mRNA_H-paniculata_contig15376.3154.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig15376.3154.1 vs. uniprot
Match: A0A6H5KJT5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT5_9PHAE) HSP 1 Score: 340 bits (872), Expect = 3.200e-115 Identity = 165/226 (73.01%), Postives = 194/226 (85.84%), Query Frame = 1 Query: 1 QVCDDLDFVPMDEFQKKFFLLRQDEWLDYKDQFPGIKQGDLTDPDYFDFISFAQHASIAEAMRNGRQFFEEKVGAEGERRTVQRNPDYADNALLPAEHARRVGDKMLAYIGETFGSTKLAPVTGQGQSTARLAEGCEQILNLLRLNFYMLDYSVSTNLDRRLLMASARTIAPATIWGQRVLAKRKDRPVSDFEAKVILAYLRACGEVGATYSTSFNALDVVHTFQL 678 QV D+LDFVPMD+FQK+FFL RQ EWL YK+ FP IKQGDL DPDYFDFISFAQ+AS+AEAMRNGR FFEEKVGAEGE+RTVQR+ D+ DNA LP EHARRVGD++LAY E FGSTKLAPV QGQ+ A L EGC++I+NLLRLNFY LDY+V+ +LDR++L + R APATIWGQ+VLA+R+DRP +DFEAKVI AYLRACG GATYST+F++LD VHTF+L Sbjct: 85 QVVDELDFVPMDDFQKQFFLFRQREWLGYKENFPRIKQGDLADPDYFDFISFAQYASVAEAMRNGRDFFEEKVGAEGEKRTVQRSADFKDNARLPEEHARRVGDRILAYCTEAFGSTKLAPVVTQGQTVAELREGCDRIMNLLRLNFYTLDYAVTADLDRKVL--TVRATAPATIWGQQVLAQRRDRPANDFEAKVISAYLRACGLEGATYSTAFSSLDAVHTFRL 308
BLAST of mRNA_H-paniculata_contig15376.3154.1 vs. uniprot
Match: D8LI96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI96_ECTSI) HSP 1 Score: 270 bits (691), Expect = 8.170e-89 Identity = 140/226 (61.95%), Postives = 162/226 (71.68%), Query Frame = 1 Query: 1 QVCDDLDFVPMDEFQKKFFLLRQDEWLDYKDQFPGIKQGDLTDPDYFDFISFAQHASIAEAMRNGRQFFEEKVGAEGERRTVQRNPDYADNALLPAEHARRVGDKMLAYIGETFGSTKLAPVTGQGQSTARLAEGCEQILNLLRLNFYMLDYSVSTNLDRRLLMASARTIAPATIWGQRVLAKRKDRPVSDFEAKVILAYLRACGEVGATYSTSFNALDVVHTFQL 678 QV D+LDFVPMD+FQK+FFLLRQ EWL YK FP IKQGDL DPDYFDFISFAQ+AS+AEAMRNGR FFEEK AY E FGSTKLAPV QGQ+ A L EGC++I+NLLRLNFY LDY+V+ +LDR++L + R APATIWGQ+VLA+R+DRP +DFEAKVI AYLRACG GATYST+F+ LD VHTF+L Sbjct: 45 QVVDELDFVPMDDFQKQFFLLRQGEWLGYKQNFPRIKQGDLADPDYFDFISFAQYASVAEAMRNGRDFFEEK-----------------------------------AYCTEAFGSTKLAPVVAQGQTVAELREGCDRIMNLLRLNFYTLDYAVTADLDRKVL--TVRATAPATIWGQQVLAQRRDRPANDFEAKVISAYLRACGLEGATYSTAFSNLDAVHTFRL 233
BLAST of mRNA_H-paniculata_contig15376.3154.1 vs. uniprot
Match: A0A836CM91_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM91_9STRA) HSP 1 Score: 240 bits (612), Expect = 1.870e-75 Identity = 123/229 (53.71%), Postives = 165/229 (72.05%), Query Frame = 1 Query: 4 VCDDLDFVPMDEFQKKFFLLRQDEWLDYKDQFPGIKQGDLTDPDYFDFISFAQHASIAEAMRNGRQFFEEKVGAEGERRTVQRNPDYADNALLPAEHARRVGDKMLAYIGETFGSTKLA-PVTGQGQSTARLAEGCEQILNLLRLNFYMLDYSVSTNLDR---RLLMASARTIAPATIWGQRVLAKRKDRPVSDFEAKVILAYLRACGEVGATYSTSFNALDVVHTFQL 678 V D+LD+ PMD FQ++FFL RQ EW D++ Q PGI QGDLTDP+YFDFISFAQ+A+IA MR+ + F EKVGA+GE +TVQR P+ AD+ALLP EHARRVGD++ YI ETF S A P + +A G E++++ RLNF+ +D V+ + + +L +AR APAT+W Q+VLA+R+D P +DFEAK + AYLRAC +V TY+T+++ LDV HTF+L Sbjct: 108 VADELDYTPMDGFQREFFLFRQGEWQDFQKQHPGILQGDLTDPNYFDFISFAQYATIAAGMRSAQLLFTEKVGADGETQTVQRAPELADDALLPGEHARRVGDRIFTYIMETFASVPEALPQVSVKPPLSIIARGVERVMDKFRLNFFCVDAKVAASTGKDGSAVLTVTAR--APATLWSQQVLAQRRDAPTNDFEAKAVAAYLRAC-QVPHTYTTTYSGLDVTHTFRL 333
BLAST of mRNA_H-paniculata_contig15376.3154.1 vs. uniprot
Match: A0A7S2V3L1_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3L1_9STRA) HSP 1 Score: 190 bits (482), Expect = 5.200e-56 Identity = 106/226 (46.90%), Postives = 143/226 (63.27%), Query Frame = 1 Query: 4 VCDDLDFVPMDEFQKKFFLLRQDEWLDYKDQFPGIKQGDLTDPDYFDFISFAQHASIAEAMRNGR-QFFEEKVGAEGERRTVQRNPDYADNALLPAEHARRVGDKMLAYIGETFGSTKLAPVTGQGQSTARLAEGCEQILNLLRLNFYMLDYSVSTNLDRRLLMASARTIAPATIWGQRVLAKRKDRPVSDFEAKVILAYLRACGEVGATYSTSFNALDVVHTFQL 678 V D++DF+PMDEFQK+FFL R DE+ Y ++ G+ QGDL DP YFDFISFAQ+A+++ M+N Q F EK GAEGE +QR +YADN +LP HA+ VGD+ML Y+ T KLAP + S L G Q + L++LN +MLD+ V + + R PA++W Q+VL ++ +DFEAK+I AYLR CG V Y TSF +VVH+F + Sbjct: 100 VADEMDFIPMDEFQKQFFLYRADEYELYLEENRGVTQGDLADPVYFDFISFAQYATLSRFMKNPPGQVFVEKRGAEGEDFVIQRPQEYADNKVLPIVHAQLVGDRMLEYLS-TEKYEKLAPKVPEKPSVETLLSGIVQAVGLMKLNSFMLDFQVKPVSPKEI---EVRLQGPASLWSQQVLRGQQTVLTNDFEAKLICAYLRKCG-VKPVYRTSFTKTEVVHSFSI 320
BLAST of mRNA_H-paniculata_contig15376.3154.1 vs. uniprot
Match: R1CRK3_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CRK3_EMIHU) HSP 1 Score: 180 bits (456), Expect = 1.050e-51 Identity = 107/223 (47.98%), Postives = 138/223 (61.88%), Query Frame = 1 Query: 7 CDDLDFVPMDEFQKKFFLLRQDEWLDYKDQFPGIKQGDLTDPDYFDFISFAQHASIAEAMRNGRQFFEEKVGAEGERRTVQRNPDYA-DNALLPAEHARRVGDKMLAYIGETFGSTKLAPVTGQGQSTARLAEGCEQILNLLRLNFYMLDYSVSTNLDRRLLMASARTIAPATIWGQRVLAKRKDRPVSDFEAKVILAYLRACGEVGATYSTSFNALDVVHTF 672 D+LDF+PMDEFQK+ FLLRQD+W Y+ P +KQGD++DP+YFDF+S+ Q+A+IA MR+GR FEE + A G V R+P DNA LPA + RVGDK+L I E + LAP S A L EG + + + N Y+L S R SA IAPAT+W Q+VL+ R D V+DFEAK I AYLR C V A+Y+T + +VVH F Sbjct: 141 ADELDFMPMDEFQKRQFLLRQDDWEGYRQPLPPVKQGDISDPNYFDFMSYCQYATIAAGMRDGRVVFEELIDANGTSVVVARDPALPRDNARLPALLSLRVGDKILDAIAERYPG--LAPTVELRPSRAALLEGVKALAQVFEYNNYLL--SARLEPSERGFQLSA--IAPATVWSQQVLSLRGDL-VNDFEAKAIAAYLRRCA-VDASYTTRYEGSEVVHIF 355
BLAST of mRNA_H-paniculata_contig15376.3154.1 vs. uniprot
Match: A0A7S0ETJ5_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0ETJ5_9EUKA) HSP 1 Score: 177 bits (448), Expect = 1.430e-51 Identity = 94/224 (41.96%), Postives = 140/224 (62.50%), Query Frame = 1 Query: 4 VCDDLDFVPMDEFQKKFFLLRQDEWLDYKDQFPGIKQGDLTDPDYFDFISFAQHASIAEAMRNGRQFFEEKVGAEGERRTVQRNPDYADNALLPAEHARRVGDKMLAYIGETFGSTKLAPVTGQGQSTARLAEGCEQILNLLRLNFYMLDYSVSTNLDRRLLMASARTIAPATIWGQRVLAKRKDRPVSDFEAKVILAYLRACGEVGATYSTSFNALDVVHTFQ 675 V D+LD+ PMD+FQ+ FL RQDEW Y++ PG++QG LT+P YFDFISF Q+A+IA M+ + F+E + A G V R P+ A++ALLP H+ RVG+ +LA++ + + K+ P + A + +G + ILN+ +N YML + L+ +APAT+W Q +L R+D P +DFEAK ++AYL+ CG + AT ST+ +V HTF+ Sbjct: 46 VADELDYYPMDKFQQDQFLFRQDEWELYREALPGVQQGFLTEPAYFDFISFVQYATIATTMKEPKMIFDELIDANGTSIVVTRPPELANDALLPMRHSERVGEAVLAWMDDRY--NKIRPKVPSVLTAAAVRDGVQAILNIYEINGYML----LSKLEPTSHGVKITLVAPATLWSQSMLRNRRDLP-NDFEAKTVVAYLKQCG-LPATVSTNIAGNNVEHTFE 261
BLAST of mRNA_H-paniculata_contig15376.3154.1 vs. uniprot
Match: R1DSH8_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DSH8_EMIHU) HSP 1 Score: 180 bits (456), Expect = 3.900e-51 Identity = 107/223 (47.98%), Postives = 138/223 (61.88%), Query Frame = 1 Query: 7 CDDLDFVPMDEFQKKFFLLRQDEWLDYKDQFPGIKQGDLTDPDYFDFISFAQHASIAEAMRNGRQFFEEKVGAEGERRTVQRNPDYA-DNALLPAEHARRVGDKMLAYIGETFGSTKLAPVTGQGQSTARLAEGCEQILNLLRLNFYMLDYSVSTNLDRRLLMASARTIAPATIWGQRVLAKRKDRPVSDFEAKVILAYLRACGEVGATYSTSFNALDVVHTF 672 D+LDF+PMDEFQK+ FLLRQD+W Y+ P +KQGD++DP+YFDF+S+ Q+A+IA MR+GR FEE + A G V R+P DNA LPA + RVGDK+L I E + LAP S A L EG + + + N Y+L S R SA IAPAT+W Q+VL+ R D V+DFEAK I AYLR C V A+Y+T + +VVH F Sbjct: 196 ADELDFMPMDEFQKRQFLLRQDDWEGYRQPLPPVKQGDISDPNYFDFMSYCQYATIAAGMRDGRVVFEELIDANGTSVVVARDPALPRDNARLPALLSLRVGDKILDAIAERYPG--LAPTVELRPSRAALLEGVKALAQVFEYNNYLL--SARLEPSERGFQLSA--IAPATVWSQQVLSLRGDL-VNDFEAKAIAAYLRRCA-VDASYTTRYEGSEVVHIF 410
BLAST of mRNA_H-paniculata_contig15376.3154.1 vs. uniprot
Match: A0A6U4J7M3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4J7M3_9STRA) HSP 1 Score: 171 bits (433), Expect = 6.210e-49 Identity = 104/239 (43.51%), Postives = 144/239 (60.25%), Query Frame = 1 Query: 1 QVCDDLDFVPMDEFQKKFFLLRQDEWLDYKDQFPG-IKQGDLTDPDYFDFISFAQHASIAEAMRNGRQFFEEKVGAEGERRTVQRNPDYADNALLPAEHARRVGDKMLAYIGETFGSTKLAPVTGQGQSTARLAEGCEQILNLLRLNFYMLDYSV-------STNLDRRLLMASARTIAPATIWGQRVLAKRKDR----PVSDFEAKVILAYLRACGEVGATYSTSF-NALDVVHTFQL 678 +V D+LDFV MDEFQK+F+L RQDEWL YKD+ + QGDL +PDYFD+ISF Q+A I ++MR+GR F EK+GAEGE+RTV+R DN LLP EH RRVG +L+++ E F +S+A L G EQ L + + Y ++V S ++ RL + + + P T WGQ+ LA+ +R PV+DFE KV A+L+ G T+F DV+H+ +L Sbjct: 59 EVADELDFVAMDEFQKRFYLFRQDEWLSYKDRVQRFMTQGDLANPDYFDYISFCQYAVIGDSMRSGRLEFIEKIGAEGEQRTVRRAEGLRDNNLLPREHERRVGALLLSHLIERFPGRFPLLEGINARSSADLCGGVEQALRCMAICGYGTQWTVLPEASIGSDDIVPRLRLTISGSSLP-TAWGQKRLARDAERFPGLPVNDFEVKVARAWLQRQGVASRLLRTTFLRDADVIHSIEL 296
BLAST of mRNA_H-paniculata_contig15376.3154.1 vs. uniprot
Match: A0A0G4F5D5_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F5D5_VITBC) HSP 1 Score: 165 bits (418), Expect = 2.740e-46 Identity = 98/233 (42.06%), Postives = 140/233 (60.09%), Query Frame = 1 Query: 4 VCDDLDFVPMDEFQKKFFLLRQDEWLDYKDQFPG--IKQGDLTDPDYFDFISFAQHASIAEAMRNGRQFFEEKVGAEGERRTVQRNPDYADNALLPAEHARRVGDKMLAYIGETFGSTKLAPVTGQGQSTAR-----LAEGCEQILNLLRLNFYML--DYSVSTNLDRRLLMASARTIAPATIWGQRVLAKRKDRPVSDFEAKVILAYLRACGEVGATYSTSFNA-LDVVHTF 672 V D+LDFVPM++FQK FFL RQ+EW Y+++ I QGDL D +YFDFISFAQ+ ++ M +G+Q F EK GA GE + V+R ADN+LLP+EH+RRVGD++L ++ + F + + ++ AR + +QI NL+ + Y + ++ D + PAT+WGQ+VL+ R +D+EAK+ +AY R CG ATY TSF VVHTF Sbjct: 89 VADELDFVPMNDFQKDFFLYRQNEWERYRERLKPMPITQGDLADANYFDFISFAQYLTLYTEMCSGQQLFVEKTGATGEEQLVRRPAFLADNSLLPSEHSRRVGDRLLDFLIDRFNTDESGKTCCIIRAAARPSPSFVVSNVQQIANLMTILGYAEKGEAKLTGERDDGKFSFEMMLVLPATLWGQQVLSIRGAGLPNDYEAKIAMAYTRRCG-YRATYRTSFEGGSSVVHTF 320
BLAST of mRNA_H-paniculata_contig15376.3154.1 vs. uniprot
Match: A0A0M0K8A7_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K8A7_9EUKA) HSP 1 Score: 167 bits (422), Expect = 2.730e-44 Identity = 101/223 (45.29%), Postives = 131/223 (58.74%), Query Frame = 1 Query: 4 VCDDLDFVPMDEFQKKFFLLRQDEWLDYKDQFPGIKQGDLTDPDYFDFISFAQHASIAEAMRNGRQFFEEKVGAEGERRTVQRNPDYAD-NALLPAEHARRVGDKMLAYIGETFGST--KLAPVTGQGQSTAR-LAEGCEQILNLLRLNFYMLDYSVSTNLDRRLLMASART----IAPATIWGQRVLAKRKDRPVSDFEAKVILAYLRACGEVGATYSTSFN 648 V D+LDF+PMDEFQK+ FL RQ EW Y+++ P + QGDLTDP YFDFISF Q+ASIA MR GR FEE + A G V R P N LLP H+ RVGD++L ++ E + + P T A L EGC+++ ++ LN + L +V+ L + A +APAT+WG +VL R D P +DFE +LAYLR CG V AT T F Sbjct: 469 VADELDFMPMDEFQKEQFLFRQREWDTYREKLP-VMQGDLTDPAYFDFISFCQYASIASGMRRGRMIFEELIDANGTSVIVSRAPTLPQRNELLPEAHSIRVGDRLLNWMLERYDGVLRPVIPPTSSALPRAPVLVEGCQRVADIFTLNEFALTSTVTP------LASGAGVAWTLVAPATLWGAQVLQLRGDEPKNDFEVMAVLAYLRRCG-VPATSITRFE 683 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15376.3154.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15376.3154.1 >prot_H-paniculata_contig15376.3154.1 ID=prot_H-paniculata_contig15376.3154.1|Name=mRNA_H-paniculata_contig15376.3154.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=217bp MDEFQKKFFLLRQDEWLDYKDQFPGIKQGDLTDPDYFDFISFAQHASIAEback to top mRNA from alignment at H-paniculata_contig15376:155..1933+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15376.3154.1 ID=mRNA_H-paniculata_contig15376.3154.1|Name=mRNA_H-paniculata_contig15376.3154.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1779bp|location=Sequence derived from alignment at H-paniculata_contig15376:155..1933+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15376:155..1933+ >mRNA_H-paniculata_contig15376.3154.1 ID=mRNA_H-paniculata_contig15376.3154.1|Name=mRNA_H-paniculata_contig15376.3154.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1302bp|location=Sequence derived from alignment at H-paniculata_contig15376:155..1933+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |