mRNA_H-paniculata_contig15423.3179.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig15423.3179.1 vs. uniprot
Match: D7FLX8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLX8_ECTSI) HSP 1 Score: 115 bits (289), Expect = 1.920e-29 Identity = 58/59 (98.31%), Postives = 59/59 (100.00%), Query Frame = 1 Query: 1 QVVENFDSMGLKDELLRGVYAYGFERPSAVQQRAVKPITSGRDVIAQSQSGTGKTAVFS 177 +VVENFDSMGLKDELLRGVYAYGFERPSAVQQRAVKPITSGRDVIAQSQSGTGKTAVFS Sbjct: 26 EVVENFDSMGLKDELLRGVYAYGFERPSAVQQRAVKPITSGRDVIAQSQSGTGKTAVFS 84
BLAST of mRNA_H-paniculata_contig15423.3179.1 vs. uniprot
Match: R1DVI5_EMIHU (Q_MOTIF domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DVI5_EMIHU) HSP 1 Score: 100 bits (249), Expect = 1.980e-26 Identity = 45/59 (76.27%), Postives = 54/59 (91.53%), Query Frame = 1 Query: 1 QVVENFDSMGLKDELLRGVYAYGFERPSAVQQRAVKPITSGRDVIAQSQSGTGKTAVFS 177 Q+VE+FD+MGLKDELLRG+YAYGFE+PSA+QQRA+ PI GRD IAQ+QSGTGKT +FS Sbjct: 16 QIVESFDAMGLKDELLRGIYAYGFEKPSAIQQRAIMPILKGRDTIAQAQSGTGKTTIFS 74
BLAST of mRNA_H-paniculata_contig15423.3179.1 vs. uniprot
Match: A0A7S2WT78_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WT78_9STRA) HSP 1 Score: 102 bits (253), Expect = 1.110e-24 Identity = 48/59 (81.36%), Postives = 54/59 (91.53%), Query Frame = 1 Query: 1 QVVENFDSMGLKDELLRGVYAYGFERPSAVQQRAVKPITSGRDVIAQSQSGTGKTAVFS 177 +VV FD MGL++ELLRG+YAYGFERPSA+QQRA+KPI GRDVIAQSQSGTGKTAVFS Sbjct: 87 EVVHTFDEMGLREELLRGIYAYGFERPSAIQQRAIKPIIMGRDVIAQSQSGTGKTAVFS 145
BLAST of mRNA_H-paniculata_contig15423.3179.1 vs. uniprot
Match: A0A7R9AFM3_9CRUS (RNA helicase (Fragment) n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R9AFM3_9CRUS) HSP 1 Score: 97.8 bits (242), Expect = 1.670e-24 Identity = 43/59 (72.88%), Postives = 54/59 (91.53%), Query Frame = 1 Query: 1 QVVENFDSMGLKDELLRGVYAYGFERPSAVQQRAVKPITSGRDVIAQSQSGTGKTAVFS 177 +V+ FDSMGL+++LLRG+YAYGFERPSA+QQR++KP+ GRDVIAQ+QSGTGKTA FS Sbjct: 26 EVIPTFDSMGLREDLLRGIYAYGFERPSAIQQRSIKPVMKGRDVIAQAQSGTGKTATFS 84
BLAST of mRNA_H-paniculata_contig15423.3179.1 vs. uniprot
Match: A0A7S1U889_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U889_9STRA) HSP 1 Score: 100 bits (250), Expect = 2.580e-24 Identity = 46/58 (79.31%), Postives = 55/58 (94.83%), Query Frame = 1 Query: 1 QVVENFDSMGLKDELLRGVYAYGFERPSAVQQRAVKPITSGRDVIAQSQSGTGKTAVF 174 +V + FD MGLK++LLRG+Y+YGFERPSA+QQRA+KPIT+GRDVIAQSQSGTGKTAVF Sbjct: 84 RVCKTFDDMGLKEDLLRGIYSYGFERPSAIQQRAIKPITAGRDVIAQSQSGTGKTAVF 141
BLAST of mRNA_H-paniculata_contig15423.3179.1 vs. uniprot
Match: A0A7S0E1J2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E1J2_9EUKA) HSP 1 Score: 97.1 bits (240), Expect = 3.100e-24 Identity = 44/59 (74.58%), Postives = 53/59 (89.83%), Query Frame = 1 Query: 1 QVVENFDSMGLKDELLRGVYAYGFERPSAVQQRAVKPITSGRDVIAQSQSGTGKTAVFS 177 ++V +FDSMGLKDELLRG++AYGFE+PSA+QQRAV PI GRD IAQ+QSGTGKT +FS Sbjct: 22 EIVPSFDSMGLKDELLRGIFAYGFEKPSAIQQRAVMPILKGRDTIAQAQSGTGKTTIFS 80
BLAST of mRNA_H-paniculata_contig15423.3179.1 vs. uniprot
Match: A0A7R9CJ77_TIMCR (RNA helicase n=1 Tax=Timema cristinae TaxID=61476 RepID=A0A7R9CJ77_TIMCR) HSP 1 Score: 98.6 bits (244), Expect = 3.310e-24 Identity = 44/59 (74.58%), Postives = 54/59 (91.53%), Query Frame = 1 Query: 1 QVVENFDSMGLKDELLRGVYAYGFERPSAVQQRAVKPITSGRDVIAQSQSGTGKTAVFS 177 +V+ FDSMGL++ELLRG+YAYGFE+PSA+QQR++KPI GRDVIAQ+QSGTGKTA FS Sbjct: 27 EVIPTFDSMGLREELLRGIYAYGFEKPSAIQQRSIKPIVKGRDVIAQAQSGTGKTATFS 85
BLAST of mRNA_H-paniculata_contig15423.3179.1 vs. uniprot
Match: A0A210PMW1_MIZYE (RNA helicase n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210PMW1_MIZYE) HSP 1 Score: 97.8 bits (242), Expect = 4.690e-24 Identity = 45/59 (76.27%), Postives = 53/59 (89.83%), Query Frame = 1 Query: 1 QVVENFDSMGLKDELLRGVYAYGFERPSAVQQRAVKPITSGRDVIAQSQSGTGKTAVFS 177 +V FD+MGL++ELLRGVYAYGFE+PSA+QQRA+KPI GRDVIAQ+QSGTGKTA FS Sbjct: 27 EVTPTFDNMGLREELLRGVYAYGFEKPSAIQQRAIKPIVKGRDVIAQAQSGTGKTATFS 85
BLAST of mRNA_H-paniculata_contig15423.3179.1 vs. uniprot
Match: UPI001443481E (eukaryotic initiation factor 4A-III isoform X1 n=1 Tax=Megalopta genalis TaxID=115081 RepID=UPI001443481E) HSP 1 Score: 99.8 bits (247), Expect = 7.000e-24 Identity = 45/59 (76.27%), Postives = 54/59 (91.53%), Query Frame = 1 Query: 1 QVVENFDSMGLKDELLRGVYAYGFERPSAVQQRAVKPITSGRDVIAQSQSGTGKTAVFS 177 +V+ FD+MGLKDELLRG+YAYGFE+PSA+QQR++KPI GRDVIAQ+QSGTGKTA FS Sbjct: 27 EVIPTFDNMGLKDELLRGIYAYGFEKPSAIQQRSIKPIMKGRDVIAQAQSGTGKTATFS 85
BLAST of mRNA_H-paniculata_contig15423.3179.1 vs. uniprot
Match: A0A4P9Y678_9FUNG (ATP-dependent RNA helicase eIF4A (Fragment) n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9Y678_9FUNG) HSP 1 Score: 99.8 bits (247), Expect = 9.400e-24 Identity = 45/59 (76.27%), Postives = 53/59 (89.83%), Query Frame = 1 Query: 1 QVVENFDSMGLKDELLRGVYAYGFERPSAVQQRAVKPITSGRDVIAQSQSGTGKTAVFS 177 QV++NFD+M LKDELLRG+YAYGFERPSA+QQRA+ P+ G DVIAQ+QSGTGKTA FS Sbjct: 44 QVIDNFDNMDLKDELLRGIYAYGFERPSAIQQRAIMPVVQGNDVIAQAQSGTGKTATFS 102 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15423.3179.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15423.3179.1 >prot_H-paniculata_contig15423.3179.1 ID=prot_H-paniculata_contig15423.3179.1|Name=mRNA_H-paniculata_contig15423.3179.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=51bp MGLKDELLRGVYAYGFERPSAVQQRAVKPITSGRDVIAQSQSGTGKTAVFback to top mRNA from alignment at H-paniculata_contig15423:2470..3414+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15423.3179.1 ID=mRNA_H-paniculata_contig15423.3179.1|Name=mRNA_H-paniculata_contig15423.3179.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=945bp|location=Sequence derived from alignment at H-paniculata_contig15423:2470..3414+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15423:2470..3414+ >mRNA_H-paniculata_contig15423.3179.1 ID=mRNA_H-paniculata_contig15423.3179.1|Name=mRNA_H-paniculata_contig15423.3179.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=306bp|location=Sequence derived from alignment at H-paniculata_contig15423:2470..3414+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |