mRNA_H-paniculata_contig1596.3455.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1596.3455.1
Unique NamemRNA_H-paniculata_contig1596.3455.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig1596.3455.1 vs. uniprot
Match: A0A8K1FL14_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FL14_PYTOL)

HSP 1 Score: 276 bits (706), Expect = 2.040e-87
Identity = 138/260 (53.08%), Postives = 183/260 (70.38%), Query Frame = 1
Query:    1 YPYMSSGEPATCVYVSTSRDHPLHLWDAFTGSLRATYRAYDHLDEVVAANSVCFNTGGNKIFAGYNRMIRVFDVAEPGRSFEARPTCKTRKSPVGQRGIISSLAFSPTAFGGGLFAAGSYARTICLYSANSRGRAVAEFSTPTMGGVTHLQFAPGGLLLFSGSRKDFEIICWDVRHTKQALHSFRRAADTNQRIEFDIDPSGAYLATGSTAREALVYDIQSLALIKTIDNQADAVSSVCFHPYAAL--LAVGTGQRHFNL 774
            YPYM+S +PATC+++STSRDHP+H+WDA+TG LRATYRA+DHLDE+ AA SV FN  G+KIFAGY+RMIR FD+ +P R F +RP CKTRKS  GQRGIIS+L F+P      ++AAGSY  T C+Y+ ++ G  +         G+T +QF+P G  LF+G+R+D  I CWD+R + Q + SF R A+TNQR+EFD+  +G YLATGS    AL+YD+ +  L+       DAV+ V F P A    +AV TGQRH++L
Sbjct:  133 YPYMTSQDPATCIFISTSRDHPIHMWDAYTGQLRATYRAFDHLDEITAAFSVAFNATGDKIFAGYDRMIRFFDITQPSRDFVSRPLCKTRKSRDGQRGIISTLHFNPDH--SKIYAAGSYNGTTCIYTEDT-GEELLCLRDHDGHGITQVQFSPDGRYLFTGARRDGSIHCWDIRQSVQVVQSFTRQAETNQRVEFDLHCTGRYLATGSRDGRALLYDVSTGELVDENIRMPDAVNGVSFFPDATRGRVAVTTGQRHYDL 389          
BLAST of mRNA_H-paniculata_contig1596.3455.1 vs. uniprot
Match: A0A7S2GDB9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GDB9_9STRA)

HSP 1 Score: 273 bits (699), Expect = 6.410e-87
Identity = 147/290 (50.69%), Postives = 188/290 (64.83%), Query Frame = 1
Query:    1 YPYMSSGEPATCVYVSTSRDHPLHLWDAFTGSLRATYRAYDHLDEVVAANSVCFNTGGNKIFAGYNRMIRVFDVAEPGRSFEARPTCKTRKSPVGQRGIISSLAFSPTAFGGGLFAAGSYARTICLYSANSRGRAVAEFST-------PTMGGVTHLQFAPGGLLLFSGSRKDF-----EIICWDVRHTKQALHSFRRAADTNQRIEFDIDPSGAYLATGSTAREALVYDIQSLALIKTIDNQADAVSSVCFHPYAALLAVGTGQRHFNLDTINAESDSDEMLQDSASEG 834
            YP+M S +P TCV+ STSRDHP+HLWDAFTG++RATYRAYDHLDE VAA S+ F+  G ++ AGYNR +RVFD+A PGR    RPT  +RK+  GQRGIIS+LA +P +    L+AAGSY+ +I LY   S G+   E  T         +GGVT LQF+  G  LFSGSR+        +ICWDVR T + L S+ R A T QRI+FD+DP+G YL TG    +A VYD+ S A++K    Q D V+ V FHP   LLA+ TG RH         +D+ +++QDSA  G
Sbjct:   61 YPHMRSDQPVTCVFASTSRDHPIHLWDAFTGTIRATYRAYDHLDENVAAYSMAFSEDGTQLLAGYNRCVRVFDLAHPGRPISDRPTSASRKAKTGQRGIISALAVAPES---SLYAAGSYSESIVLYDLRS-GKCRLEMETCCHDTGASIIGGVTQLQFSRDGRFLFSGSRRGHTPDASHVICWDVRQTGEMLASYPRDASTYQRIQFDLDPTGRYLVTGDEGGKAKVYDLTSGAVVKEYPRQGDVVNGVSFHPTLPLLAISTGTRH---------ADTADVVQDSAETG 337          
BLAST of mRNA_H-paniculata_contig1596.3455.1 vs. uniprot
Match: K3WVC6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVC6_GLOUD)

HSP 1 Score: 266 bits (680), Expect = 7.330e-84
Identity = 132/260 (50.77%), Postives = 182/260 (70.00%), Query Frame = 1
Query:    1 YPYMSSGEPATCVYVSTSRDHPLHLWDAFTGSLRATYRAYDHLDEVVAANSVCFNTGGNKIFAGYNRMIRVFDVAEPGRSFEARPTCKTRKSPVGQRGIISSLAFSPTAFGGGLFAAGSYARTICLYSANSRGRAVAEFSTPTMGGVTHLQFAPGGLLLFSGSRKDFEIICWDVRHTKQALHSFRRAADTNQRIEFDIDPSGAYLATGSTAREALVYDIQSLALIKTIDNQADAVSSVCFHP--YAALLAVGTGQRHFNL 774
            YP+M+S  P +C++VSTSRD P+H+WDA+TG LRATYRAYDHLDE+ AANS+ FNT G+KIF G++RMIR FD+++P R F+ARP  KTR+S  GQRGIIS++ F+P      ++AAGSY  T C+Y+   RG  +         G+T +QF+P G  LF+ +R+D  I CWD+R++ Q L++F R ADTNQRIEFD+  +G YLA+GS   + L+YD+ +  L+       DA + V F P   AA +AV +GQRH++L
Sbjct:   95 YPFMNSQVPESCIFVSTSRDQPVHMWDAYTGDLRATYRAYDHLDEIAAANSIAFNTTGDKIFCGFDRMIRFFDISQPSRDFKARPLSKTRRSREGQRGIISTIHFNPDH--SKIYAAGSYGGTTCIYT-EDRGEELLCLRDHDGKGITQVQFSPDGRFLFTAARRDSRIHCWDIRNSNQILYTFHRIADTNQRIEFDLHCAGRYLASGSQDGKVLLYDLLTGELVDDGVRLPDAANGVSFFPDPSAARVAVTSGQRHYDL 351          
BLAST of mRNA_H-paniculata_contig1596.3455.1 vs. uniprot
Match: A0A662X8T5_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X8T5_9STRA)

HSP 1 Score: 265 bits (677), Expect = 7.830e-83
Identity = 130/260 (50.00%), Postives = 180/260 (69.23%), Query Frame = 1
Query:    1 YPYMSSGEPATCVYVSTSRDHPLHLWDAFTGSLRATYRAYDHLDEVVAANSVCFNTGGNKIFAGYNRMIRVFDVAEPGRSFEARPTCKTRKSPVGQRGIISSLAFSPTAFGGGLFAAGSYARTICLYSANSRGRAVAEFSTPTMGGVTHLQFAPGGLLLFSGSRKDFEIICWDVRHTKQALHSFRRAADTNQRIEFDIDPSGAYLATGSTAREALVYDIQSLALIKTIDNQADAVSSVCFHP--YAALLAVGTGQRHFNL 774
            YP+MSS  P++C++VSTSRDHP+HLWDA+TG+LRA+YR++DHLDE+ +A SV FN  G+K+FAG++RMIR FD+++P R F ARP  KTR+S  GQRG+ISSL F+P      ++AAGSYA T C+Y+    G  +         G++ ++F+P G  L++ +R+D  I CWD+R T Q LH+F R AD+NQR+EFD+   G YLATGS +   L+YD Q+ AL+       D  + V F P    A LAV +GQRH++L
Sbjct:  134 YPFMSSANPSSCIFVSTSRDHPVHLWDAYTGALRASYRSFDHLDELASAQSVAFNATGDKLFAGFDRMIRFFDLSQPSRDFHARPLSKTRRSRKGQRGLISSLHFNPDF--SKIYAAGSYAGTTCVYT-EDEGEELLALRDHDGRGISQVRFSPCGRFLYTAARRDPSIHCWDIRATNQILHTFHRVADSNQRVEFDVHCGGKYLATGSRSGRVLLYDTQTGALLDERIQLPDCANGVSFFPDPSRATLAVSSGQRHYDL 390          
BLAST of mRNA_H-paniculata_contig1596.3455.1 vs. uniprot
Match: A0A0P1A8N8_PLAHL (Guanine nucleotide-binding protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A8N8_PLAHL)

HSP 1 Score: 261 bits (666), Expect = 1.090e-81
Identity = 127/260 (48.85%), Postives = 182/260 (70.00%), Query Frame = 1
Query:    1 YPYMSSGEPATCVYVSTSRDHPLHLWDAFTGSLRATYRAYDHLDEVVAANSVCFNTGGNKIFAGYNRMIRVFDVAEPGRSFEARPTCKTRKSPVGQRGIISSLAFSPTAFGGGLFAAGSYARTICLYSANSRGRAVAEFSTPTMGGVTHLQFAPGGLLLFSGSRKDFEIICWDVRHTKQALHSFRRAADTNQRIEFDIDPSGAYLATGSTAREALVYDIQSLALIKTIDNQADAVSSVCFHP--YAALLAVGTGQRHFNL 774
            YP+MSS +P +C++VSTSRD P+HLWDA+TG LRA+YRA+DH+DE+ +A+S+ FNT G K+FAG++RMIR FD+++P R F+ARP  KTR+S  GQRG+IS+L F+P      ++AAGSYA T C+Y+   +G  +         G+T ++F+P G  LF+ +R+D +I CWD+R + + LH+F R ADTN RIEFD+   G YLATGS +   ++YD+ + AL+       D  + V F P    A+LAV +GQRH++L
Sbjct:   98 YPFMSSADPNSCIFVSTSRDQPVHLWDAYTGELRASYRAFDHMDELTSAHSLAFNTTGTKLFAGFDRMIRYFDLSQPSRDFQARPLSKTRRSRDGQRGLISTLDFNPDH--SQIYAAGSYAGTTCVYT-EDKGEELLTLRDHGGRGITQVKFSPCGRFLFTAARQDAQIHCWDIRASNEILHTFNRVADTNLRIEFDLHCGGKYLATGSRSGCVMLYDVMTGALLNENIRLPDCANGVSFFPDPTRAMLAVSSGQRHYDL 354          
BLAST of mRNA_H-paniculata_contig1596.3455.1 vs. uniprot
Match: A0A484ECG6_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484ECG6_BRELC)

HSP 1 Score: 260 bits (665), Expect = 1.450e-81
Identity = 128/260 (49.23%), Postives = 178/260 (68.46%), Query Frame = 1
Query:    1 YPYMSSGEPATCVYVSTSRDHPLHLWDAFTGSLRATYRAYDHLDEVVAANSVCFNTGGNKIFAGYNRMIRVFDVAEPGRSFEARPTCKTRKSPVGQRGIISSLAFSPTAFGGGLFAAGSYARTICLYSANSRGRAVAEFSTPTMGGVTHLQFAPGGLLLFSGSRKDFEIICWDVRHTKQALHSFRRAADTNQRIEFDIDPSGAYLATGSTAREALVYDIQSLALIKTIDNQADAVSSVCF--HPYAALLAVGTGQRHFNL 774
            YP+MSS +P +C++VSTSRD P+HLWDA+TG LRA+YRA+DH+DE+ +A S+ FNT G K+FAG++RMIRVFD+++P R F+ARP  KTR+S  GQRG+IS+L F+P      ++AAGSYA T C+Y+    G  V         G++ +QF+P G  LF+ +R+D  I CWD+R T + LH+F R ADTN R+EFD+   G YLA GS   + L+YD+ +  L+       D  + V F  +P  A+LAV +GQRH+ L
Sbjct:   98 YPFMSSVDPISCIFVSTSRDQPVHLWDAYTGELRASYRAFDHMDELTSAQSLAFNTTGTKLFAGFDRMIRVFDLSQPSRDFKARPLSKTRRSRDGQRGLISTLHFNPDH--SKIYAAGSYAGTTCVYT-EDEGEEVLALRDHDGRGISQVQFSPCGRFLFTAARRDARIHCWDIRATNEILHTFHRVADTNLRVEFDLHCGGKYLAAGSQTGQVLLYDVLTGHLLDNSIQLPDCANGVSFFPNPSKAMLAVSSGQRHYAL 354          
BLAST of mRNA_H-paniculata_contig1596.3455.1 vs. uniprot
Match: A0A6A3FPX2_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3FPX2_9STRA)

HSP 1 Score: 261 bits (666), Expect = 1.830e-81
Identity = 125/260 (48.08%), Postives = 177/260 (68.08%), Query Frame = 1
Query:    1 YPYMSSGEPATCVYVSTSRDHPLHLWDAFTGSLRATYRAYDHLDEVVAANSVCFNTGGNKIFAGYNRMIRVFDVAEPGRSFEARPTCKTRKSPVGQRGIISSLAFSPTAFGGGLFAAGSYARTICLYSANSRGRAVAEFSTPTMGGVTHLQFAPGGLLLFSGSRKDFEIICWDVRHTKQALHSFRRAADTNQRIEFDIDPSGAYLATGSTAREALVYDIQSLALIKTIDNQADAVSSVCFHP--YAALLAVGTGQRHFNL 774
            YP+MSS +P +C++VSTSRD P+HLWDA+TG LRA+YRA+DH+DE+ +A S+ FN+ G K+FAG++RMIR FD+++P R F ARP  KTR+S  GQRG+IS+L F+P      ++AAGSY  T C+Y+    G  +         G++ ++F+P G  LF+ +R+D  I CWD+R T + LH+F R ADTNQR+EFD+   G YLATGS     ++YD+ +  L+       D  + V F P  Y A++AV +GQRH+NL
Sbjct:  104 YPFMSSADPNSCIFVSTSRDQPVHLWDAYTGELRASYRAFDHMDELASAQSLAFNSTGTKLFAGFDRMIRYFDLSQPSRDFRARPLTKTRRSRKGQRGLISTLHFNPDH--SKIYAAGSYGGTTCVYT-EDEGEELLALRDHDGRGISQVKFSPCGRFLFTAARRDARIHCWDIRATNEILHTFNRVADTNQRVEFDLHCGGRYLATGSQTCRVMLYDVLTGELLDQSIRLPDCANGVSFFPDPYRAIVAVSSGQRHYNL 360          
BLAST of mRNA_H-paniculata_contig1596.3455.1 vs. uniprot
Match: M4C337_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C337_HYAAE)

HSP 1 Score: 260 bits (664), Expect = 3.650e-81
Identity = 132/295 (44.75%), Postives = 193/295 (65.42%), Query Frame = 1
Query:    1 YPYMSSGEPATCVYVSTSRDHPLHLWDAFTGSLRATYRAYDHLDEVVAANSVCFNTGGNKIFAGYNRMIRVFDVAEPGRSFEARPTCKTRKSPVGQRGIISSLAFSPTAFGGGLFAAGSYARTICLYSANSRGRAVAEFSTPTMGGVTHLQFAPGGLLLFSGSRKDFEIICWDVRHTKQALHSFRRAADTNQRIEFDIDPSGAYLATGSTAREALVYDIQSLALIKTIDNQADAVSSVCFHPYA--ALLAVGTGQRHFNLDTINAESDSDEMLQDSASEGSNCCSKEVQNGVAIY 879
            YP+MSS +P +C++VSTS+D P+HLWDA+TG LRATYRA+DHLDE+ +A+S+ FN  G K+FAG++RMIR FD+++P R F ARP  KTR+S  GQRG+IS+L F+P      ++AAGSY  T C+Y+    G  +         G++ ++F+P G  L++ +R+D  I CWD+R TK+  H+F R ADTNQR+EFD+   G YLA GS     ++YD+ +  L+       D V+ V F P A  A +AV +GQRHF+L   + ES+ D+++  +        S +V+N + +Y
Sbjct:  100 YPFMSSADPTSCIFVSTSQDQPVHLWDAYTGELRATYRAFDHLDELTSAHSLAFNATGTKLFAGFDRMIRFFDLSQPSRDFRARPLSKTRRSRNGQRGLISTLHFNPDH--SKIYAAGSYGGTTCVYT-EDEGEELLTLCDHDGRGISQVRFSPCGRFLYTTARRDARIHCWDIRATKEICHTFNRVADTNQRLEFDLHCGGRYLAAGSRTGRVMLYDVLTGELLDESIRLPDCVNGVSFFPNASRATIAVCSGQRHFDLPE-DMESEEDDVVSQAEVAKEAVASSKVRNLLQVY 390          
BLAST of mRNA_H-paniculata_contig1596.3455.1 vs. uniprot
Match: H3HD53_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HD53_PHYRM)

HSP 1 Score: 256 bits (654), Expect = 4.890e-80
Identity = 123/260 (47.31%), Postives = 177/260 (68.08%), Query Frame = 1
Query:    1 YPYMSSGEPATCVYVSTSRDHPLHLWDAFTGSLRATYRAYDHLDEVVAANSVCFNTGGNKIFAGYNRMIRVFDVAEPGRSFEARPTCKTRKSPVGQRGIISSLAFSPTAFGGGLFAAGSYARTICLYSANSRGRAVAEFSTPTMGGVTHLQFAPGGLLLFSGSRKDFEIICWDVRHTKQALHSFRRAADTNQRIEFDIDPSGAYLATGSTAREALVYDIQSLALIKTIDNQADAVSSVCFHP--YAALLAVGTGQRHFNL 774
            YP+M+S +P +C++VSTSRD P+HLWDA+TG LRA+YRAYDHLDE+ +A S+ FN+ G K+FAG++RMIR FD+++P R F ARP  KTR++  GQRG+IS+L F+P      ++AAGSY  T C+Y+    G  +         G++ ++F+P G  LF+ +R+D  I CWD+R T + LHSF R AD+NQR+EFD+   G YLATG+     ++YD+ + AL+       D  + V F P    A++AV +GQRH++L
Sbjct:   98 YPFMTSADPNSCIFVSTSRDQPVHLWDAYTGELRASYRAYDHLDELASAQSLAFNSTGTKLFAGFDRMIRFFDLSQPSRDFRARPLTKTRRARKGQRGLISTLHFNPDH--SKIYAAGSYGGTTCVYT-EDEGEELLALRDHDGRGISQVKFSPCGRFLFTAARRDARIHCWDIRATNEILHSFNRVADSNQRVEFDLHCGGRYLATGNRTGRVMLYDVLTGALLDESIQLPDCANGVSFFPDPTRAMVAVSSGQRHYDL 354          
BLAST of mRNA_H-paniculata_contig1596.3455.1 vs. uniprot
Match: A0A2D4C9P1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C9P1_PYTIN)

HSP 1 Score: 257 bits (656), Expect = 5.820e-80
Identity = 134/271 (49.45%), Postives = 178/271 (65.68%), Query Frame = 1
Query:    1 YPYMSSGEPATCVYVSTSRDHPLHLWDAFTGSLRATYRAYDHLDEVVAANSVCFNTGGNKIFAGYNRMIRVFDVAEPGRSFEARPTCKTRKSPVGQRGIISSLAFSPTAFGGGLFAAGSYARTICLYSANSRGRAVAEFSTPTMGGVTHLQFAPGGLLLFSGSRKDFEIICWDVRHTKQALHSFRRAADTNQRIEFDIDPSGAYLATGSTAREALVYDIQSLALIKTIDNQADAVSSVCFHP--YAALLAVGTGQRHFNLDTINAESDSDE 807
            YP+M S +P +C++VSTSRD P+H+WDA+TG+LRATYRA+DHLDE+ AA SV FN  G+K+FAGY+R IRVFD+  P R FE R  CKTR+S  GQRGIIS+L F+P      ++AAGSY  T  +YS ++ G  +         GVT +QF+P G  L++ +R+D  I CWDVRH+ Q + SF R ADTNQRIEFD+  +G YL TGS    AL+YD+ +           DAV+ V F P    A +A+ TGQRH+ +  ++     DE
Sbjct:  125 YPFMRSSDPTSCIFVSTSRDQPIHMWDAYTGALRATYRAFDHLDEITAAFSVAFNATGDKLFAGYDRTIRVFDITRPSRDFETRALCKTRRSRDGQRGIISTLHFNPDH--SRVYAAGSYNGTTYVYSEDT-GEEILCLRDHDGRGVTQVQFSPCGNYLYTAARRDATINCWDVRHSLQVVQSFSRLADTNQRIEFDVHCTGRYLMTGSRDGRALLYDVPTGERXDDRLAMPDAVNGVSFFPDPSRARVAISTGQRHYEIPGVDDSDGXDE 392          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1596.3455.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8K1FL14_PYTOL2.040e-8753.08Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2GDB9_9STRA6.410e-8750.69Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
K3WVC6_GLOUD7.330e-8450.77Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A662X8T5_9STRA7.830e-8350.00Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A0P1A8N8_PLAHL1.090e-8148.85Guanine nucleotide-binding protein n=1 Tax=Plasmop... [more]
A0A484ECG6_BRELC1.450e-8149.23Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A6A3FPX2_9STRA1.830e-8148.08Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
M4C337_HYAAE3.650e-8144.75Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
H3HD53_PHYRM4.890e-8047.31Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A2D4C9P1_PYTIN5.820e-8049.45Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1596contigH-paniculata_contig1596:633..2468 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score258.8
Seed ortholog evalue2.9e-66
Seed eggNOG ortholog65071.PYU1_T008924
Preferred nameWRAP53
KEGG koko:K15361,ko:K16745
KEGG Pathwayko03460,map03460
Hectar predicted targeting categoryother localisation
GOsGO:0000723,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005697,GO:0005737,GO:0005829,GO:0005834,GO:0005886,GO:0006139,GO:0006259,GO:0006278,GO:0006403,GO:0006725,GO:0006807,GO:0006996,GO:0006997,GO:0007004,GO:0008104,GO:0008150,GO:0008152,GO:0008277,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009898,GO:0009966,GO:0009968,GO:0009987,GO:0010556,GO:0010557,GO:0010604,GO:0010646,GO:0010648,GO:0010833,GO:0010969,GO:0015030,GO:0016020,GO:0016043,GO:0016604,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019897,GO:0019898,GO:0022607,GO:0023051,GO:0023057,GO:0030515,GO:0030575,GO:0030576,GO:0031137,GO:0031234,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032200,GO:0032202,GO:0032203,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033365,GO:0034504,GO:0034512,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0042592,GO:0042802,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043900,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044459,GO:0044464,GO:0044877,GO:0045744,GO:0045935,GO:0046483,GO:0046999,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050790,GO:0050794,GO:0051052,GO:0051054,GO:0051087,GO:0051171,GO:0051173,GO:0051179,GO:0051276,GO:0051338,GO:0051347,GO:0051641,GO:0051972,GO:0051973,GO:0060238,GO:0060240,GO:0060249,GO:0060255,GO:0060341,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070034,GO:0070201,GO:0070202,GO:0070203,GO:0070727,GO:0071704,GO:0071840,GO:0071897,GO:0071944,GO:0080090,GO:0090029,GO:0090304,GO:0090666,GO:0090670,GO:0090671,GO:0090672,GO:0090685,GO:0097159,GO:0098552,GO:0098562,GO:0098796,GO:0098797,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1903405,GO:1903827,GO:1903829,GO:1904814,GO:1904816,GO:1904851,GO:1904867,GO:1904951,GO:1905360,GO:1990173,GO:1990904,GO:2000112,GO:2000241,GO:2000242,GO:2000278,GO:2000573
EggNOG free text desc.Wd-repeat protein. Source PGD
EggNOG OGs1MBP1@121069,KOG2919@1,KOG2919@2759
COG Functional cat.S
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko03400
Exons4
Model size879
Cds size870
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1596.3455.1prot_H-paniculata_contig1596.3455.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1596 642..2468 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929274.8160448-UTR-H-paniculata_contig1596:632..6411622929274.8160448-UTR-H-paniculata_contig1596:632..641Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1596 633..641 +
1691480796.526805-UTR-H-paniculata_contig1596:632..6411691480796.526805-UTR-H-paniculata_contig1596:632..641Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1596 633..641 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929274.826241-CDS-H-paniculata_contig1596:641..8221622929274.826241-CDS-H-paniculata_contig1596:641..822Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1596 642..822 +
1691480796.5368216-CDS-H-paniculata_contig1596:641..8221691480796.5368216-CDS-H-paniculata_contig1596:641..822Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1596 642..822 +
1622929274.8418822-CDS-H-paniculata_contig1596:1152..13541622929274.8418822-CDS-H-paniculata_contig1596:1152..1354Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1596 1153..1354 +
1691480796.5446627-CDS-H-paniculata_contig1596:1152..13541691480796.5446627-CDS-H-paniculata_contig1596:1152..1354Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1596 1153..1354 +
1622929274.8582494-CDS-H-paniculata_contig1596:1507..16521622929274.8582494-CDS-H-paniculata_contig1596:1507..1652Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1596 1508..1652 +
1691480796.5520937-CDS-H-paniculata_contig1596:1507..16521691480796.5520937-CDS-H-paniculata_contig1596:1507..1652Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1596 1508..1652 +
1622929274.872779-CDS-H-paniculata_contig1596:2126..24681622929274.872779-CDS-H-paniculata_contig1596:2126..2468Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1596 2127..2468 +
1691480796.5600429-CDS-H-paniculata_contig1596:2126..24681691480796.5600429-CDS-H-paniculata_contig1596:2126..2468Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1596 2127..2468 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1596.3455.1

>prot_H-paniculata_contig1596.3455.1 ID=prot_H-paniculata_contig1596.3455.1|Name=mRNA_H-paniculata_contig1596.3455.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=290bp
MSSGEPATCVYVSTSRDHPLHLWDAFTGSLRATYRAYDHLDEVVAANSVC
FNTGGNKIFAGYNRMIRVFDVAEPGRSFEARPTCKTRKSPVGQRGIISSL
AFSPTAFGGGLFAAGSYARTICLYSANSRGRAVAEFSTPTMGGVTHLQFA
PGGLLLFSGSRKDFEIICWDVRHTKQALHSFRRAADTNQRIEFDIDPSGA
YLATGSTAREALVYDIQSLALIKTIDNQADAVSSVCFHPYAALLAVGTGQ
RHFNLDTINAESDSDEMLQDSASEGSNCCSKEVQNGVAIY
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mRNA from alignment at H-paniculata_contig1596:633..2468+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1596.3455.1 ID=mRNA_H-paniculata_contig1596.3455.1|Name=mRNA_H-paniculata_contig1596.3455.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1836bp|location=Sequence derived from alignment at H-paniculata_contig1596:633..2468+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TACCCTTACATGTCGTCTGGCGAGCCTGCGACCTGCGTATATGTGAGCAC AAGTCGAGATCATCCACTACATCTGTGGGATGCATTTACAGGAAGTCTGC GGGCCACGTACAGGGCGTATGACCACCTGGATGAAGTGGTTGCTGCAAAT TCTGTATGTTTCAATACCGGCGGCAACAAAATATTTGCAGGTGACAACAT GCCATCACTCAAATGCCCTCATATTCGCTCGCTTTACTTGATCGTCCCGA CGACGACACACCGAGTATATCATAGCACACGCCCGTTTTGGCGCAGGGTC TCTCAGAGACAATTGGCTTGGCTTTCGACACCATACCATCGTGGCCGTCG CCTGTTTCCCCGATCATTGAGGGCTAATCGCAGCGTTGAACCTTACACTA TGTTTGTACAGGATACTACTGATCCTCTGTACATCGGAATCTCTCGCTAA CTAGAGTGTAACATACCTGCCGTGCCTCTGATTTCACGTGATGCGTCGAA CGGTGTGTGTCATGGAACAGGTTATAACAGAATGATCAGGGTGTTTGACG TGGCTGAGCCAGGGCGGTCATTTGAAGCACGACCCACGTGCAAAACTCGC AAAAGTCCGGTTGGTCAACGAGGTATAATATCTTCCCTCGCCTTTTCTCC GACGGCTTTTGGGGGTGGACTTTTCGCTGCTGGCTCGTACGCGAGGACCA TTTGTTTGTACAGCGCCAACAGGTATGACATTGATCAGAATCTTTAGATA AGTGTGCGTTTAACGTTGTACACTTCATAGGTCGCTGCTCAACTCCAGTA AATAGATATGATGAAACATTTTCACAAAATGATCTGTCGCGTGTTGTGCG CACTTGCCTCTCCATTGTGTGACAGTCGCGGTCGTGCTGTTGCGGAATTT TCCACCCCAACGATGGGTGGAGTGACGCATTTACAATTTGCACCAGGGGG GCTTCTGCTGTTTTCTGGATCACGAAAAGATTTTGAAATCATTTGCTGGG ATGTTCGGCACACGAAACAAGTGAGAATATTCTTGGGACCAATACTGATC GGTTTGTAAGATGAAAGGTTACAAAACGTACAAAATTGAAGTTATGATGC CAACTGAAATGTTGAGTAGAAAATTTACACTCTCTGATTAATTCGGGTGA TATTCCAAACATGTCCTGTATTTTTTCTAAACCGACTTAATCTTGATATG CATACGTCGTATTTGTGCGTTGGGTTGCGTAACTTGGACTGAAGATTTCG CGTTACCTTTCCAGCGACTATAGCATGACTGACTTGCATTCCACGATCAC TATATATCGTATACGCGGTGTATTATTTGTCCGCTTTTCCTCTGGTTGCG TTTGTGCGACACAGGTGATGGCTGCATGTTGAGTTATAAGCAATGGGTTA CTGTCCATTATCTCACGCCAATTCGACGTATACTCCGGAATATATATCAT ACGTTTATTACCCTCCATTTTTGTTACATGCGTTCGCTTCACAGGCCCTT CACTCATTTCGACGAGCGGCAGACACTAATCAGCGTATTGAATTTGACAT TGACCCGAGTGGGGCGTATCTGGCAACAGGCTCCACAGCACGGGAGGCTT TGGTGTACGACATTCAAAGCCTCGCGCTTATTAAGACTATTGACAACCAA GCAGACGCGGTAAGCAGTGTATGCTTCCACCCCTACGCGGCCTTATTGGC GGTTGGGACCGGACAGCGACACTTTAACCTCGACACGATCAACGCCGAAT CGGACAGCGACGAAATGCTTCAAGACAGCGCTTCGGAAGGCAGCAATTGC TGCTCGAAAGAAGTTCAAAATGGGGTAGCTATTTAC
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Coding sequence (CDS) from alignment at H-paniculata_contig1596:633..2468+

>mRNA_H-paniculata_contig1596.3455.1 ID=mRNA_H-paniculata_contig1596.3455.1|Name=mRNA_H-paniculata_contig1596.3455.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1740bp|location=Sequence derived from alignment at H-paniculata_contig1596:633..2468+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGTCTGGCGAGCCTGCGACCTGCGTATATGTGAGCACAAGTCGAGA
TCATCCACTACATCTGTGGGATGCATTTACAGGAAGTCTGCGGGCCACGT
ACAGGGCGTATGACCACCTGGATGAAGTGGTTGCTGCAAATTCTGTATGT
TTCAATACCGGCGGCAACAAAATATTTGCAGATGTCGTCTGGCGAGCCTG
CGACCTGCGTATATGTGAGCACAAGTCGAGATCATCCACTACATCTGTGG
GATGCATTTACAGGAAGTCTGCGGGCCACGTACAGGGCGTATGACCACCT
GGATGAAGTGGTTGCTGCAAATTCTGTATGTTTCAATACCGGCGGCAACA
AAATATTTGCAGGTTATAACAGAATGATCAGGGTGTTTGACGTGGCTGAG
CCAGGGCGGTCATTTGAAGCACGACCCACGTGCAAAACTCGCAAAAGTCC
GGTTGGTCAACGAGGTATAATATCTTCCCTCGCCTTTTCTCCGACGGCTT
TTGGGGGTGGACTTTTCGCTGCTGGCTCGTACGCGAGGACCATTTGTTTG
TACAGCGCCAACAGGTTATAACAGAATGATCAGGGTGTTTGACGTGGCTG
AGCCAGGGCGGTCATTTGAAGCACGACCCACGTGCAAAACTCGCAAAAGT
CCGGTTGGTCAACGAGGTATAATATCTTCCCTCGCCTTTTCTCCGACGGC
TTTTGGGGGTGGACTTTTCGCTGCTGGCTCGTACGCGAGGACCATTTGTT
TGTACAGCGCCAACAGTCGCGGTCGTGCTGTTGCGGAATTTTCCACCCCA
ACGATGGGTGGAGTGACGCATTTACAATTTGCACCAGGGGGGCTTCTGCT
GTTTTCTGGATCACGAAAAGATTTTGAAATCATTTGCTGGGATGTTCGGC
ACACGAAACAATCGCGGTCGTGCTGTTGCGGAATTTTCCACCCCAACGAT
GGGTGGAGTGACGCATTTACAATTTGCACCAGGGGGGCTTCTGCTGTTTT
CTGGATCACGAAAAGATTTTGAAATCATTTGCTGGGATGTTCGGCACACG
AAACAAGCCCTTCACTCATTTCGACGAGCGGCAGACACTAATCAGCGTAT
TGAATTTGACATTGACCCGAGTGGGGCGTATCTGGCAACAGGCTCCACAG
CACGGGAGGCTTTGGTGTACGACATTCAAAGCCTCGCGCTTATTAAGACT
ATTGACAACCAAGCAGACGCGGTAAGCAGTGTATGCTTCCACCCCTACGC
GGCCTTATTGGCGGTTGGGACCGGACAGCGACACTTTAACCTCGACACGA
TCAACGCCGAATCGGACAGCGACGAAATGCTTCAAGACAGCGCTTCGGAA
GGCAGCAATTGCTGCTCGAAAGAAGTTCAAAATGGGGTAGCTATTTACGC
CCTTCACTCATTTCGACGAGCGGCAGACACTAATCAGCGTATTGAATTTG
ACATTGACCCGAGTGGGGCGTATCTGGCAACAGGCTCCACAGCACGGGAG
GCTTTGGTGTACGACATTCAAAGCCTCGCGCTTATTAAGACTATTGACAA
CCAAGCAGACGCGGTAAGCAGTGTATGCTTCCACCCCTACGCGGCCTTAT
TGGCGGTTGGGACCGGACAGCGACACTTTAACCTCGACACGATCAACGCC
GAATCGGACAGCGACGAAATGCTTCAAGACAGCGCTTCGGAAGGCAGCAA
TTGCTGCTCGAAAGAAGTTCAAAATGGGGTAGCTATTTAC
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