mRNA_H-paniculata_contig16008.3489.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16008.3489.1 vs. uniprot
Match: A0A6H5KIW5_9PHAE (Aqp protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIW5_9PHAE) HSP 1 Score: 300 bits (769), Expect = 2.390e-99 Identity = 156/260 (60.00%), Postives = 189/260 (72.69%), Query Frame = 1
Query: 1 ERKMELGIMWESEASGSGRSGPGYIHADLIRAACAEFIGMLLFLFFVITIARFLPGDEVVALATSATT---MISFGFGLSIFVLVYILADVSGANLNPAVSAGLLVARRISVERFFIYIIAQTLGAIAGAFIATTFMDSTEGGYNSVASNVTEIDAFGGEVLCTFLLVTTVFAATDGVLGKKHGHINALLPFAIGMTVLLAHLVLIPVDGCSINPARSLATSVTNNNWENHWVFWIGPLVGGVLAAIVWEVILRPAQPVK 771
+R+ ELG+ E++ + ++ L R+ C EF+G +LFLF VIT+ARF + T AT MIS FGLSIFVLVYI DVSGA+LNPAVS GLLV +RISVERF +Y+IAQ GA AGA IA+T++ +T GG+N++A NV+ DAFG EVLCTFLLV TVFAA DG LG+K H LLP IGM VLLAHLVLIP+DG SINPARS AT+VTNN W +HWVFW+GPL+GGVLA + WE ILRP Q V+
Sbjct: 8 QREWELGLTSEAQIRQENGTTEPFVGYRLFRSLCGEFLGCMLFLFMVITVARFSDDRIQEGITTEATANIIMISSAFGLSIFVLVYIFVDVSGAHLNPAVSIGLLVGKRISVERFLLYVIAQMAGATAGAGIASTYLSTTRGGFNALADNVSATDAFGAEVLCTFLLVVTVFAACDGELGRKTAHTGPLLPLVIGMAVLLAHLVLIPIDGASINPARSFATAVTNNEWGDHWVFWVGPLLGGVLATVTWEAILRPDQVVE 267
BLAST of mRNA_H-paniculata_contig16008.3489.1 vs. uniprot
Match: A0A6H5JZJ3_9PHAE (Aqp protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZJ3_9PHAE) HSP 1 Score: 286 bits (733), Expect = 1.060e-90 Identity = 147/259 (56.76%), Postives = 185/259 (71.43%), Query Frame = 1
Query: 4 RKMELGIMWESEASGSGRS-GPGYIHADLIRAACAEFIGMLLFLFFVITIARFLPGDE---VVALATSATTMISFGFGLSIFVLVYILADVSGANLNPAVSAGLLVARRISVERFFIYIIAQTLGAIAGAFIATTFMDSTEGGYNSVASNVTEIDAFGGEVLCTFLLVTTVFAATDGVLGKKHGHINALLPFAIGMTVLLAHLVLIPVDGCSINPARSLATSVTNNNWENHWVFWIGPLVGGVLAAIVWEVILRPAQPV 768
R+ ELG++ E++ ++ P ++ L R+ C EF+G LLFLF IT+AR E A ++A MIS FGLSIFVLVYI ADVSGA+LNPAVS LLV +RIS+ERF +Y++AQ G + GA +A +F +T GG+N++A V+ I+AFG EVLCTFLLV TVF A DG LG+K+ H LLP IGM VL+AHLVLIP+DGCSINPARS AT+V NN W++HWVFW+GPL+GGVL WE ILRP Q V
Sbjct: 243 REWELGLITEAQRCKESKTVEPPFLGYRLFRSVCGEFLGCLLFLFMAITVARLAGNREDGDAAAEQSAAIFMISSAFGLSIFVLVYIFADVSGAHLNPAVSMSLLVGKRISIERFGLYVVAQMAGGVIGASMANSFPSTTGGGFNAIADGVSAIEAFGAEVLCTFLLVVTVFTACDGELGRKNAHTGPLLPLVIGMAVLIAHLVLIPIDGCSINPARSFATAVINNKWDDHWVFWVGPLLGGVLGTATWEAILRPDQTV 501
BLAST of mRNA_H-paniculata_contig16008.3489.1 vs. uniprot
Match: D8LTV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTV4_ECTSI) HSP 1 Score: 247 bits (630), Expect = 2.970e-78 Identity = 137/259 (52.90%), Postives = 165/259 (63.71%), Query Frame = 1
Query: 4 RKMELGIMWESEASGSGRS-GPGYIHADLIRAACAEFIGMLLFLFFVITIARFLPGDE---VVALATSATTMISFGFGLSIFVLVYILADVSGANLNPAVSAGLLVARRISVERFFIYIIAQTLGAIAGAFIATTFMDSTEGGYNSVASNVTEIDAFGGEVLCTFLLVTTVFAATDGVLGKKHGHINALLPFAIGMTVLLAHLVLIPVDGCSINPARSLATSVTNNNWENHWVFWIGPLVGGVLAAIVWEVILRPAQPV 768
R+ ELG++ E++ ++ P ++ L R+ C EF+G LLFLF IT+AR E T+ MIS FGLSIFVLVYI ADVSGA+LNPAVS LLV +RIS+ERF +Y+ AQ AG +AFG EVLCTFLLV TVF A DG LG+K+ H LLP IGM VL+AHLVLIP+DGCSINPARS AT+V NN W++HWVFW+GPL+GGVL WE ILRP QPV
Sbjct: 33 REWELGLITETQRCKESKTVEPPFLGYRLFRSVCGEFLGCLLFLFMAITVARLAGNREDGDAAGEQTATILMISSAFGLSIFVLVYIFADVSGAHLNPAVSMSLLVGKRISIERFGLYVAAQ-----AG-------------------------EAFGAEVLCTFLLVVTVFTACDGELGRKNAHTGPLLPLVIGMAVLIAHLVLIPIDGCSINPARSFATAVINNKWDDHWVFWVGPLLGGVLGTATWEAILRPDQPV 261
BLAST of mRNA_H-paniculata_contig16008.3489.1 vs. uniprot
Match: A0A835YY46_9STRA (Aquaporin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY46_9STRA) HSP 1 Score: 219 bits (559), Expect = 2.510e-67 Identity = 118/244 (48.36%), Postives = 157/244 (64.34%), Query Frame = 1
Query: 82 DLIRAACAEFIGMLLFLFFVITIARFLPGDEVVALATSAT-----TMISFGFGLSIFVLVYILADVSGANLNPAVSAGLLVARRISVERFFIYIIAQTLGAIAGAFIATTFMDS----TEGGYNSVASNVTEIDAFGGEVLCTFLLVTTVFAATDGVLGKKHGHINALLPFAIGMTVLLAHLVLIPVDGCSINPARSLATSVTNNNWENHWVFWIGPLVGGVLAAIVWEVILRPAQPVKAIVAN 786
DL R E I LFL+ IT F+ D + + AT +I+F FGL+IFVLVY+ ADVSGAN+NPAVS GL + +RI+++R +YIIAQ LGAI G +A + + T GG N V + V A GGE+LCT+LLVT V AT+ L K + H LLP+ IGMTV+L H L+PVDGCSINPARS +++ N W++HWVFW+GPL+G +A +++E ILRP +P + A
Sbjct: 26 DLFRGIVGELIATTLFLYVCITTVVFMRIDNISEVNNGATGSTERLLIAFNFGLAIFVLVYLFADVSGANINPAVSWGLCLGKRITLKRCGLYIIAQCLGAIIGVGLACSMSKAHFWETNGGANVVNNQVGAHQALGGEILCTWLLVTVVLCATNPGLQKAYVHQAVLLPWVIGMTVMLCHFTLVPVDGCSINPARSFGSAIITNTWKDHWVFWLGPLIGATIATLLFEAILRPPEPAPKLEAE 269
BLAST of mRNA_H-paniculata_contig16008.3489.1 vs. uniprot
Match: I0ZAA7_COCSC (Plasma membrane intrinsic protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0ZAA7_COCSC) HSP 1 Score: 178 bits (451), Expect = 6.930e-51 Identity = 95/194 (48.97%), Postives = 121/194 (62.37%), Query Frame = 1
Query: 184 LATSATTMISFGFGLSIFVLVYILADVSGANLNPAVSAGLLVARRISVERFFIYIIAQTLGAIAGAFIATTFMD----STEGGYNSVASNVTEIDAFGGEVLCTFLLVTTVFAATDGVLGKKHGHINALLPFAIGMTVLLAHLVLIPVDGCSINPARSLATSVTNNNWENHWVFWIGPLVGGVLAAIVWEVILR 753
L TS I+ FG SIFVLVY A SG ++NPAV+ G+ VAR+ISV R +Y++AQ LGA GA + D + GG N+++ E +G E + T LV TVFAATD H+ L PFAIGM V L HLV IP+DGCSINPARS + + +W+N WVFW+GPL G VLAA ++E+I R
Sbjct: 73 LGTSNVLNIAIAFGFSIFVLVYCAASFSGGHINPAVTFGMFVARKISVLRAVLYMVAQCLGACTGAGLVRAIDDDGWRAAGGGANALSPGFGEAAGWGLETILTMALVFTVFAATDSERATDTAHLPVLAPFAIGMVVFLCHLVAIPLDGCSINPARSFGAAAVSGSWDNQWVFWVGPLSGAVLAAAIYELIFR 266
BLAST of mRNA_H-paniculata_contig16008.3489.1 vs. uniprot
Match: A0A5J4ZF72_9ASTE (Uncharacterized protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J4ZF72_9ASTE) HSP 1 Score: 176 bits (447), Expect = 1.350e-50 Identity = 103/236 (43.64%), Postives = 140/236 (59.32%), Query Frame = 1
Query: 91 RAACAEFIGMLLFLFF-VITIARFLPGDEVVALATSATTMISFGFGLSIFVLVYILADVSGANLNPAVSAGLLVARRISVERFFIYIIAQTLGAIAGAFIATTFMDSTE----GGYNSVASNVTEIDAFGGEVLCTFLLVTTVFAATDGVLGKKHGHINALLPFAIGMTVLLAHLVLIPVDGCSINPARSLATSVTNNN---WENHWVFWIGPLVGGVLAAIVWEVILRPAQPVKA 774
RA AEF+ LLFL+ V+T+ + +T T I++ FG IF LVY A +SG ++NPAV+ GLL+AR++S+ R Y++ Q LGAI GA I F S GG NSV+ T+ D G E++ TFLLV TVF+ATD + H+ L P IG V L HL IPV G INPARSL ++ N W++HW+FW+GP VG LAA+ ++++R A P K+
Sbjct: 54 RAGIAEFVASLLFLYITVLTVMGVVRSPS--KCSTVGTQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGIVKGFQKSQYERLGGGANSVSHGYTKGDGLGAEIMGTFLLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPVTGTGINPARSLGAAIIYNREHAWDDHWIFWVGPFVGAALAAVYHQIVIR-AIPFKS 286
BLAST of mRNA_H-paniculata_contig16008.3489.1 vs. uniprot
Match: A0A833R6M1_9POAL (Putative water stress induced tonoplast intrinsic protein n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833R6M1_9POAL) HSP 1 Score: 176 bits (445), Expect = 2.620e-50 Identity = 105/240 (43.75%), Postives = 142/240 (59.17%), Query Frame = 1
Query: 82 DLIRAACAEFIGMLLFLFFVI-TIARFLPGDEVVALATSATTMISFGFGLSIFVLVYILADVSGANLNPAVSAGLLVARRISVERFFIYIIAQTLGAIAGAFIATTFM----DSTEGGYNSVASNVTEIDAFGGEVLCTFLLVTTVFAATDGVLGKKHGHINALLPFAIGMTVLLAHLVLIPVDGCSINPARSLATSVTNNN---WENHWVFWIGPLVGGVLAAIVWEVILRPAQPVKAI 777
L RA AEFI LLFL+ I T+ + + A +++ FG SIFVLVY + +SG ++NPAV+ G LV R+IS+ R +YIIAQ LGAI GA I M +S GG NSVA + A G E++ TF LV TVF+ATD + + LLP IG V + HL IP+ G INPARSL ++ NN W HW+FW+GPLVG ++AA+ +++L+ + VKA+
Sbjct: 37 SLYRAVIAEFIATLLFLYITIATVIGYKNQSKAEACTGVGFEGVAWSFGGSIFVLVYCIGGISGGHINPAVTFGFLVGRKISLVRAVLYIIAQCLGAICGAGIVKGIMKHPFNSLGGGANSVAHGYSRGAALGAEIMGTFFLVYTVFSATDPKRTARDSFVPVLLPLPIGFAVFVVHLATIPITGTGINPARSLGAALIYNNKKIWREHWIFWVGPLVGALIAALYHKLVLK-GEAVKAL 275
BLAST of mRNA_H-paniculata_contig16008.3489.1 vs. uniprot
Match: A0A8J9WPI2_9CHLO (Aquaporin PIP2-5 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WPI2_9CHLO) HSP 1 Score: 176 bits (446), Expect = 3.770e-50 Identity = 109/253 (43.08%), Postives = 141/253 (55.73%), Query Frame = 1
Query: 85 LIRAACAEFIGMLLFLFFVI-TIARFLPGDEVVALA-----------------TSATTMISFGFGLSIFVLVYILADVSGANLNPAVSAGLLVARRISVERFFIYIIAQTLGAIAGA----FIATTFMDSTEGGYNSVASNVTEIDAFGGEVLCTFLLVTTVFAATDGVLGKKHGHINALLPFAIGMTVLLAHLVLIPVDGCSINPARSLATSVTNNNWENHWVFWIGPLVGGVLAAIVWEVILRPAQPVKAI 777
L +A AE+ LFLFF I T++ + +LA T I+ FG SIFVLVY A SG ++NPAV+ G+LVAR+ISV R +YI+AQ LGA GA I T + GG N++++ V +G E + T LV TVFAATD H+ L PFAIGM V L HLV IP+DGCSINPARS + W++ WVFW+GPL G V+AA +E+ R +P KA+
Sbjct: 21 LFKAVVAEYAVTTLFLFFTIGTVSSNCHTADNASLAGADKSLESAGYGTCFLGTGNVLNIAMAFGFSIFVLVYCAASFSGGHINPAVTFGMLVARKISVSRAVLYIVAQCLGACTGAGLVKAIDTHGWRAAGGGTNALSAGVNNAAGWGLETILTMALVFTVFAATDAERASDTAHLPVLAPFAIGMVVFLCHLVAIPLDGCSINPARSFGAAAVAGKWDDQWVFWVGPLCGAVMAATAYELFFR-TKPNKAV 272
BLAST of mRNA_H-paniculata_contig16008.3489.1 vs. uniprot
Match: A0A2K8BJH5_HEVBR (Plasma membrane intrinsic protein n=4 Tax=rosids TaxID=71275 RepID=A0A2K8BJH5_HEVBR) HSP 1 Score: 175 bits (444), Expect = 3.800e-50 Identity = 103/237 (43.46%), Postives = 138/237 (58.23%), Query Frame = 1
Query: 91 RAACAEFIGMLLFLFF-VITIARFLPGDEVVALATSATTMISFGFGLSIFVLVYILADVSGANLNPAVSAGLLVARRISVERFFIYIIAQTLGAIAGAFIATTF-----MDSTEGGYNSVASNVTEIDAFGGEVLCTFLLVTTVFAATDGVLGKKHGHINALLPFAIGMTVLLAHLVLIPVDGCSINPARSLATSVTNNN---WENHWVFWIGPLVGGVLAAIVWEVILRPAQPVKA 774
RA AEFI LFL+ V+T+ F AT T I++ FG IF LVY A +SG ++NPAV+ GL +AR++S+ R YII Q LGAI GA + F ++ GG N VA T+ D G E++ TF+LV TVF+ATD + H+ L P IG V L HL IP+ G INPARSL ++ N W++HWVFW+GP +G LAA+ ++++R A P KA
Sbjct: 52 RAGIAEFIATFLFLYITVLTVMGFSKSTN--KCATVGTQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAICGAGVVKGFEGDRVYETLGGGANVVAHGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWVFWVGPFIGAALAAVYHQIVIR-AIPFKA 285
BLAST of mRNA_H-paniculata_contig16008.3489.1 vs. uniprot
Match: A0A804K5E8_MUSAM ((wild Malaysian banana) hypothetical protein n=2 Tax=Musa TaxID=4640 RepID=A0A804K5E8_MUSAM) HSP 1 Score: 174 bits (442), Expect = 7.570e-50 Identity = 96/229 (41.92%), Postives = 136/229 (59.39%), Query Frame = 1
Query: 91 RAACAEFIGMLLFLFF-VITIARFLPGDEVVALATSATTMISFGFGLSIFVLVYILADVSGANLNPAVSAGLLVARRISVERFFIYIIAQTLGAIAGAFIATTFM----DSTEGGYNSVASNVTEIDAFGGEVLCTFLLVTTVFAATDGVLGKKHGHINALLPFAIGMTVLLAHLVLIPVDGCSINPARSLATSVTNNN---WENHWVFWIGPLVGGVLAAIVWEVILR 753
RA AEF+ LF++ ++T+ + D +T I++ FG IF LVY A +SG ++NPAV+ GLL+AR++S+ R Y++ Q LGAI GA + F +S GG N VA+ T+ D G E++ TF+LV TVF+ATD + H+ L P IG V L HL IP+ G INPARSL ++ N W +HW+FW+GPL+G LAAI +V++R
Sbjct: 53 RAGIAEFMATFLFIYVSILTVMGVVKSDS--KCSTVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAIFYVVMQCLGAICGAGVVKGFQKGVYESNGGGANVVAAGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPVLAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKEHAWNDHWIFWVGPLIGAALAAIYHQVVIR 279 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16008.3489.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16008.3489.1 >prot_H-paniculata_contig16008.3489.1 ID=prot_H-paniculata_contig16008.3489.1|Name=mRNA_H-paniculata_contig16008.3489.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=264bp MELGIMWESEASGSGRSGPGYIHADLIRAACAEFIGMLLFLFFVITIARFback to top mRNA from alignment at H-paniculata_contig16008:283..4414- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16008.3489.1 ID=mRNA_H-paniculata_contig16008.3489.1|Name=mRNA_H-paniculata_contig16008.3489.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4132bp|location=Sequence derived from alignment at H-paniculata_contig16008:283..4414- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16008:283..4414- >mRNA_H-paniculata_contig16008.3489.1 ID=mRNA_H-paniculata_contig16008.3489.1|Name=mRNA_H-paniculata_contig16008.3489.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1584bp|location=Sequence derived from alignment at H-paniculata_contig16008:283..4414- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |