mRNA_H-paniculata_contig15403.3172.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig15403.3172.1 vs. uniprot
Match: D7FM37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM37_ECTSI) HSP 1 Score: 568 bits (1464), Expect = 1.200e-193 Identity = 318/623 (51.04%), Postives = 401/623 (64.37%), Query Frame = 1
Query: 1 YKRPVQWSLSDFVGKYHLSRMSTDNPVPGTAMRVEKERKMFVEERASALNDVVNKIEVRRALRVTSRTRKAAITSRVGFQATVGYKIDSVERMYQNATSAKKQRVAASRYIPDYQFRTFLSHVESNNVYQVKSRLRSNEAFRLIATAEERYGNTPLHRAVSLGFVEMTRMLLEAGANVDKLNNMGDAPIHYCWRFWRSDTSRYFLWRKDPFLVVTAQQRRDFEAMKKDVSTTVELLRMLTRGGADVDLAKNNGEVALHTAARRGPLQAVWVLLFSKAVHDVVDHRMFTPESIAARTGNKDIVALLANWPTVRLKYFDSEFVHEWMHFLGDPDANLEQKSTAAEIVGLVRMEAQEENTAVRARGGHTLIDEIVTGPVMSAKDRAQSHFTD-SSSDVVSLTSTLESSSAAANNMNLPGVIGGGDEKVHNVEHEDREYAAEGGNKQSP-------------RKTKSKIGGEIDVFLAQARDENGGIVIGAAGPGEVTPFSRLSTKTNLEGRKSRWLARRNNGGKISNTGSAI-----DPFGRPMTTSQRRRVAALEVAEDGDVEGPLLRPATSSILLTSRSRPAKKATVPHPLYGRRLLTRKVLEQREREASIKPTATICVGGDLD 1812
++R QW ++DF+GK+HLSRM+T N +PGTA RVE+ER F+E+RAS+L ++ IE RR LRV SR R R S ++RL+ATAEE+YGNTPLHRAVSLGFVE+ +LLEAGA++D +N MGDAPIH CWRFW+ D+ +Y LWRK+P+L+ T + + DF M++D+ +TV LLR+LTRGGADVD +NNGEVALHTAARRGP A+W+LL S+A HD++DHR FTPE+ A R GN+D LLA WP RLKY +SEFV EWM FL DPDANL TA E++ VRME EE+TAV ARGGH L+DEI+TGPV+SA+ RA++ + S+SD V++ STLE+S+ N+ G E + EGG ++ +KTKSK+G EIDV+LAQARDE G+ +G G+ T +SRL K LEGR++RW R+NG K TG A DPFGRPMTTSQRRRVAALE+AEDG +E PL+R ATSS LLT+RSR KK + PHP YGRRLLT+++L QREREASIKPTATI + LD
Sbjct: 11 HRRDAQWGVTDFIGKFHLSRMTTPNTIPGTATRVEQERNTFLEKRASSLQKTLDNIEARRRLRVRSRLR---------------------------------------------------------------DRSSSGSSYRLVATAEEKYGNTPLHRAVSLGFVEICSVLLEAGADLDAVNTMGDAPIHCCWRFWKGDSCKYGLWRKNPYLMTTKKMKEDFARMERDIQSTVSLLRLLTRGGADVDAQRNNGEVALHTAARRGPFMALWILLLSQATHDIIDHRHFTPETAAIRAGNEDAKTLLATWPVARLKYRNSEFVQEWMKFLTDPDANLTTDLTAKEVLAQVRMEEHEESTAVHARGGHLLVDEIITGPVLSAEQRARAKILNFSASDAVTIASTLENSTNNTNSAKSCSGSNCGPSPSGTRESD------EGGRRRXXXXXXXXXXXXXRQQKTKSKLGKEIDVYLAQARDEAAGVRVGGL-TGQSTAYSRLVAKEQLEGRRNRWPGIRDNG-KDPPTGGAGSGCSGDPFGRPMTTSQRRRVAALEIAEDGGIESPLIRAATSSALLTTRSRAMKKESTPHPFYGRRLLTQRLLNQREREASIKPTATIGMNKGLD 562
BLAST of mRNA_H-paniculata_contig15403.3172.1 vs. uniprot
Match: A0A6H5L2K7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2K7_9PHAE) HSP 1 Score: 563 bits (1452), Expect = 2.810e-193 Identity = 306/534 (57.30%), Postives = 383/534 (71.72%), Query Frame = 1
Query: 277 MYQNATSAKKQRVAASRYIPDYQFRTFLSHVESNNVYQVKSRLR----SNEAFRLIATAEERYGNTPLHRAVSLGFVEMTRMLLEAGANVDKLNNMGDAPIHYCWRFWRSDTSRYFLWRKDPFLVVTAQQRRDFEAMKKDVSTTVELLRMLTRGGADVDLAKNNGEVALHTAARRGPLQAVWVLLFSKAVHDVVDHRMFTPESIAARTGNKDIVALLANWPTVRLKYFDSEFVHEWMHFLGDPDANLEQKSTAAEIVGLVRMEAQEENTAVRARGGHTLIDEIVTGPVMSAKDRAQSHFTD-SSSDVVSLTSTLESSSAAANNMNLPGVIGGGD-----------EKVHNVEHEDREYAAEGGNK-QSPRKTKSKIGGEIDVFLAQARDENGGIVIGAAGPGEVTPFSRLSTKTNLEGRKSRWLARRNNGGKISNTGSAI-----DPFGRPMTTSQRRRVAALEVAEDGDVEGPLLRPATSSILLTSRSRPAKKATVPHPLYGRRLLTRKVLEQREREASIKPTATICVGGDLD 1812
MYQ+A K++++ ++Y PD F L +VE+NNVYQV+SRLR + ++RL+ATAEE+YGNTPLHRAVSLGFVE+ +LLEAGA++D +N MGDAPIH CWRFW+ D+ +Y LWRK+P+L+ T + + DF M++D+ +TV LLR+LTRGGADVD +NNGEVALHTAARRGP A+W+LL S+A HD++DHR FTPE+ A R GN+D LLA WP RLKY +SEFV EWM FL DPDANL TA E++ VRME EE+TAVRARGGH L+DEI+TGPV+SA+ RA++ F + S+ D V++ STLE+S ANN N G + E E +GG+K Q +KTKSK+G EIDV+LAQARDE G+ +G G+ T +SRL K LEGR++RW R+NG K TG A DPFGRPMTTSQRRRVAALEVAEDG +E PL+R ATSS LLT+RSR KK + PHP YGRRLLT+++L QREREASIKPTATI + LD
Sbjct: 1 MYQSAAGTTKKQISIAKYAPDADFHALLKYVETNNVYQVRSRLRDRSSTGSSYRLVATAEEKYGNTPLHRAVSLGFVEICSVLLEAGADLDAVNTMGDAPIHCCWRFWKGDSCKYGLWRKNPYLMTTKKMKEDFARMERDMQSTVSLLRLLTRGGADVDAQRNNGEVALHTAARRGPFMALWILLLSQATHDIIDHRNFTPETAAIRAGNEDAKTLLATWPVARLKYRNSEFVQEWMKFLTDPDANLTTDLTAKEVLAQVRMEEHEESTAVRARGGHLLVDEIITGPVLSAEQRARAKFINFSAPDPVTVASTLENS---ANNTNSVKSCSGSNCGPSPSPSGTRESDEGGRRRGGEEGDKGGDKEQRQQKTKSKLGKEIDVYLAQARDEAAGMRVGGL-TGQSTAYSRLVAKEQLEGRRNRWPGIRDNG-KDPPTGGAGSGCSGDPFGRPMTTSQRRRVAALEVAEDGGIESPLIRAATSSALLTTRSRAMKKESTPHPFYGRRLLTQRLLNQREREASIKPTATIGMNKGLD 529
BLAST of mRNA_H-paniculata_contig15403.3172.1 vs. uniprot
Match: A0A7S1XPJ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XPJ0_9STRA) HSP 1 Score: 158 bits (399), Expect = 2.750e-37 Identity = 157/578 (27.16%), Postives = 246/578 (42.56%), Query Frame = 1
Query: 13 VQWSLSDFVGKYHLSRMSTDNPVPGTAMRVEKERKMFVEERASALNDVVNKIEVRRALRVTSRTRKAAITSRVGFQATVG--------YKIDSVERMYQNATSAKKQRVAASRYIPDYQFRTFLSHVESNNVYQVKSRLRSNEAFRLIATAEERYGNTPLHRAVSLGFVEMTRMLLEAGANVDKLNNMGDAPIHYCWRFWRSDTSRYFLWRKDPFLVVTAQQRRDFEAMKKDVSTTVELLRMLTRGGADVDLAKNNGEVALHTAARRGPLQAVWVLLFSKAVHDVVDHRMFTPESIAARTGNKDIVALLANWPTVRLKYFDSEFVHEWMHFLGDPDANLEQKSTAAEIVGLVRMEAQEENTAVRARGGHTLIDEIVTGPVMSAKDRAQSHFTDSSSDVVSLTSTLESSSAAANNMNLPGVIGGG--DEKVHNVEHEDREYAAEGGNKQSPRKTKSKIGGEIDVFLAQARDENGGIVIGAAGPGEVTPFSRLST-KTNLEGRKSRWLARRNNGGKISNTGSAI----------DPFG--RPMTTSQRRRV-AALEVAEDGDVEGPLLRPATSSILLTSR 1674
+++SL+DF G YH SR+++++ +PG + +++ K +ER L + I + R R+AA+ + VG Y D + + A +K+ + + + Q R F + V +N + ++ FR + + YG+T L GF+E +LL GA+ + ++ G+ PIH CW +W D +R EA + TV LLR+L + GAD D G ALH AA RGP AV VLL +A H + + P SIA N ++V LL +W + Y EF WMHF D D++L + + +R++ +++ R +D++VTG A D V+ +TL S+ + AN N D K H + E A+G + P TK + ID +L G + TPF + LE +K + + TG A+ D RPMT + RR+ +A+EVA DG VE + R A +S T+R
Sbjct: 24 IEYSLTDFHGTYHQSRIASEDTIPGINVARDRQLKEATKERQDRLAGRIQSIRNNFKAKTKKRDRRAAVEVKALIDGGVGDAAGRIQLYLNDKEDELLAKAEMEEKRSIGGA-FHRKVQTRDFFAFVHNNKPNHIDRLVK--RGFRGVDIQQPDYGHTGLFTTAKKGFIETMEVLLRHGADPEIPSDFGEYPIHKCWDWW-DDAARD-------------------EAAEAQGKRTVRLLRLLLQYGADPDAQDGQGNTALHFAALRGPNNAVKVLLEFRATHKIKNALHKYPMSIATANENWEVVRLLHHWSLIFASYRSEEFRLAWMHFCKDVDSSLISSKPSRLLANELRIKEEQKRLERTTREAFRTLDDVVTGGKQMANDN------------VATPATLFSTKSMANLFNRSAADDSRKRDRKAHRKKQE-----AQGPATRLP--TKDPLPVPIDAYLR-------GTI--------ATPFVETKDPRRELEAKKXXXXXXXKS--SMRGTGHAMVDAKVKLPAKDTLWEERPMTKNDARRLLSAVEVARDGSVEFKVKRSARASSAFTAR 542
BLAST of mRNA_H-paniculata_contig15403.3172.1 vs. uniprot
Match: A0A7S3JQF3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JQF3_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 3.190e-11 Identity = 63/217 (29.03%), Postives = 95/217 (43.78%), Query Frame = 1
Query: 457 NTPLHRAVSLGFVEMTRMLLEAGANVDKLNNMGDAPIHYCWRFWRSDTSRYFLWRKDPFLVVTAQQRRDFEAMKKDVSTTVELLRMLTRGGADVDLAKNNGEVALHTAARRGPLQAVWVLLFSKAVHDVVDHRMFTPESIA-----------ARTGNK------------------------------DIVALLANWPTVRLKYFDSEFVHEWMHFL 984
N PLH AV G+VEM +LL+ GA+ + N +GD PI W FW ++ ++D Q +A+ + ++T+ +L+ L GA + +++ ALH AARRGP+QAV +LL A H D +P IA A+ N+ +I LL NW T+R + EF +W +L
Sbjct: 135 NNPLHLAVRFGYVEMVEILLKYGADPNAENGLGDCPILLAWLFWNPAHAQ----QRDNL----RQPEIQAQALNNE-NSTLRILKALLEHGARPNSPRSDMSTALHEAARRGPVQAVQLLLKYGADHLQCDTTDQSPIDIAFDALKRQRINIAKIQNQQDDQVDIDFFTMNNKKFAIQLAQEKALNLQEIFCLLQNWTTIREEKRHDEFFRQWQKWL 342
BLAST of mRNA_H-paniculata_contig15403.3172.1 vs. uniprot
Match: UPI000D733D72 (E3 ubiquitin-protein ligase MIB2-like isoform X1 n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D733D72) HSP 1 Score: 58.2 bits (139), Expect = 3.490e-5 Identity = 51/210 (24.29%), Postives = 81/210 (38.57%), Query Frame = 1
Query: 313 VAASRYIPDYQFRTFLSHVESNNVYQVKSRLRSNEAFRLIATAEERYGNTPLHRAVSLGFVEMTRMLLEAGANVDKLNNMGDAPIHYCWRFWRSDTSRYFLWRKDPFLVVTAQQRRDFEAMKKDVSTTVELLRMLTRGGADVDLAKNNGEVALHTAARRGPLQAVWVLLFSKAVHDVVDHRMFTPESIAARTGNKDIVALLANWPTVRLK 942
+AA R D F + L+ N + +AT E+ G TPLH A + G + +TR L+ AGAN++K++ GD P+ M + +E+ L + G DV +A G+ A H AA RG + ++L A + D TP A ++ +WP V ++
Sbjct: 122 MAAQRVTEDVHVLVFFKAIAQREEIPALEMLKKNPS---LAT-EQAQGLTPLHLATNRGLLSITRALIAAGANINKIDKDGDTPL--------------------------------IAGM-----SNIEVAEFLVKEGCDVTIANEKGQTAGHMAAMRGYSSLLKLMLSRGADFNAQDVAGDTPLHDAILKKETSAAEVIISWPKVDIR 290
BLAST of mRNA_H-paniculata_contig15403.3172.1 vs. uniprot
Match: A0A2T7PQC1_POMCA (RING-type E3 ubiquitin transferase n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7PQC1_POMCA) HSP 1 Score: 58.2 bits (139), Expect = 4.970e-5 Identity = 51/210 (24.29%), Postives = 81/210 (38.57%), Query Frame = 1
Query: 313 VAASRYIPDYQFRTFLSHVESNNVYQVKSRLRSNEAFRLIATAEERYGNTPLHRAVSLGFVEMTRMLLEAGANVDKLNNMGDAPIHYCWRFWRSDTSRYFLWRKDPFLVVTAQQRRDFEAMKKDVSTTVELLRMLTRGGADVDLAKNNGEVALHTAARRGPLQAVWVLLFSKAVHDVVDHRMFTPESIAARTGNKDIVALLANWPTVRLK 942
+AA R D F + L+ N + +AT E+ G TPLH A + G + +TR L+ AGAN++K++ GD P+ M + +E+ L + G DV +A G+ A H AA RG + ++L A + D TP A ++ +WP V ++
Sbjct: 1104 MAAQRVTEDVHVLVFFKAIAQREEIPALEMLKKNPS---LAT-EQAQGLTPLHLATNRGLLSITRALIAAGANINKIDKDGDTPL--------------------------------IAGM-----SNIEVAEFLVKEGCDVTIANEKGQTAGHMAAMRGYSSLLKLMLSRGADFNAQDVAGDTPLHDAILKKETSAAEVIISWPKVDIR 1272
BLAST of mRNA_H-paniculata_contig15403.3172.1 vs. uniprot
Match: A0A5J4YJV7_PORPP (Putative ankyrin repeat protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YJV7_PORPP) HSP 1 Score: 56.6 bits (135), Expect = 5.870e-5 Identity = 40/120 (33.33%), Postives = 60/120 (50.00%), Query Frame = 1
Query: 460 TPLHRAVSLGFVEMTRMLLEAGANVDKLNNMGDAPIHYCWRFWRSDTSRYFLWRKDPFLVVTAQQRRDFEAMKKDVSTTVELLRMLTRGGADVDLAKNNGEVALHTAARRGPLQAVWVLL 819
+PL A S G+V++ ++LL+AGAN ++ N G I YC F +R + F V +Q M K ++ + ++L GAD + GE LH AAR+G L V +LL
Sbjct: 93 SPLQWAASEGYVDIAKLLLDAGANTNQKNASGRTAIMYC--FENLPPARAGIAPPAGFPGVAGKQAPQQVPMVKRMTGHAGVAKLLLVSGADKSVVNEVGENLLHLAARKGQLGLVELLL 210
BLAST of mRNA_H-paniculata_contig15403.3172.1 vs. uniprot
Match: A0A6G0XKC4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XKC4_9STRA) HSP 1 Score: 54.3 bits (129), Expect = 6.820e-5 Identity = 40/141 (28.37%), Postives = 65/141 (46.10%), Query Frame = 1
Query: 430 IATAEERYGNTPLHRAVSLGFVEMTRMLLEAGANVDKLNNMGDAPIH---YCWRFWRSDTSRYFLWRKDPFLVVTAQQRRDFEAMKKDVSTT---------VELLRMLTRGGADVDLAKNNGEVALHTAARRGPLQAVWVL 816
+ A+ ++GNTPLH A G E R+LL+A A VD++NN P+H YC D +R + Q + D AM K+ +T + + +L + GAD ++ A +A +R ++A +L
Sbjct: 31 MVNAKNQFGNTPLHAAAMAGCAETVRVLLDADAVVDEVNNQLSTPLHHACYC----TQDNTRV--------VDTLIQAKADVNAMDKNKATPLIVAAKKNQIGAIELLLKAGADPAAKDDSNRNAYASAKQRNNIKAAALL 159
BLAST of mRNA_H-paniculata_contig15403.3172.1 vs. uniprot
Match: A0A7C8IF25_9PLEO (Ankyrin repeat-containing domain protein n=1 Tax=Massariosphaeria phaeospora TaxID=100035 RepID=A0A7C8IF25_9PLEO) HSP 1 Score: 56.6 bits (135), Expect = 8.320e-5 Identity = 47/149 (31.54%), Postives = 63/149 (42.28%), Query Frame = 1
Query: 436 TAEERYGNTPLHRAVSLGFVEMTRMLLEAGANVDKLNNMGDAPIHYCWRFWRSDTSRYFLWRKDPFLVVTAQQRRDFEAMKKDVSTTVELLRMLTRGGADVDLAKNNGEVALHTAARRGPLQAVWVLLFSKAVHDVVDHRMFTPESIAA 882
+AE GNT LH AVS G V +T +LLEAGA+ + N G + + + T Q VE +R L + GAD +LA + EV LH A L+ +LL S A D + + TP AA
Sbjct: 23 SAETSLGNTALHLAVSKGLVNITTILLEAGADPNYANIRGATALRHAVDY-------------------TTPQIYSSLTPPSSYEDVVECIRTLFKFGADPNLADTSDEVPLHLAVESDRLEIPRLLLKSNAHVDALGGKKRTPLHYAA 152 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15403.3172.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15403.3172.1 >prot_H-paniculata_contig15403.3172.1 ID=prot_H-paniculata_contig15403.3172.1|Name=mRNA_H-paniculata_contig15403.3172.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=604bp YKRPVQWSLSDFVGKYHLSRMSTDNPVPGTAMRVEKERKMFVEERASALNback to top mRNA from alignment at H-paniculata_contig15403:2458..5991+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15403.3172.1 ID=mRNA_H-paniculata_contig15403.3172.1|Name=mRNA_H-paniculata_contig15403.3172.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3534bp|location=Sequence derived from alignment at H-paniculata_contig15403:2458..5991+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15403:2458..5991+ >mRNA_H-paniculata_contig15403.3172.1 ID=mRNA_H-paniculata_contig15403.3172.1|Name=mRNA_H-paniculata_contig15403.3172.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3624bp|location=Sequence derived from alignment at H-paniculata_contig15403:2458..5991+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |