|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1162 |
| Cds size | 1071 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15885.3408.1 >prot_H-paniculata_contig15885.3408.1 ID=prot_H-paniculata_contig15885.3408.1|Name=mRNA_H-paniculata_contig15885.3408.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=357bp
MTSPGGRAPSEEGEIPDDSSPGGKKQVDMPTPDADASHDQEEHPLTSLSG
GGGYESRHRHANWVPNSAPESSGVVVSGSGSGVHHDRRDGGISSGRYGDE
GTALASSSSAGKASGGIGNGFGTLAAGGRSAGSAPPRTSSQTPPQQGSGP
MNWYGSGTERGSGGGGAGSGGSSLDRRGSSSRGSGADGGLAQTVGGAAGI
SRDSRSDDGASSNRSGDRPEWSERESRDSRSRTASGSALGRDGRRGSDRN
FRDADGGGGPGGNGGSGRESERPRSPREREPRGRSRDRDVDDPQVERSSG
PEIGGRGSGMSGFPNRFEGRPGGPFRPNDAGGMGGRMGRRGGGIGGRWGL
GNRAGGG back to topmRNA from alignment at H-paniculata_contig15885:3341..5058- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig15885.3408.1 ID=mRNA_H-paniculata_contig15885.3408.1|Name=mRNA_H-paniculata_contig15885.3408.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1718bp|location=Sequence derived from alignment at H-paniculata_contig15885:3341..5058- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCAGGTTTGGTGCTCTCTTGCCCCAGCACGGGGGCCGCCTATATATTAGG
AGATTAACAGGCCCGCTTTCAGCGGAGATCCGCAGAGGTGAATGACGAGC
CCGGGTGGCCGTGCCCCGAGCGAGGAAGGTAAGGATTTATGTTGTTTTTT
CTTCTCAAGTGCTCGTGTGCTCTTACATACGACCGTAAGAACACTGTAAA
TCTGTCACAAGCTGTGTTGAATTTTGTCGCCAAGTGCTCATCGTGGCGTT
GTTAGCTCTGACTGGTGAATGCTGGTTTGTTTTTCATTCTTGTCCGACTC
TGCCCAAATATCGATTTTGGTTCCATTGTGGTATTTCTGGCTTTACTGCG
CGCTTTGGTTTGATGGCATGAAAGTATACGGGTGACTATTCGAGCATCTT
GTTTCGTCTGCGCTTTCATGGCTCAGGAGAACATTGTCGGCTAGACCGTT
GCGATTCCGTTGCTTTTCGTTTCGAGTGTTTGCGCACTCCAGTCAAATTT
GGCGTGAGACTGCCGCCGACATACACTACGATGGATGTTATCAATAAGCA
CGTGTTGCTGTGAACGAATGCACGGGTATCGGTAACCCGCGGTGATATGT
TGCCTCGATTGCTGCGCCCCTCCTCGCGCTGACGATTGGTTTTGCTGCCT
ATGTTGTGTCCGACGTCCGACGTGTGTGTTCCAGGTGAAATCCCCGACGA
CTCTTCGCCCGGCGGTAAAAAACAGGTCGATATGCCGACACCGGACGCTG
ACGCCTCCCACGACCAAGAAGAACATCCTTTGACGAGCTTGAGCGGCGGA
GGAGGATACGAAAGTCGCCACCGACACGCAAATTGGGTGCCGAATAGCGC
CCCCGAATCATCTGGTGTTGTTGTTAGTGGTAGTGGTAGTGGTGTACATC
ACGACCGACGGGACGGGGGTATTTCTTCCGGTAGATATGGCGATGAGGGA
ACGGCGTTGGCCTCCTCCTCTTCCGCTGGGAAAGCGAGCGGGGGAATTGG
GAACGGTTTTGGAACTCTGGCTGCTGGTGGCCGATCAGCGGGATCTGCAC
CCCCTCGCACATCATCGCAGACGCCACCCCAACAAGGTTCGGGTCCGATG
AACTGGTACGGGTCGGGAACAGAGCGGGGAAGTGGCGGTGGTGGTGCTGG
ATCGGGAGGTTCATCTCTGGATCGTCGTGGTAGCAGTAGCCGGGGGAGCG
GAGCCGATGGCGGGTTGGCTCAGACTGTCGGAGGGGCGGCAGGTATTTCA
CGAGATTCTCGGAGTGATGATGGAGCGAGTAGTAACAGAAGTGGCGACCG
TCCTGAATGGAGTGAAAGAGAGAGCCGGGATTCGCGCAGCCGGACGGCGT
CGGGGAGCGCGTTAGGTCGGGACGGGCGCCGTGGATCAGATCGCAACTTT
CGGGATGCAGACGGCGGCGGCGGCCCGGGTGGTAACGGTGGTAGTGGTCG
GGAATCTGAACGCCCGCGGTCTCCGCGCGAACGTGAACCGCGAGGTCGCT
CTAGAGATCGCGACGTTGACGATCCGCAGGTTGAGCGGAGTAGCGGCCCG
GAGATTGGCGGTCGAGGGAGCGGCATGAGCGGGTTCCCGAACCGGTTCGA
GGGTCGACCTGGCGGACCGTTCCGGCCCAATGATGCAGGCGGTATGGGTG
GGCGTATGGGCCGTCGCGGGGGAGGGATCGGCGGTCGCTGGGGCCTCGGC
AATCGAGCCGGCGGCGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig15885:3341..5058- >mRNA_H-paniculata_contig15885.3408.1 ID=mRNA_H-paniculata_contig15885.3408.1|Name=mRNA_H-paniculata_contig15885.3408.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2142bp|location=Sequence derived from alignment at H-paniculata_contig15885:3341..5058- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACGAGCCCGGGTGGCCGTGCCCCGAGCGAGGAAGATGACGAGCCCGG
GTGGCCGTGCCCCGAGCGAGGAAGGTGAAATCCCCGACGACTCTTCGCCC
GGCGGTAAAAAACAGGTCGATATGCCGACACCGGACGCTGACGCCTCCCA
CGACCAAGAAGAACATCCTTTGACGAGCTTGAGCGGCGGAGGAGGATACG
AAAGTCGCCACCGACACGCAAATTGGGTGCCGAATAGCGCCCCCGAATCA
TCTGGTGTTGTTGTTAGTGGTAGTGGTAGTGGTGTACATCACGACCGACG
GGACGGGGGTATTTCTTCCGGTAGATATGGCGATGAGGGAACGGCGTTGG
CCTCCTCCTCTTCCGCTGGGAAAGCGAGCGGGGGAATTGGGAACGGTTTT
GGAACTCTGGCTGCTGGTGGCCGATCAGCGGGATCTGCACCCCCTCGCAC
ATCATCGCAGACGCCACCCCAACAAGGTTCGGGTCCGATGAACTGGTACG
GGTCGGGAACAGAGCGGGGAAGTGGCGGTGGTGGTGCTGGATCGGGAGGT
TCATCTCTGGATCGTCGTGGTAGCAGTAGCCGGGGGAGCGGAGCCGATGG
CGGGTTGGCTCAGACTGTCGGAGGGGCGGCAGGTATTTCACGAGATTCTC
GGAGTGATGATGGAGCGAGTAGTAACAGAAGTGGCGACCGTCCTGAATGG
AGTGAAAGAGAGAGCCGGGATTCGCGCAGCCGGACGGCGTCGGGGAGCGC
GTTAGGTCGGGACGGGCGCCGTGGATCAGATCGCAACTTTCGGGATGCAG
ACGGCGGCGGCGGCCCGGGTGGTAACGGTGGTAGTGGTCGGGAATCTGAA
CGCCCGCGGTCTCCGCGCGAACGTGAACCGCGAGGTCGCTCTAGAGATCG
CGACGTTGACGATCCGCAGGTTGAGCGGAGTAGCGGCCCGGAGATTGGCG
GTCGAGGGAGCGGCATGAGCGGGTTCCCGAACCGGTTCGAGGGTCGACCT
GGCGGACCGTTCCGGCCCAATGATGCAGGCGGTATGGGTGGGCGTATGGG
CCGTCGCGGGGGAGGGATCGGCGGTCGCTGGGGCCTCGGCAATCGAGCCG
GCGGCGGGGTGAAATCCCCGACGACTCTTCGCCCGGCGGTAAAAAACAGG
TCGATATGCCGACACCGGACGCTGACGCCTCCCACGACCAAGAAGAACAT
CCTTTGACGAGCTTGAGCGGCGGAGGAGGATACGAAAGTCGCCACCGACA
CGCAAATTGGGTGCCGAATAGCGCCCCCGAATCATCTGGTGTTGTTGTTA
GTGGTAGTGGTAGTGGTGTACATCACGACCGACGGGACGGGGGTATTTCT
TCCGGTAGATATGGCGATGAGGGAACGGCGTTGGCCTCCTCCTCTTCCGC
TGGGAAAGCGAGCGGGGGAATTGGGAACGGTTTTGGAACTCTGGCTGCTG
GTGGCCGATCAGCGGGATCTGCACCCCCTCGCACATCATCGCAGACGCCA
CCCCAACAAGGTTCGGGTCCGATGAACTGGTACGGGTCGGGAACAGAGCG
GGGAAGTGGCGGTGGTGGTGCTGGATCGGGAGGTTCATCTCTGGATCGTC
GTGGTAGCAGTAGCCGGGGGAGCGGAGCCGATGGCGGGTTGGCTCAGACT
GTCGGAGGGGCGGCAGGTATTTCACGAGATTCTCGGAGTGATGATGGAGC
GAGTAGTAACAGAAGTGGCGACCGTCCTGAATGGAGTGAAAGAGAGAGCC
GGGATTCGCGCAGCCGGACGGCGTCGGGGAGCGCGTTAGGTCGGGACGGG
CGCCGTGGATCAGATCGCAACTTTCGGGATGCAGACGGCGGCGGCGGCCC
GGGTGGTAACGGTGGTAGTGGTCGGGAATCTGAACGCCCGCGGTCTCCGC
GCGAACGTGAACCGCGAGGTCGCTCTAGAGATCGCGACGTTGACGATCCG
CAGGTTGAGCGGAGTAGCGGCCCGGAGATTGGCGGTCGAGGGAGCGGCAT
GAGCGGGTTCCCGAACCGGTTCGAGGGTCGACCTGGCGGACCGTTCCGGC
CCAATGATGCAGGCGGTATGGGTGGGCGTATGGGCCGTCGCGGGGGAGGG
ATCGGCGGTCGCTGGGGCCTCGGCAATCGAGCCGGCGGCGGG back to top
|