mRNA_H-paniculata_contig15402.3171.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig15402.3171.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 110 bits (274), Expect = 9.720e-26 Identity = 55/94 (58.51%), Postives = 61/94 (64.89%), Query Frame = 1 Query: 1 YQEWNKDSFLPALKEKMPGLEGEEVVAQQDGATPHTGIDTPWKLNELGRDGGWNVNLVAQPVQSPDLNINGLGFFDSLKSRVWRERYGAIDGLV 282 Y++W D LPA+KEKMP L + VV QQDGA+PHTG P LN G GW V LV QP QSPDLNIN LG F SLK RVW +ID LV Sbjct: 271 YKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSIDELV 364
BLAST of mRNA_H-paniculata_contig15402.3171.1 vs. uniprot
Match: UPI000B778AD2 (uncharacterized protein LOC110722901 n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B778AD2) HSP 1 Score: 98.6 bits (244), Expect = 2.550e-22 Identity = 51/151 (33.77%), Postives = 84/151 (55.63%), Query Frame = 1 Query: 19 DSFLPALKEKMPGLEGEEVVAQQDGATPHTGIDTPWKLNELGRDGGWNVNLVAQPVQSPDLNINGLGFFDSLKSRVWRERYGAIDGLVEGVKSTYDAYDEAILERVWQSLFKRYSQVLNVLGGNDFEVQHTKTKERQRVGSRSKSVKIDRE 471 + +PA++ P + + QQD A PH ID P L E +D G++++L+ QP QSPDLN+ LGFF ++++ +E +++ LVE V ++Y +YD I+ W +++ V GGN+F+ H K QR+G V++ E Sbjct: 63 EEVMPAIRATWPENSCKTIWIQQDNARPHINIDDPEFLEEANKD-GFDMHLICQPAQSPDLNVLDLGFFRAIQAIQHQEFPESVEELVESVLTSYASYDPRIINMTWLHSMYVMEEIMKVKGGNNFKNPHKGKKRLQRLGLLPSYVEVSNE 212
BLAST of mRNA_H-paniculata_contig15402.3171.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 1.600e-20 Identity = 46/138 (33.33%), Postives = 77/138 (55.80%), Query Frame = 1 Query: 1 YQEWNKDSFLPALKEKMPGLEGEEVVAQQDGATPHTGIDTPWKLNELGRDGGWNVNLVAQPVQSPDLNINGLGFFDSLKSRVWRERYGAIDGLVEGVKSTYDAYDEAILERVWQSLFKRYSQVLNVLGGNDFEVQHTK 414 Y+ + D +PA++ + PG G + QQD A PH +D P L GR GWN+ L+AQP QSPD N+ LGFF++++S + ID L++ V+ ++ +L++ + +L K + + G N +++ H K Sbjct: 266 YRRFLVDKVIPAIQAQWPGRRGATIYVQQDNAKPHVAVDDPEVL-AAGRKEGWNIQLMAQPAQSPDFNVLDLGFFNAIQSLQHQTTARTIDDLIKCVEDAFENLAWRVLDKTFMTLQKVMEEAMRSSGDNVYKLPHLK 402
BLAST of mRNA_H-paniculata_contig15402.3171.1 vs. uniprot
Match: UPI001F5D24F1 (uncharacterized protein LOC124671868 n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5D24F1) HSP 1 Score: 97.1 bits (240), Expect = 1.610e-20 Identity = 57/162 (35.19%), Postives = 85/162 (52.47%), Query Frame = 1 Query: 4 QEWNKDSFLPALKEKMPGLE-GEEVVAQQDGATPHTGIDTPWKLNELGRDGGWNVNLVAQPVQSPDLNINGLGFFDSLKSRVWRERYGAIDGLVEGVKSTYDAYDEAILERVWQSLFKRYSQVLNVLGGNDFEVQHTKTKERQRVGSRSKSVKIDREAFDAA 486 +EW + LPA+K K P E G+ + QQD A H +D P D GW++ L+ QP SPDLNI LGFF +L+S + G++D +V V Y+ Y R++ +L ++LN+ G N ++V H + QR+G ++ DR DAA Sbjct: 296 REWLVNKVLPAIKAKWPASERGQTIYIQQDNARTHIPVDDPVFCAAAQAD-GWDIRLICQPPNSPDLNILDLGFFAALQSLFHKLFPGSLDEIVLKVFQAYEQYPTERTNRIFLTLQSCMREILNLKGSNHYKVPHMRKLALQRLGILPVRLQCDRIIVDAA 456
BLAST of mRNA_H-paniculata_contig15402.3171.1 vs. uniprot
Match: J3S7K7_BETVV (Mariner transposase n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=J3S7K7_BETVV) HSP 1 Score: 97.1 bits (240), Expect = 1.980e-20 Identity = 53/157 (33.76%), Postives = 84/157 (53.50%), Query Frame = 1 Query: 19 DSFLPALKEKMPGLEGEEVVAQQDGATPHTGIDTPWKLNELGRDGGWNVNLVAQPVQSPDLNINGLGFFDSLKSRVWRERYGAIDGLVEGVKSTYDAYDEAILERVWQSLFKRYSQVLNVLGGNDFEVQHTKTKERQRVGSRSKSVKIDREAFDAAV 489 + LPA++ K P +E+ QQD A PH + L E R+GG+ +N++ QP QSPDLNI LGFF +++S + +D L++ V+ Y Y+ I+ W L ++L V GGN+++ H K+ R+G +V+I E + V Sbjct: 338 NKLLPAIRAKWPENGCKEIWIQQDNARPHIQPNDAEFL-EACREGGFEINIICQPAQSPDLNILDLGFFKAIQSIQHQSFPKTVDELIKSVEDAYTVYEPRIINYTWIHLMYVMVEILKVKGGNNYKNPHNSKKKMDRLGLLPTTVEISEELVNDTV 493
BLAST of mRNA_H-paniculata_contig15402.3171.1 vs. uniprot
Match: UPI00053F2A94 (uncharacterized protein LOC104896197 n=3 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F2A94) HSP 1 Score: 96.3 bits (238), Expect = 3.490e-20 Identity = 52/159 (32.70%), Postives = 87/159 (54.72%), Query Frame = 1 Query: 22 SFLPALKEKMPGLEGEEVVAQQDGATPHT-GIDTPWKLNELGRDGGWNVNLVAQPVQSPDLNINGLGFFDSLKSRVWRERYGAIDGLVEGVKSTYDAYDEAILERVWQSLFKRYSQVLNVLGGNDFEVQHTKTKERQRVGSRSKSVKIDREAFDAAVEW 495 + LP++ K P +++ QQD A PH G D +K G+N+ L+ QP QSPDLN+ LGFF ++++ +++ ID L+ V+ YD +D ++++ W L ++L V GGN+++ H +R+G K+VK D+ D AV + Sbjct: 317 NVLPSIMSKWPAGMSKDICIQQDNARPHIQGNDEAFKA--AATQNGFNIMLIQQPPQSPDLNVLDLGFFRAIQALMYQTFPKNIDELITNVQDAYDRFDPSVMKYTWLQLQWIMVEILQVRGGNNYKNPHHGKARLERLGLLPKTVKCDQVIVDEAVHY 473
BLAST of mRNA_H-paniculata_contig15402.3171.1 vs. uniprot
Match: UPI00053F7236 (uncharacterized protein LOC104908485 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F7236) HSP 1 Score: 92.8 bits (229), Expect = 7.760e-20 Identity = 52/157 (33.12%), Postives = 85/157 (54.14%), Query Frame = 1 Query: 28 LPALKEKMPGLEGEEVVAQQDGATPHT-GIDTPWKLNELGRDGGWNVNLVAQPVQSPDLNINGLGFFDSLKSRVWRERYGAIDGLVEGVKSTYDAYDEAILERVWQSLFKRYSQVLNVLGGNDFEVQHTKTKERQRVGSRSKSVKIDREAFDAAVEW 495 PA+ K P +E+ QQD A H G D +K G+N+ L+ QP QSPDLN+ LGFF ++++ +++ ID L+E V+ YD +D +++ W L ++L V GGN+++ H +R+G K+V+ D + D AV++ Sbjct: 111 FPAIMSKWPAGLSKEIFIQQDNARAHIQGNDEAFKA--AATQNGFNIKLIQQPAQSPDLNVLDLGFFRAIQALMYQTFPKNIDELIENVQDAYDKFDPNVVKYTWLKLHWVMVEILKVKGGNNYKNPHHGKARLERLGLLPKNVQFD-QIVDEAVQY 264
BLAST of mRNA_H-paniculata_contig15402.3171.1 vs. uniprot
Match: UPI000B8A8B59 (uncharacterized protein LOC110790786 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8A8B59) HSP 1 Score: 94.0 bits (232), Expect = 1.990e-19 Identity = 52/159 (32.70%), Postives = 83/159 (52.20%), Query Frame = 1 Query: 19 DSFLPALKEKMPGLEGEEVVAQQDGATPHTGIDTPWKLNELGRDGGWNVNLVAQPVQSPDLNINGLGFFDSLKSRVWRERYGAIDGLVEGVKSTYDAYDEAILERVWQSLFKRYSQVLNVLGGNDFEVQHTKTKERQRVGSRSKSVKIDREAFDAAVEW 495 D P ++ K P + + QQD A PH +D P L E +D G++++L+ QP QSPDLNI L FF +++S +E +++ L+E V +Y+ YD I+ W ++L V GGN+++ H K QR+G V++ E V + Sbjct: 283 DEVKPTIRAKWPRGACKTIWIQQDNARPHIEVDDPQFLEEAKKD-GFDMHLICQPPQSPDLNILDLSFFRAIQSIQHQEFPVSVEELIESVIKSYNNYDPNIINMTWLHSMYVMEEILKVKGGNNYKSPHKGKKRLQRLGVLPTYVEVPNELVQDTVHF 440
BLAST of mRNA_H-paniculata_contig15402.3171.1 vs. uniprot
Match: UPI000B8AF499 (uncharacterized protein LOC110800263 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8AF499) HSP 1 Score: 92.0 bits (227), Expect = 2.600e-19 Identity = 48/159 (30.19%), Postives = 83/159 (52.20%), Query Frame = 1 Query: 19 DSFLPALKEKMPGLEGEEVVAQQDGATPHTGIDTPWKLNELGRDGGWNVNLVAQPVQSPDLNINGLGFFDSLKSRVWRERYGAIDGLVEGVKSTYDAYDEAILERVWQSLFKRYSQVLNVLGGNDFEVQHTKTKERQRVGSRSKSVKIDREAFDAAVEW 495 + LPA+K K P +++ QQD A PH + L +D G+N+ LV QP QSPD+NI LGFF +++S ++ ++ L+E V++ Y A D + W L ++L V GGN+++ H K+ +R+G +++ + + + Sbjct: 125 EDLLPAIKSKWPSNACKDIWIQQDNARPHISPNDREFLEAATQD-GFNIRLVNQPAQSPDMNILDLGFFRAIQSIQYKSFPDSVTSLIEAVENAYIALDSKAMNFTWMHLKYCMIEILQVQGGNNYKNPHKGKKKLERLGLLPTEIEVSEKLLEETTNY 282
BLAST of mRNA_H-paniculata_contig15402.3171.1 vs. uniprot
Match: UPI00053F8527 (uncharacterized protein LOC104897330 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F8527) HSP 1 Score: 93.6 bits (231), Expect = 3.380e-19 Identity = 48/159 (30.19%), Postives = 84/159 (52.83%), Query Frame = 1 Query: 19 DSFLPALKEKMPGLEGEEVVAQQDGATPHTGIDTPWKLNELGRDGGWNVNLVAQPVQSPDLNINGLGFFDSLKSRVWRERYGAIDGLVEGVKSTYDAYDEAILERVWQSLFKRYSQVLNVLGGNDFEVQHTKTKERQRVGSRSKSVKIDREAFDAAVEW 495 ++ +PA+ P +E+ QQD A PH P + G+N+ L+ QP QSPDLN+ LGFF ++++ ++ +D L+ V+ YD +D +L+ W L ++L GGN+F+ H ++ +R+G ++V +D+ D AV + Sbjct: 348 NTIIPAIMRNWPEGVSKEIYIQQDNARPHIHASDP-QFIAAATQNGFNIQLINQPAQSPDLNVLDLGFFRAIQALQYQSFPKNLDELILRVQDCYDFFDPEVLKYTWLQLQYVMVEILKCKGGNNFKNPHHAKRKLERLGLLPENVTVDQAVIDEAVTY 505 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15402.3171.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15402.3171.1 >prot_H-paniculata_contig15402.3171.1 ID=prot_H-paniculata_contig15402.3171.1|Name=mRNA_H-paniculata_contig15402.3171.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=165bp YQEWNKDSFLPALKEKMPGLEGEEVVAQQDGATPHTGIDTPWKLNELGRDback to top mRNA from alignment at H-paniculata_contig15402:1922..2416+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15402.3171.1 ID=mRNA_H-paniculata_contig15402.3171.1|Name=mRNA_H-paniculata_contig15402.3171.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=495bp|location=Sequence derived from alignment at H-paniculata_contig15402:1922..2416+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15402:1922..2416+ >mRNA_H-paniculata_contig15402.3171.1 ID=mRNA_H-paniculata_contig15402.3171.1|Name=mRNA_H-paniculata_contig15402.3171.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=990bp|location=Sequence derived from alignment at H-paniculata_contig15402:1922..2416+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |