mRNA_H-paniculata_contig15376.3155.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig15376.3155.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 211 bits (536), Expect = 1.430e-63 Identity = 106/236 (44.92%), Postives = 146/236 (61.86%), Query Frame = 1 Query: 7 HRKNRVGSILDQAVRNRITFRSVFQKIHIGEAWFYVIHDRDRVRMIPGEERMGSTKVQHKSHIPKVMYIWAVSRPDPSHDFDGKIGI*RVCAIKQA*RNL-------------AWRERG----------QEYEFDVTINDEWYQKWYKESFLPALKENMPWWEGEKVVAQQDGATPYTGKDPPRKLKELGRNGGWNINIVTQPAQSPDLNIDDLGFFASLKSRVCRERYGTIDGLV 645 HR + + +D+ + + +V +H+ E+WFY++ ++++VR+ GE+ G +V H+SH+PK+M I A +RPDP+HDFDGKIGI R+C I+ A R+ WRE +EYEFD TI+ EWY+ WY + LPA+KE MPW ++VV QQDGA+P+TGK P L G GW + +VTQPAQSPDLNI+DLG FASLK RV +ID LV Sbjct: 132 HRMDFISDRVDEPIGEYLDQGNV---VHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSIDELV 364
BLAST of mRNA_H-paniculata_contig15376.3155.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA) HSP 1 Score: 128 bits (322), Expect = 3.670e-31 Identity = 74/224 (33.04%), Postives = 114/224 (50.89%), Query Frame = 1 Query: 10 RKNRVGSILDQAVRNRITFRSVFQKIHIGEAWFYVIHDRDRVRMIPGEERMGSTKVQHKSHIPKVMYIWAVSRP--DPSHD--FDGKIGI*RVCAIKQA*RNLAWRERGQEYEFDVTINDEWYQKWYKESFLPALKENMPWWEGEKVVAQQDGATPYTGKDPPRKLKELGRNGGWNINIVTQPAQSPDLNIDDLGFFASLKSRVCRERYGTIDGLVEGVKSMYD 669 R N S + + R + + +HI E WFY+ R + +E K Q K HI KVM++ AV+RP D +H +DGK+G+ + A R R+RG +T+ Y+++ + +PA++ P G + QQD A P+ D P L GR GWNI ++ QPAQSPD N+ DLGFF +++S + TID L++ V+ ++ Sbjct: 145 RYNFAKSFIRDGYQGRRQWHDMLDCVHIDEKWFYITQVNRRFYLWH-DEPTPQRKAQSKRHITKVMFLCAVARPRHDSAHRKMWDGKVGLWPFVETQLAKRRSKNRDRGTPVTVPMTVTKPVYRRFLVDKVIPAIQAQWPGRRGATIYVQQDNAKPHVAVDDPEVLA-AGRKEGWNIQLMAQPAQSPDFNVLDLGFFNAIQSLQHQTTARTIDDLIKCVEDAFE 366
BLAST of mRNA_H-paniculata_contig15376.3155.1 vs. uniprot
Match: I6THG9_PSEMU (Tranposase n=1 Tax=Pseudo-nitzschia multiseries TaxID=37319 RepID=I6THG9_PSEMU) HSP 1 Score: 127 bits (320), Expect = 1.110e-30 Identity = 75/204 (36.76%), Postives = 108/204 (52.94%), Query Frame = 1 Query: 64 FRSVFQKIHIGEAWFYVIHDRDRVRMIPGEERMGSTKVQHKSHIPKVMYIWAVSRP----DPSHDFDGKIGI*RVCAIKQA*RNLAWRERGQEYEFDV-TINDEWYQKWYKESFLPALKENMP-WWEGEKVVAQQDGATPYTGKDPPRKLKELGRNGGWNINIVTQPAQSPDLNIDDLGFFASLKSRVCRERYGTIDGLVEGVK 657 F ++ IHI E WFY+ + + GE ST + K I KVM++ AV+RP D + FDGKIGI + A RN R RG ++ ++N YQK E LPA++E P W+ + Q+D A P+ + ++E R GWNI + TQP SPD N+ DLGFFAS+++ ++R ID L+ V+ Sbjct: 226 FEDMYDTIHIDEKWFYLKTTNQKTYLCSGEPEPHST-CKSKRFIEKVMFLCAVARPRHDADRNAGFDGKIGIWPFVVKEPAQRNSVNRPRGTMVTKNIPSVNAAEYQKMMLEKVLPAIQEKFPVCWKSRPIFIQEDNAKPHHLRSR-AAVREAAREAGWNITVTTQPPNSPDFNVLDLGFFASIQALQYKKRAKNIDQLIANVE 427
BLAST of mRNA_H-paniculata_contig15376.3155.1 vs. uniprot
Match: UPI000B8AB67D (uncharacterized protein LOC110800636 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8AB67D) HSP 1 Score: 125 bits (313), Expect = 1.720e-29 Identity = 70/224 (31.25%), Postives = 120/224 (53.57%), Query Frame = 1 Query: 22 VGSILDQAVRNRITFRSVFQKIHIGEAWFYVIHDRDRVRMIPGEERMGSTKVQHKSHIPKVMYIWAVSRPDPSHD----FDGKIGI*RVCAIKQA*RNLAWRERGQ-EYEFDVTINDEWYQKWYKESFLPALKENMPWWEGEKVVAQQDGATPYTGKDPPRKLKELGRNGGWNINIVTQPAQSPDLNIDDLGFFASLKSRVCRERYGTIDGLVEGVKSMYDAYD 678 + I+ + V + F S++ IHI E WFY+ R ++ GEE Q+ +++ KVM++ ++RP ++ FDGK+GI A R+ RERG E + ++ E ++ + LPA++ PW+ + ++ QQD + P+ + L + G+NI ++ QP QSPDLN+ DLGFF +++S ++ ++ LV+ VK Y+AYD Sbjct: 251 LSKIIPRTVHSGPKFSSLYNVIHIDEKWFYMSRKTQRYYLLAGEEEPYRA-TQNSNYLVKVMFLCGIARPIIGYNGEVLFDGKLGIFPFTEEVPAKRSSKNRERGTIEIKAITSVTKEVIRRKIIDELLPAIRSKWPWFASKDILIQQDNSRPHINPNDAEFL-DAATQEGFNIQLICQPPQSPDLNVLDLGFFRAIQSLQHQKFPRDVEALVKAVKEAYEAYD 472
BLAST of mRNA_H-paniculata_contig15376.3155.1 vs. uniprot
Match: W4GGI5_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GGI5_9STRA) HSP 1 Score: 121 bits (303), Expect = 7.080e-29 Identity = 71/211 (33.65%), Postives = 108/211 (51.18%), Query Frame = 1 Query: 64 FRSVFQKIHIGEAWFYV--IHDRDRVRMIPGEERMGSTKVQHKSHIPKVMYIWAVSRPDPSHDF------DGKIGI*RVCAIKQA*RNLAWRERGQEYEFDVTINDEWYQKWYKESFLPALKENMPWWEGEKVVAQQDGATPYTGKDPPRKLKELGRNGGWNINIVTQPAQSPDLNIDDLGFFASLKSRVCRERYGTIDGLVEGVKSMYDA 672 + V +H+ E WFY+ I+ RD + +E + KVQ K HI KVM++ AV+RP DF DGKIG+ + K A R R+RG +T+ Y++ + +PA++ P G + QQ+ A P+ D ++ R GWNI +V QPA SP+ N+ DLGFF +++S + TID L+ V+ Y + Sbjct: 96 WHDVLDYVHLNEKWFYITQINHRD---YLWHDEPIPQRKVQSKRHITKVMFLCAVARP--RFDFGRRVMWDGKIGLWPIVETKVAARRSKNRDRGTPVTVPMTVTKPIYRRLLVDKVIPAIQAKWPGQRGGTIYLQQNNARPHVAVDD-AEVVAASRKNGWNIQLVAQPAMSPNFNVLDLGFFNAIQSLQHQTAMRTIDDLIASVQDAYSS 300
BLAST of mRNA_H-paniculata_contig15376.3155.1 vs. uniprot
Match: A0A397C8F5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C8F5_9STRA) HSP 1 Score: 119 bits (297), Expect = 2.170e-28 Identity = 74/231 (32.03%), Postives = 118/231 (51.08%), Query Frame = 1 Query: 7 HRKNRVG---SILDQAVRNRITFRSVFQKIHIGEAWFYVIHDRDRVRMIPGEERMGSTKVQHKSHIPKVMYIWAVSRPDPSHD----FDGKIGI*RVCAIKQA*RNLAWRERGQEYEFDVTINDEWYQKWYKESFLPALKENMPWWEGEKVVAQQDGATPYTGKDPPRKLKELGRNGGWNINIVTQPAQSPDLNIDDLGFFASLKSRVCRERYGTIDGLVEGVKSMYDAYD 678 H+ +RV S + ++ R + + + +IHI E WFY+ R + +E + K K HI KVM++ AV+RP + +DGK+G+ A++ A R R+RG VT+ + Y+++ + +P +K P + + QQD A P+ D P + GR+ GW I +V QPA SPD N+ DLGFF S+++ R+ ID LV V ++ D Sbjct: 6 HKADRVAFVRSFVRESPRAPMRWHDMHDRIHIDEKWFYLTLVNRRYYLWY-DEAIPVRKCSSKRHIVKVMFLTAVARPRFDYVRKTMWDGKLGMWPFVAVQPAQRTSKNRDRGTLVTTPVTVTKKVYREYLLQHVIPRIKAVWPGHRDQPIYIQQDNARPHVEVDDPAVVA-AGRSDGWAIQLVAQPAMSPDFNVLDLGFFNSIQALQHRQVVTGIDDLVAAVHGAFNELD 234
BLAST of mRNA_H-paniculata_contig15376.3155.1 vs. uniprot
Match: UPI002008F034 (uncharacterized protein LOC125206616 n=4 Tax=Salvia TaxID=21880 RepID=UPI002008F034) HSP 1 Score: 119 bits (297), Expect = 1.150e-27 Identity = 72/221 (32.58%), Postives = 112/221 (50.68%), Query Frame = 1 Query: 22 VGSILDQAVRNRITFRSVFQKIHIGEAWFYVIHDRDRVRMIPGEERMGSTKVQHKSHIPKVMYIWAVSRP----DPSHDFDGKIGI*RVCAIKQA*RNLAWRERG-QEYEFDVTINDEWYQKWYKESFLPALKENMPWWEGEKVVAQQDGATPY-TGKDPPRKLKELGRNGGWNINIVTQPAQSPDLNIDDLGFFASLKSRVCRERYGTIDGLVEGVKSMY 666 + + Q + R+ ++S+ +HI E WFY+ DR ++P E+ + + K +I KVM++ AVSRP D +DGK+GI + A R R RG E + ++ E + +PA+K P W + + QQD ATP+ T DP + + G+ I ++ QPA SPD NI DLGFF +++S + T+D LV V S + Sbjct: 148 LSQLQPQITQGRVQYQSMHNVVHIDEKWFYMTKASDRYYLLPDEDEPYRS-CKSKRYITKVMFMCAVSRPHFGMDGQATYDGKVGIFPFTEVLPAQRKSKNRPRGTMETKAIHSVTKEVMRDCLINKIIPAIKAKWPVWASKDIYIQQDNATPHITAMDP--DFQAAANSDGFKIQLICQPANSPDTNILDLGFFRAIQSLQYEKPCKTVDELVGNVCSSF 365
BLAST of mRNA_H-paniculata_contig15376.3155.1 vs. uniprot
Match: A0A6A4Z9D8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z9D8_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.520e-27 Identity = 66/206 (32.04%), Postives = 111/206 (53.88%), Query Frame = 1 Query: 64 FRSVFQKIHIGEAWFYVIHDRDRVRMIPGEERMGSTKVQHKSHIPKVMYIWAVSRP--DPSHD--FDGKIGI*RVCAIKQA*RNLAWRERGQEYEFDVTINDEWYQKWYKESFLPALKENMPWWEGEKVVAQQDGATPYTGKDPPRKLKELGRNGGWNINIVTQPAQSPDLNIDDLGFFASLKSRVCRERYGTIDGLVEGVKSMYD 669 + + +HI E WFYV R + +E + + K + K HI KVM++ AV+RP D + +DG+IG+ + A R+ R+RG + T+ + Y+ + + +PA++ P + ++ QQD A P+ + P + GR GGW I++ +QPAQSPDLN+ DLG+F +++S + T+D LV V ++ Sbjct: 38 WHDMLDTVHIDEKWFYVTKQNRRYYLW-SDEAVPTRKCRSKKHITKVMFLTAVARPRYDARNKRMWDGRIGMWPFVKTRPALRSSKNRKRGDDVTEPFTVTRDVYRSFLIDKVIPAVRSKWPSSKKNQIWIQQDNAKPHVSVNDPAVVA-AGRQGGWTISLCSQPAQSPDLNVLDLGYFNAIQSLQHQMATYTLDDLVVAVVKSFE 241
BLAST of mRNA_H-paniculata_contig15376.3155.1 vs. uniprot
Match: A0A485KDC6_9STRA (Aste57867_3131 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDC6_9STRA) HSP 1 Score: 117 bits (294), Expect = 2.990e-27 Identity = 71/223 (31.84%), Postives = 111/223 (49.78%), Query Frame = 1 Query: 22 VGSILDQAVRNRITFRSVFQKIHIGEAWFYVIHDRDRVRMIPGEERMGSTKVQHKSHIPKVMYIWAVSRPDPSHD----FDGKIGI*RVCAIKQA*RNLAWRERGQEYEFDVTINDEWYQKWYKESFLPALKENMPWWEGEKVVAQQDGATPYTGKDPPRKLKELGRNGGWNINIVTQPAQSPDLNIDDLGFFASLKSRVCRERYGTIDGLVEGVKSMYDAYD 678 V + + + ++ + + ++HI E WFY+ R + E+ + K K HI KVM++ AV+RP + +DGKIG+ ++ A R RERG VT+ + Y+++ E +P +K+ P + QQD A P+ D + G + GW+I +V QPA SPD N+ DLGFF S+++ RE ID LV V +D D Sbjct: 149 VQAFVRPSTNGQMRWDDMLDRVHIDEKWFYLTLVNRRYYLWHDED-VPVRKCSSKRHIIKVMFLTAVARPRYDYTQRRMWDGKIGMWPFVSVVPAQRKSKNRERGTPVTTPVTVTKKVYREYLLEHVIPTIKKVWPGRRSHPIYIQQDNARPHVEVDD-AAVTLAGHSDGWSIQLVAQPAMSPDFNVLDLGFFNSIQALQHREVVTGIDDLVAAVHRAFDDLD 369
BLAST of mRNA_H-paniculata_contig15376.3155.1 vs. uniprot
Match: UPI001C2701CF (uncharacterized protein LOC121760366 n=3 Tax=Salvia splendens TaxID=180675 RepID=UPI001C2701CF) HSP 1 Score: 117 bits (294), Expect = 3.060e-27 Identity = 71/221 (32.13%), Postives = 111/221 (50.23%), Query Frame = 1 Query: 22 VGSILDQAVRNRITFRSVFQKIHIGEAWFYVIHDRDRVRMIPGEERMGSTKVQHKSHIPKVMYIWAVSRP----DPSHDFDGKIGI*RVCAIKQA*RNLAWRERG-QEYEFDVTINDEWYQKWYKESFLPALKENMPWWEGEKVVAQQDGATPY-TGKDPPRKLKELGRNGGWNINIVTQPAQSPDLNIDDLGFFASLKSRVCRERYGTIDGLVEGVKSMY 666 + + Q + R+ ++S+ +HI E WFY+ DR ++P E+ + K I KVM++ AVSRP D +DGK+GI + R R RG E + ++ E + +PA+K P W + + QQD ATP+ T DP + + + + G+ I ++ QPA SPD NI DLGFF +++S + T+D LV V S + Sbjct: 148 LSQLQPQITQGRVPYQSMHNVVHIDEKWFYMTKASDRYYLLPDEDEPYRA-CKSKRFITKVMFMCAVSRPHFGMDGQPTYDGKVGIFPFTEVMPTQRRSKNRPRGTMETKAVHSVTKEVMRDCLINKIIPAIKARWPVWASKDIYIQQDNATPHITAMDP--EFQAVANSDGFRIQLICQPANSPDTNILDLGFFRAIQSLQYEKPCKTVDELVGNVCSYF 365 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15376.3155.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15376.3155.1 >prot_H-paniculata_contig15376.3155.1 ID=prot_H-paniculata_contig15376.3155.1|Name=mRNA_H-paniculata_contig15376.3155.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=93bp MPWWEGEKVVAQQDGATPYTGKDPPRKLKELGRNGGWNINIVTQPAQSPDback to top mRNA from alignment at H-paniculata_contig15376:3425..4114- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15376.3155.1 ID=mRNA_H-paniculata_contig15376.3155.1|Name=mRNA_H-paniculata_contig15376.3155.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=690bp|location=Sequence derived from alignment at H-paniculata_contig15376:3425..4114- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15376:3425..4114- >mRNA_H-paniculata_contig15376.3155.1 ID=mRNA_H-paniculata_contig15376.3155.1|Name=mRNA_H-paniculata_contig15376.3155.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=558bp|location=Sequence derived from alignment at H-paniculata_contig15376:3425..4114- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |