mRNA_H-paniculata_contig15788.3356.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig15788.3356.1 vs. uniprot
Match: A0A6H5JH17_9PHAE (Clu domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JH17_9PHAE) HSP 1 Score: 313 bits (801), Expect = 6.580e-95 Identity = 169/234 (72.22%), Postives = 186/234 (79.49%), Query Frame = 1
Query: 1 GHIPAANPTETESSHVFVFNNIFFSFAADSPDAYKAVSGEAAARKSASQDLASVVALNSLSEAFHPQLSIKTLATTVVDYSGRRMIAQSLVPGILNGDQTNKVVYGAMEHGQPLRSNKEVSELLRQVGHRLMIAEREMDAVPIKGTGGAATKKLSAKGAAGAATESKKEQEEMTAEGEYPDETPATVTVTGAVEMKGIVGSDGRSYLLDVSRLTPRDANWVRGEKGTKVYDEWM 702
G IP ANPTE E SHVFVFNNIFFS+AADSPDAYKAVSG++AARKSASQDLASVVALN L EA HPQLSIKTLAT VVD+ GRR+IAQSLVPGILNGDQTNKVVYGAMEHGQPLR N +VS LL+ VG RLMIAERE+DAVPIK S+ + E ++ + E + PATV +TGAVEMKGIVGSDGRSYLLDVSR+TPRDANWVRG KGT Y+EWM
Sbjct: 446 GFIPPANPTEAEHSHVFVFNNIFFSYAADSPDAYKAVSGDSAARKSASQDLASVVALNLLGEAVHPQLSIKTLATAVVDFGGRRLIAQSLVPGILNGDQTNKVVYGAMEHGQPLRENDKVSSLLKDVGQRLMIAEREIDAVPIK------KPPFSSSSTSAGGVEESAQKTSPGSGDETAESAPATVKITGAVEMKGIVGSDGRSYLLDVSRVTPRDANWVRGAKGTGGYNEWM 673
BLAST of mRNA_H-paniculata_contig15788.3356.1 vs. uniprot
Match: A0A7S2S3S9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S3S9_9STRA) HSP 1 Score: 166 bits (420), Expect = 1.780e-43 Identity = 106/243 (43.62%), Postives = 140/243 (57.61%), Query Frame = 1
Query: 1 GHIPAANPTETESSHVFVFNNIFFSFAADSPDAYKAVSGEAAARKSASQDLASVVALNSLSEA--------------------FHPQLSIKTLATTVVDY--SGRRMIAQSLVPGILNGDQTNKVVYGAMEHGQPLRSNKEVSELLRQVGHRLMIAEREMDAVPIKGTGGAATKKLSAKGAAGAATESKKEQEEMTAEGEYPDETPATVTVTGAVEMKGIVGSDGRSYLLDVSRLTPRDANWV 663
GH+ NPTE +HV+VFNN+FFS+A DS D YK G+ AA KSA DL ++ ++ L A P + TLATT+VD +GRR++AQS+VPGIL + +K+VYGA+EHG +++ ++ L+ V + IA RE++AVP+K G + +A AATE E P VTV GAVEMKGIVGSDGR Y+LDV RL+PRDANWV
Sbjct: 5 GHVTPINPTEPSRNHVYVFNNMFFSYAVDSKDGYKVFKGDEAAAKSARHDLRNISLIDRLQRAAVEPPSDQPEDAAEVSPPAVVPPGHRLCTLATTLVDLPCAGRRIVAQSIVPGILQSENLSKLVYGAIEHGHEYKADPDMVTLVGAVTDKFNIAPREIEAVPLKKEDGPPGPEKAA-----AATE------------EDGGTEPGPVTVCGAVEMKGIVGSDGRKYVLDVVRLSPRDANWV 230
BLAST of mRNA_H-paniculata_contig15788.3356.1 vs. uniprot
Match: A0A7S2S3S6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S3S6_9STRA) HSP 1 Score: 166 bits (420), Expect = 2.010e-43 Identity = 106/243 (43.62%), Postives = 140/243 (57.61%), Query Frame = 1
Query: 1 GHIPAANPTETESSHVFVFNNIFFSFAADSPDAYKAVSGEAAARKSASQDLASVVALNSLSEA--------------------FHPQLSIKTLATTVVDY--SGRRMIAQSLVPGILNGDQTNKVVYGAMEHGQPLRSNKEVSELLRQVGHRLMIAEREMDAVPIKGTGGAATKKLSAKGAAGAATESKKEQEEMTAEGEYPDETPATVTVTGAVEMKGIVGSDGRSYLLDVSRLTPRDANWV 663
GH+ NPTE +HV+VFNN+FFS+A DS D YK G+ AA KSA DL ++ ++ L A P + TLATT+VD +GRR++AQS+VPGIL + +K+VYGA+EHG +++ ++ L+ V + IA RE++AVP+K G + +A AATE E P VTV GAVEMKGIVGSDGR Y+LDV RL+PRDANWV
Sbjct: 639 GHVTPINPTEPSRNHVYVFNNMFFSYAVDSKDGYKVFKGDEAAAKSARHDLRNISLIDRLQRAAVEPPSDQPEDAAEVSPPAVVPPGHRLCTLATTLVDLPCAGRRIVAQSIVPGILQSENLSKLVYGAIEHGHEYKADPDMVTLVGAVTDKFNIAPREIEAVPLKKEDGPPGPEKAA-----AATE------------EDGGTEPGPVTVCGAVEMKGIVGSDGRKYVLDVVRLSPRDANWV 864
BLAST of mRNA_H-paniculata_contig15788.3356.1 vs. uniprot
Match: A0A7S2D7Q1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D7Q1_9STRA) HSP 1 Score: 157 bits (397), Expect = 2.450e-40 Identity = 102/260 (39.23%), Postives = 140/260 (53.85%), Query Frame = 1
Query: 1 GHIPAANPTETESSHVFVFNNIFFSFAADSPDAYKAVSGEAAARKSASQDLASVVALNSLSEAF-------------------------HPQLSIKTLATTVVDY--SGRRMIAQSLVPGILNGDQTNKVVYGAMEHGQPLRSNKEVSELLRQVGHRLMIAEREMDAVPIKGTGGAATKKLSAKGAAGAATESKKEQEEMTAEGEYPDETPATVTVTGAVEMKGIVGSDGRSYLLDVSRLTPRDANWV-RGEKGTKVYDE 696
GH+P NPTE HV+VFNN+FFS+ DS DAYK + G+ AA KSA DL +V L+ P + TLAT +VD +G+R++AQS++PGIL GDQ +K+VYGA+EHG + + + LL +V +L IA R + A+P+ A + + G + K E+EE V + AVE+KGI GSDGR Y LD+ RLTPRDANW+ + GT V++E
Sbjct: 679 GHVPPINPTEPTRQHVYVFNNLFFSYGVDSKDAYKVLGGDGAAVKSARHDLRNVQLLDYYQRTIGLGTVDKEKDDVTPPTGCFAEPGTVSPDERLCTLATAIVDLPCAGKRLVAQSIIPGILQGDQLSKLVYGAIEHGVKYKVDPGMKNLLDEVASKLYIAPRTIAAIPMPA---AKDDPIQSGQLNGVDSVDKDEEEEE------------VVGICNAVELKGICGSDGRKYALDILRLTPRDANWLPKASGGTGVFEE 923
BLAST of mRNA_H-paniculata_contig15788.3356.1 vs. uniprot
Match: A0A7S1ZYD8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZYD8_9STRA) HSP 1 Score: 150 bits (378), Expect = 2.890e-40 Identity = 100/234 (42.74%), Postives = 143/234 (61.11%), Query Frame = 1
Query: 1 GHIPAANPTETESSHVFVFNNIFFSFAADSP-DAYKAVSGEAAARKSASQDLASVVALNSLSEAFHPQLSIKTLATTVVDYSGRRMIAQSLVPGILNGDQTNKVVYGAMEHGQPLRSNKEVSELLR-QVGHRLMIAEREMDAVPIKGTGGAATKKLSAKGAAGAATESKKEQEEMTAEGEYPDETPATVTVTGAVEMKGIVGSDGRSYLLDVSRLTPRDANWV-RGEKGTKVYD 693
GH+ NP E SHV++ NNIFFS A D+ D +K G+ AARKSAS+D + + AL L P+L TLAT +VDY G R++ QS+VPGIL+G++T+ ++YGA+E PL +KE+ +LL +G LM+A R + +P+ + +KL A E+ + E EG+ P T + G +E+K I GSD R Y+LD++RLTPRDANWV + E GT V++
Sbjct: 39 GHVTPMNPNEPTRSHVYLHNNIFFSRAVDAGVDTFKITQGDKAARKSASRDASCMGALFKLDI---PELH--TLATVLVDYLGTRLVCQSVVPGILHGERTHTLLYGAVEATSPLVWDKEMHDLLETSLGKGLMVATRPVPTLPLSDERMSEIEKLKT-----VALEAINKDVEEKTEGKSP-----TTNICGPIEVKAIRGSDQRKYVLDLTRLTPRDANWVPKSEGGTGVWE 257
BLAST of mRNA_H-paniculata_contig15788.3356.1 vs. uniprot
Match: A0A836CKQ1_9STRA (Clustered mitochondria-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKQ1_9STRA) HSP 1 Score: 156 bits (395), Expect = 4.450e-40 Identity = 101/248 (40.73%), Postives = 143/248 (57.66%), Query Frame = 1
Query: 1 GHIPAANPTETESSHVFVFNNIFFSFAADSPDAYKAVSGEAAARKSASQDLASVVALNSLSEAFHPQLSIKTLATTVVDYSGRRMIAQSLVPGILNGDQTNKVVYGAMEHGQPLRSNKEVSELLRQVGHRLMIAEREMDAVPI---KGTGGAATKKLSAKGAAGAATESKKEQEEMTAEGEYPDETPAT-------VTVTGAVEMKGIVGSDGRSYLLDVSRLTPRDANWVRGE----KGTKVYDEWM 702
G++ N E+ SHV+VFNNIFFS A D+ + +AV+G+ A KSA DL +V A++ + TLA VVDY GRR++AQS++PGIL GD T K+VYGA+E PL+ + ++ E LR++ +L+IAER + A+P+ +G G KK G +K + V++ GAVE+KGI G D R Y+++V RLTPRDANWV G+ KGT VY +W+
Sbjct: 471 GYVTPINGMESPRSHVYVFNNIFFSNALDTKEGGRAVNGDPMAHKSALHDLHNVKAISMFETP-----GLHTLAMAVVDYLGRRIVAQSVIPGILQGDSTFKLVYGAVEPSHPLKLDADMHEQLRKLAPKLLIAERTLPAIPMPAAEGEGEEGGKKEKEGGEGXXXXXXQKGEXXXXXXXXXXXXXXXXXXXGDQEVSLCGAVELKGIEGYDARRYIMEVIRLTPRDANWVDGDGSEHKGTGVYTDWL 713
BLAST of mRNA_H-paniculata_contig15788.3356.1 vs. uniprot
Match: A0A7S2KYX4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KYX4_9STRA) HSP 1 Score: 152 bits (384), Expect = 1.310e-38 Identity = 92/225 (40.89%), Postives = 138/225 (61.33%), Query Frame = 1
Query: 1 GHIPAANPTETESSHVFVFNNIFFSFAADSP--DAYKAVSGEAAARKSASQDLASVVALNSLS-EAFHPQLSIKTLATTVVDYSGRRMIAQSLVPGILNGDQTNKVVYGAMEHGQPLRSNKEVSELLRQ-VGHRLMIAEREMDAVPIKGTGGAATKKLSAKGAAGAATESKKEQEEMTAEGEYPDETPATVTVTGAVEMKGIVGSDGRSYLLDVSRLTPRDANWV 663
GHI NP E+ SHV++ NNIFFS A D+ D Y+ +G+ AARK+AS+D +++ L+ L E H +L T ++DY G R++ QS++PG+L+G+ +KV+YGA+E G PL S+ ++ +L+ +G I R + VP+ AA K +K A A+ K E E ++TP TV + G +E+KGI+G+D R Y+LD++RL PRDANWV
Sbjct: 495 GHITPMNPNESARSHVYLHNNIFFSRALDNGMYDTYRVATGDNAARKAASRDASTIGILHRLDVEGLH------SLGTVILDYLGTRLVCQSVIPGLLHGENCHKVIYGAVETGSPLASDADMHKLMEDTIGKNYWIGSRAVPTVPLSDERVAAAKAALSKTLALASLSPTKRG--SITESEAKEDTPPTVPICGPMEVKGILGADNRRYVLDLARLAPRDANWV 711
BLAST of mRNA_H-paniculata_contig15788.3356.1 vs. uniprot
Match: A0A7S4SDJ8_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SDJ8_9STRA) HSP 1 Score: 150 bits (378), Expect = 8.020e-38 Identity = 100/234 (42.74%), Postives = 143/234 (61.11%), Query Frame = 1
Query: 1 GHIPAANPTETESSHVFVFNNIFFSFAADSP-DAYKAVSGEAAARKSASQDLASVVALNSLSEAFHPQLSIKTLATTVVDYSGRRMIAQSLVPGILNGDQTNKVVYGAMEHGQPLRSNKEVSELLR-QVGHRLMIAEREMDAVPIKGTGGAATKKLSAKGAAGAATESKKEQEEMTAEGEYPDETPATVTVTGAVEMKGIVGSDGRSYLLDVSRLTPRDANWV-RGEKGTKVYD 693
GH+ NP E SHV++ NNIFFS A D+ D +K G+ AARKSAS+D + + AL L P+L TLAT +VDY G R++ QS+VPGIL+G++T+ ++YGA+E PL +KE+ +LL +G LM+A R + +P+ + +KL A E+ + E EG+ P T + G +E+K I GSD R Y+LD++RLTPRDANWV + E GT V++
Sbjct: 170 GHVTPMNPNEPTRSHVYLHNNIFFSRAVDAGVDTFKITQGDKAARKSASRDASCMGALFKLDI---PELH--TLATVLVDYLGTRLVCQSVVPGILHGERTHTLLYGAVEATSPLVWDKEMHDLLETSLGKGLMVATRPVPTLPLSDERMSEIEKLKT-----VALEAINKDGEEKTEGKSP-----TTNICGPIEVKAIRGSDQRKYVLDLTRLTPRDANWVPKSEGGTGVWE 388
BLAST of mRNA_H-paniculata_contig15788.3356.1 vs. uniprot
Match: G4ZAU5_PHYSP (Clustered mitochondria protein homolog n=5 Tax=Phytophthora TaxID=4783 RepID=G4ZAU5_PHYSP) HSP 1 Score: 149 bits (375), Expect = 2.080e-37 Identity = 95/232 (40.95%), Postives = 139/232 (59.91%), Query Frame = 1
Query: 1 GHIPAANPTETESSHVFVFNNIFFSFAADSPDAYKAVSGEAAARKSASQDLASVVALNSLSEAFHPQLSIKTLATTVVDYSGRRMIAQSLVPGILNGDQTNKVVYGAMEHGQPLRSNKEVSELLRQVGHRLMIAEREMDAVPIKGTGGAATKKLSAKGAAGAATESKKEQEEMTAEGEYPDETPATVTVTGAVEMKGIVGSDGRSYLLDVSRLTPRDANWVRGEKGTKVYDE 696
G+IP NP + +S+HV+VFNNIFFS + D A K GE A +A++DL V A N + + TLATTVVDY G R+IAQSL+PGIL GD +K+VYG+++HG+ + +N + EL+ + G +L IAER + +P+ G + ++L+A+ KEQE + + + T+ GAVE KGI GSDGR Y+LD+ R+TP+D + + + K E
Sbjct: 464 GNIPPINPMDDKSAHVYVFNNIFFSVSIDGK-ATKEDGGEENAYSAANRDLQGVKAFNEVDVR-----GLHTLATTVVDYLGVRVIAQSLIPGILLGDAASKLVYGSVDHGKTIAANSSMHELMLKAGEKLHIAERSI--IPL----GKSDEELAAE----------KEQESLGVTVSGGEASTDVATICGAVEAKGIQGSDGRQYVLDLVRITPKDWTFYKNREAAKKNTE 673
BLAST of mRNA_H-paniculata_contig15788.3356.1 vs. uniprot
Match: M4BM91_HYAAE (Clu domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BM91_HYAAE) HSP 1 Score: 148 bits (374), Expect = 2.840e-37 Identity = 94/220 (42.73%), Postives = 131/220 (59.55%), Query Frame = 1
Query: 1 GHIPAANPTETESSHVFVFNNIFFSFAADSPDAYKAVSGEAAARKSASQDLASVVALNSLSEAFHPQLSIKTLATTVVDYSGRRMIAQSLVPGILNGDQTNKVVYGAMEHGQPLRSNKEVSELLRQVGHRLMIAEREMDAVPIKGTGGAATKKLSAKGAAGAATESKKEQEEMTAEGEYPDETPATV---TVTGAVEMKGIVGSDGRSYLLDVSRLTPRD 651
G+IP NP + ES+HV+VFNNIFFS + D A G+ A +A++DL V A N + + TLATTVVDY G R+IAQSL+PGIL GD +K+VYG+++HG+ + +N ++ L+ + G +L IAER + + G + K L+A +EE A G P+ AT T+ GAVE KGI GSDGR Y+LD+ R+TP+D
Sbjct: 463 GNIPPINPMDDESTHVYVFNNIFFSVSNDGKPIKDAAQGDENAYSAANRDLVGVKAFNEVDVC-----GLHTLATTVVDYLGVRVIAQSLIPGILIGDSASKLVYGSVDHGKTIAANSKMHALMLEAGSKLHIAERTIKPL------GKSEKDLAA-------------EEEQKALGVAPESGEATTDPTTICGAVEAKGIQGSDGRLYVLDLVRITPKD 658 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15788.3356.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15788.3356.1 >prot_H-paniculata_contig15788.3356.1 ID=prot_H-paniculata_contig15788.3356.1|Name=mRNA_H-paniculata_contig15788.3356.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=234bp GHIPAANPTETESSHVFVFNNIFFSFAADSPDAYKAVSGEAAARKSASQDback to top mRNA from alignment at H-paniculata_contig15788:1359..3784- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15788.3356.1 ID=mRNA_H-paniculata_contig15788.3356.1|Name=mRNA_H-paniculata_contig15788.3356.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2426bp|location=Sequence derived from alignment at H-paniculata_contig15788:1359..3784- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15788:1359..3784- >mRNA_H-paniculata_contig15788.3356.1 ID=mRNA_H-paniculata_contig15788.3356.1|Name=mRNA_H-paniculata_contig15788.3356.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1404bp|location=Sequence derived from alignment at H-paniculata_contig15788:1359..3784- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |