mRNA_H-paniculata_contig1515.3045.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1515.3045.1
Unique NamemRNA_H-paniculata_contig1515.3045.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig1515.3045.1 vs. uniprot
Match: D7FRA6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRA6_ECTSI)

HSP 1 Score: 1199 bits (3103), Expect = 0.000e+0
Identity = 596/730 (81.64%), Postives = 657/730 (90.00%), Query Frame = 2
Query:   23 MAGFWKPGTSAPGVVERGD--DSLQVMDGRLAHLPLTAQRKALPIFRHRNSVLFALEKHRTVVIVGETGCGKTTQIPQYLHEEGWTAGNHEVVCTQPRRVAALTVASRVAEEMGSRLGDDVGYAVRFDARVGPRTKIKFCTDGMLLREMMLDPLLLTYSVVMLDEAHERTIYNDILFGLLKKIMRKRKDLRIIVASATLDAEQFRDFFETNRSKNATANTATILSIQGRQHPVDVLYMEKPASSYVQAAVDAALAVHSSEPIGDILIFLPGAEEIDAAVEMLRDHAPAAGGSNRWGT---STTRGANGEGGSLQVLPFYSALPVNMQMKVFEARRQGVRRVVVATNIAETSVTIDGIRYVIDSGVTRLPVYDPAQGFGSLVTALTSKASAKQRAGRAGRMAPGKCLRLMTEKHYHDLLPAQTIPEMQRSDLSWVVLLLKALGIDDVLHFEFLSPPSAETMIRALELLYALGALDDSCRLTEPLGMTMAEFPVEPCVAKFLISAWDFDCVEDALTVAAMLTVQNPFLHARKGGRERRERVREAMEEFAVIEGDHVTYLNVYNCFEGAGSDAEWCQDNCLNYRALVRAGEIRLQLARYCKRFAPPGKKPSSCGDDINALRRCLVAGFFANIAKLSPDGRYRTVRDGTVIAIHPSSVLAHFGSPPEWILFHEISKTSQLYARDVSVVDPRWLVELAPHFYEFRGTGVGGGAGSSKLGSKRRLGPERPTSNNLD 2197
            M+ FWKPGTS PG +ERGD  +SL ++D +L+ LPL  QR ALPI+RHRNSVLFA++KHR +V+VGETGCGKTTQIPQYLHE GWTAGN  VVCTQPRRVAA TVA+RVAEEMGSRLG+ VGY+VRFD+RVGP TK+KFCTDGMLLREMMLDPLL  YSVVMLDEAHERTIYNDILFGLLKKIMRKRK+LR+IVASATLDAEQFRDFFETN        TATILSIQGRQHPVDVLY EKP S+YV+AAVDAALAVHSSEP+GD+LIFLPGAEEIDAAVEMLRDHAP +  S +WG    ST +G  GEGG LQVLPFYSALP+N QMKVFE  RQGVRR+VVAT IAETSVTID IRYVID G  RLP YDPAQGFG+L+T LTSKASAKQRAGRAGR++PGKCLRLMTE+ YH  LPAQTIPEMQRSDLSWVVLLLKALGIDD+LHFEFLSPP+AETMIRALELLYALGALDDSCRLTEPLGMTMAEFPVEPC+AKFL SAWDF CVEDALTVAAML+VQNPF+H R GGRERRERVREAMEEFAV EGDH+TYLNV+N F+  G+D+EWC++NCLN+RALVRAGEIR QL+RYCK+FAPPG+  SSCGDD+NALRRCLVAGFFAN+AKLSPDGRYRTVRD TV+AIHPSSVLAHFGSPPEWILF+EISKTSQL+ARDVSVVDPRWL+ELAPHFYEFRG G  GGA   +LG+K+RLGPERPT++NL+
Sbjct:    1 MSVFWKPGTSGPGGLERGDGSESLHIVDPKLSKLPLQTQRHALPIYRHRNSVLFAVQKHRAIVLVGETGCGKTTQIPQYLHEAGWTAGNRAVVCTQPRRVAAFTVATRVAEEMGSRLGETVGYSVRFDSRVGPATKVKFCTDGMLLREMMLDPLLTAYSVVMLDEAHERTIYNDILFGLLKKIMRKRKELRVIVASATLDAEQFRDFFETNTXXXXXXXTATILSIQGRQHPVDVLYTEKPVSNYVRAAVDAALAVHSSEPVGDVLIFLPGAEEIDAAVEMLRDHAPQSATSGKWGGWGGSTAKGV-GEGGPLQVLPFYSALPINTQMKVFEPTRQGVRRIVVATTIAETSVTIDRIRYVIDPGFIRLPFYDPAQGFGALLTTLTSKASAKQRAGRAGRVSPGKCLRLMTEEDYHAQLPAQTIPEMQRSDLSWVVLLLKALGIDDILHFEFLSPPAAETMIRALELLYALGALDDSCRLTEPLGMTMAEFPVEPCLAKFLASAWDFGCVEDALTVAAMLSVQNPFVHPRGGGRERRERVREAMEEFAVTEGDHITYLNVFNSFDETGNDSEWCKENCLNHRALVRAGEIRQQLSRYCKKFAPPGQHVSSCGDDVNALRRCLVAGFFANVAKLSPDGRYRTVRDSTVVAIHPSSVLAHFGSPPEWILFNEISKTSQLFARDVSVVDPRWLIELAPHFYEFRGAGGSGGA--PRLGTKKRLGPERPTAHNLE 727          
BLAST of mRNA_H-paniculata_contig1515.3045.1 vs. uniprot
Match: A0A835Z495_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z495_9STRA)

HSP 1 Score: 801 bits (2068), Expect = 6.720e-280
Identity = 415/717 (57.88%), Postives = 519/717 (72.38%), Query Frame = 2
Query:   32 FWKPGTSAPGVV-ERGDDSLQ--VMDGRLAHLPLTAQRKALPIFRHRNSVLFALEKHRTVVIVGETGCGKTTQIPQYLHEEGWTAGNHEVVCTQPRRVAALTVASRVAEEMGSRLGDDVGYAVRFDARVGP---RTKIKFCTDGMLLREMMLDPLLLTYSVVMLDEAHERTIYNDILFGLLKKIMRKRKDLRIIVASATLDAEQFRDFFETNRSKNATANTATILSIQGRQHPVDVLYMEKPASSYVQAAVDAALAVHSSEPIGDILIFLPGAEEIDAAVEMLRDHAPAAGGSNRWGTSTTRGANGEGGSLQVLPFYSALPVNMQMKVFEARRQGVRRVVVATNIAETSVTIDGIRYVIDSGVTRLPVYDPAQGFGSLVTALTSKASAKQRAGRAGRMAPGKCLRLMTEKHYHDLLPAQTIPEMQRSDLSWVVLLLKALGIDDVLHFEFLSPPSAETMIRALELLYALGALDDSCRLTEPLGMTMAEFPVEPCVAKFLISAWDFDCVEDALTVAAMLTVQNPFLHARKGGRERRERVREAMEEFAVIEGDHVTYLNVYN--CFEGAGSDA----EWCQDNCLNYRALVRAGEIRLQLARYCKRFAPPGKKPS------------SCGDDINALRRCLVAGFFANIAKLSPDGRYRTVRDGTVIAIHPSSVLAHFGSPPEWILFHEISKTSQLYARDVSVVDPRWLVELAPHFYEFRG 2110
            FWKPGT+ PG V ERG D+    ++D +L+HLPL+ QR+ALPI+++  S+L+ALE HRT+VIVGETG GKTTQ+PQYLH+ GWTAG   VVCTQPRRVAA+TVA+RVA+EM         YAVRFD +      RT +KF TDG+L+REMMLDPLL  YSVVMLDEAHERT++NDILFGLLKK+MR+R DLR+IVASATLDAE+FRDFFET   K     TATILS+QGRQHPVD+LY+E PA +YV+AA +AAL++H +EP GDILIF+PGAEEID                                              +QM VFE  + G+R+V+VATN+AETS+T+DG++YV+D    RLP YDPA G  SLVT +TSKASA QRAGRAGR +PGKCLRL+TE  ++ LLPA+T PE+QR+DLS  +LLLKALG+ D++ F+FLSPP+AE + RALELLY+LGA+DDS  +T PLG +MAE P+ P +AK L+++W F CV +ALTVAAML+V+ PF   R  G E ++R R AM  FA +EGDH+TY+NVYN  C E  G       EWC ++CL+ R+L RA EIR QL RY +  APP                 S G D+ A+ RCLV+GFF+N A+LS DGRYRTVR+GTV+  HPSSVLA FGSPPE++++HE+ +T+QL+ARDVS VDPRWL+ELAPHF+  RG
Sbjct:    3 FWKPGTAGPGFVQERGGDAEAPVLVDPKLSHLPLSKQRQALPIYQYHRSLLYALETHRTLVIVGETGSGKTTQVPQYLHQAGWTAGGRAVVCTQPRRVAAVTVAARVAQEMXXXXXXXXXYAVRFDEKCSKEVGRTALKFVTDGLLIREMMLDPLLSRYSVVMLDEAHERTVHNDILFGLLKKVMRQRSDLRLIVASATLDAEEFRDFFET-ADKEGDKLTATILSVQGRQHPVDILYLEAPADNYVRAAAEAALSIHETEPPGDILIFMPGAEEIDT---------------------------------------------VQMAVFEPAKPGIRKVIVATNVAETSITLDGVKYVVDPCFVRLPFYDPATGVESLVTTVTSKASATQRAGRAGRTSPGKCLRLVTETDFNSLLPARTPPEVQRTDLSGTLLLLKALGLHDIVRFDFLSPPTAEALARALELLYSLGAIDDSADITRPLGASMAELPLSPQLAKVLVASWRFGCVAEALTVAAMLSVRGPFERPRGVGAEAKQRQRSAMAAFATLEGDHITYINVYNAYCDEADGGSVDELREWCAEHCLDARSLRRAREIRGQLERYARLHAPPDHDNDLPVSKQQLRGLPSAGSDMKAVLRCLVSGFFSNAARLSSDGRYRTVREGTVLTFHPSSVLAQFGSPPEYVVYHEVVRTTQLFARDVSAVDPRWLLELAPHFFATRG 673          
BLAST of mRNA_H-paniculata_contig1515.3045.1 vs. uniprot
Match: W7TSM4_9STRA (Deah (Asp-glu-ala-his) box polypeptide 35 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSM4_9STRA)

HSP 1 Score: 721 bits (1860), Expect = 5.640e-248
Identity = 386/721 (53.54%), Postives = 507/721 (70.32%), Query Frame = 2
Query:   32 FWKPGTSAPGV-VER--GDDSLQVMD--GRLAH--LPLTAQRKALPIFRHRNSVLFALEKHRTVVIVGETGCGKTTQIPQYLHEEGWTAGNHEVVCTQPRRVAALTVASRVAEEMGSRLGDDVGYAVRFDARV---GPRTKIKFCTDGMLLREMMLDPLLLTYSVVMLDEAHERTIYNDILFGLLKKIMRKRKDLRIIVASATLDAEQFRDFFETNRSKNATA-------NTATILSIQGRQHPVDVLYMEKPASSYVQAAVDAALAVHSSEPIGDILIFLPGAEEIDAAVEMLRDHAPAAGGSNRWGTSTTRGANGEGGSLQVLPFYSALPVNMQMKVFEARRQGV-RRVVVATNIAETSVTIDGIRYVIDSGVTRLPVYDPAQGFGSLVTALTSKASAKQRAGRAGRMAPGKCLRLMTEKHYHDLLPAQTIPEMQRSDLSWVVLLLKALGIDDVLHFEFLSPPSAETMIRALELLYALGALDDSCRLTEPLGMTMAEFPVEPCVAKFLISAWDFDCVEDALTVAAMLTVQNPFLHARKGGRERRERVREAMEEFAVIEGDHVTYLNVYNCFEGAGSDAEWCQDNCLNYRALVRAGEIRLQLARYCKRFAPPGKKPSSCGDDINALRRCLVAGFFANIAKLSPDGRYRTVRDGTVIAIHPSSVLAHFGSPPEWILFHEISKTSQLYARDVSVVDPRWLVELAPHFYEFRGTGVGGGAGSS 2140
            FWKPGT+AP + +ER  G    +  D  G   H  LP   Q+  LPI R R ++L+ALE+++TVV+VGETG GK+TQ+PQYLHE GWT G+  V+CTQPRRVAA+TVA+RVAEEMG +LG  VGYAVRFD+RV   G RT+IKF TDG+LLRE + DPLL  YSV++LDEAHER++Y D+L GLLKK+ ++R +LRI+++SAT DAE FRDFFET   K  ++       + +TI+SI GRQH VDV Y+ K   +Y+++AVD  L++  SE  GD+L+FLPG EEID AV  +++H  A GG                  + VLP +S+LP ++QMK  +   + V R+V+ ATNIAETS+TI+GIR+++D G  +LPVYD   GF SLVT   S+ASA QRAGRAGR  PGKC RL TE+ +   L A T PE+QRS+L+W++L LKALGID V+ F+F++ PSAE ++R LELLYALGALDD CRLT  LG  MAEFPVEP +AK L++++DF C E+ALT+ A+L VQN + + +  GRE R     AM E A  +GDH+T L +Y  +E AG   EWC ++ LN R+L RA EIR QL RY +R+ P G   +SC DD  ALRRC++ GFF N A+L  DGRY TVRDG  +A+H +SVLA +G+P EWI+++++  TS+ + RD S + P WL+ELAPHFY +     GGG G+S
Sbjct:    3 FWKPGTAAPQLGLERPTGLSETEAGDTIGYNPHYRLPFKQQKLLLPIARARENILYALERYKTVVLVGETGSGKSTQVPQYLHESGWTQGDRVVLCTQPRRVAAITVAARVAEEMGCKLGGIVGYAVRFDSRVDEGGSRTRIKFVTDGLLLRETLYDPLLSAYSVIILDEAHERSMYTDVLLGLLKKVRKRRPELRIMISSATADAETFRDFFETFTYKGVSSEQSEGSNHDSTIVSITGRQHAVDVFYLSKAPRNYLRSAVDTVLSIIESEGRGDVLVFLPGMEEIDEAVVTVKEHLNALGGMEN--------------VVLVLPLHSSLPHHLQMKALQPPSRHVERKVIFATNIAETSLTIEGIRFIVDCGFVKLPVYDVRTGFESLVTTSVSRASATQRAGRAGRTGPGKCFRLYTEEAF-STLSAHTTPEVQRSNLAWMILQLKALGIDQVMTFDFIAQPSAEALMRGLELLYALGALDDRCRLTPDLGEKMAEFPVEPRLAKLLLASFDFHCTEEALTLVALLQVQNVWTNPK--GRESRTIQEAAMAELASRDGDHLTLLAIYREWEEAGRSTEWCSEHFLNPRSLTRAREIRGQLRRYLERYKPKGSVFASCVDDSEALRRCVLTGFFFNAARLKSDGRYYTVRDGHPVALHSTSVLAKYGAPAEWIVYNDVVITSEPFLRDCSRIQPLWLMELAPHFYAY-----GGGKGTS 701          
BLAST of mRNA_H-paniculata_contig1515.3045.1 vs. uniprot
Match: A0A7S2W5S5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W5S5_9STRA)

HSP 1 Score: 720 bits (1858), Expect = 6.500e-245
Identity = 390/775 (50.32%), Postives = 503/775 (64.90%), Query Frame = 2
Query:   32 FWKPGTSAPGVVERGDDSLQVMDGRLAHLPLTAQRKALPIFRHRNSVLFALEKHRTVVIVGETGCGKTTQIPQYLHEEGWTAGNHEVVCTQPRRVAALTVASRVAEEMGSRLGDDVGYAVRFDARVGPRTKIKFCTDGMLLREMMLDPLLLTYSVVMLDEAHERTIYNDILFGLLKKIMRKRKDLRIIVASATLDAEQFRDFFETNRSKNA---------------------------------------TAN---------------------------------TATILSIQGRQHPVDVLYMEKPASSYVQAAVDAALAVHSSEPIGDILIFLPGAEEIDAAVEMLRDHAPAAGGSNRWGTSTTRGANGEGGSLQVLPFYSALPVNMQMKVFEARRQ-GVRRVVVATNIAETSVTIDGIRYVIDSGVTRLPVYDPAQGFGSLVTALTSKASAKQRAGRAGRMAPGKCLRLMTEKHYHD--LLPAQTIPEMQRSDLSWVVLLLKALGIDDVLHFEFLSPPSAETMIRALELLYALGALDDSCRLTEPLGMTMAEFPVEPCVAKFLISAWDFDCVEDALTVAAMLTVQNPFLHARKGGRERRERVREAMEEFAVIEGDHVTYLNVYNCFEGAG-----SDAEWCQDNCLNYRALVRAGEIRLQLARYCKRFAPP-----GKKPSSCGDDINALRRCLVAGFFANIAKLSPDGRYRTVRDGTVIAIHPSSVLAHFGSPPEWILFHEISKTSQLYARDVSVVDPRWLVELAPHFYE 2101
             W+PG   P      +    V   +  +LPL+ QR+ LPI R+R+S+L+ALE++RTVV+VGETGCGKTTQ+PQYLHE GWTAG   VVCTQPRRVAA+TVA RVA+EMG  LG  VGYAVRFD R G  T IKFCTDG+L+RE + DPLL   SVV++DEAHER+++ D+L GLLKK+ R+RKDLRIIVASATLDAE+FRDFFE    K A                                       TA                                  TATI+S+ GR HPV+V +  KP   Y+ AAVD  +A+H  E  GDIL+FLPG +E+DAAV M++D                   + +  +L VLP Y+ALP + QM+VF+  RQ G+R+VV AT IAETSVTIDGI +V+D+G  +LP ++P+ G  SL+TA  S+ASA QRAGRAGR  PGKC RL TE  + +  ++PA T PEMQR  L+W VL LKALGIDDVLHF+F+SPPSAETM+ ALE+LY+LGALDD CR+T P+G+ +AEFP+EP +AK L+S+WDF C E+ + VAAML+V   ++H R G R +R+++  AM EFAV EGDHVT LNV+  FE        S  EWC +N LN+RAL RA E+  QL  Y  R A        +  +SCGDD  A+ +C+++GFFAN+A+L PDG YRT+R    + ++P+S+LA +G+PPE+++F +    SQ + R  S + PRWL+ELAPHFYE
Sbjct:    1 MWRPGDDGPD--REAEFGTLVYANKHRNLPLSRQRQLLPIARYRDSLLYALEEYRTVVVVGETGCGKTTQLPQYLHEAGWTAGGRRVVCTQPRRVAAVTVAQRVADEMGRELGGTVGYAVRFDDRTGEDTAIKFCTDGLLIREALRDPLLSRVSVVIVDEAHERSLHTDVLLGLLKKVQRRRKDLRIIVASATLDAEKFRDFFEAAGRKKAKKGKATDAGGERTSAKEGGEARKGGPSTSGAHTSDPAPETARHRALAALDAAMGSTGASRGPEKSEEPEASEEKPTATIVSVSGRTHPVEVCFAAKPQKDYIAAAVDTVVAIHRQEGEGDILVFLPGMQEVDAAVRMIKD------------------TDVDSRTLWVLPLYAALPSHEQMRVFDRSRQRGMRKVVCATTIAETSVTIDGICFVVDAGFHKLPYFNPSTGIESLLTAPISRASAVQRAGRAGRTQPGKCFRLYTEAAFQNETVMPAATPPEMQRVSLTWAVLQLKALGIDDVLHFDFVSPPSAETMLHALEMLYSLGALDDHCRITSPVGVQLAEFPLEPRLAKALLSSWDFGCGEEMIVVAAMLSVGEVWIHPR-GSRGQRDKLDVAMAEFAVGEGDHVTLLNVFRGFEDEPEGNNQSPQEWCAENMLNHRALKRAKEVHRQLKGYLLRTARELHSGESRPLASCGDDTTAILKCIISGFFANVARLGPDGLYRTIRGSRRVQLYPNSILAKYGAPPEFVVFDQYLSLSQDFLRGCSKIHPRWLLELAPHFYE 754          
BLAST of mRNA_H-paniculata_contig1515.3045.1 vs. uniprot
Match: A0A0L0HH03_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HH03_SPIPD)

HSP 1 Score: 689 bits (1778), Expect = 5.200e-236
Identity = 359/701 (51.21%), Postives = 479/701 (68.33%), Query Frame = 2
Query:   32 FWKPGTSAPG------VVERGDDSLQVMDGRLAHLPLTAQRKALPIFRHRNSVLFALEKHRTVVIVGETGCGKTTQIPQYLHEEGWTAGNHEVVCTQPRRVAALTVASRVAEEMGSRLGDDVGYAVRFD-ARVGPRTKIKFCTDGMLLREMMLDPLLLTYSVVMLDEAHERTIYNDILFGLLKKIMRKRKDLRIIVASATLDAEQFRDFFETNRSKNATANTATILSIQGRQHPVDVLYMEKPASSYVQAAVDAALAVHSSEPIGDILIFLPGAEEIDAAVEMLRDHAPAAGGSNRWGTSTTRGANGEGGSLQVLPFYSALPVNMQMKVFEARRQGVRRVVVATNIAETSVTIDGIRYVIDSGVTRLPVYDPAQGFGSLVTALTSKASAKQRAGRAGRMAPGKCLRLMTEKHYHDLLPAQTIPEMQRSDLSWVVLLLKALGIDDVLHFEFLSPPSAETMIRALELLYALGALDDSCRLTEPLGMTMAEFPVEPCVAKFLISAWDFDCVEDALTVAAMLTVQNPFLHARKGGRERRERVREAMEEFAVIEGDHVTYLNVYNCFEGAGSDAEWCQDNCLNYRALVRAGEIRLQLARYCKRFAPPGKKPSSCGDDINALRRCLVAGFFANIAKLSPDGRYRTVRDGTVIAIHPSSVLAHFGSPPEWILFHEISKTSQLYARDVSVVDPRWLVELAPHFYEFRGT 2113
            FWKPGT APG           D+S+         L ++ QR  LPI+++RN +L+ LE ++ VVIVG+TG GKTTQ+PQYLHE GWTA  H V CTQPRRVAA +VA+RVAEEMG +LG +VGY +RFD       T+IK+ TDGML RE +LDPLL  YS +M+DEAHERT++ DIL G+LKKI++KR DLR+I++SATLDAE F +FF +N S + + +TA I+S++GR  PVD+LY+E+P + Y+ A+V+  + +H  EP GDIL+FL G EEID AV ++ + A        +  S+ R        L  LP Y  L  + Q+KVFE   +G R+VVVATNIAE S+TI GI YV+D+G  +L  Y+P     SL+ +  SKASA+QRAGRAGR  PGK  RL TEK + D LP   +PEMQRS+L+ VVL LKALGI++VL+F+FLSPP    M +ALELLY+L ALDD  RLT P G+ +AEFPV+P +A  L+++    C ++ LT+AAML+VQN F+      RE  +  R    +FAV EGDH+TYLNVYN F      A+WC ++ LN++ L+R   IR QL RY  RF  P +   SC  DI+ LR+C+V+G+F++ A+L PDG Y TV    V+ IHP+SVL  F   PEW+++HE+ +T++ + RD++V++P WL ELAPHFYE R T
Sbjct:    3 FWKPGTVAPGSSIDRETERETDESVVAQYNANEGLAISQQRLRLPIYKNRNHILYLLENYQVVVIVGQTGSGKTTQLPQYLHEAGWTANGHVVACTQPRRVAATSVAARVAEEMGVQLGQEVGYTIRFDDCSDSTLTRIKYMTDGMLFRETLLDPLLTRYSAIMIDEAHERTLHTDILVGVLKKILKKRPDLRVIISSATLDAEAFYNFFNSNTSNDKSKDTAVIMSLEGRMFPVDILYLEQPCNDYITASVETVMKIHEKEPPGDILLFLTGREEIDTAVSLITERAIL------YERSSMR--------LSALPIYGGLTFDEQLKVFEPAPRGTRKVVVATNIAEASITIQGIVYVVDAGFVKLRAYNPRTDMESLIVSHISKASAQQRAGRAGRTRPGKAFRLYTEKAF-DALPDNNVPEMQRSNLATVVLQLKALGIENVLYFDFLSPPPVSNMTKALELLYSLKALDDYGRLTMPFGVHLAEFPVDPLLAAMLMNSLSMKCADEILTIAAMLSVQNVFISPSGQRREAEDEKR----KFAVEEGDHITYLNVYNAFLKNNKSAKWCYNHFLNHKTLLRVVSIRQQLRRYLGRFGMPFE---SCKGDIDILRKCIVSGYFSHAARLKPDGTYGTVLHNEVLHIHPNSVL--FRRSPEWVVYHEVVETTKSFMRDLTVIEPDWLTELAPHFYERRAT 679          
BLAST of mRNA_H-paniculata_contig1515.3045.1 vs. uniprot
Match: A0A7K4K190_9AVES (RNA helicase (Fragment) n=1 Tax=Crypturellus soui TaxID=458187 RepID=A0A7K4K190_9AVES)

HSP 1 Score: 681 bits (1756), Expect = 2.220e-232
Identity = 365/700 (52.14%), Postives = 477/700 (68.14%), Query Frame = 2
Query:   32 FWKPGTSAPGVV---ERGDDS----LQVMDGRLAHLPLTAQRKALPIFRHRNSVLFALEKHRTVVIVGETGCGKTTQIPQYLHEEGWTAGNHEVVCTQPRRVAALTVASRVAEEMGSRLGDDVGYAVRFDARVGPR-TKIKFCTDGMLLREMMLDPLLLTYSVVMLDEAHERTIYNDILFGLLKKIMRKRKDLRIIVASATLDAEQFRDFFETNRSKNATANTATILSIQGRQHPVDVLYMEKPASSYVQAAVDAALAVHSSEPIGDILIFLPGAEEIDAAVEMLRDHAPAAGGSNRWGTSTTRGANGEGGSLQVLPFYSALPVNMQMKVFEARRQGVRRVVVATNIAETSVTIDGIRYVIDSGVTRLPVYDPAQGFGSLVTALTSKASAKQRAGRAGRMAPGKCLRLMTEKHYHDLLPAQTIPEMQRSDLSWVVLLLKALGIDDVLHFEFLSPPSAETMIRALELLYALGALDDSCRLTEPLGMTMAEFPVEPCVAKFLISAWDFDCVEDALTVAAMLTVQNPFLHA--RKGGRERRERVREAMEEFAVIEGDHVTYLNVYNCFEGAGSDAEWCQDNCLNYRALVRAGEIRLQLARYCKRFAPPGKKPSSCGDDINALRRCLVAGFFANIAKLSPDGRYRTVRDGTVIAIHPSSVLAHFGSPPEWILFHEISKTSQLYARDVSVVDPRWLVELAPHFYE 2101
            FW+PGT  PGV    ER   +    + +     A L +  QR+ LP+F+ RN +L+ +E ++T+VIVGETGCGK+TQIPQYL E GWTA    V  TQPRRVAA+TVA RVA+E G+ LG +VGY +RFD    PR T+IKF TDGML+REMM DPLL  YSV+MLDEAHERT+Y DI  GLLKKI +KR DLR+IVASATLDAE+FRDFF  N + + + +T+ IL+++GR  PVD+ Y++ P   Y+Q+AV+  + +H +E  GDIL+FL G EE++  V ML +HA A   S            G    L++LP Y+ LP   QMKVFE   + VR+V+VATNIAETS+T+ GI +VID G  +L  Y+P      LV    SKASA QRAGRAGR   GKC RL TE+ + + LP  T+PEMQRS+L+ V+L LKALGID+VL F FLSPP A++M++ALELLYALG LD +CRLTEPLGM +AEFP+ P  AK L+ + +F C E+ LT+AAM+ +QN F+    +K    R+ R      +FAV EGDH+T LNVY  F      ++WCQ++ LNY+ LVRA  +R QL +   RF  P    SS GD    LR C+V+GFFAN AKL   G YRT+RD   + IHP+SVL +   PP W++++E+ +T++ Y RDV+ ++  WL+ELAPHFY+
Sbjct:   10 FWRPGTEGPGVSISEERQSPAESSGVNIFYNPYASLSIEQQRQKLPVFKLRNHILYLVENYQTLVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPRATRIKFLTDGMLVREMMADPLLTKYSVLMLDEAHERTLYTDISIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNETNDPSKDTSVILTVEGRTFPVDIFYIQSPVPDYIQSAVETVMKIHQTENDGDILVFLTGQEEVETVVSMLIEHARALSRS------------GMKKHLRILPMYAGLPSVEQMKVFERVSRSVRKVIVATNIAETSITVHGIGFVIDCGFVKLRAYNPKTAIECLVVVPVSKASANQRAGRAGRNRSGKCYRLYTEEDF-EKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFSFLSPPPAQSMVQALELLYALGGLDMNCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSEEILTIAAMMQIQNIFVIPPNQKSQAARQHR------KFAVEEGDHLTMLNVYEAFIKHSKSSQWCQEHFLNYKGLVRASVVREQLKKLLIRFKVPNT--SSEGDPDTVLR-CIVSGFFANAAKLHSTGVYRTIRDDHELHIHPTSVL-YTEKPPRWVIYNEVIQTAKYYMRDVTAIESAWLLELAPHFYQ 686          
BLAST of mRNA_H-paniculata_contig1515.3045.1 vs. uniprot
Match: A0A6P8I280_ACTTE (probable ATP-dependent RNA helicase DHX35 isoform X1 n=3 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I280_ACTTE)

HSP 1 Score: 680 bits (1755), Expect = 2.740e-232
Identity = 357/700 (51.00%), Postives = 478/700 (68.29%), Query Frame = 2
Query:   32 FWKPGTSAPG---VVERGDDS---LQVMDGRLAHLPLTAQRKALPIFRHRNSVLFALEKHRTVVIVGETGCGKTTQIPQYLHEEGWTAGNHEVVCTQPRRVAALTVASRVAEEMGSRLGDDVGYAVRFDARVGPRTK-IKFCTDGMLLREMMLDPLLLTYSVVMLDEAHERTIYNDILFGLLKKIMRKRKDLRIIVASATLDAEQFRDFFETNRSKNATANTATILSIQGRQHPVDVLYMEKPASSYVQAAVDAALAVHSSEPIGDILIFLPGAEEIDAAVEMLRDHAPAAGGSNRWGTSTTRGANGEGGSLQVLPFYSALPVNMQMKVFEARRQGVRRVVVATNIAETSVTIDGIRYVIDSGVTRLPVYDPAQGFGSLVTALTSKASAKQRAGRAGRMAPGKCLRLMTEKHYHDLLPAQTIPEMQRSDLSWVVLLLKALGIDDVLHFEFLSPPSAETMIRALELLYALGALDDSCRLTEPLGMTMAEFPVEPCVAKFLISAWDFDCVEDALTVAAMLTVQNPFLHA--RKGGRERRERVREAMEEFAVIEGDHVTYLNVYNCFEGAGSDAEWCQDNCLNYRALVRAGEIRLQLARYCKRFAPPGKKPSSCGDDINALRRCLVAGFFANIAKLSPDGRYRTVRDGTVIAIHPSSVLAHFGSPPEWILFHEISKTSQLYARDVSVVDPRWLVELAPHFYEF 2104
            FWKPG+  PG     ER ++       +    A L +T QR+ LPIF+H+ ++L+ LEK+ TV+IVGETGCGK+TQIPQYL E GWTA   ++  TQPRRVAA+TVA RVAEE  S +G +VGY VRFD    P T  IK+ TDG+LLRE+M DPLL  YSV+M+DEAHERT+Y DI+ GLLKKI +KRKDL+IIV+SATLDAE F+ +F TN + + + +TA +LS++GR +PVD+ Y   P   YV+A VD  + +H  +  GDIL+FL G +E+++AVE L + A A    +R+              L+VLP YS LP + QM VF+   Q  R+VVVATNIAE S+TIDG+ YVID G  ++  Y P  G  SL+    S+ASA+QRAGRAGR+  GK  RL TEK +H L    TIPEMQRS+L+ V+L LK++GID+VL F+F S P A++MIR LELLYA+ ALDD+ +L EPLG++MAEFP+EP +AK L+ +  F+C ++ LT+AAML + + F+    +K   ER      A  +FAV EGDH+TYLNVY  F      + WCQ+N +NY+ L  A +IR QL +    F  P     +C  D++ + +C+V+GFFAN A+L P G YRT+RDG  + IHP+SVL +   PPEW+++HEI +TS+ Y RDV+ ++P WL ELAPH+YE+
Sbjct:    9 FWKPGSEGPGSSIAEERANNEEAGASTVYNPNASLSITLQRQRLPIFKHKTNILYLLEKYETVIIVGETGCGKSTQIPQYLFENGWTADGKKIGITQPRRVAAVTVAMRVAEERSSFIGQEVGYCVRFDNCYDPHTTMIKYMTDGILLREIMGDPLLTKYSVIMIDEAHERTLYTDIILGLLKKIKKKRKDLKIIVSSATLDAEMFKKYFNTNITSDKSKDTAAVLSVEGRSYPVDIHYTLSPVPDYVKATVDTVMGIHLEQGPGDILVFLTGQDEVESAVEKLIERARAMPKGSRY--------------LKVLPMYSGLPHSEQMLVFKRAPQNTRKVVVATNIAEASITIDGVAYVIDCGFVKMRAYSPKTGVESLIVTQVSQASAEQRAGRAGRVRAGKAYRLYTEKDFHQLASG-TIPEMQRSNLAPVLLQLKSMGIDNVLRFDFPSKPPAQSMIRGLELLYAIDALDDNGKLVEPLGVSMAEFPLEPMIAKMLLCSGKFECSKEILTIAAMLQIHHVFVSPSNQKAAAER------ARRKFAVYEGDHLTYLNVYQAFVKHKQSSRWCQENFVNYKGLKHAVKIREQLKKLLLHFNVP---ILTCDGDVDPVCQCIVSGFFANAARLHPSGSYRTIRDGHPLHIHPNSVL-YAEQPPEWVIYHEILQTSKYYMRDVTKIEPSWLYELAPHYYEY 683          
BLAST of mRNA_H-paniculata_contig1515.3045.1 vs. uniprot
Match: A0A7K7VGR2_EUDEL (RNA helicase (Fragment) n=8 Tax=Aves TaxID=8782 RepID=A0A7K7VGR2_EUDEL)

HSP 1 Score: 680 bits (1754), Expect = 2.750e-232
Identity = 363/700 (51.86%), Postives = 473/700 (67.57%), Query Frame = 2
Query:   32 FWKPGTSAPGV-------VERGDDSLQVMDGRLAHLPLTAQRKALPIFRHRNSVLFALEKHRTVVIVGETGCGKTTQIPQYLHEEGWTAGNHEVVCTQPRRVAALTVASRVAEEMGSRLGDDVGYAVRFDARVGPR-TKIKFCTDGMLLREMMLDPLLLTYSVVMLDEAHERTIYNDILFGLLKKIMRKRKDLRIIVASATLDAEQFRDFFETNRSKNATANTATILSIQGRQHPVDVLYMEKPASSYVQAAVDAALAVHSSEPIGDILIFLPGAEEIDAAVEMLRDHAPAAGGSNRWGTSTTRGANGEGGSLQVLPFYSALPVNMQMKVFEARRQGVRRVVVATNIAETSVTIDGIRYVIDSGVTRLPVYDPAQGFGSLVTALTSKASAKQRAGRAGRMAPGKCLRLMTEKHYHDLLPAQTIPEMQRSDLSWVVLLLKALGIDDVLHFEFLSPPSAETMIRALELLYALGALDDSCRLTEPLGMTMAEFPVEPCVAKFLISAWDFDCVEDALTVAAMLTVQNPFLHA--RKGGRERRERVREAMEEFAVIEGDHVTYLNVYNCFEGAGSDAEWCQDNCLNYRALVRAGEIRLQLARYCKRFAPPGKKPSSCGDDINALRRCLVAGFFANIAKLSPDGRYRTVRDGTVIAIHPSSVLAHFGSPPEWILFHEISKTSQLYARDVSVVDPRWLVELAPHFYE 2101
            FW+PGT  PGV              + V     A L +  QR+ LP+F+ RN +L+ +E ++T+VIVGETGCGK+TQIPQYL E GWTA    V  TQPRRVAA++VA RVA+E G+ LG +VGY +RFD    PR T+IKF TDGML+REMM DPLL  YSV+MLDEAHERT+Y DI  GLLKKI +KR DLR+IVASATLDAE+FRDFF  N + + + +T+ IL+++GR  PVD+ Y++ P   Y+Q+ V+ A+ +H +E  GDILIFL G EE++  V ML + A A    +R G             L+VLP Y+ LP   QMKVFE   + VR+V+VATNIAETS+T+ G+ +VID G  +L  Y+P      LV    S+ASA QRAGRAGR   GKC RL TE+ + + LP  T+PEMQRS+L+ V+L LKALGID+VL F FLSPP A++M++ALELLYALG LD  CRLTEPLGM +AEFP+ P  AK L+ + +F C E+ LT+AAM+ +QN F+    +K    RR R      +FAV EGDH+T LNVY  F      ++WCQ++ LNY+ LVRA  +R QL +   RF  P    +S   D + + RC+V+GFFAN AKL   G YRT+RD   + IHP+SVL +   PP W++++EI +TS+ Y RDV+ ++  WLVELAPHFY+
Sbjct:   10 FWRPGTEGPGVSVSEERQTPAESSGVTVFYNPYASLSIEQQRQKLPVFKLRNHILYLVESYQTLVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVSVAGRVADERGAVLGHEVGYCIRFDDCTDPRATRIKFLTDGMLVREMMSDPLLTKYSVLMLDEAHERTLYTDISIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNETNDPSKDTSVILTVEGRTFPVDIFYIQSPVPDYIQSTVETAMKIHQTENDGDILIFLTGQEEVETVVSMLIEQARAL---SRTGMRK---------HLRVLPMYAGLPTVEQMKVFERVSRSVRKVIVATNIAETSITVHGVAFVIDCGFVKLRAYNPKTAIECLVVVPVSQASANQRAGRAGRNRSGKCYRLYTEEDF-EKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFPFLSPPPAQSMVQALELLYALGGLDTHCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSEEILTIAAMMQIQNIFVIPPNQKSQAARRHR------KFAVEEGDHLTMLNVYEAFVKHSKSSQWCQEHFLNYKGLVRASVVREQLKKLLVRFKVPN---TSSEGDPDTILRCIVSGFFANAAKLHSTGVYRTIRDDHELHIHPTSVL-YTEKPPRWVVYNEIIQTSKYYMRDVTAIESAWLVELAPHFYQ 686          
BLAST of mRNA_H-paniculata_contig1515.3045.1 vs. uniprot
Match: UPI001CFAAF67 (probable ATP-dependent RNA helicase DHX35 n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFAAF67)

HSP 1 Score: 680 bits (1755), Expect = 2.930e-232
Identity = 367/698 (52.58%), Postives = 474/698 (67.91%), Query Frame = 2
Query:   32 FWKPGTSAPG--VVERGDDSLQVMDGRLAHLPLTA-----QRKALPIFRHRNSVLFALEKHRTVVIVGETGCGKTTQIPQYLHEEGWTAGNHEVVCTQPRRVAALTVASRVAEEMGSRLGDDVGYAVRFDARVGPR-TKIKFCTDGMLLREMMLDPLLLTYSVVMLDEAHERTIYNDILFGLLKKIMRKRKDLRIIVASATLDAEQFRDFFETNRSKNATANTATILSIQGRQHPVDVLYMEKPASSYVQAAVDAALAVHSSEPIGDILIFLPGAEEIDAAVEMLRDHAPAAGGSNRWGTSTTRGANGEGGSLQVLPFYSALPVNMQMKVFEARRQGVRRVVVATNIAETSVTIDGIRYVIDSGVTRLPVYDPAQGFGSLVTALTSKASAKQRAGRAGRMAPGKCLRLMTEKHYHDLLPAQTIPEMQRSDLSWVVLLLKALGIDDVLHFEFLSPPSAETMIRALELLYALGALDDSCRLTEPLGMTMAEFPVEPCVAKFLISAWDFDCVEDALTVAAMLTVQNPFLHARKGGRERRERVREAMEEFAVIEGDHVTYLNVYNCFEGAGSDAEWCQDNCLNYRALVRAGEIRLQLARYCKRFAPPGKKPSSCGDDINALRRCLVAGFFANIAKLSPDGRYRTVRDGTVIAIHPSSVLAHFGSPPEWILFHEISKTSQLYARDVSVVDPRWLVELAPHFYE 2101
            FWKPGT  PG  + E    + +     + + P T+     QR+ LPIF+HRN +L+ +E ++TVVIVGETGCGK+TQIPQYL E GWTA    V  TQPRRVAA++VA RVAEE G+ LG +VGY +RFD     + T+IKF TDGML+REMM DPLL  YSV+MLDEAHERT+Y DI  GLLKKI +KR DLR+IVASATLDAE+F++FF  N +++ T +T  IL+++GR  PVD+ Y   P   YV+A  +  + +H +E  GDIL F+ G EE++  V ML + A     S            G    L++LP Y+ LP + QMKVFE     VR+VVVATNIAETS+TI+GI +VID G  +L  Y+   G  SLV    S+ASA QRAGRAGR   GKC RL TE+ Y  L PA T+PEMQRS+++ V+L LKALGID+VL F FLSPP AETM++ALELLYALG+LDD C LT+PLG+ MAEFP+ P  AK L+ + +F C E+ LT+AAM  +QN F+       ++ E  RE   +FAV EGDH+T LN+Y  F      ++WCQ + LNY+ L+RA  +R QL +   +F  P  K SS GD    LR C+VAGFFAN AKL   G YRT+RD   + IHPSSVL +   PPEW++F+E+ +TS+ + RD+++V+P WL+ELAPHFY+
Sbjct:   10 FWKPGTEGPGTAISEERQSAAEASGTAVIYNPHTSLSIEQQRQRLPIFKHRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVSVAGRVAEERGALLGHEVGYCIRFDDCTDSQATRIKFLTDGMLVREMMADPLLKKYSVLMLDEAHERTLYTDISIGLLKKIQKKRGDLRLIVASATLDAERFKEFFNQNETEDVTKDTCAILTVEGRTFPVDIFYTLSPVPDYVKATAETVMKIHQNEGDGDILAFVTGQEEVETVVSMLIEQARLLARS------------GMQKHLRILPMYAGLPSSEQMKVFERVSHNVRKVVVATNIAETSITINGIVFVIDCGFVKLRAYNHKTGIESLVVVPVSQASASQRAGRAGRNRSGKCYRLYTEEDYESLFPA-TVPEMQRSNMAPVILQLKALGIDNVLRFNFLSPPPAETMVQALELLYALGSLDDQCCLTDPLGLRMAEFPLNPMFAKMLLESGNFGCSEEILTIAAMTQIQNVFVVPPN---QKAEAARE-QRKFAVAEGDHLTMLNIYESFLKNSKSSQWCQQHFLNYKGLIRATTVREQLKKLLTKFKIP--KKSSEGDPDPVLR-CIVAGFFANAAKLHYTGSYRTLRDDYELHIHPSSVL-YGEKPPEWVVFNEVIQTSKYFMRDITLVEPSWLLELAPHFYQ 686          
BLAST of mRNA_H-paniculata_contig1515.3045.1 vs. uniprot
Match: A0A3P8SGK2_AMPPE (RNA helicase n=30 Tax=Euteleosteomorpha TaxID=1489388 RepID=A0A3P8SGK2_AMPPE)

HSP 1 Score: 679 bits (1753), Expect = 8.840e-232
Identity = 364/701 (51.93%), Postives = 477/701 (68.05%), Query Frame = 2
Query:   32 FWKPGTSAPGVVERGDDSLQVMDGRLAHLPLTA-----QRKALPIFRHRNSVLFALEKHRTVVIVGETGCGKTTQIPQYLHEEGWTAGNHEVVCTQPRRVAALTVASRVAEEMGSRLGDDVGYAVRFDARVGPR-TKIKFCTDGMLLREMMLDPLLLTYSVVMLDEAHERTIYNDILFGLLKKIMRKRKDLRIIVASATLDAEQFRDFFETNRSKNATANTATILSIQGRQHPVDVLYMEKPASSYVQAAVDAALAVHSSEPIGDILIFLPGAEEIDAAVEMLRDHAPAAGGSNRWGTSTTRGANGEGGSLQVLPFYSALPVNMQMKVFEARRQGVRRVVVATNIAETSVTIDGIRYVIDSGVTRLPVYDPAQGFGSLVTALTSKASAKQRAGRAGRMAPGKCLRLMTEKHYHDLLPAQTIPEMQRSDLSWVVLLLKALGIDDVLHFEFLSPPSAETMIRALELLYALGALDDSCRLTEPLGMTMAEFPVEPCVAKFLISAWDFDCVEDALTVAAMLTVQNPFL----HARKGGRERRERVREAMEEFAVIEGDHVTYLNVYNCFEGAGSDAEWCQDNCLNYRALVRAGEIRLQLARYCKRFAPPGKKPSSCGDDINALRRCLVAGFFANIAKLSPDGRYRTVRDGTVIAIHPSSVLAHFGS-PPEWILFHEISKTSQLYARDVSVVDPRWLVELAPHFYE 2101
            FWKPGT APG+ E  + + +     +   P TA     QR+ LP+F+HRN++L+ +E ++TV+IVGETGCGKTTQIPQYL E GW A    +  TQPRRVAA++VA+RVAEE G+ LG +VGY +RFD    P  T+IKF TDGML+REMM DPLL  YSV+MLDEAHERT+Y DI  GLLKKI +KR+DLR+IVASATLDA++F DFF  N S +   +T  IL+++GR  PVDV Y   P   YV+A V+  L +H +E  GD+L FL G EE++  V +L+D A +    +R+G             L+VLP YS LP   QMKVFE     VR++VVATNIAETS+TI+GI +VID    +L  Y+P     SLV    SKASA QRAGRAGR  PGKC RL TE+ + + LPA T+PEMQR++L+ V+L LKALGID+VL F FLSPP A+TM++ALELLYALG LD   RLT+P+G+ MAEFP+ P  AK L+ + +F C ++ +T+AAM+ +QN F       +   RE R+        FAV EGDH+T LNVY  F      ++WCQ++ LNY+ L+RA  +R QL R   +F  P  + SS GD  + + +C+V+GFFAN A++   G YRT+RD   + IHP+SVL  FG  PP+W++F+E+ +TS+ Y RDV+ V+  WLVELAPHFY+
Sbjct:   24 FWKPGTEAPGISEERELNSETTGSPIIFNPHTALSIEKQRQKLPVFKHRNNILYLVESYQTVIIVGETGCGKTTQIPQYLLEAGWAAEGKVIGVTQPRRVAAISVANRVAEERGALLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMADPLLKKYSVLMLDEAHERTLYTDIAIGLLKKIQKKRRDLRLIVASATLDAKKFHDFFNLNESGDPNKDTCGILTVEGRTFPVDVFYTVSPVPDYVKATVETVLKIHETEDDGDVLAFLTGQEEVEKVVSLLQDQARSL---SRYGMKK---------HLRVLPMYSGLPYAEQMKVFERMPSSVRKIVVATNIAETSITINGIVFVIDCAFVKLRAYNPRTAIESLVVTPISKASASQRAGRAGRNRPGKCFRLYTEEDF-EKLPASTVPEMQRTNLAPVILQLKALGIDNVLRFSFLSPPPAQTMVQALELLYALGGLDHYGRLTDPMGVRMAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQNIFAVPPNQKKAAAREHRK--------FAVAEGDHLTMLNVYEAFIKHQKSSQWCQEHFLNYKGLLRAVTVREQLRRLMNKFKVP--RTSSEGDP-DVILKCIVSGFFANAARIHHSGSYRTLRDDRELHIHPNSVL--FGEKPPKWVVFNEVVQTSKYYMRDVTAVESSWLVELAPHFYK 698          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1515.3045.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRA6_ECTSI0.000e+081.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z495_9STRA6.720e-28057.88P-loop containing nucleoside triphosphate hydrolas... [more]
W7TSM4_9STRA5.640e-24853.54Deah (Asp-glu-ala-his) box polypeptide 35 n=2 Tax=... [more]
A0A7S2W5S5_9STRA6.500e-24550.32Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A0L0HH03_SPIPD5.200e-23651.21Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
A0A7K4K190_9AVES2.220e-23252.14RNA helicase (Fragment) n=1 Tax=Crypturellus soui ... [more]
A0A6P8I280_ACTTE2.740e-23251.00probable ATP-dependent RNA helicase DHX35 isoform ... [more]
A0A7K7VGR2_EUDEL2.750e-23251.86RNA helicase (Fragment) n=8 Tax=Aves TaxID=8782 Re... [more]
UPI001CFAAF672.930e-23252.58probable ATP-dependent RNA helicase DHX35 n=1 Tax=... [more]
A0A3P8SGK2_AMPPE8.840e-23251.93RNA helicase n=30 Tax=Euteleosteomorpha TaxID=1489... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1515contigH-paniculata_contig1515:16320..22437 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1196.4
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7FRA6
Preferred nameDHX35
KEGG koko:K13117
KEGG ModuleM00355
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005737,GO:0005829,GO:0005911,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009506,GO:0009987,GO:0010467,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030054,GO:0032991,GO:0034641,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0055044,GO:0070035,GO:0071704,GO:0090304,GO:0097159,GO:0140098,GO:1901360,GO:1901363,GO:1990904
EggNOG free text desc.helicase activity
EggNOG OGsCOG1643@1,KOG0922@2759
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-26_002440.1
EC3.6.4.13
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00002,ko01000,ko03041
Exons9
Model size2780
Cds size2187
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929214.6057496-UTR-H-paniculata_contig1515:16319..163411622929214.6057496-UTR-H-paniculata_contig1515:16319..16341Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1515 16320..16341 +
1691480773.2789137-UTR-H-paniculata_contig1515:16319..163411691480773.2789137-UTR-H-paniculata_contig1515:16319..16341Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1515 16320..16341 +
1622929214.738999-UTR-H-paniculata_contig1515:21866..224371622929214.738999-UTR-H-paniculata_contig1515:21866..22437Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1515 21867..22437 +
1691480773.3995125-UTR-H-paniculata_contig1515:21866..224371691480773.3995125-UTR-H-paniculata_contig1515:21866..22437Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1515 21867..22437 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929214.621952-CDS-H-paniculata_contig1515:16341..165601622929214.621952-CDS-H-paniculata_contig1515:16341..16560Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1515 16342..16560 +
1691480773.2915936-CDS-H-paniculata_contig1515:16341..165601691480773.2915936-CDS-H-paniculata_contig1515:16341..16560Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1515 16342..16560 +
1622929214.6347182-CDS-H-paniculata_contig1515:16956..171201622929214.6347182-CDS-H-paniculata_contig1515:16956..17120Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1515 16957..17120 +
1691480773.300614-CDS-H-paniculata_contig1515:16956..171201691480773.300614-CDS-H-paniculata_contig1515:16956..17120Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1515 16957..17120 +
1622929214.6508331-CDS-H-paniculata_contig1515:17459..176341622929214.6508331-CDS-H-paniculata_contig1515:17459..17634Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1515 17460..17634 +
1691480773.3095355-CDS-H-paniculata_contig1515:17459..176341691480773.3095355-CDS-H-paniculata_contig1515:17459..17634Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1515 17460..17634 +
1622929214.6662252-CDS-H-paniculata_contig1515:17855..179261622929214.6662252-CDS-H-paniculata_contig1515:17855..17926Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1515 17856..17926 +
1691480773.3266609-CDS-H-paniculata_contig1515:17855..179261691480773.3266609-CDS-H-paniculata_contig1515:17855..17926Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1515 17856..17926 +
1622929214.6809554-CDS-H-paniculata_contig1515:18284..191701622929214.6809554-CDS-H-paniculata_contig1515:18284..19170Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1515 18285..19170 +
1691480773.3423183-CDS-H-paniculata_contig1515:18284..191701691480773.3423183-CDS-H-paniculata_contig1515:18284..19170Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1515 18285..19170 +
1622929214.6932392-CDS-H-paniculata_contig1515:19481..197351622929214.6932392-CDS-H-paniculata_contig1515:19481..19735Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1515 19482..19735 +
1691480773.3542793-CDS-H-paniculata_contig1515:19481..197351691480773.3542793-CDS-H-paniculata_contig1515:19481..19735Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1515 19482..19735 +
1622929214.7076428-CDS-H-paniculata_contig1515:20127..201991622929214.7076428-CDS-H-paniculata_contig1515:20127..20199Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1515 20128..20199 +
1691480773.3634868-CDS-H-paniculata_contig1515:20127..201991691480773.3634868-CDS-H-paniculata_contig1515:20127..20199Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1515 20128..20199 +
1622929214.7181697-CDS-H-paniculata_contig1515:21222..214261622929214.7181697-CDS-H-paniculata_contig1515:21222..21426Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1515 21223..21426 +
1691480773.3737743-CDS-H-paniculata_contig1515:21222..214261691480773.3737743-CDS-H-paniculata_contig1515:21222..21426Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1515 21223..21426 +
1622929214.728656-CDS-H-paniculata_contig1515:21724..218661622929214.728656-CDS-H-paniculata_contig1515:21724..21866Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1515 21725..21866 +
1691480773.3916078-CDS-H-paniculata_contig1515:21724..218661691480773.3916078-CDS-H-paniculata_contig1515:21724..21866Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1515 21725..21866 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1515.3045.1prot_H-paniculata_contig1515.3045.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1515 16342..21866 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1515.3045.1

>prot_H-paniculata_contig1515.3045.1 ID=prot_H-paniculata_contig1515.3045.1|Name=mRNA_H-paniculata_contig1515.3045.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=729bp
MAGFWKPGTSAPGVVERGDDSLQVMDGRLAHLPLTAQRKALPIFRHRNSV
LFALEKHRTVVIVGETGCGKTTQIPQYLHEEGWTAGNHEVVCTQPRRVAA
LTVASRVAEEMGSRLGDDVGYAVRFDARVGPRTKIKFCTDGMLLREMMLD
PLLLTYSVVMLDEAHERTIYNDILFGLLKKIMRKRKDLRIIVASATLDAE
QFRDFFETNRSKNATANTATILSIQGRQHPVDVLYMEKPASSYVQAAVDA
ALAVHSSEPIGDILIFLPGAEEIDAAVEMLRDHAPAAGGSNRWGTSTTRG
ANGEGGSLQVLPFYSALPVNMQMKVFEARRQGVRRVVVATNIAETSVTID
GIRYVIDSGVTRLPVYDPAQGFGSLVTALTSKASAKQRAGRAGRMAPGKC
LRLMTEKHYHDLLPAQTIPEMQRSDLSWVVLLLKALGIDDVLHFEFLSPP
SAETMIRALELLYALGALDDSCRLTEPLGMTMAEFPVEPCVAKFLISAWD
FDCVEDALTVAAMLTVQNPFLHARKGGRERRERVREAMEEFAVIEGDHVT
YLNVYNCFEGAGSDAEWCQDNCLNYRALVRAGEIRLQLARYCKRFAPPGK
KPSSCGDDINALRRCLVAGFFANIAKLSPDGRYRTVRDGTVIAIHPSSVL
AHFGSPPEWILFHEISKTSQLYARDVSVVDPRWLVELAPHFYEFRGTGVG
GGAGSSKLGSKRRLGPERPTSNNLDGDN*
back to top

mRNA from alignment at H-paniculata_contig1515:16320..22437+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1515.3045.1 ID=mRNA_H-paniculata_contig1515.3045.1|Name=mRNA_H-paniculata_contig1515.3045.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6118bp|location=Sequence derived from alignment at H-paniculata_contig1515:16320..22437+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGACACAAGAAGACAACGAGCAATGGCTGGCTTCTGGAAACCAGGTACCT CAGCCCCGGGAGTAGTAGAACGTGGAGATGATTCATTACAAGTCATGGAT GGAAGACTCGCTCATTTGCCTCTCACTGCTCAACGGAAAGCCCTCCCCAT TTTCCGACATCGTAACAGCGTGTTATTTGCCTTGGAGAAACACCGCACCG TCGTCATTGTGGGAGAAACTGGTTGTGGGAAAACAACACAGGTATGTAGC TGGATTGAAGAATGCATTTGCGCCATTCAGCAGTTTGTTTGTGGTGGATT GACTTACTTTATCTCCGTGCAATCTCCCACTCGATAGCGCTTTACGCGGT ATTCATGTACTATGATTATATAGATCTCTGATGTACTACTGATAGTATCA ACCATAATTCAAAATGAGCTGAGTAGGTATTTCTCTGTTGTGGTGATCAT TTTGATGCAAAGGTAGGCTCCGAATCCGACAGTCCCTTACCAGCCCGGAA GGCTTCGTTAAAACAACTGTTCCGGCTTCGTTTGATGTTTCGATCTCGGT CTCCTTCTTTGAGCGCCTCTTACAAAATTATTCTACTTGAAATTGAACAA TTATCGATGGTACTGTATTGCTGGATGCTGCACTCAGATCCCGCAATACC TGCACGAGGAAGGGTGGACAGCTGGCAATCACGAAGTAGTGTGTACACAG CCTCGGCGTGTTGCTGCCTTAACTGTTGCGTCTCGTGTCGCTGAGGAGAT GGGATCGCGGTTGGGAGATGACGTGGGCTACGCCGTACGATTCGACGCAA GGTGAGTCAATCACGGAAGCTAGGTATTGGTGTTGCATGTATCGATACAT GAGAGTCGGCGGATCGAGTTCCATCAGGTCCCGGTCTCCCTAGTATGCGC CATGCTACGGTGTATCTCCGCATTCTGTGCGACAAAATGGACAGTGGTCC AGAACAATTTCGCGGAGGACCCTGCAACCCTTCCAGGGTTGCCTCCTCAA GGTAGGCAAGGTCAAGGGTCGAAATGGTTAAATAGGTCAATACTTCAACG GTGTTGCGATAAGTGGCATATACTGTATTCCACAAACGCGATCATTTGAT GGCGTCTGGTTTATATCCCACCTCCAATCTGTCGGCTCAGGGTCGGCCCT CGTACCAAGATAAAGTTCTGCACCGATGGCATGCTTCTGCGGGAGATGAT GCTAGACCCGCTACTGTTGACCTACAGCGTGGTGATGCTAGATGAGGCGC ACGAACGGACAATCTACAACGACATCTTGTTCGGGCTACTTAAGAAGATC ATGCGGAAAAGGAAGGTCAGAGATGAGCGAAGGATATGTTGAAAGTTTGT GCAACTTTCAGATGCAAGCGTCGCGCAGTGGTTAGTTCGTGAGAAGTACC CAAAATCCCTCCCAATCGATGTCATGTAAGCGTTTTAAGAGCATGATATC AACATGGTTGTCCGTGGTGTCTCAGAAACAGCGTTGGGTGTATGCAGGGT ATTTCTGAAATGGCCTCTTCTTGTCCGTGGCAACAGGACTTGCGCATCAT TGTCGCTTCGGCTACCCTAGACGCTGAGCAGTTTCGAGATTTTTTCGAGA CGAACAGGTGAGCGAAGAAACAAATGGATTTCGCCTTCTGGCGAGCCACG TTTTTGTGCCGTCGCTGCTTTGAAGGCTCCAATTGCCGGAGACATGTGAT GCCCCTAGAGTTAGAGACGCTTGTGATCTGCTGCGACCTAGACAGTAATC GCCGCAGTTTACACTTCCTGCGCAATAAGTTCATATGTGAATATTCAGTA AACACGTTTTTGAGGATGGTGAGCATAAATACACCATCCTAGATTTGGGA GGCAATGCCTCGTGTGAGAACGAGGTAATGATAACGGTTTGTACGTGTTT ACACCACACGCACTTGTCGTGCTCATGTGTGTGCAATTCGTCGCGATTCC TTCCTTCGCCGGCAGATCAAAAAATGCAACTGCGAACACGGCAACAATAT TATCTATCCAAGGACGTCAGCACCCAGTCGACGTGCTGTACATGGAAAAG CCTGCGAGCAGTTACGTCCAGGCGGCGGTGGATGCTGCACTCGCGGTGCA CTCCTCAGAACCAATCGGTGACATTTTGATATTTTTACCGGGTGCCGAGG AGATTGATGCTGCGGTCGAAATGCTGCGCGACCACGCACCGGCAGCCGGG GGTTCGAATCGCTGGGGCACTTCAACAACAAGGGGGGCGAACGGGGAGGG AGGTTCGTTACAAGTGCTGCCATTTTATTCTGCGCTTCCGGTAAATATGC AGATGAAGGTTTTCGAGGCTAGAAGGCAAGGTGTGAGACGAGTTGTGGTG GCGACCAACATCGCGGAGACGTCGGTCACCATAGACGGCATCCGATACGT AATCGATTCCGGGGTTACTCGCCTCCCCGTTTATGATCCGGCTCAGGGTT TTGGGTCGCTGGTGACAGCACTAACGTCGAAGGCTTCAGCGAAACAACGA GCGGGACGAGCGGGGCGGATGGCCCCCGGAAAATGCCTTCGTCTCATGAC GGAGAAGCATTATCACGACCTTCTCCCCGCCCAGACGATACCTGAGATGC AGCGATCGGACTTGAGTTGGGTTGTTCTTTTGCTCAAGGCTTTGGGAATT GACGACGTTCTCCACTTCGAGTTCTTATCACCTCCATCAGCGGAGACGAT GATCAGAGCTCTCGAGCTTCTCTACGCGCTGGGTGCGCTTGATGACTCTT GCCGATTAACGGAGCCTCTCGGGATGACCATGGCGGAATTTCCAGTGGAG CCTTGTGTAGCGAAGTTCCTCATTTCAGCGTGGGACTTCGATTGTGTTGA GGTGAGAGGTGATGTGGTGTGGTGTAGAGATTCGTGAAAGCTGCCAGGTA TACATTGTACACATACTACGGCAGCATGTTTCCCTAACGGCCCTGTTCCT CCGCATGTGAAGGATTGTACATATGTTCATGATGTTTTTATGCGGGTACA TGTTACATGTCCTGATGAATGATATTTCCATCGGGCAGAGGTACATAACA CAAATTACGCATGAAAATTGTCCTAGCCACGTTTTTCTCTGTTGCTCGCT CCCAGATGCGTCAATCGCACGCAAAGCGCCCAACCCTGCCACGCTCACAT TGCTTGCAACAGGACGCGCTCACCGTAGCAGCGATGCTGACAGTCCAGAA TCCTTTCCTGCACGCACGAAAAGGCGGGCGCGAGCGACGAGAACGTGTAA GGGAGGCGATGGAAGAATTCGCGGTGATCGAGGGGGATCACGTCACGTAC TTAAACGTGTATAACTGTTTCGAGGGGGCAGGGAGCGATGCTGAGTGGTG TCAAGACAATTGCCTCAACTACAGGGCGCTAGTCCGAGCAGGAGAGATTC GCCTACAGCTCGCAAGGTACGTCTGGTCGTTACTATCCTCTCGTTTTGCA GCGGATGGTCAATGTTGGCGAATTGCAACGAATGCAATAGTTGAACGTAT TGACCAGTCTTACCACCTTCACGGTCGATCGATACTGCCTGTCCCTCTTA AGCGGTCGTGATGTAATATTGGATGAATTGGTCCCCGTGCAGACAGTATG CTCGTCGCTCCCGCAAGCTGTCGCACGGTGACAGTCAGGTACATTTGCTT GGTACGCGCATCTCGCCATGCGACCGTCTGAGGTTGTGTCGCAAACTCTT TCAAATTATGTGACATGTACATATTACTGTGTAGCTCTAAATCTCCATAC GACTAACCCCATCCCCCTGCTATATTCTCCCCGAACTCGCTCCTCTGGTC CTGCAAAGATACTGCAAGCGGTTTGCACCGCCTGGAAAAAAGCCATCGAG TTGCGGCGATGATATAAACGCCTTGCGGAGGTAAGTAGCTAACAATATGC TCTAGTTGAACGTCTGTACGCGAGGTTATCCTGTGCTGATGTACTTGGAC TGGAGGCCGGAGCAGTGCAACTGCGGTTATTTGTTCACCGCTCGGCACCG CGACGCATGATACCTCCGAAATGACCGGGAGAGTTTTTGTTCGAGCCATC CAACGGTCGTGCCTCACTCGAGCCAAACAGCTTATTCACCCTCAATCAGC GCATCTCCCCTTCCTGTTATGGCTCTTGTGGCATGGAGCTGTAAAACTGT TGTATGTAAGGAAATGTAGAAATATTTTGGTAAAATACTTAAGTATGGAA GCATTGGTAAAGGGTTTTGCCTCGGCCTTCCGGGGGTTAAAAAAATAAAC TGCTGTATGTAGGGCACGAGGGGGTTCATGTGGTATATCCTGTATGCTTG TTGACCTCGGCCGAAGACTTCACACACACTAGAATGTCTGCTGATATGGT AGTTATAACGCCCTAGAGTATACTACAAGTGTATCACACATGGAGCGATG TACTCGCTGCGTGTGGCGCGACATTATTTATACGTACGTACGAAGATCAA AGTCCTGTACGGTACTTGGGGTATAATCACGCCTACCAAATGCATAACGT TTGGATGCCCGGGATGCCCAAATCCCCATGGCAGAATCCGGTTAGCGTAG CAGCGCAAGGATGATAACTAGTACCTATTATCAGCCTTGTGAAACGCAGC CTAGCCGGCGAAAACCCGGCAAAGCTCCGTCCCGGTATTGCAGAGATACG AGGTCAATGGTCGGAAGACTACGGCATGCGTTTTCACGAATATACCTCCC CAAAAAATAGTGCATGCGAATGGGTGACAGCCTGGCACCTAGATACGTAG AATCGATACTCCGCGTGGTGGGCATTGTGACTTCCTCGGAACTATTGGCC ACCCATTCCAAGACTGAACCTTGCCAACATTTCTCGTAGGGTTCAACTAG ACAATAGCTTCTTTCCTGCGTCTGGTTGCCACATCTGTGGACCTCTTCAC CAGGTGCTTGGTTGCGGGGTTCTTTGCCAACATCGCGAAGCTTAGTCCTG ACGGCCGCTATCGCACCGTGAGAGACGGCACGGTGATCGCCATTCACCCC TCATCGGTCCTTGCACATTTCGGATCGCCTCCTGAATGGATCTTGTTTCA TGAGATAAGCAAGACGTCACAACTTTACGCGCGAGACGTCAGCGTAGTGG ATCCCAGGTGAGGATGGATTCGGTGGATCGTGTATAGTAGAATTGCTCGG GGAAATTTTGAGATAAGTCTTCTCGCTTGAAAGACCGTTTCTACCCTTGC CTAGCAGGTGCCTGTTGCTGTACGCACGAGTTGCACATATGCAGAGATGC GTGCCACGAGCAACACTTGTGCAGCAGCAAGTAGAGTGCGACCAGCGGCC ATGTGTAGCGCCATGAAGCGTTGTTTCTTAGTGAGCTGGACAGCCATGTG CGTGGAGGGATCTTTAGGTGATGTATACCTCTTCGCCCGCTGCACACAAA CACAGGTGGCTCGTTGAACTGGCGCCTCACTTTTATGAGTTCAGAGGTAC AGGGGTCGGGGGAGGAGCCGGATCAAGCAAACTTGGCTCCAAGCGACGTT TAGGGCCAGAGAGACCCACCTCCAACAACTTGGACGGAGATAACTAGAGA GCGGTGGAACCGCTCACATTTACGCTGCAACATAATGGAGTGCTTACTGT AGCGATTGGTGTAAAAATTATTCTGAGCGCGTATACAGCATTGCAATTTC CTGCAACCCTCGATACATGAGGTGATGTTGTGATTTCTTGGCGTGGTGAC ACAATAGGTGACTTTTGAGAGAGAAGATACTAGCTGACGCGGGCTTTTAC GTTGTTTTTTTAGTAGTTGACGATATATATTGCTGATATACCTGTTCGCT AATGACATGTGCTCACTGTGATTGAAGTTCAAACAGATGCGGTGTTCGAC GTAAGTAAATAGAAAAGTAGCTTGAGATATAACGTGTAGATATATTGGGG AGGCTTTTGCCCACGGACCATTGTGTGTGAATGATGAAATATGTCTGTCT GTCTGCACATATCTCGAAGTTTGTTTTTCCAGAGAAGTGTAGTGGACATT TGTACAGTATACGACGATCGTGTGGTTAAATATATTTACATCTGGGAAAC TCCCACAGTGTTGACCATGCTCTATCGCGGCAGTAGATTCATGGTGTATT CATAATCAAAATATTATC
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig1515:16320..22437+

>mRNA_H-paniculata_contig1515.3045.1 ID=mRNA_H-paniculata_contig1515.3045.1|Name=mRNA_H-paniculata_contig1515.3045.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4374bp|location=Sequence derived from alignment at H-paniculata_contig1515:16320..22437+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCTGGCTTCTGGAAACCAGGTACCTCAGCCCCGGGAGTAGTAGAACG
TGGAGATGATTCATTACAAGTCATGGATGGAAGACTCGCTCATTTGCCTC
TCACTGCTCAACGGAAAGCCCTCCCCATTTTCCGACATCGTAACAGCGTG
TTATTTGCCTTGGAGAAACACCGCACCGTCGTCATTGTGGGAGAAACTGG
TTGTGGGAAAACAACACAGATGGCTGGCTTCTGGAAACCAGGTACCTCAG
CCCCGGGAGTAGTAGAACGTGGAGATGATTCATTACAAGTCATGGATGGA
AGACTCGCTCATTTGCCTCTCACTGCTCAACGGAAAGCCCTCCCCATTTT
CCGACATCGTAACAGCGTGTTATTTGCCTTGGAGAAACACCGCACCGTCG
TCATTGTGGGAGAAACTGGTTGTGGGAAAACAACACAGATCCCGCAATAC
CTGCACGAGGAAGGGTGGACAGCTGGCAATCACGAAGTAGTGTGTACACA
GCCTCGGCGTGTTGCTGCCTTAACTGTTGCGTCTCGTGTCGCTGAGGAGA
TGGGATCGCGGTTGGGAGATGACGTGGGCTACGCCGTACGATTCGACGCA
AGATCCCGCAATACCTGCACGAGGAAGGGTGGACAGCTGGCAATCACGAA
GTAGTGTGTACACAGCCTCGGCGTGTTGCTGCCTTAACTGTTGCGTCTCG
TGTCGCTGAGGAGATGGGATCGCGGTTGGGAGATGACGTGGGCTACGCCG
TACGATTCGACGCAAGGGTCGGCCCTCGTACCAAGATAAAGTTCTGCACC
GATGGCATGCTTCTGCGGGAGATGATGCTAGACCCGCTACTGTTGACCTA
CAGCGTGGTGATGCTAGATGAGGCGCACGAACGGACAATCTACAACGACA
TCTTGTTCGGGCTACTTAAGAAGATCATGCGGAAAAGGAAGGGTCGGCCC
TCGTACCAAGATAAAGTTCTGCACCGATGGCATGCTTCTGCGGGAGATGA
TGCTAGACCCGCTACTGTTGACCTACAGCGTGGTGATGCTAGATGAGGCG
CACGAACGGACAATCTACAACGACATCTTGTTCGGGCTACTTAAGAAGAT
CATGCGGAAAAGGAAGGACTTGCGCATCATTGTCGCTTCGGCTACCCTAG
ACGCTGAGCAGTTTCGAGATTTTTTCGAGACGAACAGGACTTGCGCATCA
TTGTCGCTTCGGCTACCCTAGACGCTGAGCAGTTTCGAGATTTTTTCGAG
ACGAACAGATCAAAAAATGCAACTGCGAACACGGCAACAATATTATCTAT
CCAAGGACGTCAGCACCCAGTCGACGTGCTGTACATGGAAAAGCCTGCGA
GCAGTTACGTCCAGGCGGCGGTGGATGCTGCACTCGCGGTGCACTCCTCA
GAACCAATCGGTGACATTTTGATATTTTTACCGGGTGCCGAGGAGATTGA
TGCTGCGGTCGAAATGCTGCGCGACCACGCACCGGCAGCCGGGGGTTCGA
ATCGCTGGGGCACTTCAACAACAAGGGGGGCGAACGGGGAGGGAGGTTCG
TTACAAGTGCTGCCATTTTATTCTGCGCTTCCGGTAAATATGCAGATGAA
GGTTTTCGAGGCTAGAAGGCAAGGTGTGAGACGAGTTGTGGTGGCGACCA
ACATCGCGGAGACGTCGGTCACCATAGACGGCATCCGATACGTAATCGAT
TCCGGGGTTACTCGCCTCCCCGTTTATGATCCGGCTCAGGGTTTTGGGTC
GCTGGTGACAGCACTAACGTCGAAGGCTTCAGCGAAACAACGAGCGGGAC
GAGCGGGGCGGATGGCCCCCGGAAAATGCCTTCGTCTCATGACGGAGAAG
CATTATCACGACCTTCTCCCCGCCCAGACGATACCTGAGATGCAGCGATC
GGACTTGAGTTGGGTTGTTCTTTTGCTCAAGGCTTTGGGAATTGACGACG
TTCTCCACTTCGAGTTCTTATCACCTCCATCAGCGGAGACGATGATCAGA
GCTCTCGAGCTTCTCTACGCGCTGGGTGCGCTTGATGACTCTTGCCGATT
AACGGAGCCTCTCGGGATGACCATGGCGGAATTTCCAGTGGAGCCTTGTG
TAGCGAAGTTCCTCATTTCAGCGTGGGACTTCGATTGTGTTGAGATCAAA
AAATGCAACTGCGAACACGGCAACAATATTATCTATCCAAGGACGTCAGC
ACCCAGTCGACGTGCTGTACATGGAAAAGCCTGCGAGCAGTTACGTCCAG
GCGGCGGTGGATGCTGCACTCGCGGTGCACTCCTCAGAACCAATCGGTGA
CATTTTGATATTTTTACCGGGTGCCGAGGAGATTGATGCTGCGGTCGAAA
TGCTGCGCGACCACGCACCGGCAGCCGGGGGTTCGAATCGCTGGGGCACT
TCAACAACAAGGGGGGCGAACGGGGAGGGAGGTTCGTTACAAGTGCTGCC
ATTTTATTCTGCGCTTCCGGTAAATATGCAGATGAAGGTTTTCGAGGCTA
GAAGGCAAGGTGTGAGACGAGTTGTGGTGGCGACCAACATCGCGGAGACG
TCGGTCACCATAGACGGCATCCGATACGTAATCGATTCCGGGGTTACTCG
CCTCCCCGTTTATGATCCGGCTCAGGGTTTTGGGTCGCTGGTGACAGCAC
TAACGTCGAAGGCTTCAGCGAAACAACGAGCGGGACGAGCGGGGCGGATG
GCCCCCGGAAAATGCCTTCGTCTCATGACGGAGAAGCATTATCACGACCT
TCTCCCCGCCCAGACGATACCTGAGATGCAGCGATCGGACTTGAGTTGGG
TTGTTCTTTTGCTCAAGGCTTTGGGAATTGACGACGTTCTCCACTTCGAG
TTCTTATCACCTCCATCAGCGGAGACGATGATCAGAGCTCTCGAGCTTCT
CTACGCGCTGGGTGCGCTTGATGACTCTTGCCGATTAACGGAGCCTCTCG
GGATGACCATGGCGGAATTTCCAGTGGAGCCTTGTGTAGCGAAGTTCCTC
ATTTCAGCGTGGGACTTCGATTGTGTTGAGGACGCGCTCACCGTAGCAGC
GATGCTGACAGTCCAGAATCCTTTCCTGCACGCACGAAAAGGCGGGCGCG
AGCGACGAGAACGTGTAAGGGAGGCGATGGAAGAATTCGCGGTGATCGAG
GGGGATCACGTCACGTACTTAAACGTGTATAACTGTTTCGAGGGGGCAGG
GAGCGATGCTGAGTGGTGTCAAGACAATTGCCTCAACTACAGGGCGCTAG
TCCGAGCAGGAGAGATTCGCCTACAGCTCGCAAGGACGCGCTCACCGTAG
CAGCGATGCTGACAGTCCAGAATCCTTTCCTGCACGCACGAAAAGGCGGG
CGCGAGCGACGAGAACGTGTAAGGGAGGCGATGGAAGAATTCGCGGTGAT
CGAGGGGGATCACGTCACGTACTTAAACGTGTATAACTGTTTCGAGGGGG
CAGGGAGCGATGCTGAGTGGTGTCAAGACAATTGCCTCAACTACAGGGCG
CTAGTCCGAGCAGGAGAGATTCGCCTACAGCTCGCAAGATACTGCAAGCG
GTTTGCACCGCCTGGAAAAAAGCCATCGAGTTGCGGCGATGATATAAACG
CCTTGCGGAGATACTGCAAGCGGTTTGCACCGCCTGGAAAAAAGCCATCG
AGTTGCGGCGATGATATAAACGCCTTGCGGAGGTGCTTGGTTGCGGGGTT
CTTTGCCAACATCGCGAAGCTTAGTCCTGACGGCCGCTATCGCACCGTGA
GAGACGGCACGGTGATCGCCATTCACCCCTCATCGGTCCTTGCACATTTC
GGATCGCCTCCTGAATGGATCTTGTTTCATGAGATAAGCAAGACGTCACA
ACTTTACGCGCGAGACGTCAGCGTAGTGGATCCCAGGTGCTTGGTTGCGG
GGTTCTTTGCCAACATCGCGAAGCTTAGTCCTGACGGCCGCTATCGCACC
GTGAGAGACGGCACGGTGATCGCCATTCACCCCTCATCGGTCCTTGCACA
TTTCGGATCGCCTCCTGAATGGATCTTGTTTCATGAGATAAGCAAGACGT
CACAACTTTACGCGCGAGACGTCAGCGTAGTGGATCCCAGGTGGCTCGTT
GAACTGGCGCCTCACTTTTATGAGTTCAGAGGTACAGGGGTCGGGGGAGG
AGCCGGATCAAGCAAACTTGGCTCCAAGCGACGTTTAGGGCCAGAGAGAC
CCACCTCCAACAACTTGGACGGAGATAACTAGGTGGCTCGTTGAACTGGC
GCCTCACTTTTATGAGTTCAGAGGTACAGGGGTCGGGGGAGGAGCCGGAT
CAAGCAAACTTGGCTCCAAGCGACGTTTAGGGCCAGAGAGACCCACCTCC
AACAACTTGGACGGAGATAACTAG
back to top