mRNA_H-paniculata_contig15828.3387.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig15828.3387.1 vs. uniprot
Match: A0A6A3ACL1_HIBSY (Putative cyclic nucleotide-gated ion channel 8 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3ACL1_HIBSY) HSP 1 Score: 171 bits (433), Expect = 9.490e-46 Identity = 90/199 (45.23%), Postives = 126/199 (63.32%), Query Frame = 1
Query: 1 DDYSRRRKFYTLRQKSEALWALKQVERGVARANGLRVKRLRSDQGGEYTGKLFRQFCAENDV----SAAYTPQQNGVAERSWRKSFQMARSNMITANMGRRCQAEAVCSAMYCLNRAPTRPYNGGTPYKKWHGETPKLDNLRVFGCTVFVMFQSQQRRKLDDKAWAGVFLGYDEDSPSYRIHNPEHKSVQLSRNVRFDE 585
DD+SR+ Y L++KSEAL L++ + + +G +K LRSD+GGEYT KLF +FC E+ + +A YTPQQNGVAER R MARS + + R AEAV A+Y LNR PT+ TP + W G+ P + +L++FGC + Q R+KLDD+ +F+GYDE S +YR++NP K + +SR+V FDE
Sbjct: 312 DDFSRKCWIYILKEKSEALEKLREFKAMSEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTARYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHLKIFGCIAYAHVPEQTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKIIISRDVEFDE 510
BLAST of mRNA_H-paniculata_contig15828.3387.1 vs. uniprot
Match: A0A6A2WSU7_HIBSY (Integrase catalytic domain-containing protein n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WSU7_HIBSY) HSP 1 Score: 169 bits (429), Expect = 3.170e-45 Identity = 89/199 (44.72%), Postives = 124/199 (62.31%), Query Frame = 1
Query: 1 DDYSRRRKFYTLRQKSEALWALKQVERGVARANGLRVKRLRSDQGGEYTGKLFRQFCAENDV----SAAYTPQQNGVAERSWRKSFQMARSNMITANMGRRCQAEAVCSAMYCLNRAPTRPYNGGTPYKKWHGETPKLDNLRVFGCTVFVMFQSQQRRKLDDKAWAGVFLGYDEDSPSYRIHNPEHKSVQLSRNVRFDE 585
DD+SR+ Y L++KSEAL LK+ + + +G +K LRSD+GGEYT KLF +FC E+ + +A YTPQQNGVAER R MARS + + R AEAV A+Y LNR PT+ TP + W G+ P + + ++FGC + R+KLDD+ +F+GYDE S +YR++NP K + +SR+V FDE
Sbjct: 417 DDFSRKCWIYILKEKSEALEKLKEFKAMAEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTARYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHFKIFGCIAYAHVPEHTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKIIISRDVEFDE 615
BLAST of mRNA_H-paniculata_contig15828.3387.1 vs. uniprot
Match: A0A6A2WXP0_HIBSY (Phospholipase D n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WXP0_HIBSY) HSP 1 Score: 169 bits (429), Expect = 3.300e-45 Identity = 89/199 (44.72%), Postives = 125/199 (62.81%), Query Frame = 1
Query: 1 DDYSRRRKFYTLRQKSEALWALKQVERGVARANGLRVKRLRSDQGGEYTGKLFRQFCAENDV----SAAYTPQQNGVAERSWRKSFQMARSNMITANMGRRCQAEAVCSAMYCLNRAPTRPYNGGTPYKKWHGETPKLDNLRVFGCTVFVMFQSQQRRKLDDKAWAGVFLGYDEDSPSYRIHNPEHKSVQLSRNVRFDE 585
DD+SR+ Y L++KSEAL L++ + + +G +K LRSD+GGEYT KLF +FC E+ + + YTPQQNGVAER R MARS + + R AEAV A+Y LNR PT+ TP + W G+ P + +L++FGC + Q R+KLDD+ +F+GYDE S +YR++NP K + +SR+V FDE
Sbjct: 1338 DDFSRKCWIYILKEKSEALEKLREFKAMSEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTGRYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHLKIFGCIAYAHVPEQTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKIIISRDVEFDE 1536
BLAST of mRNA_H-paniculata_contig15828.3387.1 vs. uniprot
Match: A0A2I0WJT9_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WJT9_9ASPA) HSP 1 Score: 157 bits (397), Expect = 1.100e-44 Identity = 82/200 (41.00%), Postives = 119/200 (59.50%), Query Frame = 1
Query: 1 DDYSRRRKFYTLRQKSEALWALKQVERGVARANGLRVKRLRSDQGGEYTGKLFRQFCAE----NDVSAAYTPQQNGVAERSWRKSFQMARSNMITANMGRRCQAEAVCSAMYCLNRAPTRPYNGGTPYKKWHGETPKLDNLRVFGCTVFVMFQSQQRRKLDDKAWAGVFLGYDEDSPSYRIHNPEHKSVQLSRNVRFDEE 588
DDY+R Y L++KSE K + V +G ++K LRSD+GGE+ F FC E + ++ AYTPQQNGV ER R +MARS +I ++ ++ AEAV +A+Y LNR PT+ TP + W G+ P +D+ R+FGC +V Q+R KL++K G+FLGY S Y N + + + SR+V+FDE+
Sbjct: 17 DDYTRMAWVYFLKEKSETFGIFKNFKLLVENQSGQKIKILRSDRGGEFNSCQFEDFCKEEGLEHQLTVAYTPQQNGVTERKNRTVMEMARSMLIAKDIPKKFWAEAVNTAVYVLNRCPTKAVKDITPIEAWSGDKPSVDHFRIFGCLCYVHIPKQKRHKLEEKPDKGIFLGYSSQSKGYIFFNLKTQQLVTSRDVKFDED 216
BLAST of mRNA_H-paniculata_contig15828.3387.1 vs. uniprot
Match: A0A151T355_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T355_CAJCA) HSP 1 Score: 166 bits (420), Expect = 5.140e-44 Identity = 84/199 (42.21%), Postives = 122/199 (61.31%), Query Frame = 1
Query: 1 DDYSRRRKFYTLRQKSEALWALKQVERGVARANGLRVKRLRSDQGGEYTGKLFRQFCAE----NDVSAAYTPQQNGVAERSWRKSFQMARSNMITANMGRRCQAEAVCSAMYCLNRAPTRPYNGGTPYKKWHGETPKLDNLRVFGCTVFVMFQSQQRRKLDDKAWAGVFLGYDEDSPSYRIHNPEHKSVQLSRNVRFDE 585
DDY+R + L++KS+ + + V GL+VKRLRSD G EYT F++FC + + ++ YTPQQNGV+ER R +MAR + + + AEAV +++Y LN PT+ G TP++ WHG TP +++L+VFGC + + +R KLD K+ G+FLGY S YRI+NP K + +SRNV+FDE
Sbjct: 482 DDYTRMSWVFFLKKKSDVFANFLKFKFMVENETGLQVKRLRSDNGTEYTAGEFKKFCEQVGIQHQLTVPYTPQQNGVSERKNRTVMEMARCLLFEKGLPKTFWAEAVNTSVYLLNLLPTKALKGNTPFEAWHGRTPSVEHLKVFGCVCYALVPEVKRDKLDQKSEVGIFLGYSSYSKGYRIYNPATKKILVSRNVKFDE 680
BLAST of mRNA_H-paniculata_contig15828.3387.1 vs. uniprot
Match: A0A6D2IM54_9BRAS (Uncharacterized protein n=2 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2IM54_9BRAS) HSP 1 Score: 165 bits (417), Expect = 1.310e-43 Identity = 86/199 (43.22%), Postives = 126/199 (63.32%), Query Frame = 1
Query: 1 DDYSRRRKFYTLRQKSEALWALKQVERGVARANGLRVKRLRSDQGGEYTGKLFRQFCAENDV----SAAYTPQQNGVAERSWRKSFQMARSNMITANMGRRCQAEAVCSAMYCLNRAPTRPYNGGTPYKKWHGETPKLDNLRVFGCTVFVMFQSQQRRKLDDKAWAGVFLGYDEDSPSYRIHNPEHKSVQLSRNVRFDE 585
DDYSR+ + L +KSEAL A K+ + R GL + LRSD+GGEY F+ +C EN + +AAYTPQQNG+AER R MAR M+ ++ RR EAV A++ LNR+P+ TP ++W P ++++RVFGC + + ++R KLD+K+ VF+G ++S +YR++NPE K + +SR+VRFDE
Sbjct: 526 DDYSRKCWSFLLAEKSEALRAFKEFKVAAEREMGLSLVSLRSDRGGEYNSAAFQDYCRENGIKRQLTAAYTPQQNGIAERKNRSIMNMARCMMLGMSVPRRFWPEAVQYAVHVLNRSPSAALGDVTPDERWSNHKPSVEHVRVFGCVAYALVPYERRVKLDEKSIQCVFVGVSKESKAYRLYNPETKKIIISRDVRFDE 724
BLAST of mRNA_H-paniculata_contig15828.3387.1 vs. uniprot
Match: A0A6D2I006_9BRAS (Integrase catalytic domain-containing protein n=2 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2I006_9BRAS) HSP 1 Score: 160 bits (404), Expect = 5.180e-42 Identity = 84/199 (42.21%), Postives = 123/199 (61.81%), Query Frame = 1
Query: 1 DDYSRRRKFYTLRQKSEALWALKQVERGVARANGLRVKRLRSDQGGEYTGKLFRQFCAENDV----SAAYTPQQNGVAERSWRKSFQMARSNMITANMGRRCQAEAVCSAMYCLNRAPTRPYNGGTPYKKWHGETPKLDNLRVFGCTVFVMFQSQQRRKLDDKAWAGVFLGYDEDSPSYRIHNPEHKSVQLSRNVRFDE 585
DD+SR+ + L +KSEAL K+ + GV R +G + LR+D+GGEY K F +FC EN + +AAYTPQQNGVAER R M R ++ ++ RR AEAV A++ LNR+P+ TP +KW P ++ L++FGC F + ++R KLD+K+ V G ++S +YR++NP K + +SR+V FDE
Sbjct: 53 DDFSRKCWTFLLTEKSEALQVFKEFKAGVERESGQPLVCLRTDRGGEYCSKAFEEFCRENGIKRQLTAAYTPQQNGVAERKNRSVMNMTRCMLLEMSVPRRFWAEAVQYAVHILNRSPSAALGDITPEEKWSQHKPSVEYLKIFGCVAFALVPYERRIKLDEKSVKCVLFGLSKESKAYRLYNPVTKKIVISRDVHFDE 251
BLAST of mRNA_H-paniculata_contig15828.3387.1 vs. uniprot
Match: A0A4Y1QWW3_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1QWW3_PRUDU) HSP 1 Score: 159 bits (403), Expect = 8.740e-42 Identity = 83/199 (41.71%), Postives = 122/199 (61.31%), Query Frame = 1
Query: 1 DDYSRRRKFYTLRQKSEALWALKQVERGVARANGLRVKRLRSDQGGEYTGKLFRQFCAEN----DVSAAYTPQQNGVAERSWRKSFQMARSNMITANMGRRCQAEAVCSAMYCLNRAPTRPYNGGTPYKKWHGETPKLDNLRVFGCTVFVMFQSQQRRKLDDKAWAGVFLGYDEDSPSYRIHNPEHKSVQLSRNVRFDE 585
DD+SR Y L QKSEA KQ + +G +K LR+D+GGE+T F ++C N +++A YTPQQNGVAER R +MARS + ++ AEA+ +A++ LNR+PT+ TP++ WH PK+D ++FGCT + SQ+R K D+K +F+GY + S +YR+ +P KS+ +SR+V FDE
Sbjct: 210 DDFSRMMWVYFLEQKSEAFSVFKQFKAFGENQSGHNLKVLRTDRGGEFTSNEFSEYCKSNGIKRELTARYTPQQNGVAERRNRTIVEMARSMLKAKSLPNTFWAEAIHTAVFILNRSPTKAVKDKTPFEAWHRFKPKVDFFKIFGCTAYAHIPSQKREKFDEKGEKYIFVGYSDQSKAYRLIDPRTKSLVISRDVIFDE 408
BLAST of mRNA_H-paniculata_contig15828.3387.1 vs. uniprot
Match: A0A4Y1R9H3_PRUDU (Transposable element protein (Fragment) n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1R9H3_PRUDU) HSP 1 Score: 159 bits (403), Expect = 9.850e-42 Identity = 83/199 (41.71%), Postives = 122/199 (61.31%), Query Frame = 1
Query: 1 DDYSRRRKFYTLRQKSEALWALKQVERGVARANGLRVKRLRSDQGGEYTGKLFRQFCAEN----DVSAAYTPQQNGVAERSWRKSFQMARSNMITANMGRRCQAEAVCSAMYCLNRAPTRPYNGGTPYKKWHGETPKLDNLRVFGCTVFVMFQSQQRRKLDDKAWAGVFLGYDEDSPSYRIHNPEHKSVQLSRNVRFDE 585
DD+SR Y L QKSEA KQ + +G +K LR+D+GGE+T F ++C N +++A YTPQQNGVAER R +MARS + ++ AEA+ +A++ LNR+PT+ TP++ WH PK+D ++FGCT + SQ+R K D+K +F+GY + S +YR+ +P KS+ +SR+V FDE
Sbjct: 447 DDFSRMMWVYFLEQKSEAFSVFKQFKAFGENQSGHNLKVLRTDRGGEFTSNEFSEYCKSNGIKRELTARYTPQQNGVAERRNRTIVEMARSMLKAKSLPNTFWAEAIHTAVFILNRSPTKAVKDKTPFEAWHRFKPKVDFFKIFGCTAYAHIPSQKREKFDEKGEKYIFVGYSDQSKAYRLIDPRTKSLVISRDVIFDE 645
BLAST of mRNA_H-paniculata_contig15828.3387.1 vs. uniprot
Match: A0A4Y2LAF7_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2LAF7_ARAVE) HSP 1 Score: 152 bits (383), Expect = 3.220e-41 Identity = 87/199 (43.72%), Postives = 114/199 (57.29%), Query Frame = 1
Query: 1 DDYSRRRKFYTLRQKSEALWALKQVERGVARANGLRVKRLRSDQGGEYTGKLFRQFCAENDV----SAAYTPQQNGVAERSWRKSFQMARSNMITANMGRRCQAEAVCSAMYCLNRAPTRPYNGGTPYKKWHGETPKLDNLRVFGCTVFVMFQSQQRRKLDDKAWAGVFLGYDEDSPSYRIHNPEHKSVQLSRNVRFDE 585
DDYSR Y L +K E L LK+ G +K LR+D GG+Y GK F E + + Y+PQQNGV+ER R +MAR + AN+ +R AEA +A Y NR PT+P TPY W P L ++RVFGC + Q Q+RRKLDDKA G+FLGYD S YRI+ ++K + +SR V+F+E
Sbjct: 34 DDYSRYSIIYLLSKKDEVLSKLKEYVAMTRNKFGRTLKVLRNDNGGKYIGKEIEDFLKEQGIVHQLTVPYSPQQNGVSERKNRTLIEMARCLLSDANLSQRFWAEAAMTATYLQNRLPTKPKRK-TPYVLWANRKPDLSHIRVFGCKAYACIQKQKRRKLDDKAVEGIFLGYDYRSKGYRIYLGDNK-IMISRTVKFNE 230 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15828.3387.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15828.3387.1 >prot_H-paniculata_contig15828.3387.1 ID=prot_H-paniculata_contig15828.3387.1|Name=mRNA_H-paniculata_contig15828.3387.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=196bp DDYSRRRKFYTLRQKSEALWALKQVERGVARANGLRVKRLRSDQGGEYTGback to top mRNA from alignment at H-paniculata_contig15828:4632..5231- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15828.3387.1 ID=mRNA_H-paniculata_contig15828.3387.1|Name=mRNA_H-paniculata_contig15828.3387.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=600bp|location=Sequence derived from alignment at H-paniculata_contig15828:4632..5231- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15828:4632..5231- >mRNA_H-paniculata_contig15828.3387.1 ID=mRNA_H-paniculata_contig15828.3387.1|Name=mRNA_H-paniculata_contig15828.3387.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1176bp|location=Sequence derived from alignment at H-paniculata_contig15828:4632..5231- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |