mRNA_H-paniculata_contig15425.3180.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig15425.3180.1 vs. uniprot
Match: A0A6H5L164_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L164_9PHAE) HSP 1 Score: 165 bits (417), Expect = 1.130e-45 Identity = 79/85 (92.94%), Postives = 80/85 (94.12%), Query Frame = 1 Query: 1 EVPGDESWVSPYSSLGPAAKYVTFEPDCAGWNNVRMAFETVVVFAYVTGRTLVMPPVKQRLHGLPQSGAGNRVGFFAYLQVGARE 255 EVPGDESWVSPYSSLGPAAKYVTFEPDCAGWNNVRMAFETVVVFAYVTGRTLVMPPVKQRLHGLPQS AG RVGFFAY Q+ A E Sbjct: 346 EVPGDESWVSPYSSLGPAAKYVTFEPDCAGWNNVRMAFETVVVFAYVTGRTLVMPPVKQRLHGLPQSQAGERVGFFAYYQMEAVE 430
BLAST of mRNA_H-paniculata_contig15425.3180.1 vs. uniprot
Match: F0YC72_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC72_AURAN) HSP 1 Score: 92.0 bits (227), Expect = 7.510e-20 Identity = 46/67 (68.66%), Postives = 51/67 (76.12%), Query Frame = 1 Query: 16 ESWVSPYSSLGPAAKYVTFEPDCAGWNNVRMAFETVVVFAYVTGRTLVMPPVKQRLHGLPQSGAGNR 216 E VSPY+ GP+AKYVTFEPD GWNN+RMAFETV VFA+ TGRTLVMPP QRL+ L GNR Sbjct: 392 EPRVSPYADYGPSAKYVTFEPDNGGWNNIRMAFETVAVFAHATGRTLVMPPA-QRLYLLKVQHEGNR 457
BLAST of mRNA_H-paniculata_contig15425.3180.1 vs. uniprot
Match: D7FR32_ECTSI (GDP-fucose protein O-fucosyltransferase, family GT65 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR32_ECTSI) HSP 1 Score: 89.4 bits (220), Expect = 3.940e-19 Identity = 44/50 (88.00%), Postives = 45/50 (90.00%), Query Frame = 1 Query: 106 MAFETVVVFAYVTGRTLVMPPVKQRLHGLPQSGAGNRVGFFAYLQVGARE 255 MAFETVVVFAYVTGRTLVMPPVKQRLHGLPQS AG RVGFFAY Q+ A E Sbjct: 1 MAFETVVVFAYVTGRTLVMPPVKQRLHGLPQSQAGERVGFFAYYQMEAVE 50
BLAST of mRNA_H-paniculata_contig15425.3180.1 vs. uniprot
Match: A0A8J2SM68_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SM68_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 6.890e-17 Identity = 40/66 (60.61%), Postives = 48/66 (72.73%), Query Frame = 1 Query: 16 ESWVSPYSSLGPAAKYVTFEPDCAGWNNVRMAFETVVVFAYVTGRTLVMPPVKQRLHGLPQSGAGN 213 E+ SPY+ GP KY+TFEPD GWNN+RMAFET+ V A+ TGR LVMPP QRL+ L + AGN Sbjct: 154 ETHASPYAGYGPKRKYLTFEPDAGGWNNIRMAFETLAVLAHATGRVLVMPP-PQRLYLLKVTHAGN 218
BLAST of mRNA_H-paniculata_contig15425.3180.1 vs. uniprot
Match: W7U3X1_9STRA (Fucosyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3X1_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 3.240e-16 Identity = 37/54 (68.52%), Postives = 43/54 (79.63%), Query Frame = 1 Query: 7 PGDESWVSPYSSLGPAAKYVTFEPDCAGWNNVRMAFETVVVFAYVTGRTLVMPP 168 P E V+P+++LGP KYVTFEPD GWNN+RMA E V+VFAY TGRTLVMPP Sbjct: 164 PDLEKVVNPWAALGPEKKYVTFEPDRGGWNNIRMAMEVVLVFAYATGRTLVMPP 217
BLAST of mRNA_H-paniculata_contig15425.3180.1 vs. uniprot
Match: A0A7S3H5B6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H5B6_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 3.320e-16 Identity = 34/47 (72.34%), Postives = 37/47 (78.72%), Query Frame = 1 Query: 28 SPYSSLGPAAKYVTFEPDCAGWNNVRMAFETVVVFAYVTGRTLVMPP 168 SPY GPA KYVTFEPD GWNN+RM E V+VFAY TGRTLV+PP Sbjct: 1 SPYLHHGPAVKYVTFEPDVGGWNNIRMQMELVLVFAYATGRTLVLPP 47
BLAST of mRNA_H-paniculata_contig15425.3180.1 vs. uniprot
Match: A0A482S0N0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S0N0_9ARCH) HSP 1 Score: 76.3 bits (186), Expect = 2.510e-14 Identity = 40/79 (50.63%), Postives = 51/79 (64.56%), Query Frame = 1 Query: 31 PYSSLGPAAKYVTFEPDCAGWNNVRMAFETVVVFAYVTGRTLVMPPVKQRLHGLPQSGAGNR-----VGFFAYLQVGAR 252 PY GP KYVTFEPD GWNN+RM E V+VFAY TGRTLV+PP Q ++ L Q+G G++ FF + ++ R Sbjct: 91 PYIDYGPRVKYVTFEPDVGGWNNIRMQMELVLVFAYATGRTLVLPP-DQPMY-LLQAGKGHQKAHSFADFFPFEKIQER 167
BLAST of mRNA_H-paniculata_contig15425.3180.1 vs. uniprot
Match: A0A7S2KT07_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KT07_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 1.180e-13 Identity = 39/79 (49.37%), Postives = 52/79 (65.82%), Query Frame = 1 Query: 13 DESWVSPYSSLGPA-AKYVTFEPDCAGWNNVRMAFETVVVFAYVTGRTLVMPPVKQRLHGLPQSGAGNRV-GFFAYLQV 243 D ++VSP++S + +Y+TFEPD GWNN+RMA ETV+VFA TGRTLV+PP QSG G + GF +L + Sbjct: 55 DVNFVSPFASADTSETRYITFEPDRGGWNNIRMALETVLVFAAATGRTLVLPPNTPFYRLTDQSGKGAKHHGFADFLDL 133
BLAST of mRNA_H-paniculata_contig15425.3180.1 vs. uniprot
Match: A0A7S2L6Y3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L6Y3_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 2.270e-13 Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 1 Query: 1 EVPGDESWVSPYSSLGPAAKYVTFEPDCAGWNNVRMAFETVVVFAYVTGRTLVMPPVKQ 177 ++P D ++SP+ G KY+TFEPD GWNN+RMA ETV+V A+ GRTLV+PP K+ Sbjct: 137 DIPSDSKYISPFFEAG-NEKYMTFEPDGGGWNNIRMAMETVIVMAHAMGRTLVLPPEKR 194
BLAST of mRNA_H-paniculata_contig15425.3180.1 vs. uniprot
Match: A0A6S7ZGN1_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S7ZGN1_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 2.280e-13 Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 1 Query: 4 VPGDESWVSPYSSLGPAAKYVTFEPDCAGWNNVRMAFETVVVFAYVTGRTLVMPPVKQRLHGLPQS 201 +P D+ W SPY +LGP KY+ FEPD GWNN+R+ FE + A+ TGRT V+PP + R++ L +S Sbjct: 159 LPKDKVWESPYKNLGPKNKYLLFEPDEGGWNNLRLGFEANLALAFATGRTFVLPP-RDRVYLLKKS 223 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15425.3180.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15425.3180.1 >prot_H-paniculata_contig15425.3180.1 ID=prot_H-paniculata_contig15425.3180.1|Name=mRNA_H-paniculata_contig15425.3180.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=85bp EVPGDESWVSPYSSLGPAAKYVTFEPDCAGWNNVRMAFETVVVFAYVTGRback to top mRNA from alignment at H-paniculata_contig15425:391..645- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15425.3180.1 ID=mRNA_H-paniculata_contig15425.3180.1|Name=mRNA_H-paniculata_contig15425.3180.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=255bp|location=Sequence derived from alignment at H-paniculata_contig15425:391..645- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15425:391..645- >mRNA_H-paniculata_contig15425.3180.1 ID=mRNA_H-paniculata_contig15425.3180.1|Name=mRNA_H-paniculata_contig15425.3180.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=510bp|location=Sequence derived from alignment at H-paniculata_contig15425:391..645- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |