mRNA_H-paniculata_contig15383.3161.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig15383.3161.1 vs. uniprot
Match: A0A6H5JT32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT32_9PHAE) HSP 1 Score: 215 bits (548), Expect = 1.540e-66 Identity = 98/137 (71.53%), Postives = 113/137 (82.48%), Query Frame = 1 Query: 1 WKNKAFRQMTFGLYCPPYAFCEQAKPGAVQAVHEPGGWELLQQIETILGSYTAVGILEEWDLTMELFNAKVKSPVKDWREQNVSNSGKESEIRDHLLSWAHKSPEIHRAMATDMLLYDYAVSIFKEQTKETLGKVWD 411 WKNKAFRQMTFGLYCPP AFCEQA+PGA QAVHEPGGW LL+QIE IL +YTAVGILE WDL+M+LFNA+V SPV DW + SN G+ S +RD + WAH SPEIHR MATDMLLYDY+VS+FK QT +LG +W+ Sbjct: 254 WKNKAFRQMTFGLYCPPNAFCEQAEPGAQQAVHEPGGWILLEQIEAILATYTAVGILEYWDLSMQLFNARVTSPVWDWEDMEHSNRGQRSGLRDEVHRWAHMSPEIHRVMATDMLLYDYSVSVFKLQTSASLGTIWE 390
BLAST of mRNA_H-paniculata_contig15383.3161.1 vs. uniprot
Match: D7FUF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF7_ECTSI) HSP 1 Score: 172 bits (435), Expect = 1.030e-52 Identity = 77/136 (56.62%), Postives = 98/136 (72.06%), Query Frame = 1 Query: 1 WKNKAFRQMTFGLYCPPYAFCEQAKPGAVQAVHEPGGWELLQQIETILGSYTAVGILEEWDLTMELFNAKVKSPVKDWREQNVSNSGKESEIRDHLLSWAHKSPEIHRAMATDMLLYDYAVSIFKEQTKETLGKVW 408 W+N AF+QMT+GLYCPP A C + + A Q V EPGG +LLQQ+E IL Y AVGI+E W L+MELFNA+V+SPV++W N G S +RD +L WAH++P IHR + DMLLY +A+SIFK+QT E LG W Sbjct: 2 WQNLAFKQMTYGLYCPPEAICGEMQLDAPQMVDEPGGLDLLQQVEDILAGYAAVGIMEHWGLSMELFNARVRSPVREWNRFKQKNPGVTSGLRDQVLQWAHENPAIHRVLGADMLLYSFALSIFKQQTAEALGTNW 137
BLAST of mRNA_H-paniculata_contig15383.3161.1 vs. uniprot
Match: A0A6H5K0M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0M4_9PHAE) HSP 1 Score: 173 bits (439), Expect = 9.380e-52 Identity = 75/136 (55.15%), Postives = 102/136 (75.00%), Query Frame = 1 Query: 1 WKNKAFRQMTFGLYCPPYAFCEQAKPGAVQAVHEPGGWELLQQIETILGSYTAVGILEEWDLTMELFNAKVKSPVKDWREQNVSNSGKESEIRDHLLSWAHKSPEIHRAMATDMLLYDYAVSIFKEQTKETLGKVW 408 W+N+AF+QMTFGLYCPP FCE+A+ + Q + EPG ++LQQ++ IL YTAVGI+E WDL+++LFNA+V+SPV++W N G + +RD +L WAHKSP IHR + TDMLLY + +SIFK+QT +LG W Sbjct: 118 WRNQAFKQMTFGLYCPPDTFCEEAEVDSPQMLDEPGILDVLQQVQDILAGYTAVGIMEHWDLSIQLFNARVRSPVREWNVSKQRNPGVMTRLRDEVLQWAHKSPAIHRVIGTDMLLYSFGLSIFKQQTTASLGTNW 253
BLAST of mRNA_H-paniculata_contig15383.3161.1 vs. uniprot
Match: A0A6H5JT23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT23_9PHAE) HSP 1 Score: 171 bits (432), Expect = 4.990e-50 Identity = 77/136 (56.62%), Postives = 99/136 (72.79%), Query Frame = 1 Query: 1 WKNKAFRQMTFGLYCPPYAFCEQAKPGAVQAVHEPGGWELLQQIETILGSYTAVGILEEWDLTMELFNAKVKSPVKDWREQNVSNSGKESEIRDHLLSWAHKSPEIHRAMATDMLLYDYAVSIFKEQTKETLGKVW 408 WKN A++QMTFG+YCP CE + + EP G ++LQ++E IL YTAVGI+E WDL+M+LFNA+V+SPV+DW SN+G SE+RD +L WAH SP IHR MATD+LLY +A+SIFK QT E+LG W Sbjct: 170 WKNMAYKQMTFGMYCPHGLICEATEVETAPGLDEPHGLDVLQKVEDILSGYTAVGIMEHWDLSMQLFNARVRSPVRDWNMTVRSNAGLPSELRDEVLQWAHDSPVIHRLMATDLLLYSFALSIFKRQTTESLGTNW 305
BLAST of mRNA_H-paniculata_contig15383.3161.1 vs. uniprot
Match: D7G5K0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K0_ECTSI) HSP 1 Score: 172 bits (435), Expect = 1.930e-49 Identity = 76/136 (55.88%), Postives = 102/136 (75.00%), Query Frame = 1 Query: 1 WKNKAFRQMTFGLYCPPYAFCEQAKPGAVQAVHEPGGWELLQQIETILGSYTAVGILEEWDLTMELFNAKVKSPVKDWREQNVSNSGKESEIRDHLLSWAHKSPEIHRAMATDMLLYDYAVSIFKEQTKETLGKVW 408 W+NKAF+QMTFGLYCPP FC++A+ + Q + EPG ++LQQ++ L YTAVGI+E WDL+M+LFNA+V+SPV++W N G S +RD +L WAH+SP IHR + TDMLLY +A+SIFK+QT +LG W Sbjct: 273 WQNKAFKQMTFGLYCPPDTFCDEAEVESPQMLDEPGMLDILQQVQNTLAGYTAVGIMEHWDLSMQLFNARVRSPVREWNMFKQRNPGVMSGLRDEVLQWAHESPAIHRVIGTDMLLYYFALSIFKQQTTASLGTNW 408
BLAST of mRNA_H-paniculata_contig15383.3161.1 vs. uniprot
Match: A0A6H5L5I1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5I1_9PHAE) HSP 1 Score: 166 bits (421), Expect = 2.240e-48 Identity = 74/136 (54.41%), Postives = 97/136 (71.32%), Query Frame = 1 Query: 1 WKNKAFRQMTFGLYCPPYAFCEQAKPGAVQAVHEPGGWELLQQIETILGSYTAVGILEEWDLTMELFNAKVKSPVKDWREQNVSNSGKESEIRDHLLSWAHKSPEIHRAMATDMLLYDYAVSIFKEQTKETLGKVW 408 WKN A++QM FG+YCP CE + + EP G ++LQ++E IL YTAVGI+E WDL+M+LFNA+V+SPV++W SN+G SE+RD +L WAH SP +HR +ATDMLLY +A+SIFK QT E LG W Sbjct: 170 WKNMAYKQMAFGMYCPHGLICEATEVRTAPGLDEPHGLDVLQKVEDILSRYTAVGIMEHWDLSMQLFNARVRSPVREWNITQHSNAGLPSELRDEVLQWAHDSPVVHRLIATDMLLYSFALSIFKRQTTEALGTNW 305
BLAST of mRNA_H-paniculata_contig15383.3161.1 vs. uniprot
Match: A0A6H5JUF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUF0_9PHAE) HSP 1 Score: 160 bits (406), Expect = 4.200e-47 Identity = 77/158 (48.73%), Postives = 101/158 (63.92%), Query Frame = 1 Query: 1 WKNKAFRQMTFGLYCPPYAFCEQAKP----------------------GAVQAVHEPGGWELLQQIETILGSYTAVGILEEWDLTMELFNAKVKSPVKDWREQNVSNSGKESEIRDHLLSWAHKSPEIHRAMATDMLLYDYAVSIFKEQTKETLGKVW 408 W+N+AF+QMTFGLYCPP FCE A+ G Q + EPG ++LQQ++ IL YTAVGI+E WDL+M+LFNA+V+SPV++W N G + +RD +L WAHKSP IHR + TDMLLY + +SIFK+QT +LG W Sbjct: 69 WRNQAFKQMTFGLYCPPDTFCEVAEVNNVSQCETFVVGVGSLDGLREVGPPQMLDEPGILDVLQQVQDILAGYTAVGIMEHWDLSMQLFNARVRSPVREWNVFKQRNPGVMTGLRDEVLQWAHKSPAIHRVIGTDMLLYSFGLSIFKQQTTASLGTNW 226
BLAST of mRNA_H-paniculata_contig15383.3161.1 vs. uniprot
Match: D8LHT4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHT4_ECTSI) HSP 1 Score: 140 bits (353), Expect = 3.100e-38 Identity = 71/140 (50.71%), Postives = 89/140 (63.57%), Query Frame = 1 Query: 1 WKNKAFRQMTFGLYCPPYAFCE----QAKPGAVQAVHEPGGWELLQQIETILGSYTAVGILEEWDLTMELFNAKVKSPVKDWREQNVSNSGKESEIRDHLLSWAHKSPEIHRAMATDMLLYDYAVSIFKEQTKETLGKVW 408 W KA Q++F YCPP AFCE + P + V + W LL E +L SYTAVGI EEW+L+MELF+A + SPV+ W + N G +S R+ LL WAH SPEI +A+ D+LLYD A+SIFK QT E LG VW Sbjct: 155 WMCKAMFQLSFASYCPPGAFCEHDMVEEPPTHLNGVED---WSLLAVAEDVLLSYTAVGIFEEWELSMELFDAVISSPVQQWGGEEAVNPGPKSSEREMLLRWAHSSPEIRQAVGGDLLLYDLALSIFKRQTAEALGTVW 291
BLAST of mRNA_H-paniculata_contig15383.3161.1 vs. uniprot
Match: A0A6H5K2F9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2F9_9PHAE) HSP 1 Score: 119 bits (297), Expect = 4.640e-32 Identity = 54/92 (58.70%), Postives = 69/92 (75.00%), Query Frame = 1 Query: 133 ETILGSYTAVGILEEWDLTMELFNAKVKSPVKDWREQNVSNSGKESEIRDHLLSWAHKSPEIHRAMATDMLLYDYAVSIFKEQTKETLGKVW 408 + IL YTAVGI+E WDL+M+LFNA+V+SPV++W N+GK S +R +L WAH SP IHR + TDMLLY +A+SIFK+QT ETLG W Sbjct: 12 QDILAGYTAVGIVEYWDLSMQLFNARVRSPVREWNSTLHINAGKPSGLRAEVLQWAHDSPAIHRQLGTDMLLYSFALSIFKDQTTETLGTNW 103
BLAST of mRNA_H-paniculata_contig15383.3161.1 vs. uniprot
Match: A0A6H5KCY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCY2_9PHAE) HSP 1 Score: 113 bits (282), Expect = 6.790e-29 Identity = 51/91 (56.04%), Postives = 65/91 (71.43%), Query Frame = 1 Query: 136 TILGSYTAVGILEEWDLTMELFNAKVKSPVKDWREQNVSNSGKESEIRDHLLSWAHKSPEIHRAMATDMLLYDYAVSIFKEQTKETLGKVW 408 TIL Y A+GI+E W L+M+LFNA+V+SPV+DW N G S IRD +L WAH+SP IH A+ TDMLLY +A+SIFK+Q + LG W Sbjct: 90 TILAGYRAIGIMEHWGLSMQLFNARVRSPVRDWNVSTHVNPGGGSGIRDEVLQWAHQSPAIHDALRTDMLLYSFALSIFKQQATDALGTDW 180 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15383.3161.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15383.3161.1 >prot_H-paniculata_contig15383.3161.1 ID=prot_H-paniculata_contig15383.3161.1|Name=mRNA_H-paniculata_contig15383.3161.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=131bp MTFGLYCPPYAFCEQAKPGAVQAVHEPGGWELLQQIETILGSYTAVGILEback to top mRNA from alignment at H-paniculata_contig15383:1863..4199- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15383.3161.1 ID=mRNA_H-paniculata_contig15383.3161.1|Name=mRNA_H-paniculata_contig15383.3161.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2337bp|location=Sequence derived from alignment at H-paniculata_contig15383:1863..4199- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15383:1863..4199- >mRNA_H-paniculata_contig15383.3161.1 ID=mRNA_H-paniculata_contig15383.3161.1|Name=mRNA_H-paniculata_contig15383.3161.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=786bp|location=Sequence derived from alignment at H-paniculata_contig15383:1863..4199- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |