYEVLVKN--LHSVKPVIAGVCPKPVVLRVALGAEQ-DQQLFTYFDTDPGESTRHPKEREEQRRTLQADAGAKSWREAMVTAGEVEDETSITKARDRGAVARTPKTDTDLGECDQQRVLGEGESLLQRPVQDSMLIERPVGKRGSEPGDGEEVGHEAEDKKRCGVHNTENHSEGEGSRGGQSVLCNVVPLSLALHQLGIAAVDLLKVDVEGDELAVLQGISSNDWPNIRQVTVEVHDVDGRLATIVDLLRSATVGFNEVCWEAQTTSEVDGYVMVVPTALRMFLVFAKRR 1297
            PN +   YL ++ETE++Y+E+F+++ YLQHG+ + DG  + D GAN+GLFS+   +  K +++ AFEPI  ++EVL  N  LHS++ +         +    LG+E   +  FT++      ST  P E+ EQR  +                                                           L + + + +                                              Q V   +  LS  ++ L I ++DLLK+DVEGDE  VLQGI+ +DW  I+Q+ +EVHDV+ R++ I  LL            E+Q    +  +  ++P+ L++F ++A ++
Sbjct:    7 PNNLEIYYLGKEETEYIYQEIFIQQQYLQHGITINDGDCIFDIGANIGLFSIFLSKLYKSLKILAFEPIHPIFEVLQANINLHSLENIS--------LQNYGLGSENISETAFTFYPNMSSNSTTRPWEKLEQREFMNL--------------------------------------------------------ALNQDIVEYLFTS-------------------------------------------QEVTGEIKTLSSVINSLAIESIDLLKIDVEGDEYEVLQGINQDDWTKIKQIVLEVHDVEDRISQIKTLL------------ESQNFQIIVEHNNLIPSTLKIFNLYAFKK 248          
BLAST of mRNA_H-paniculata_contig1601.3491.1 vs. uniprot
Match: A0A0N1NKX6_9ACTN (Methyltransferase FkbM family n=3 Tax=Actinomycetia TaxID=1760 RepID=A0A0N1NKX6_9ACTN)

HSP 1 Score: 117 bits (294), Expect = 4.870e-26
Identity = 96/332 (28.92%), Postives = 136/332 (40.96%), Query Frame = 2
Query:  260 ETEFLYEEVFVRRSYLQHGLVVQDGAVVVDAGANVGLFSLQCLQEAKGVQVYAFEPIPALYEVLVKNLHSVKPVIAGVCPKPVVLRVALGAEQDQQLFTYFDTDPGESTRHPKEREEQRRTLQADAGAKSWREAMVTAGEVEDETSITKARDRGAVARTPKTDTDLGECDQQRVLGEGESLLQRPVQDSMLIERPVGKRGSEPGDGEEVGHEAEDKKRCGVHNTENHSEGEGSRGGQSVLCNVVPLSLALHQLGIAA-VDLLKVDVEGDELAVLQGISSNDWPNIRQVTVEVHDVDGRLATIVDLLRSATVGFNEVCWEAQTTSEVDGYVMV 1252
            E +F+Y E+FV R+YL+HG+ + D + +VDAGANVGLFSL   QE  G ++ AFEPIPA+++ L++NL S      G     VV     G  +DQ  FT++   PG STR+P+                                                                     Q+ V   + +E+              +G EA D     V                 V   V  LS  L        +DLLK+DVEG EL V++G+ + DW  +RQ  +EV D+DGRL  ++ +L +   G      +A    EV  Y MV
Sbjct:   27 EVDFIYNEIFVERAYLKHGIQLSDSSRIVDAGANVGLFSLFVKQEFPGARILAFEPIPAIHQALLENLDS-----RGAKDVEVVRSALGGRHEDQVRFTFYPALPGNSTRYPE---------------------------------------------------------------------QKKVGQELTVEQ--------------IGQEAVDAIMAAV----------------EVEAEVNRLSDVLRDWAPEGPIDLLKIDVEGAELEVMEGLDAADWQRVRQAVIEVQDLDGRLDAVLAVLDAQ--GLKATVEDAANLPEVFRYSMV 252          
BLAST of mRNA_H-paniculata_contig1601.3491.1 vs. uniprot
Match: UPI00196289BA (FkbM family methyltransferase n=1 Tax=Streptomyces actuosus TaxID=1885 RepID=UPI00196289BA)

HSP 1 Score: 117 bits (294), Expect = 4.870e-26
Identity = 102/335 (30.45%), Postives = 142/335 (42.39%), Query Frame = 2
Query:  260 ETEFLYEEVFVRRSYLQHGLVVQDGAVVVDAGANVGLFSLQCLQEAKGVQVYAFEPIPALYEVLVKNL--HSVKPVIAGVCPKPVVLRVALGAEQDQQL-FTYFDTDPGESTRHPKEREEQRRTLQADAGAKSWREAMVTAGEVEDETSITKARDRGAVARTPKTDTDLGECDQQRVLGEGESLLQRPVQDSMLIERPVGKRGSEPGDGEEVGHEAEDKKRCGVHNTENHSEGEGSRGGQSVLCNVVPLSLALHQLGIAA-VDLLKVDVEGDELAVLQGISSNDWPNIRQVTVEVHDVDGRLATIVDLLRSATVGFNEVCWEAQTTSEVDGYVMV 1252
            E +F+Y E+FV R+YL+HG+ +   A VVDAGANVGLFSL   QE    ++ AFEPIPA++  L++NL  H  K V         V+R ALG + ++++ FT++   PG STR+P                                                          +Q+ +G+  ++ Q                         +G EA D+   GV                 V   V  LS AL        VDLLK+DVEG EL V++G+ + DW  +RQ  VEV D+DGRL  +  +L +   GF      A    EV  Y MV
Sbjct:   27 EVDFIYNEIFVERAYLRHGIQLSGSARVVDAGANVGLFSLFVKQEFPDARILAFEPIPAIHRALLENLDGHGAKDV--------EVVRAALGRQAEERVRFTFYPAIPGNSTRYP----------------------------------------------------------EQKKVGQELTVAQ-------------------------IGQEAVDRFMAGV----------------EVEAEVRRLSDALRAWAPEGPVDLLKIDVEGAELEVMEGLDTADWQRVRQAVVEVQDLDGRLDAVRGILDAQ--GFTVTVESAANLPEVFRYSMV 252          
BLAST of mRNA_H-paniculata_contig1601.3491.1 vs. uniprot
Match: A0A8J6XA30_DESMC (Amino acid adenylation domain-containing protein n=2 Tax=Desmonostoc muscorum TaxID=1179 RepID=A0A8J6XA30_DESMC)

HSP 1 Score: 125 bits (314), Expect = 5.480e-26
Identity = 93/318 (29.25%), Postives = 137/318 (43.08%), Query Frame = 2
Query:  224 PNGMVFEYLDEQETEFLYEEVFVRRSYLQHGLVVQDGAVVVDAGANVGLFSLQCLQEAKGVQVYAFEPIPALYEVLVKNLHSVKPVIAGVCPKPVVLRVALGAEQDQQLFTYFDTDPGESTRHPKEREEQRRTLQADAGAKSWREAMVTAGEVEDETSITKARDRGAVARTPKTDTDLGECDQQRVLGEGESLLQRPVQDSMLIERPVGKRGSEPGDGEEVGHEAEDKKRCGVHNTENHSEGEGSRGGQSVLCNVVPLSLALHQLGIAAVDLLKVDVEGDELAVLQGISSNDWPNIRQVTVEVHDVDGRLATIVDLLR 1177
            PNGMV  +L+  ET+F+Y+E+F  ++YL+HG+ +   + + D GAN+G+FSL   Q  K   +YAFEPIP ++EVL  N       + G+  K  +    L +E+    FTY+                            S R A  T     DE  + K+                     Q+ +G G++ L     D +L ER   +R +                                       C++  +S  + + GIA +DLLK+D E  E+ VL GI   DW  IRQ+ VEVHD+DGRL  I  LL+
Sbjct: 1594 PNGMVIVHLNHSETDFVYQEIFEEKTYLKHGITLNSKSCIFDVGANIGMFSLFMAQTCKDAVIYAFEPIPPVFEVLSLNAS-----LYGLNIK--LFDCGLSSEEMDDEFTYYPN----------------------VSVISGRFANAT-----DEQEVVKSF-----------------LLNQQSIGNGQTALSSAEIDELLAERLTSQRFN---------------------------------------CHLKTISSVIRENGIAQIDLLKIDAEKSEMFVLAGIEEEDWSKIRQIIVEVHDIDGRLEQITTLLK 1821          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1601.3491.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRM3_ECTSI2.090e-5664.94FkbM n=1 Tax=Ectocarpus siliculosus TaxID=2880 Rep... [more]
A0A7S4RML8_9DINO8.290e-3732.28Hypothetical protein (Fragment) n=2 Tax=Alexandriu... [more]
UPI0004C4DD813.420e-2830.81FkbM family methyltransferase n=1 Tax=Streptomyces... [more]
UPI0016855CB64.350e-2726.39FkbM family methyltransferase n=2 Tax=Nostoc TaxID... [more]
A0A101SVT2_9ACTN1.030e-2630.18Methyltransf_21 domain-containing protein n=1 Tax=... [more]
UPI00180A2E1F1.400e-2630.19Amino acid adenylation domain-containing protein n... [more]
UPI001684431A2.060e-2625.21FkbM family methyltransferase n=2 Tax=Cyanobacteri... [more]
A0A0N1NKX6_9ACTN4.870e-2628.92Methyltransferase FkbM family n=3 Tax=Actinomyceti... [more]
UPI00196289BA4.870e-2630.45FkbM family methyltransferase n=1 Tax=Streptomyces... [more]
A0A8J6XA30_DESMC5.480e-2629.25Amino acid adenylation domain-containing protein n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1601contigH-paniculata_contig1601:15105..18914 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score201.1
Seed ortholog evalue1.1e-48
Seed eggNOG ortholog2880.D8LRM3
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Methyltransferase
EggNOG OGs2CZ5Z@1,2S8ND@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1886
Cds size1308
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929282.0017292-UTR-H-paniculata_contig1601:15104..152971622929282.0017292-UTR-H-paniculata_contig1601:15104..15297Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1601 15105..15297 +
1691480799.892961-UTR-H-paniculata_contig1601:15104..152971691480799.892961-UTR-H-paniculata_contig1601:15104..15297Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1601 15105..15297 +
1622929282.156562-UTR-H-paniculata_contig1601:18529..189141622929282.156562-UTR-H-paniculata_contig1601:18529..18914Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1601 18530..18914 +
1691480799.9508138-UTR-H-paniculata_contig1601:18529..189141691480799.9508138-UTR-H-paniculata_contig1601:18529..18914Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1601 18530..18914 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929282.0132627-CDS-H-paniculata_contig1601:15297..153841622929282.0132627-CDS-H-paniculata_contig1601:15297..15384Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1601 15298..15384 +
1691480799.9025059-CDS-H-paniculata_contig1601:15297..153841691480799.9025059-CDS-H-paniculata_contig1601:15297..15384Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1601 15298..15384 +
1622929282.0247283-CDS-H-paniculata_contig1601:16377..165061622929282.0247283-CDS-H-paniculata_contig1601:16377..16506Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1601 16378..16506 +
1691480799.9099755-CDS-H-paniculata_contig1601:16377..165061691480799.9099755-CDS-H-paniculata_contig1601:16377..16506Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1601 16378..16506 +
1622929282.1033046-CDS-H-paniculata_contig1601:16666..168451622929282.1033046-CDS-H-paniculata_contig1601:16666..16845Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1601 16667..16845 +
1691480799.9198859-CDS-H-paniculata_contig1601:16666..168451691480799.9198859-CDS-H-paniculata_contig1601:16666..16845Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1601 16667..16845 +
1622929282.1233113-CDS-H-paniculata_contig1601:17320..178491622929282.1233113-CDS-H-paniculata_contig1601:17320..17849Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1601 17321..17849 +
1691480799.9305463-CDS-H-paniculata_contig1601:17320..178491691480799.9305463-CDS-H-paniculata_contig1601:17320..17849Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1601 17321..17849 +
1622929282.1424232-CDS-H-paniculata_contig1601:18145..185291622929282.1424232-CDS-H-paniculata_contig1601:18145..18529Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1601 18146..18529 +
1691480799.9416752-CDS-H-paniculata_contig1601:18145..185291691480799.9416752-CDS-H-paniculata_contig1601:18145..18529Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1601 18146..18529 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1601.3491.1prot_H-paniculata_contig1601.3491.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1601 15298..18529 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1601.3491.1

>prot_H-paniculata_contig1601.3491.1 ID=prot_H-paniculata_contig1601.3491.1|Name=mRNA_H-paniculata_contig1601.3491.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=436bp
MGDRPKLMEDPNGMVFEYLDEQETEFLYEEVFVRRSYLQHGLVVQDGAVV
VDAGANVGLFSLQCLQEAKGVQVYAFEPIPALYEVLVKNLHSVKPVIAGV
CPKPVVLRVALGAEQDQQLFTYFDTDPGESTRHPKEREEQRRTLQADAGA
KSWREAMVTAGEVEDETSITKARDRGAVARTPKTDTDLGECDQQRVLGEG
ESLLQRPVQDSMLIERPVGKRGSEPGDGEEVGHEAEDKKRCGVHNTENHS
EGEGSRGGQSVLCNVVPLSLALHQLGIAAVDLLKVDVEGDELAVLQGISS
NDWPNIRQVTVEVHDVDGRLATIVDLLRSATVGFNEVCWEAQTTSEVDGY
VMVVPTALRMFLVFAKRRPSSGELSEVTGTASTAAIRDDRYHTAKRADSE
VKGVSVVEAGKQTREDRGRDIRNNLSTFCYCNTAR*
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mRNA from alignment at H-paniculata_contig1601:15105..18914+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1601.3491.1 ID=mRNA_H-paniculata_contig1601.3491.1|Name=mRNA_H-paniculata_contig1601.3491.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3810bp|location=Sequence derived from alignment at H-paniculata_contig1601:15105..18914+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATAAGCCTCCGAATTCTCCATAGCTTTGAGTTCTTGGATTTTGTCTCCCC AGGGGTGGCCCTCAAGGTGAAAAGTTTAAATTGTGATAACTTCGATTGCC ACCCCATCGAAGCTTGTAAGACAGGCGTCAACTTCATGTACATCTTTGGA AAACCGCTTGCCACACCAAGTGGCGGTTACAAAAACGATAACAATGGGCG ATCGCCCTAAGCTCATGGAGGACCCTAATGGCATGGTCTTCGAGTACTTG GACGAACAGGAAACAGAGTTCCTATATGAGGTGATGATATCGTATACGCT TGAAATGGCAGTCACGAGATACTGCAAAGTCTTCAGCAAAAAATACTGAA TACTGCCACACTCCTTGCTCTGTCTGAACGATCCACAGTACATTAAGCCT CTCGCTACTACTGTTTCCTGGCACTTCCTGACAACCAACAGTACTTCAAA GTTGTTCACTGCAATAACTGTATCGATTTGCATCAGTGAGGGTGATTGCA TAGGTAGATAGATCTATGACAACGACAGTGTCCCTCGATATTAAGTTCTA CATTTACATTTTGAGCTCTCGAGCTCTCGGGCTCAAGTTTTGCAACACTT CGAATTCTCGATCTAATAGCGTGCAGCGTTGCACCTGCAGCTAAATAGAT GGTGAGCCACTGAATGTTTGACTATTTTGTGTACATCTTTACGTGCGTGC GGGATCGTCGCACCTGTCCACAGGGTCTTGACAACGTGCAGCCGACTGCG GCGCTGTGGCAGCAGCCACACCCTAGCTATTCCTGAAGAAATGTACGCTC CGTTGTGTGTTTCACGCACACCCGCATAGTGCTCGCATATGAAGTCGAGA TTTAAGTGAGAGACGTAGCGGGAGATCTAGCGATATTTTAGCGAAAGATC TAGCGAAATGTGTGCCGACAGATGTAAACGTAGATCTAGCGAGAGACATG TACCAACACATGTGTCAATATATTCACCGACTCATTTCCCGACACATTTA CCAACATATATAGCGACTCAGTGTGTAGGTATTTTACTCTCTAAACGCCT TGTTTACTGCGCGTTGACACCTACATAGTTGGCATGCTTCTCGATCCTGA ATTGCATACTTCCACTCAATACTTCCACTCAGTCGCTCCTGTATTTTCCG TACGCAGCCCTGTGGCTGGCTGCGGTCTTGTACAATTTACGCTGCATACA AAGAGGGTACATTTTACCGCATATACATCATCCCTACTGGCCGTCCTCGG ACATGTGTACACCCCTACTGCAGGAGGTGTTCGTCCGGCGCTCTTACCTG CAGCACGGCCTGGTCGTCCAAGATGGTGCGGTTGTAGTCGACGCGGGTGC CAATGTGGGGCTATTTTCGTTGCAATGCCTGCAAGAGGCCAAGGGTGTTC AGGTGGGCAAGTGCAATGGGCCTGTCTGTCTGTCAAGTCGCCACGCCGCC TGCATGTACTGGCGCGCAAGGCGAGGCACGGTACGTTTCGCAACGCCCTC AAGAGTGGATTATCGTGACAAACAAAATTTACTGCATACCTGCAACGTCA ATTTGCATCCAGGTGTATGCTTTCGAGCCAATCCCCGCCCTTTACGAAGT CTTGGTGAAAAACCTACACTCCGTCAAACCTGTCATTGCTGGTGTTTGTC CAAAACCGGTCGTGCTTCGAGTGGCCCTTGGAGCCGAGCAAGACCAGCAG TTGTTCACGTACTTCGACACCGACCCTGGAGAGAGTACCAGGTACGGTCA CATCGTAGATCGATGCATCACACTTTGGTGACGGGGTCACACACCAGGCT ACTTTTAGGAATGTGTCGTACCGTTTTGACTTGAACGTGATTCCAGGCAT AAAAGCAGAAAATTCGAATTCGTCTTCAGCGCTTCAGGGCGTTTACGTAT TTTTAAGAACACTATACCTTGAAAGGTTACGTCTGACTTGTGCAGCAGGG CAGTGTTGTGTGGTCGGCTATGCAAATATTTGGCACATTATGTTTGCCGG TGTTCAATTTCACCTGTAATTGCATCATGTTGAAACGTCGCTTTTCTTGC TTTCAGCCTCGGTATTCGAAACCGCAGAAATTCACCCTCTCGTGGGCGAT AGAAATGGCCGCGGATCTGTTTTGCAACTCACGATGGGCGAGTTCCTGAC TGCTCGGCACAAGCCACAGCTACTACTGTGTTCAAAGTTACCCGCCCCTC TAACCTCGTGCTGAAGACATCCGAAGGAGAGGGAGGAGCAGCGGCGCACA TTACAGGCAGATGCAGGAGCGAAGTCTTGGAGAGAAGCTATGGTAACAGC GGGTGAGGTGGAGGACGAGACATCAATCACAAAGGCGAGAGATCGTGGCG CGGTTGCTCGAACGCCGAAGACTGACACTGATCTTGGCGAATGTGATCAA CAAAGAGTACTTGGGGAAGGTGAAAGCCTGCTGCAGCGACCCGTACAGGA TTCTATGCTAATAGAACGTCCGGTCGGAAAGCGTGGGAGTGAACCAGGGG ACGGCGAAGAAGTCGGGCATGAAGCAGAAGATAAGAAGAGGTGTGGAGTG CATAACACCGAGAACCATTCCGAAGGCGAGGGTTCGAGAGGGGGACAGTC GGTTCTATGCAACGTGGTTCCTTTGTCCCTCGCTCTCCATCAACTTGGTA TCGCTGCAGTAGACTTGCTCAAGGTGGACGTGGAAGGCGACGAGCTGGCT GTACTTCAGGGTATTTCCTCCAATGATTGGCCAAATATTCGACAGGTGAA GCTCTGGGGCGGAGTGAACAGTTTGCTCCCATGACCGGCGCAAACTTTCG TTTATAGCGTTGGTCCTTTATACTGGGCGCAAAACGATATCCATTTATGT GCTTCATTTGCGACGCCAAACGTAGGACGTGCGTGCCGAGGTAGTGGTAG TCGTTGTGTTTATTGCGTCTGCTGGCCAAAGCAGTCAAGTACCTGCAGCA TCGTATACAACGCATGAAGGCCCGGCCGACCCCCGTCACAATGCTCAACG TTCCAATCGCCCTATTGCTGGGATTCTACCGTGCGTGTCAGGTGACGGTC GAAGTGCACGACGTGGACGGCAGATTGGCAACAATAGTCGATTTATTGCG ATCAGCAACGGTCGGCTTCAATGAGGTATGTTGGGAAGCACAGACGACCA GCGAGGTCGACGGGTATGTGATGGTTGTACCAACTGCTCTCCGAATGTTC CTGGTCTTTGCCAAACGGCGACCTTCTTCTGGTGAACTGTCGGAAGTGAC TGGAACAGCATCGACAGCAGCCATTCGCGACGACCGCTATCACACTGCCA AGAGAGCTGATAGCGAAGTAAAAGGGGTGTCGGTTGTGGAAGCTGGAAAG CAAACGAGGGAAGATAGGGGGCGCGATATCAGGAACAACTTGAGCACCTT TTGTTACTGTAATACTGCAAGGTAGCTCCCGGGTGTGGCTGTCTCGTATA ACAATACGGAGATGGTGAGTAGGGACTGGACAAGGCTCCACAAGAGTAAG AGTACGTATTGTTTTGAGGCTACCTCGTACTCGACGTTTGTGCTTGTGTT CGTCACATGCGCTTACATTCTTTGCTAAATGAAAGTCAAGAACCTTTGTT ATTTGATGTCGGAGAATGTCGCGGGTAGACATCGTTTCATCGTAAAGACA CACATGATGTCGCTCCGGAAAAGCATCTGAGGAGTCAACACCAAGAGGTG TATTTATGTGTTTTTAGTGAGGTAGTGATTCGCCTGCGACTTACGCTGCT TACGCTCGAACGTGGGTCCTTGCTATTAATTAATCTCTCCACGCATGTTT ATATACCCTG
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Coding sequence (CDS) from alignment at H-paniculata_contig1601:15105..18914+

>mRNA_H-paniculata_contig1601.3491.1 ID=mRNA_H-paniculata_contig1601.3491.1|Name=mRNA_H-paniculata_contig1601.3491.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2616bp|location=Sequence derived from alignment at H-paniculata_contig1601:15105..18914+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGCGATCGCCCTAAGCTCATGGAGGACCCTAATGGCATGGTCTTCGA
GTACTTGGACGAACAGGAAACAGAGTTCCTATATGAGATGGGCGATCGCC
CTAAGCTCATGGAGGACCCTAATGGCATGGTCTTCGAGTACTTGGACGAA
CAGGAAACAGAGTTCCTATATGAGGAGGTGTTCGTCCGGCGCTCTTACCT
GCAGCACGGCCTGGTCGTCCAAGATGGTGCGGTTGTAGTCGACGCGGGTG
CCAATGTGGGGCTATTTTCGTTGCAATGCCTGCAAGAGGCCAAGGGTGTT
CAGGAGGTGTTCGTCCGGCGCTCTTACCTGCAGCACGGCCTGGTCGTCCA
AGATGGTGCGGTTGTAGTCGACGCGGGTGCCAATGTGGGGCTATTTTCGT
TGCAATGCCTGCAAGAGGCCAAGGGTGTTCAGGTGTATGCTTTCGAGCCA
ATCCCCGCCCTTTACGAAGTCTTGGTGAAAAACCTACACTCCGTCAAACC
TGTCATTGCTGGTGTTTGTCCAAAACCGGTCGTGCTTCGAGTGGCCCTTG
GAGCCGAGCAAGACCAGCAGTTGTTCACGTACTTCGACACCGACCCTGGA
GAGAGTACCAGGTGTATGCTTTCGAGCCAATCCCCGCCCTTTACGAAGTC
TTGGTGAAAAACCTACACTCCGTCAAACCTGTCATTGCTGGTGTTTGTCC
AAAACCGGTCGTGCTTCGAGTGGCCCTTGGAGCCGAGCAAGACCAGCAGT
TGTTCACGTACTTCGACACCGACCCTGGAGAGAGTACCAGACATCCGAAG
GAGAGGGAGGAGCAGCGGCGCACATTACAGGCAGATGCAGGAGCGAAGTC
TTGGAGAGAAGCTATGGTAACAGCGGGTGAGGTGGAGGACGAGACATCAA
TCACAAAGGCGAGAGATCGTGGCGCGGTTGCTCGAACGCCGAAGACTGAC
ACTGATCTTGGCGAATGTGATCAACAAAGAGTACTTGGGGAAGGTGAAAG
CCTGCTGCAGCGACCCGTACAGGATTCTATGCTAATAGAACGTCCGGTCG
GAAAGCGTGGGAGTGAACCAGGGGACGGCGAAGAAGTCGGGCATGAAGCA
GAAGATAAGAAGAGGTGTGGAGTGCATAACACCGAGAACCATTCCGAAGG
CGAGGGTTCGAGAGGGGGACAGTCGGTTCTATGCAACGTGGTTCCTTTGT
CCCTCGCTCTCCATCAACTTGGTATCGCTGCAGTAGACTTGCTCAAGGTG
GACGTGGAAGGCGACGAGCTGGCTGTACTTCAGGGTATTTCCTCCAATGA
TTGGCCAAATATTCGACAGACATCCGAAGGAGAGGGAGGAGCAGCGGCGC
ACATTACAGGCAGATGCAGGAGCGAAGTCTTGGAGAGAAGCTATGGTAAC
AGCGGGTGAGGTGGAGGACGAGACATCAATCACAAAGGCGAGAGATCGTG
GCGCGGTTGCTCGAACGCCGAAGACTGACACTGATCTTGGCGAATGTGAT
CAACAAAGAGTACTTGGGGAAGGTGAAAGCCTGCTGCAGCGACCCGTACA
GGATTCTATGCTAATAGAACGTCCGGTCGGAAAGCGTGGGAGTGAACCAG
GGGACGGCGAAGAAGTCGGGCATGAAGCAGAAGATAAGAAGAGGTGTGGA
GTGCATAACACCGAGAACCATTCCGAAGGCGAGGGTTCGAGAGGGGGACA
GTCGGTTCTATGCAACGTGGTTCCTTTGTCCCTCGCTCTCCATCAACTTG
GTATCGCTGCAGTAGACTTGCTCAAGGTGGACGTGGAAGGCGACGAGCTG
GCTGTACTTCAGGGTATTTCCTCCAATGATTGGCCAAATATTCGACAGGT
GACGGTCGAAGTGCACGACGTGGACGGCAGATTGGCAACAATAGTCGATT
TATTGCGATCAGCAACGGTCGGCTTCAATGAGGTATGTTGGGAAGCACAG
ACGACCAGCGAGGTCGACGGGTATGTGATGGTTGTACCAACTGCTCTCCG
AATGTTCCTGGTCTTTGCCAAACGGCGACCTTCTTCTGGTGAACTGTCGG
AAGTGACTGGAACAGCATCGACAGCAGCCATTCGCGACGACCGCTATCAC
ACTGCCAAGAGAGCTGATAGCGAAGTAAAAGGGGTGTCGGTTGTGGAAGC
TGGAAAGCAAACGAGGGAAGATAGGGGGCGCGATATCAGGAACAACTTGA
GCACCTTTTGTTACTGTAATACTGCAAGGTAGGTGACGGTCGAAGTGCAC
GACGTGGACGGCAGATTGGCAACAATAGTCGATTTATTGCGATCAGCAAC
GGTCGGCTTCAATGAGGTATGTTGGGAAGCACAGACGACCAGCGAGGTCG
ACGGGTATGTGATGGTTGTACCAACTGCTCTCCGAATGTTCCTGGTCTTT
GCCAAACGGCGACCTTCTTCTGGTGAACTGTCGGAAGTGACTGGAACAGC
ATCGACAGCAGCCATTCGCGACGACCGCTATCACACTGCCAAGAGAGCTG
ATAGCGAAGTAAAAGGGGTGTCGGTTGTGGAAGCTGGAAAGCAAACGAGG
GAAGATAGGGGGCGCGATATCAGGAACAACTTGAGCACCTTTTGTTACTG
TAATACTGCAAGGTAG
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