mRNA_H-paniculata_contig15181.3058.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig15181.3058.1 vs. uniprot
Match: A0A1W7R6H7_AEDAL (Putative pol polyprotein (Fragment) n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6H7_AEDAL) HSP 1 Score: 73.2 bits (178), Expect = 4.120e-11 Identity = 65/248 (26.21%), Postives = 105/248 (42.34%), Query Frame = 1 Query: 7 WNSDTDATDHMTSDETGFEDYTPALPGTMCEIANGTFVPVAGWGRLVLLVNQPGRKSRVAKLNGVAHVLELGRNLIFIRRATYTWGKSFIYSANKASLGLGEEESLLFNVSASSGLYEVEAVRSAAGTAKALTVKKSSKRDVMDM------HRLLVKASEHITRDTAETAGIVLTGEWGACKRCSTAKAHRFAVPKKTDNQVTCAAERLYVDLGGPM*VISLSGSSYVMIIVDDYSRFQAVKFIKKSD 732 W D+ A+ HM ++ FE+Y L G +A+G VAG G L+ KL V HV L +L+ + R T G +++ N + + ++ S GLY + +R+ K L + ++ + M HR + + D A I C+ C K R PK+T Q + ++ D+ GPM I+ G Y M ++DD++RF V F+K+ D Sbjct: 275 WIVDSGASCHMCGEQDFFENYAE-LSGMTVTLADGNEAAVAGKGSCTLMCLDDVHNHHEVKLTDVLHVPSLDAHLVSVGRFTEK-GADVLFTQNTCKIM--KNGKVVATADKSEGLYRLNLLRN-----KLLKAETKHPKNCIHMWHKKLGHRDPDAIQKLVQEDLATGIRIEKCAVDEDCECCLEGKLSRLPFPKQTGEQSKKMLDLVHTDVCGPMKTITPGGIRYFMTMIDDFTRFTKVYFLKRKD 513
BLAST of mRNA_H-paniculata_contig15181.3058.1 vs. uniprot
Match: A0A6H5GTD8_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GTD8_9HEMI) HSP 1 Score: 68.9 bits (167), Expect = 1.080e-9 Identity = 64/245 (26.12%), Postives = 118/245 (48.16%), Query Frame = 1 Query: 7 WNSDTDATDHMTSDETGFEDYTPALPGTMCEIANGTFVPVAGWGRLVLLVNQPGRKSRVAKLNGVAHVLELGRNLIFIRRATYTWGKSFIYSANKASLGLGEEESLLFNVSASSGLYEVEAVRSAAGTAKALTVKKSSKRDVMDMHRLLVKASEHITRDTA---ETAGIVLTG--EWGACKRCSTAKAHRFAVPKKTDNQVTCAAERLYVDLGGPM*VISLSGSSYVMIIVDDYSRFQAVKFIKK 726 W D+ T HM ++ F + T +AN V G G + + V+ G+K V L+ HV EL NL+ + + T G + +++ A + E+L+ ++GLY V+ V ++ + + +++K SK + + H+ +E + + GI L + C C K + PKK+ ++ + + +++DL GPM V S G+ Y + ++DDYSR+ ++F+KK Sbjct: 267 WCIDSGCTSHMCNEAGRFSSLDTS-DHTRVNLANNDSTDVNGKGTVKMCVSVNGKKQ-VMSLHNTLHVPELRSNLLSVGKIT-DQGLTVTFTSTSAEIKNRSGETLM-RAKRTNGLYLVDEVSGSSNSKEEISLKCESK--IENWHQRFGHLNESDLKSLQAGKKVKGIDLRSNEKLSDCTICLQGKMTQTPFPKKS-SRTSQKLDLIHMDLCGPMRVQSKGGAKYFLTLIDDYSRWCEIRFLKK 504
BLAST of mRNA_H-paniculata_contig15181.3058.1 vs. uniprot
Match: A0A6H5G7E3_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5G7E3_9HEMI) HSP 1 Score: 67.8 bits (164), Expect = 2.570e-9 Identity = 62/245 (25.31%), Postives = 116/245 (47.35%), Query Frame = 1 Query: 7 WNSDTDATDHMTSDETGFEDYTPALPGTMCEIANGTFVPVAGWGRLVLLVNQPGRKSRVAKLNGVAHVLELGRNLIFIRRATYTWGKSFIYSANKASLGLGEEESLLFNVSASSGLYEVEAVRSAAGTAKALTVKKSSKRDVMDMHRLLVKASEHITRDT-----AETAGIVLTGEWGACKRCSTAKAHRFAVPKKTDNQVTCAAERLYVDLGGPM*VISLSGSSYVMIIVDDYSRFQAVKFIKK 726 W D+ T HM + E G T +AN V G G + + V+ G+K V L+ HV EL NL+ + + T G + ++++ A + E+L+ ++GLY V+ V ++ + + +++K SK + + H+ +E + + + + C C K + PKK+ ++ + + +++DL GPM V S G+ Y + ++DDYSR+ ++F+KK Sbjct: 120 WCIDSGCTSHMCN-EAGRFSSVDTSDHTRVNLANNDSTDVNGKGTVKMCVSVNGKKQ-VMSLHNTLHVPELRSNLLSVGKIT-DQGLTVTFTSSSAEIKNRSGETLM-RAKRTNGLYLVDEVSGSSHSKEEISLKCESK--IENWHQRFGHLNESDLKSLQAGKKVKAIDLRSNEKLSDCTICLQGKMTQTPFPKKS-SRTSQKLDLIHMDLCGPMQVQSKGGAKYFLTLIDDYSRWCEIRFVKK 357
BLAST of mRNA_H-paniculata_contig15181.3058.1 vs. uniprot
Match: A0A6L2JCE9_TANCI (Uncharacterized protein (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2JCE9_TANCI) HSP 1 Score: 66.2 bits (160), Expect = 9.890e-9 Identity = 63/256 (24.61%), Postives = 105/256 (41.02%), Query Frame = 1 Query: 7 WNSDTDATDHMTSDETGFEDYTPALPGTMCEIANGTFVPVAGWGRLVLLVNQPGRKSRVAKLNGVAHVLELGRNLIFIRR-------ATYTWGKSFIYSANKASLGLGEEESLLFNVSASSGLYEVEAVRSAAGTAKALTVKKSSKRDVMDMHRLLVKASEHITRDTAETAGI-----VLTGEWGACKRCSTAKAHRFAVPKKTDNQVTCAAERLYVDLGGPM*VISLSGSSYVMIIVDDYSRFQAVKFIKKSDAT 738 W D+ + HMT D + ++ GT+ N F + G+ V+ + R L V +V ELG NL + + + ++ + N L G S L+ +S V ++ + K+SK HR L + D A + + + C C K+ + + KT+N L+++L GPM V +++G Y+++IVDDYSRF VKF++ D T Sbjct: 1095 WYLDSGCSKHMTGDRSRLMNFVKKFIGTV-RFGNDHFGVIMGYEDYVIGDSVISRLHSENTLVXVYYVEELGHNLFSVGQFCDSDLEVAFRKHSCYVRATNGVELIKGSRGSNLYTIS----------VEDMMKSSPICLLSKASKNKSWLWHRCLNHLNFDTINDLARKDLVHGLPRLKFEKDHLCSACQLGKSKKHTLKPKTENTNLEVLNTLHMNLCGPMRVQTINGKKYILVIVDDYSRFTWVKFLRSKDET 1339
BLAST of mRNA_H-paniculata_contig15181.3058.1 vs. uniprot
Match: A0A699JFZ2_TANCI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699JFZ2_TANCI) HSP 1 Score: 65.5 bits (158), Expect = 1.310e-8 Identity = 66/250 (26.40%), Postives = 106/250 (42.40%), Query Frame = 1 Query: 7 WNSDTDATDHMTSDETGFEDYTPALPGTMCEIANGTFVPVAGWGRLVLLVNQPGRKSRVAKLNGVAHVLELGRNLIFIRRATYTWGKSFIYSANKASLGLGEEESL-LFNVSASSGLYEVEAVRSAAGTAKALTVKKSSKRDVMDMHRLLVKASEHITRDTAE---TAGI--VLTGEWGACKRCSTAKAHRFAVPKKTDNQVTCAAERLYVDLGGPM*VISLSGSSYVMIIVDDYSRFQAVKFIKKSDAT 738 W D+ + HMT D + ++ GT+ N F + G+G V+ S+V + G+ H NL F R+ + K S + + + + L S S LY + V ++ + K+SK HR L + D A G+ + + C C K+ + KT+N L++DL GPM V +++G Y+++IVDDYSRF VKF++ D T Sbjct: 70 WYLDSGYSKHMTGDRSRLINFVKKFIGTV-RFRNDHFGAIMGYGDYVI---GDSVISKVYYVEGLRH------NLFFFRQFC---DSDLEVALRKHSYYVQDTDGVKLIKGSRGSNLYTIS-VEDMMKSSPICLLSKASKNKSWLWHRRLNHLNFGTINDLARKYLVRGLPRLKFAKGHLCSACQLGKSRKHTYKPKTENTNVEVLNTLHIDLCGPMRVQTINGKKYILVIVDDYSRFTWVKFLRSKDET 305
BLAST of mRNA_H-paniculata_contig15181.3058.1 vs. uniprot
Match: A0A061GD46_THECC (Integrase catalytic domain-containing protein n=1 Tax=Theobroma cacao TaxID=3641 RepID=A0A061GD46_THECC) HSP 1 Score: 63.9 bits (154), Expect = 5.110e-8 Identity = 34/78 (43.59%), Postives = 48/78 (61.54%), Query Frame = 1 Query: 505 VLTGEWGACKRCSTAKAHRFAVPKKTDNQVTCAAERLYVDLGGPM*VISLSGSSYVMIIVDDYSRFQAVKFIK-KSDA 735 V+T C C K RF+ PK +D + T + ++ DLGGPM ISLSGS+Y MI +DD+ R+ + F+K KS+A Sbjct: 275 VVTASDHLCATCQFGKQSRFSFPKSSDFRATEKLQLVHSDLGGPMQTISLSGSAYYMIFIDDFLRYCWIYFLKHKSEA 352
BLAST of mRNA_H-paniculata_contig15181.3058.1 vs. uniprot
Match: A0A4Y2X7E0_ARAVE (Copia protein n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2X7E0_ARAVE) HSP 1 Score: 63.5 bits (153), Expect = 6.240e-8 Identity = 69/242 (28.51%), Postives = 108/242 (44.63%), Query Frame = 1 Query: 16 DTDATDHMTSDETGFEDYTPALPGTMCEIANGTFVPVAGWGRLVLLVNQPGR--KSRVAKLNGVAHVLELGRNLIFIRRATYTWGKSFIYSANKASLGLGEEESLLFNVSASSGLYEVEAVRSAAGTAKALTVKKSSKRDVMDMHRLLVKASEHITRDTAETAGIVLTGEWGACKRCSTAKAHRFAVPKKTDNQVTCAAERLYVDLGGPM*VISLSGSSYVMIIVDDYSRFQAVKFIK-KSD 732 D+ AT HM S FE+ P+ GT+ A + + VAG G L GR + L V + EL NLI +++ G S ++ NK + G+ ++ ++ S G Y + + + + T A T + R RL + + + T+ + C+ C +K + K + + +Y DL GP+ +LSG SYV+ VDDYSRF V+ IK KSD Sbjct: 164 DSGATSHMCSQREWFEELKPSS-GTVSCAAKSSLLEVAGTGAL------RGRLKNGQEIVLINVLFIPELNVNLISVKQIQKA-GYSVLFKDNKVIVK-GKNKTFVWRELNSKGQYVSDFITTVSNTFVAETEEAELSR-----RRLGYSGNHALGKLGIPTSDLF-------CENCVLSKQSAEPIGKGNCRRESTTMRMIYSDLSGPVEPATLSGESYVLTFVDDYSRFCEVRLIKRKSD 384
BLAST of mRNA_H-paniculata_contig15181.3058.1 vs. uniprot
Match: A0A699KYG2_TANCI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699KYG2_TANCI) HSP 1 Score: 63.2 bits (152), Expect = 7.370e-8 Identity = 28/70 (40.00%), Postives = 42/70 (60.00%), Query Frame = 1 Query: 529 CKRCSTAKAHRFAVPKKTDNQVTCAAERLYVDLGGPM*VISLSGSSYVMIIVDDYSRFQAVKFIKKSDAT 738 C C K+ ++ KT+N LY+DL GPM V +++G Y+++IVDDY+RF VKF++ D T Sbjct: 170 CFACQLGKSKKYTHSPKTENSNLEVLNTLYIDLCGPMRVQTINGKKYILVIVDDYTRFTRVKFLRSKDET 239
BLAST of mRNA_H-paniculata_contig15181.3058.1 vs. uniprot
Match: A0A6L2NB55_TANCI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2NB55_TANCI) HSP 1 Score: 63.5 bits (153), Expect = 7.440e-8 Identity = 28/70 (40.00%), Postives = 44/70 (62.86%), Query Frame = 1 Query: 529 CKRCSTAKAHRFAVPKKTDNQVTCAAERLYVDLGGPM*VISLSGSSYVMIIVDDYSRFQAVKFIKKSDAT 738 C C K+ ++A KT N + L++DL GPM V S++G Y+++I+DDYS+F+ VKF++ D T Sbjct: 931 CSACQLGKSKKYAYKPKTVNIIIEVLHTLHMDLCGPMRVQSINGKKYILVIIDDYSKFKWVKFLRTKDKT 1000
BLAST of mRNA_H-paniculata_contig15181.3058.1 vs. uniprot
Match: A0A699HJP8_TANCI (Integrase, catalytic region, zinc finger, CCHC-type, peptidase aspartic, catalytic n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699HJP8_TANCI) HSP 1 Score: 63.2 bits (152), Expect = 9.110e-8 Identity = 29/70 (41.43%), Postives = 43/70 (61.43%), Query Frame = 1 Query: 529 CKRCSTAKAHRFAVPKKTDNQVTCAAERLYVDLGGPM*VISLSGSSYVMIIVDDYSRFQAVKFIKKSDAT 738 C C K++++A K N + L++DL GPM V S++G Y+++IVDDYSRF VKF++ D T Sbjct: 364 CSACQLEKSNKYAHKPKIVNTIMEVLHTLHIDLCGPMRVQSINGKKYILVIVDDYSRFTWVKFLRTKDET 433 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15181.3058.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15181.3058.1 >prot_H-paniculata_contig15181.3058.1 ID=prot_H-paniculata_contig15181.3058.1|Name=mRNA_H-paniculata_contig15181.3058.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=202bp MTSDETGFEDYTPALPGTMCEIANGTFVPVAGWGRLVLLVNQPGRKSRVAback to top mRNA from alignment at H-paniculata_contig15181:821..1558+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15181.3058.1 ID=mRNA_H-paniculata_contig15181.3058.1|Name=mRNA_H-paniculata_contig15181.3058.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=738bp|location=Sequence derived from alignment at H-paniculata_contig15181:821..1558+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15181:821..1558+ >mRNA_H-paniculata_contig15181.3058.1 ID=mRNA_H-paniculata_contig15181.3058.1|Name=mRNA_H-paniculata_contig15181.3058.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1212bp|location=Sequence derived from alignment at H-paniculata_contig15181:821..1558+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |