mRNA_H-paniculata_contig15178.3056.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig15178.3056.1
Unique NamemRNA_H-paniculata_contig15178.3056.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig15178.3056.1 vs. uniprot
Match: A0A6H5JT74_9PHAE (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JT74_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 2.480e-47
Identity = 101/205 (49.27%), Postives = 133/205 (64.88%), Query Frame = 1 
Query:   76 SMRRRSTDIVLGTLF-MAGLAVSRSFCFVPSIVGRGGHGTERLSSHPTTQAQFSVSQGWTRTGGSVTMLQGKNHKGRRGPGLTNVQRVVNLREREATSAEPQKVMICNLDYSLDEKDIEEFCSSAGMVVGVKLIRKRNAKTSKGYAFVDYDAAVQATIAIEQLTGVELKGRRVEVKPAVTTQERLKKEKFAVWMDKQGKMEEERR 687
            ++RRRS  I+   L   AGL   + FCFVP++ G           H  T  + +  Q   + GG +TM +G ++KG+ GPGLTN+ RVV  R+R   S EP KVMI NLDYSL E D+ EFCS+AG V GVKL++K  AKTSKGY FVD+D  + ATIAIE L G ELKGR VE+KPA+T++E+ +K+    W  +Q  +EE+RR
Sbjct:    3 TVRRRSFAIMASALCGAAGLTRVQGFCFVPALTG------SNTRCHGATAERQATQQ--AQQGGGLTMRRGLSYKGKNGPGLTNIGRVVTTRKRVLESEEPCKVMISNLDYSLTENDVAEFCSTAGAVAGVKLVKKWYAKTSKGYGFVDFDQPLTATIAIETLNGKELKGRVVELKPAITSREKRRKQALRDW--EQRCLEEDRR 197
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BLAST of mRNA_H-paniculata_contig15178.3056.1 vs. uniprot
Match: I4AKB7_BERLS (RRM domain-containing RNA-binding protein n=3 Tax=Cytophagales TaxID=768507 RepID=I4AKB7_BERLS)

HSP 1 Score: 67.8 bits (164), Expect = 1.030e-10
Identity = 31/79 (39.24%), Postives = 50/79 (63.29%), Query Frame = 1 
Query:  388 ICNLDYSLDEKDIEEFCSSAGMVVGVKLIRKRNAKTSKGYAFVDYDAAVQATIAIEQLTGVELKGRRVEVKPAVTTQER 624
            + NL YS+ E+++E   S  G+V   K+I  R  + S+G+ FV+ ++      AIE+L GVELKGR ++VK A+  ++R
Sbjct:    5 VSNLPYSISEEELEAVFSELGVVTSTKIITDRETRRSRGFGFVEMESEEDGEAAIEELNGVELKGREIQVKKAIPREDR 83
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BLAST of mRNA_H-paniculata_contig15178.3056.1 vs. uniprot
Match: UPI00047AF65D (RNA-binding protein n=1 Tax=Hugenholtzia roseola TaxID=1002 RepID=UPI00047AF65D)

HSP 1 Score: 65.5 bits (158), Expect = 7.150e-10
Identity = 31/78 (39.74%), Postives = 48/78 (61.54%), Query Frame = 1 
Query:  388 ICNLDYSLDEKDIEEFCSSAGMVVGVKLIRKRNAKTSKGYAFVDYDAAVQATIAIEQLTGVELKGRRVEVKPAVTTQE 621
            + NL YS  E+++E   +  G VV VK+I  R  + S+G+ FV+      A+ A+EQL G E+KGR ++VK A+  +E
Sbjct:    5 VSNLPYSASEQEVESLFAEYGDVVSVKIILDRETRRSRGFGFVEMQNEEDASAAVEQLNGFEMKGREIQVKKAIPREE 82
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BLAST of mRNA_H-paniculata_contig15178.3056.1 vs. uniprot
Match: A0A2M7NHU7_9BACT (RNA-binding protein n=1 Tax=Flexibacter sp. CG_4_10_14_3_um_filter_32_15 TaxID=1975530 RepID=A0A2M7NHU7_9BACT)

HSP 1 Score: 60.1 bits (144), Expect = 5.100e-8
Identity = 28/81 (34.57%), Postives = 46/81 (56.79%), Query Frame = 1 
Query:  382 VMICNLDYSLDEKDIEEFCSSAGMVVGVKLIRKRNAKTSKGYAFVDYDAAVQATIAIEQLTGVELKGRRVEVKPAVTTQER 624
            + + NL YS+ E+++E   S  G+V   K+I  R    S+G+ FV+ +       AIE+L G+EL  R ++VK A+  + R
Sbjct:    3 IYVSNLPYSILEEELEAIFSELGVVTSTKIITDRETGRSRGFGFVEMETEEDGLAAIEELNGIELSSREIQVKKAIPRENR 83
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BLAST of mRNA_H-paniculata_contig15178.3056.1 vs. uniprot
Match: A0A7S2V4S3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4S3_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 2.740e-7
Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = 1 
Query:  379 KVMICNLDYSLDEKDIEEFCSSAGMVVGVKLIRKRNAKTSKGYAFVDYDAAVQATIAIEQLTGVELKGRRVEVKPAVTTQERLKKEK 639
            KV + N  Y+  E+++ E+CS AG V  VK+I+ +  K S+GY +V+Y  +  AT AI  L   +L GR V +  A   +E LK EK
Sbjct:   81 KVHVSNFPYTTTEEELREWCSQAGEVFAVKIIKNQWTKKSQGYGYVEYTISPYATAAINFLNETQLGGRTVYIAEA---EEHLKPEK 164
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BLAST of mRNA_H-paniculata_contig15178.3056.1 vs. uniprot
Match: UPI0003715129 (RNA-binding protein n=1 Tax=Bacteroides propionicifaciens TaxID=392838 RepID=UPI0003715129)

HSP 1 Score: 55.1 bits (131), Expect = 2.400e-6
Identity = 27/75 (36.00%), Postives = 47/75 (62.67%), Query Frame = 1 
Query:  382 VMICNLDYSLDEKDIEEFCSSAGMVVGVKLIRKRNAKTSKGYAFVDYDAAVQATIAIEQLTGVELKGRRVEVKPA 606
            + I NL+Y ++E ++++     G VV VKLI  R+   S+G+AFV+ + A  A  AI++L G + +GR + ++ A
Sbjct:    3 IYIGNLNYQVEEANVQQMLEDFGPVVSVKLILDRDTGRSRGFAFVEMENAEDANRAIKELNGADYEGRALVLREA 77
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BLAST of mRNA_H-paniculata_contig15178.3056.1 vs. uniprot
Match: A0A1I2HZS2_9BACT (RNA recognition motif. (A.k.a. RRM, RBD, or RNP domain) n=1 Tax=Thermoflexibacter ruber TaxID=1003 RepID=A0A1I2HZS2_9BACT)

HSP 1 Score: 55.8 bits (133), Expect = 3.100e-6
Identity = 27/76 (35.53%), Postives = 46/76 (60.53%), Query Frame = 1 
Query:  382 VMICNLDYSLDEKDIEEFCSSAGMVVGVKLIRKRNAKTSKGYAFVDYDAAVQATIAIEQLTGVELKGRRVEVKPAV 609
            + + N+ + L E +++E  +  G V  VK+I  +    SKG+ F++ +   +A  AIEQL G+EL GR ++VK A+
Sbjct:    3 IYVSNISFKLTEGELQEAFAEFGEVSSVKIITDKFTGKSKGFGFIEMENDDEAANAIEQLNGIELGGREIQVKKAL 78
[Close]
BLAST of mRNA_H-paniculata_contig15178.3056.1 vs. uniprot
Match: UPI00125E80D6 (29 kDa ribonucleoprotein A, chloroplastic-like n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125E80D6)

HSP 1 Score: 58.2 bits (139), Expect = 5.150e-6
Identity = 28/76 (36.84%), Postives = 44/76 (57.89%), Query Frame = 1 
Query:  379 KVMICNLDYSLDEKDIEEFCSSAGMVVGVKLIRKRNAKTSKGYAFVDYDAAVQATIAIEQLTGVELKGRRVEVKPA 606
            ++ + NL + +DE  +E      G V+  K++  R +  SKG+ FV Y +A +A+ A+E L G EL GR + V PA
Sbjct:  200 RLHVGNLSWGVDEDALESLFCEHGKVMEAKVVYDRESGRSKGFGFVTYSSAEEASSAVENLNGAELNGRPIRVSPA 275
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BLAST of mRNA_H-paniculata_contig15178.3056.1 vs. uniprot
Match: W0EVL5_9BACT (RNA-binding protein n=4 Tax=Niabella TaxID=379899 RepID=W0EVL5_9BACT)

HSP 1 Score: 53.9 bits (128), Expect = 7.330e-6
Identity = 27/79 (34.18%), Postives = 44/79 (55.70%), Query Frame = 1 
Query:  388 ICNLDYSLDEKDIEEFCSSAGMVVGVKLIRKRNAKTSKGYAFVDYDAAVQATIAIEQLTGVELKGRRVEVKPAVTTQER 624
            + NL +   + D+ E  SS G V   K+I  R    S+G+ FV+  +   AT+A+++L G ++ GRR+ V  A   +ER
Sbjct:    5 VSNLGFHASDDDLRELFSSFGQVSSAKVIMDRTTGKSRGFGFVEMGSVSDATLAMKELDGKDVDGRRIAVSAAKEREER 83
[Close]
BLAST of mRNA_H-paniculata_contig15178.3056.1 vs. uniprot
Match: A0A316K969_9FLAO (RNA-binding protein n=1 Tax=Fluviicola sp. XM-24bin1 TaxID=2133950 RepID=A0A316K969_9FLAO)

HSP 1 Score: 53.9 bits (128), Expect = 8.080e-6
Identity = 28/83 (33.73%), Postives = 49/83 (59.04%), Query Frame = 1 
Query:  382 VMICNLDYSLDEKDIEEFCSSAGMVVGVKLIRKRNAKTSKGYAFVDYDAAVQATIAIEQLTGVELKGRRVEVKPAVTTQERLK 630
            + I NLD+S+  +D+    SS G V    ++ ++  K S+G+ +V+ +   +A  AIE L G+E+ GR+++VK A   + R K
Sbjct:    4 IFIANLDWSITSEDLRATFSSFGKVDYAHVVYEKKTKRSRGFGYVEMENTDEAIRAIEALNGMEVNGRKLDVKIASPKENRPK 86
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15178.3056.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A6H5JT74_9PHAE2.480e-4749.27RRM domain-containing protein n=2 Tax=Ectocarpus T... [more]
I4AKB7_BERLS1.030e-1039.24RRM domain-containing RNA-binding protein n=3 Tax=... [more]
UPI00047AF65D7.150e-1039.74RNA-binding protein n=1 Tax=Hugenholtzia roseola T... [more]
A0A2M7NHU7_9BACT5.100e-834.57RNA-binding protein n=1 Tax=Flexibacter sp. CG_4_1... [more]
A0A7S2V4S3_9STRA2.740e-740.23Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
UPI00037151292.400e-636.00RNA-binding protein n=1 Tax=Bacteroides propionici... [more]
A0A1I2HZS2_9BACT3.100e-635.53RNA recognition motif. (A.k.a. RRM, RBD, or RNP do... [more]
UPI00125E80D65.150e-636.8429 kDa ribonucleoprotein A, chloroplastic-like n=2... [more]
W0EVL5_9BACT7.330e-634.18RNA-binding protein n=4 Tax=Niabella TaxID=379899 ... [more]
A0A316K969_9FLAO8.080e-633.73RNA-binding protein n=1 Tax=Fluviicola sp. XM-24bi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15178contigH-paniculata_contig15178:2..5518 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score67.4
Seed ortholog evalue1.2e-08
Seed eggNOG ortholog880071.Fleli_2018
Preferred namerbp3
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
EggNOG OGs47X4S@768503,4NV5J@976,COG0724@1,COG0724@2
COG Functional cat.S
Best tax levelCytophagia
Best eggNOG OGNA|NA|NA
Exons5
Model size1004
Cds size798
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929216.3858051-UTR-H-paniculata_contig15178:1..1351622929216.3858051-UTR-H-paniculata_contig15178:1..135Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15178 2..135 -
1691480774.1037545-UTR-H-paniculata_contig15178:1..1351691480774.1037545-UTR-H-paniculata_contig15178:1..135Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15178 2..135 -
1622929217.0200381-UTR-H-paniculata_contig15178:5446..55181622929217.0200381-UTR-H-paniculata_contig15178:5446..5518Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15178 5447..5518 -
1691480774.175811-UTR-H-paniculata_contig15178:5446..55181691480774.175811-UTR-H-paniculata_contig15178:5446..5518Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15178 5447..5518 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929216.3994017-CDS-H-paniculata_contig15178:135..1951622929216.3994017-CDS-H-paniculata_contig15178:135..195Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15178 136..195 -
1691480774.1156547-CDS-H-paniculata_contig15178:135..1951691480774.1156547-CDS-H-paniculata_contig15178:135..195Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15178 136..195 -
1622929216.9707148-CDS-H-paniculata_contig15178:1158..14651622929216.9707148-CDS-H-paniculata_contig15178:1158..1465Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15178 1159..1465 -
1691480774.135008-CDS-H-paniculata_contig15178:1158..14651691480774.135008-CDS-H-paniculata_contig15178:1158..1465Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15178 1159..1465 -
1622929216.987053-CDS-H-paniculata_contig15178:2118..22401622929216.987053-CDS-H-paniculata_contig15178:2118..2240Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15178 2119..2240 -
1691480774.145938-CDS-H-paniculata_contig15178:2118..22401691480774.145938-CDS-H-paniculata_contig15178:2118..2240Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15178 2119..2240 -
1622929216.9992125-CDS-H-paniculata_contig15178:3463..36011622929216.9992125-CDS-H-paniculata_contig15178:3463..3601Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15178 3464..3601 -
1691480774.1555882-CDS-H-paniculata_contig15178:3463..36011691480774.1555882-CDS-H-paniculata_contig15178:3463..3601Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15178 3464..3601 -
1622929217.0111592-CDS-H-paniculata_contig15178:5275..54461622929217.0111592-CDS-H-paniculata_contig15178:5275..5446Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15178 5276..5446 -
1691480774.1651742-CDS-H-paniculata_contig15178:5275..54461691480774.1651742-CDS-H-paniculata_contig15178:5275..5446Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15178 5276..5446 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15178.3056.1prot_H-paniculata_contig15178.3056.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig15178 136..5446 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig15178.3056.1

>prot_H-paniculata_contig15178.3056.1 ID=prot_H-paniculata_contig15178.3056.1|Name=mRNA_H-paniculata_contig15178.3056.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=266bp
MSMRRRSTDIVLGTLFMAGLAVSRSFCFVPSIVGRGGHGTERLSSHPTTQ
AQFSVSQGWTRTGGSVTMLQGKNHKGRRGPGLTNVQRVVNLREREATSAE
PQKVMICNLDYSLDEKDIEEFCSSAGMVVGVKLIRKRNAKTSKGYAFVDY
DAAVQATIAIEQLTGVELKGRRVEVKPAVTTQERLKKEKFAVWMDKQGKM
EEERRATEDGVALDVEAEVTTEPEPVETAQEVAEAEPVQAAEEATEVDGG
EAKRNHRIVQDHRQA*
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mRNA from alignment at H-paniculata_contig15178:2..5518-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig15178.3056.1 ID=mRNA_H-paniculata_contig15178.3056.1|Name=mRNA_H-paniculata_contig15178.3056.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5517bp|location=Sequence derived from alignment at H-paniculata_contig15178:2..5518- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTTCGGTCTAGACACCACGCTGATTCCCTGCCTGTACGACAAGGGATCAG
GCGCAGATATAACACTAGCAGAATGTCTATGCGGAGGAGATCGACGGATA
TCGTGCTAGGCACGTTGTTCATGGCTGGCTTGGCGGTTTCCCGCTCTTTT
TGCTTTGTGCCGTCGATTGTTGGCCGGGGTGGTCATGGGACTGAGCGGCT
GTCATCTCATCCGACCACGCAAGCGCAGTTCTCAGTATCCCAGGTACGGT
CGTATGCCTACCCATGTTCCCCCTTCCACATGGACATGAGTTGTTTGTGC
TGTTGAATCTGCTGGAAGCTAGAGTCTATGTGTGGCGGTGCGGTGGTTTC
TCCGATACAGAGATATGTCATGTGCTTCAGCTTGTTGCACCGAAGCAAAA
TTGATGAACAATCTTACACATCTAACAATCATGAGTTGGGTTGCCTACTT
TTCATGTGTCCGCACGTTCAACCGAGTCACGCGCTGCCTGACCGGCTGCA
TTTCAACATGAAGGGAAAGATGGTGTTGTGTAATAGGCCAGAAAATGTGC
ATGATCTACGCAGATGTAGCTGGCATGTGCGCGATTGTGTGTGGATATCA
CACATTCGTTGGGGGGGAAATACCTGTCGCGTTGACACGCGTACTTTGCT
GCTCATACATTGGGAGGTACATATGTGGCCAGCAAACTGCTGGATACAGT
CAGGTACTGTCGTACCGAGGCACAGACTTGGTATTGACACATCATTAGGA
CATGCCGATCATGTCGCAGCGATAGGGCACATGGCACAGCGATCTCGATA
ACAGAGAGCTTCTCGGTGTCCTACAGGAATTTCTGAGTTTCATTGTCGGT
GTTTGGGTGCTGCCAGATTACTCTTTTGTTTAGTCGGAACGTAATGGACA
ATTCCTCACTAACTTGGTGGATAAGACTGTTCTTGAGTGCAGGACAGTGG
TCCGGAATGACAAGGTACCGTGCGCTTCGCTCGGCTGTTCATGTTGACAT
TTGCAACATACAAATACGAGTATACAGTTGGTTTCTCAGCGACGCGTACC
CACTCTTGCTTGCCTGGGAAGCCTCTTCACGACCAGGTTTCTGTACGTGG
GTTGCTCACTTGTTGAGGAAATGAACCGCATGGTGGTGTTTGAAGCGACA
GCTGTCCCGAGTGCACGAGACTGGACTACGTAAAACTTATCATGATCCTT
TGGGAACTAAAGCGCCATAAATCCTCGAAATAAATGTAGGTACAGACGGT
TTTTTTCGCGAGGTATATGGATATTTACAAAACGGAGGCTCGTATGGACA
TGAAAAGCTGCAACTATTTCCGAGAAGAACTGCGTCTGTTATTGACCACC
GCAATGAACGTCGAACTCAACATACAGTGAGAGTGAAATGTCAGCATGGA
GTGCGTTTGAAAGAACTGCGAAGTGCTATGCTTTATTCGAGAACGCGTGA
CCTGTTTTGCACTGTAAAGGGAGATGGCGAGTATCGAAACCGATGTTGCC
GGCATAGATATGATAGCAACTCTAAGCAAAGGCTAGGGTTGGTAAAAAGC
CAAATCAAGCGACCATCCGCCGGAGGTTGTAACACTAGAGTTTCGAAGTA
CCTCACATGGGTCGCGGGTACCCACCTAACTACTATTTACGTGACTGTAC
TGTACTGTTGGGTCCGCACAGCGTATAGTCTTTTCCTGCTTGGCTATCGT
GTTTGCCTGGTCTACCATTGTGTAACGTGGCTCCGTTCAACGCCCACCGT
TGCAGGTCAAAACTAGAAGCAGCTGAAATGTGATCTACTGGAACATCCGA
ATGCCCGGCCAAAGAACAAAACCGCAGAGCGCGAAAGCTTGCAAAGGCTG
TACAAATTAGACGCCAACTTCCGCTATGTTTTTTTCGTTTTTCGTTTCAT
ATCTTTTTGCTTGGCAGGGCTGGACGCGGACCGGAGGAAGCGTGACGATG
TTGCAGGGCAAAAACCATAAGGGCAGGCGAGGGCCAGGCCTTACAAACGT
GCAGCGCGTGGTCAACCTGAGGGAACGCGAAGCCACCAGCGCGGAGCCCC
AAAAGGTCAGAAATGGCTCGACAAAATATCGTGGATTAGAGGTGGAATTA
CGCCGCATTTGTATTGCGATACATGATTGTTCAGGGCATTCCTGTACACG
CATGTACAGTGAAGTAGTAAGGGTGATAAGATTAGGATCATCAGCAAATA
ACGTTATTCGTCTCACATGGTGTGGTTCGTAGAGCGTTGTCCCCAGCCGG
TCCCTACACGTCGAGGTGTAGAGCTGTACGTTGTACACAGGTTCCAGTCT
CTCCTGCGAAGGAACGGAAGACCTGTCAAAACCAATTCTGCAACCTGTAT
CTAGTTACATTTTAGTTCTGTGTTATAGTGGATGTTGAGTCTAACTCTTT
CAGCTTGACTCACTCTGGGTCTTGACTGCACGTAACAGTTTAGGGACAGA
TGGATGAAGCTAATTTTTTACGCATCTCCGCGCGGTAGAATTAGTATTCT
TGGTTATTCGTGGTAAGACAAACAGCGCTCTACTCTAGCAGGAAAACAAT
ATTTTCTTCGTATGGTCGAAAGTCGCGCTGAAAGGATACGAATATCCACG
TGGTCCATGATTGAAAACGCGTGGAACAATTGGCGATAATGGTCGGAAAA
GAACCAACCAATCATCACGATCATAAGTCCATCGATTAACATGGAGGGAT
TTGATTGTTCACACAAAGCTAGCCTAAAGAGTGGCTTCACTTTCGGGCCT
CGGAGGACCACCAAATCTGAGAAGAGGGGTCGCGATCTGCCTACTCCAAG
TATGGTTTAGAGCAAGACGTTACTCTCTGTCAAAAGGGTAGTCTTGGACT
TGTGTGCCGAGGTTGAACCCCCAGACTAATACGAATAATGGGAATATCAT
CACGAAAAAAAACAAGTATTGGTCTGAGTTTCAAAATGAGCGGACACATG
AAATGAAGTACCCACCCCTGTCCATTCGATTCACGAGTATTATTAGCAGG
CGTGGATGGTCCGGGGCGCATAAATACACGAGCTCATTCTGACACTTGAG
CGAATACTTGTTCATTTTGGTGGCGAATACGCAGTTTATTCGTATTCGTT
GGGGGGTGCAGGGTGATAACGGAGCTGTTTTTACTGTACGCTATGGAAAG
TGTGTTGTGTGGATGATTCATGGGCTAAGCAGAGGTGATCATCTATGTGG
TGACGAAAATTAATCGTTCAAGTTTGCACATGGTGTGATTTCGATTCTTC
TTGTCTTTCCCCTTCACCGGATGATCAGGTGATGATTTGCAACCTGGACT
ACAGCCTCGATGAGAAAGACATCGAGGAGTTCTGCAGCTCAGCGGGGATG
GTGGTGGGTGTCAAGCTCATCAGGAAGCGAAACGCTAAGACTTCCAAGGG
GTAAGATTTGGAACAGTGACGTTGTTTCTATAGATTTTCTGTCGAAGTTT
GCCGATATGTCTGTAGATTTTGGTATTTGCTTCGACTGCCGACCGTCGAC
GAATGCTGACCATTCACCCATACTCTCTGGAGAGAGCTCTATGGCGTATT
TTTCTTGTACAGCGCAATGGGGTTGAGAGCTCAAGCAGGAAATTAAACCG
TCTAGATCGAGGTTGGAAACGCAGGCCGATGTTCAGGTAATGGTTGGACA
TGACAGTAAATTTTGAAGAATTAATAGAACTCGTAGATCAGAGCCGGCAA
CTCTTTCGGTAACATTTTTCTCGCAACCCCAAGGTTCTCCTCTTTGAATT
TTTGAATCTCCGGCTTTGTGCTCTCAAACCTGTGTAACAGTTCTAACTCG
GACTCTTTCCCCCATTGCATATAGACATGGACATGTAGACACACATATAT
ATATACACATACACATACATGTACTCCCTTTTTTCCGTACTCGGCGGTTC
AATCGATTGATTTTGTTTTAAGGTTTCCCGTTGTTTTTTTATCTCTTTTT
GTAGATTTCCCAACAGTTTTCAAAATCACCCCTCTTCTCCCCAATTTTTG
TTCTTATTTTCTATTCGATATCGGCTTCTTTTCCACTATTTTTAACTGCA
AAGGTACGCTTTTGTGGACTACGATGCCGCCGTACAAGCCACCATCGCGA
TTGAGCAGCTCACGGGGGTCGAGCTCAAGGGGCGGCGAGTAGAGGTGAAG
CCGGCGGTCACGACACAAGAGCGGCTGAAAAAGGAGAAGTTCGCTGTCTG
GATGGACAAGCAAGGGAAGATGGAAGAGGAGAGGAGAGCCACGGAGGACG
GCGTTGCGCTTGACGTCGAAGCTGAGGTTACCACTGAGCCGGAGCCTGTA
GAAACCGCCCAAGAGGTCGCTGAGGCGGAGCCGGTGCAAGCTGCCGAAGA
GGCCACGGAGGTGGTTGCGGTGGAGGAGGGAGCTCCCGTCTCCTAATGCT
ACTAGTAACTATTTGAAGTGGTTGACTGTCTGAGCTGTGCTAGCTGCACC
GCTGTCAGCTAGATTTTGCGGTGCCTGCTGCGCACTCAATTGAGTGTGAA
TACGATAAAATGTTAAAGGGTGACTTGATTTACGTATAAACGTTTTTTCA
AATGTATACCGTCTGGGCAACGTTTTTTCAAATGTAATCTACTGGTTTCA
CAGGATGGTATAACTGGGTATTTGAGCGATGGGTCACGAAGGTCGTGAGA
AAATTGTAATACTGGTTGTAATTGACTGTGGATTCCCTGTGTTTCTTGCC
ATAAGCACAGACAACATTTCAGGTGATTTGCAACTTCCCTCCTATGCCGA
GACAGACAGTCATTCCATCTTTCATTTGATGGATGGGATTAGCTGCAGGC
ACCAATTCACCAGAAAAAAATGTGGATACTCTGTCGCATACGCGCTCGAT
CTCATCTAATAACATTCAATTTTACAGCATATTATTGGCTGCCTTTTTTT
AACGGGGTCATTTCACTACTTGATCGATCTCATCCCTTGAAAGAAGAGCT
TCACGTAATGCCAAGAGAGTACCGTTCGACAGCCTCCTGCGAAAGCTTTA
ATGAAGTGCGAACTACCTTCTCAGGATCGTTCGGAACGCCGAATATTGAC
CAAAAAAGTCCTTGGATTTTTTTAAAGTTCACAAATGAAATATACTGTTG
GAGGTTGAATGTGCTCAGGTGCACATGCCAATTTTCTGTTGCTCGCTCAA
TTTTGTGCGCTAAACGAACTCCCGCCAGTTTCGGTTTGATTATAAGTACC
AAGAATAGTAAGCTTCCTCCCGTCCGAATGGTTAACTCCTCTACGTCCCG
GACGGGATCAACTCAACCCGGCGTAACTCCTTAACCCCAACCCCAATCCA
ACTCACCCCGGGGTAAATCCCAGGTTGATGGAGGTGAGGCCAAGAGGAAC
CACCGCATCGTCCAAGACCACCGACAGGCTTAAAGTTGCATAGGTCTGGC
AAGTTTTGGCGAACCAGAAATCACTCAAGAAAGAGTAAGAAAACGACCGT
GCTATGACGGTTTGAGTGAGCCCTGTGGAGAAAGATTGCAGGGTTTGAGA
CGGGAGACAAGTCACTT
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Coding sequence (CDS) from alignment at H-paniculata_contig15178:2..5518-

>mRNA_H-paniculata_contig15178.3056.1 ID=mRNA_H-paniculata_contig15178.3056.1|Name=mRNA_H-paniculata_contig15178.3056.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1596bp|location=Sequence derived from alignment at H-paniculata_contig15178:2..5518- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCTATGCGGAGGAGATCGACGGATATCGTGCTAGGCACGTTGTTCAT
GGCTGGCTTGGCGGTTTCCCGCTCTTTTTGCTTTGTGCCGTCGATTGTTG
GCCGGGGTGGTCATGGGACTGAGCGGCTGTCATCTCATCCGACCACGCAA
GCGCAGTTCTCAGTATCCCAGATGTCTATGCGGAGGAGATCGACGGATAT
CGTGCTAGGCACGTTGTTCATGGCTGGCTTGGCGGTTTCCCGCTCTTTTT
GCTTTGTGCCGTCGATTGTTGGCCGGGGTGGTCATGGGACTGAGCGGCTG
TCATCTCATCCGACCACGCAAGCGCAGTTCTCAGTATCCCAGGGCTGGAC
GCGGACCGGAGGAAGCGTGACGATGTTGCAGGGCAAAAACCATAAGGGCA
GGCGAGGGCCAGGCCTTACAAACGTGCAGCGCGTGGTCAACCTGAGGGAA
CGCGAAGCCACCAGCGCGGAGCCCCAAAAGGGCTGGACGCGGACCGGAGG
AAGCGTGACGATGTTGCAGGGCAAAAACCATAAGGGCAGGCGAGGGCCAG
GCCTTACAAACGTGCAGCGCGTGGTCAACCTGAGGGAACGCGAAGCCACC
AGCGCGGAGCCCCAAAAGGTGATGATTTGCAACCTGGACTACAGCCTCGA
TGAGAAAGACATCGAGGAGTTCTGCAGCTCAGCGGGGATGGTGGTGGGTG
TCAAGCTCATCAGGAAGCGAAACGCTAAGACTTCCAAGGGGTGATGATTT
GCAACCTGGACTACAGCCTCGATGAGAAAGACATCGAGGAGTTCTGCAGC
TCAGCGGGGATGGTGGTGGGTGTCAAGCTCATCAGGAAGCGAAACGCTAA
GACTTCCAAGGGGTACGCTTTTGTGGACTACGATGCCGCCGTACAAGCCA
CCATCGCGATTGAGCAGCTCACGGGGGTCGAGCTCAAGGGGCGGCGAGTA
GAGGTGAAGCCGGCGGTCACGACACAAGAGCGGCTGAAAAAGGAGAAGTT
CGCTGTCTGGATGGACAAGCAAGGGAAGATGGAAGAGGAGAGGAGAGCCA
CGGAGGACGGCGTTGCGCTTGACGTCGAAGCTGAGGTTACCACTGAGCCG
GAGCCTGTAGAAACCGCCCAAGAGGTCGCTGAGGCGGAGCCGGTGCAAGC
TGCCGAAGAGGCCACGGAGGTACGCTTTTGTGGACTACGATGCCGCCGTA
CAAGCCACCATCGCGATTGAGCAGCTCACGGGGGTCGAGCTCAAGGGGCG
GCGAGTAGAGGTGAAGCCGGCGGTCACGACACAAGAGCGGCTGAAAAAGG
AGAAGTTCGCTGTCTGGATGGACAAGCAAGGGAAGATGGAAGAGGAGAGG
AGAGCCACGGAGGACGGCGTTGCGCTTGACGTCGAAGCTGAGGTTACCAC
TGAGCCGGAGCCTGTAGAAACCGCCCAAGAGGTCGCTGAGGCGGAGCCGG
TGCAAGCTGCCGAAGAGGCCACGGAGGTTGATGGAGGTGAGGCCAAGAGG
AACCACCGCATCGTCCAAGACCACCGACAGGCTTAAGTTGATGGAGGTGA
GGCCAAGAGGAACCACCGCATCGTCCAAGACCACCGACAGGCTTAA
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