mRNA_H-paniculata_contig1515.3044.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1515.3044.1
Unique NamemRNA_H-paniculata_contig1515.3044.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig1515.3044.1 vs. uniprot
Match: D7FRA7_ECTSI (PRK domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRA7_ECTSI)

HSP 1 Score: 331 bits (849), Expect = 6.380e-100
Identity = 175/303 (57.76%), Postives = 225/303 (74.26%), Query Frame = 3 
Query: 1899 MALAKELTKMEAQSIGVSDVPSLEAAAVGKLREKVLKQGGLHVSLDCRNKILAISEVELDETILPLCSWLIGLVEAQGKAAGGRVLVGMVGAAAAGKSTLAQLVCAACDVLLGIDKWGQCVSMDGYSFSNSHLLAQPATDHLGNECTLKDIKGAPSTLDAKAFLRDLLCLRSSSRGAETILLPAYSRVLHDPVPECVAVVPECRVVIVEGLHLLHVEDQWKKISNMFHRTVFLDIERSCCFERVVGRKVANGRSRESSEAHFWRVDGPIFDQLQEEKKRAHVVLTVRPNGHQALLISNVEARL 2807
            MAL+  L  +EAQ+ GVS++P LE++ V ++++ +   GGL +  DCR +IL ++E +L E ILPLC+WL G+ +      G RVLVG+ G+AAAGKSTLAQ++CAA  ++ G     QCVSMD YS+ N+HL A+  T++LG  CTLKDIKG P TLD  + LRDL  LR+ S+  E+I LPAYSR LHDPVP+ V V P+CRVV+VEGLHLLH E  WK+IS   HRT+FLDI RS CF+RVVGRKVANGRSRESSE+HF RVDGP++DQLQEEKKRA +VL V+P   + L +SN+  +L
Sbjct:    1 MALSDALAALEAQT-GVSEMPPLESSHVDRMKQAIEAAGGLPIERDCRKEILGVNEADLAEVILPLCTWLKGITQGP-SGEGERVLVGLCGSAAAGKSTLAQILCAAYGIIWGASSI-QCVSMDAYSYPNAHLAAE-VTEYLGRACTLKDIKGLPKTLDCASLLRDLGRLRTPSK--ESIKLPAYSRDLHDPVPDSVTVAPDCRVVLVEGLHLLHQEGLWKEISAALHRTIFLDISRSVCFDRVVGRKVANGRSRESSESHFDRVDGPVWDQLQEEKKRADLVLVVQPTSDRQLWVSNIVTKL 297
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BLAST of mRNA_H-paniculata_contig1515.3044.1 vs. uniprot
Match: A0A7K3B2A8_9ACTN (Nucleoside/nucleotide kinase family protein n=2 Tax=Streptomyces TaxID=1883 RepID=A0A7K3B2A8_9ACTN)

HSP 1 Score: 98.6 bits (244), Expect = 2.270e-19
Identity = 72/209 (34.45%), Postives = 107/209 (51.20%), Query Frame = 3 
Query: 2142 GGRVLVGMVGAAAAGKSTLAQLVCAACDVLLGIDKWGQCVSMDGYSFSNSHLLAQPATDHLGNECTLKDIKGAPSTLDAKAFLRDLLCLRSSSRGAETILLPAYSRVLHDPVPECVAVVPECRVVIVEGLHLLHVEDQWKKISNMFHRTVFLDIERSCCFERVVGRKVANGRSRESSEAHFWRVDGPIFDQLQEEKKRAHVVLTVRPNG 2768
            G RVL+G+ GA AAGKSTLA+ +  A D  LG       V MDG+  SN+ L      D LG    L+  KGAP T D   ++  L  LRS  R A T+  P + R L +PV   ++V P+ R+V+ EG +L      W ++ ++     F++ + +   ER++ R V  GR+   + A     + P  + L+ E  R+     VRP+G
Sbjct:   15 GRRVLLGLAGAPAAGKSTLARAMVEAVDARLGAGTAAY-VPMDGFHLSNAQL------DRLG----LRGRKGAPETFDVDGYVHLLRRLRS--RQAGTVYAPDFDRALDEPVAAGISVPPQARLVVTEGNYLADDAAGWHEVRDLLDELWFVETDPAVREERLLARHVTGGRTEAEARAFIEASERP--NALRVESTRSACTRVVRPDG 208
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BLAST of mRNA_H-paniculata_contig1515.3044.1 vs. uniprot
Match: A0A1H0D1P0_9ACTN (Phosphoribulokinase / Uridine kinase family protein n=1 Tax=Streptomyces guanduensis TaxID=310781 RepID=A0A1H0D1P0_9ACTN)

HSP 1 Score: 95.1 bits (235), Expect = 3.020e-18
Identity = 69/200 (34.50%), Postives = 103/200 (51.50%), Query Frame = 3 
Query: 2142 GGRVLVGMVGAAAAGKSTLAQLVCAACDVLLGIDKWGQCVSMDGYSFSNSHLLAQPATDHLGNECTLKDIKGAPSTLDAKAFLRDLLCLRSSSRGAETILLPAYSRVLHDPVPECVAVVPECRVVIVEGLHLLHVEDQWKKISNMFHRTVFLDIERSCCFERVVGRKVANGRSRESSEAHFWRVDGPIFDQLQEEKKRAH 2741
            G RVL+G+ GA AAGKSTLA+ +    D  LG      CV MDG+  SN+ L      D LG    L+D KGAP T D   ++  L  LR++      +  P + R L +PV   + V PE R+V+ EG +L    + W ++ ++     +++  R    +R++ R V  GRS+E + A     + P  + L+ E  RAH
Sbjct:   15 GRRVLLGLAGAPAAGKSTLARHLVTEVDARLGPGT-AACVPMDGFHLSNAQL------DRLG----LRDRKGAPETFDVDGYVHLLRRLRAARE--RPVYAPDFDRSLDEPVAAGLVVPPEARLVVTEGNYLADDGEDWAEVRDLLDELWYVEAPRHLREQRLLHRHVIGGRSQEEAMAFIAASERP--NALRAESGRAH 199
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BLAST of mRNA_H-paniculata_contig1515.3044.1 vs. uniprot
Match: G8RZA6_ACTS5 (Putative fructose transport system kinase n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) TaxID=134676 RepID=G8RZA6_ACTS5)

HSP 1 Score: 94.0 bits (232), Expect = 9.650e-18
Identity = 76/217 (35.02%), Postives = 107/217 (49.31%), Query Frame = 3 
Query: 2142 GGRVLVGMVGAAAAGKSTLAQLVCAACDVLLGIDKWGQC-VSMDGYSFSNSHLLAQPATDHLGNECTLKDIKGAPSTLDAKAFLRDLLCLRSSSRGAETILLPAYSRVLHDPVPECVAVVPECRVVIVEGLHLLHVEDQWKKISNMFHRTVFLDIERSCCFERVVGRKVANGRSRESSEAHFWRVDGPIFDQLQEEKKRAHVVLTVRPNGHQALLIS 2789
            G RVL+G+ G   AGKSTLA  + A      G D      V MDG+  SN+ L           E  L+D KGAP T D   F  DLLC    ++  + I  PAYSR LH+PVP+   +    R++I EG +LL  +D W ++        +LD+      +R+V R+VA GR+ E++ A  W VDG           + +  L V   G  A+++S
Sbjct:   22 GRRVLIGIAGPPGAGKSTLAAWLQARVTERFGADPLLVAQVPMDGFHLSNAVLA----------ERGLRDRKGAPETFDRDGFA-DLLCRARDAQ--DEIGAPAYSRELHEPVPDAHRIPASVRLIISEGNYLLLPDDGWDRVGECLDEIWYLDVPWEVTRQRLVDRQVAGGRTPEAAAA--W-VDG---------NDKRNTGLVVAAAGRAAVIVS 213
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BLAST of mRNA_H-paniculata_contig1515.3044.1 vs. uniprot
Match: A0A8J3YL85_9ACTN (Nucleoside/nucleotide kinase family protein n=1 Tax=Virgisporangium aliadipatigenens TaxID=741659 RepID=A0A8J3YL85_9ACTN)

HSP 1 Score: 93.6 bits (231), Expect = 1.190e-17
Identity = 68/205 (33.17%), Postives = 105/205 (51.22%), Query Frame = 3 
Query: 2145 GRVLVGMVGAAAAGKSTLAQLVCAACDVLLGIDKWGQCVSMDGYSFSNSHLLAQPATDHLGNECTLKDIKGAPSTLDAKAFLRDLLCLRSSSRGAETILLPAYSRVLHDPVPECVAVVPECRVVIVEGLHLLHVEDQWKKISNMFHRTVFLDIERSCCFERVVGRKVANGRSRESSEAHFWRVDGPIFDQLQEEKKRAHVVLTVR 2759
            GR+LVG+ G  AAGKSTLA  + AA     G+      V MDG+  +N+ L        LG    L D KGAP T DA  F+  L  LR +  G + +  PA+ RV+++ +   + V P+ RV+++EG +LL     W ++ ++   T++LD       + +V R+ A G SR +++      D      ++  + RA  VLT R
Sbjct:   23 GRLLVGLCGPPAAGKSTLAAALAAALVNRDGVS--AVAVPMDGFHLANAELA------RLG----LADRKGAPETFDAHGFVHLLQRLRDA--GPDVVYAPAFDRVVNESIGSAIPVPPDIRVIVIEGNYLLLDSHPWDRVRDILDVTLYLDAPHDMRHDALVRRQQARGLSRSAAQDWAAGSDAANARIIESTRDRADRVLTRR 213
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BLAST of mRNA_H-paniculata_contig1515.3044.1 vs. uniprot
Match: A0A3N1HR76_9ACTN (Uncharacterized protein n=1 Tax=Pseudokineococcus lusitanus TaxID=763993 RepID=A0A3N1HR76_9ACTN)

HSP 1 Score: 92.8 bits (229), Expect = 4.840e-17
Identity = 77/228 (33.77%), Postives = 112/228 (49.12%), Query Frame = 3 
Query: 2082 TILPLCSWLIGLVEAQGKAAGGRVLVGMVGAAAAGKSTLAQLVCAACDVLL---GIDKWGQCVS--MDGYSFSNSHLLAQPATDHLGNECTLKDIKGAPSTLDAKAFLRDLLCLRSSSRGAETILLPAYSRVLHDPVPECVAVVPECRVVIVEGLHLLHVEDQWKKISNMFHRTVFLDIERSCCFERVVGRKVANGRSRESSEAHFWRVDGPIFDQLQEEKKRAHVVL 2750
            T+  L   ++ LV+A G   GGRVLVG+ GA AAGK+TLAQ + AA D  L   G  +    V   MDG+  ++  L      + LG    L+D KG P T DA  ++  L  LR++    + +  PA+ R L   +   V V    R+V+ EG +LL  E  W     +     ++D E     ER++ R V  G+SRE + A    VD P        ++RA +V+
Sbjct:   26 TLDDLVERVVALVDAAG---GGRVLVGVAGAPAAGKTTLAQALVAAADARLRGTGTVEGPAAVQVPMDGFHLADVEL------ERLG----LRDRKGTPPTFDAGGYVALLRRLRAADE--DVVYAPAFERDLEQALAGAVPVPAGARLVVTEGNYLLLEEGPWSACGELLDEVWYVDAEEGAREERLLARHVEFGKSREEATAWMAAVDDPDAALAAGSRERADLVV 238
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BLAST of mRNA_H-paniculata_contig1515.3044.1 vs. uniprot
Match: A0A3D1JE85_9CHLR (Uncharacterized protein n=1 Tax=Anaerolinea thermolimosa TaxID=229919 RepID=A0A3D1JE85_9CHLR)

HSP 1 Score: 92.4 bits (228), Expect = 1.090e-16
Identity = 65/248 (26.21%), Postives = 117/248 (47.18%), Query Frame = 3 
Query: 2007 KQGGLHVSLDCRNKILAISEVELDETILPLCSWLIGLVEAQGKAAGGRVLVGMVGAAAAGKSTLAQLVCAACDVLLGIDKWGQCVSMDGYSFSNSHLLAQPATDHLGNECTLKDIKGAPSTLDAKAFLRDLLCLRSSSRGAETILLPAYSRVLHDPVPECVAVVPECRVVIVEGLHLLHVEDQWKKISNMFHRTVFLDIERSCCFERVVGRKVANGRSRESSEAHFWRVDGPIFDQLQEEKKRAHVVL 2750
            K  G H+S D     L + + ++    LP+ ++ +  ++        R LV + G   +GK++ + ++ A  + +    +    V  DG+ F N +L    +T H      L +IKGAP T D  +F   L      +R    +  P YSR LH+PV +   ++P+ R+++VEG +LL     WK++ ++F  TVF+          +  R +  G+S+  +E H  RVD P    + +    A +++
Sbjct:    8 KLAGQHLSPDFSGATLTLKKDQVLFHYLPIATYFLERMDRPW-----RSLVAIAGPPGSGKTSFSLILAALLNTIH--PRLAAVVGQDGWHFPNRYLSTH-STVHHNEPVLLSEIKGAPETFDVDSFTSFL----EQARNQPHLTYPIYSRALHEPVSDAGTILPDHRLILVEGNYLLLNLPPWKELHSLFDHTVFIRAPLDTLLVSLRARHLRGGKSQARTENHLHRVDLPNIQLVLQSSIPADILI 243
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BLAST of mRNA_H-paniculata_contig1515.3044.1 vs. uniprot
Match: UPI001C4E7E90 (nucleoside/nucleotide kinase family protein n=1 Tax=Nocardia sp. MH4 TaxID=1768677 RepID=UPI001C4E7E90)

HSP 1 Score: 90.5 bits (223), Expect = 1.520e-16
Identity = 72/216 (33.33%), Postives = 103/216 (47.69%), Query Frame = 3 
Query: 2136 AAGGRVLVGMVGAAAAGKSTLAQLVCAACDVLLGIDKWGQCVSMDGYSFSNSHLLAQPATDHLGNECTLKDIKGAPSTLDAKAFLRDLLCLRSSSRGAETILLPAYSRVLHDPVPECVAVVPECRVVIVEGLHLLHVEDQ---WKKISNMFHRTVFLDIERSCCFERVVGRKVANGRSRESSEAHFWRVDGPIFDQLQEEKKRAHVVLTVRPNGHQ 2774
            A GGR L+G+ G   AGKSTLAQ +CA    L G  +      MDGY   N  L A+ A             KG P T DA  F+ DL  LR+++ G E +  P + R + +P    V V  E RVV+VEG +LL  + +   W  +  +     +LD  R+   ER++ R    GR+   + A     D    D +   K+RA  VL+   +G++
Sbjct:   15 ATGGRFLLGIAGPPGAGKSTLAQRLCAE---LAGSGRPAVVAPMDGYHLRNEVLRARGAAAR----------KGEPDTFDAAGFVADLRSLRAAAIG-EPVPWPLFDRAIDEPTEGGVVVRDE-RVVVVEGNYLLLTDAEAPGWAPVRGLLDTCWYLDAPRAVLTERLLRRHTLGGRTAAEASAKVTDSDLRNADLVAASKQRADTVLSACGDGYR 215
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BLAST of mRNA_H-paniculata_contig1515.3044.1 vs. uniprot
Match: UPI001821A188 (Nucleoside/nucleotide kinase family protein n=1 Tax=Cupriavidus sp. TaxID=1873897 RepID=UPI001821A188)

HSP 1 Score: 89.4 bits (220), Expect = 2.800e-16
Identity = 63/203 (31.03%), Postives = 103/203 (50.74%), Query Frame = 3 
Query: 2130 GKAAGGRVLVGMVGAAAAGKSTLAQLVCAACDVLLGIDKWGQCVSMDGYSFSNSHLLAQPATDHLGNECTLKDIKGAPSTLDAKAFLRDLLCLRSSSRGAETILLPAYSRVLHDPVPECVAVVPECRVVIVEGLHLLHVEDQWKKISNMFHRTVFLDIERSCCFERVVGRKVANGRSRESSEAHFWRVDGPIFDQLQEEKKRA 2738
            G+ AG RV++G+VGA  AGKSTLA  +  A   +  +      + MDGY  +NS L        LG        KGAP T DA  ++  L  LR  +R  ET+  P + R + + V   +A+ P  R+VI EG +LL  +  W+ ++++     ++D++     +R+V R  A GR+ + +     + D P  + + + + RA
Sbjct:    9 GQGAGKRVVLGLVGAPGAGKSTLAAALQQAFADVSAV------LPMDGYHLANSELR------RLGRAGR----KGAPDTFDAAGYVALLQRLRDPARAGETVYAPEFRREIEEAVAGAIAIEPHHRLVITEGNYLLVDQGAWRGVASLLDECWYVDVDEQLRTDRLVRRHQAFGRTAQVAVQWAAQTDAPNAELVAQTRVRA 195
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BLAST of mRNA_H-paniculata_contig1515.3044.1 vs. uniprot
Match: UPI000A06BF86 (hypothetical protein n=1 Tax=Demequina sp. NBRC 110055 TaxID=1570344 RepID=UPI000A06BF86)

HSP 1 Score: 89.0 bits (219), Expect = 2.910e-16
Identity = 69/200 (34.50%), Postives = 99/200 (49.50%), Query Frame = 3 
Query: 2154 LVGMVGAAAAGKSTLAQLVCAACDVLLGIDKWGQCVSMDGYSFSNSHLLAQPATDHLGNECTLKDIKGAPSTLDAKAFLRDLLCLRSSSRGAETILLPAYSRVLHDPVPECVAVVPECRVVIVEGLHLLHVEDQWKKISNMFHRTVFLDIERSCCFERVVGRKVANGRSRESSEAHFWRVDGPIFDQLQEEKKRAHVVLT 2753
            ++G+ G   AGKSTLA  +    D   G       V +DG+ FSN+ L  +           L   KGAP T D  A +  L+ LR   R A T   PAYSR LH+PV + +AV    RVVIVEG +L  + D W+++  +     FLD+  +    R++ R+V  GR R  + A   RVD    + ++     A+ +LT
Sbjct:    4 VIGLAGPPGAGKSTLAARMA---DAAAGS---AVVVPIDGFHFSNAALELRG----------LAGRKGAPDTYDVDALVALLVRLREPGRDALTA--PAYSRDLHEPVKDAIAVPAGVRVVIVEGNYLGLLRDGWERVRPLLDDLWFLDVPWAVTRARLIARRVTTGRDRADAVAWVDRVDRANDEVIRATSPAANRLLT 185
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1515.3044.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRA7_ECTSI6.380e-10057.76PRK domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7K3B2A8_9ACTN2.270e-1934.45Nucleoside/nucleotide kinase family protein n=2 Ta... [more]
A0A1H0D1P0_9ACTN3.020e-1834.50Phosphoribulokinase / Uridine kinase family protei... [more]
G8RZA6_ACTS59.650e-1835.02Putative fructose transport system kinase n=1 Tax=... [more]
A0A8J3YL85_9ACTN1.190e-1733.17Nucleoside/nucleotide kinase family protein n=1 Ta... [more]
A0A3N1HR76_9ACTN4.840e-1733.77Uncharacterized protein n=1 Tax=Pseudokineococcus ... [more]
A0A3D1JE85_9CHLR1.090e-1626.21Uncharacterized protein n=1 Tax=Anaerolinea thermo... [more]
UPI001C4E7E901.520e-1633.33nucleoside/nucleotide kinase family protein n=1 Ta... [more]
UPI001821A1882.800e-1631.03Nucleoside/nucleotide kinase family protein n=1 Ta... [more]
UPI000A06BF862.910e-1634.50hypothetical protein n=1 Tax=Demequina sp. NBRC 11... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1515contigH-paniculata_contig1515:3879..9663 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score329.3
Seed ortholog evalue2e-87
Seed eggNOG ortholog2880.D7FRA7
Hectar predicted targeting categoryother localisation
EggNOG free text desc.uridine kinase
EggNOG OGsCOG1072@1,KOG2702@2759
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size4133
Cds size981
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1515.3044.1prot_H-paniculata_contig1515.3044.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1515 5777..8409 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929214.5142157-UTR-H-paniculata_contig1515:3878..57761622929214.5142157-UTR-H-paniculata_contig1515:3878..5776Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1515 3879..5776 +
1691480773.2245007-UTR-H-paniculata_contig1515:3878..57761691480773.2245007-UTR-H-paniculata_contig1515:3878..5776Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1515 3879..5776 +
1622929214.5609791-UTR-H-paniculata_contig1515:8409..96631622929214.5609791-UTR-H-paniculata_contig1515:8409..9663Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1515 8410..9663 +
1691480773.2707217-UTR-H-paniculata_contig1515:8409..96631691480773.2707217-UTR-H-paniculata_contig1515:8409..9663Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1515 8410..9663 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929214.525076-CDS-H-paniculata_contig1515:5776..60201622929214.525076-CDS-H-paniculata_contig1515:5776..6020Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1515 5777..6020 +
1691480773.2380152-CDS-H-paniculata_contig1515:5776..60201691480773.2380152-CDS-H-paniculata_contig1515:5776..6020Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1515 5777..6020 +
1622929214.5358367-CDS-H-paniculata_contig1515:6943..72591622929214.5358367-CDS-H-paniculata_contig1515:6943..7259Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1515 6944..7259 +
1691480773.2482827-CDS-H-paniculata_contig1515:6943..72591691480773.2482827-CDS-H-paniculata_contig1515:6943..7259Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1515 6944..7259 +
1622929214.5472136-CDS-H-paniculata_contig1515:7988..84091622929214.5472136-CDS-H-paniculata_contig1515:7988..8409Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1515 7989..8409 +
1691480773.262848-CDS-H-paniculata_contig1515:7988..84091691480773.262848-CDS-H-paniculata_contig1515:7988..8409Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1515 7989..8409 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1515.3044.1

>prot_H-paniculata_contig1515.3044.1 ID=prot_H-paniculata_contig1515.3044.1|Name=mRNA_H-paniculata_contig1515.3044.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=327bp
MALAKELTKMEAQSIGVSDVPSLEAAAVGKLREKVLKQGGLHVSLDCRNK
ILAISEVELDETILPLCSWLIGLVEAQGKAAGGRVLVGMVGAAAAGKSTL
AQLVCAACDVLLGIDKWGQCVSMDGYSFSNSHLLAQPATDHLGNECTLKD
IKGAPSTLDAKAFLRDLLCLRSSSRGAETILLPAYSRVLHDPVPECVAVV
PECRVVIVEGLHLLHVEDQWKKISNMFHRTVFLDIERSCCFERVVGRKVA
NGRSRESSEAHFWRVDGPIFDQLQEEKKRAHVVLTVRPNGHQALLISNVE
ARLTPITTKENAETKASLSPLPLAES*
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mRNA from alignment at H-paniculata_contig1515:3879..9663+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1515.3044.1 ID=mRNA_H-paniculata_contig1515.3044.1|Name=mRNA_H-paniculata_contig1515.3044.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5785bp|location=Sequence derived from alignment at H-paniculata_contig1515:3879..9663+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGAAGGGTTTTGGTAGGGGGCTAAACGTAACAATACGGAATACGCAAAA
AAAAATGTCGATTGAGGTAGCATCGTAAATTTTGGTGTGAATCATGACTA
ACCCGTTACCGTCATTATCCTTTCCGCCTTTCCCCAATTTTCCCATCTAG
CCTTCGCTCTTTGCGAGGTTTCGACCCCCAACTGTACGCTCGCCTCTAGA
TGCAGCCCTCATCGGGGGGGGGTGCGACGGCTGTATGTGCGATGTTGGTA
GGATGGTGGTGATCGATGACCGATGATGAGGCCCTGCATGCGCTACTGCC
AAGGTCTTCTGGCCACCGTACAGCTGGCGGTACCGTGATAGTCCTAGTCC
TACCGATGCAAAAAGAAGGGAGGGATATGGCTTACTTTCTTTTCCCACTG
TTGAAGAAATTTGGCTTGCCTTGACATATGTCGTTCAGACATGTCGCAGC
ATATCAGGAGAATTCTCGTCGACTGGGTTCGACCGTCTTTTGATGTCCCG
AGTATTGTGAACTCGTAAGTGGAATTGTTTTTTATTTTGCTTGACCAGTG
ATTGTTCGGGCCTGGGCATGGATGTTTCGTCAATTCGATATTGCTTCCTT
GTTTCACTACTGAAATTTGGGATCAGGAAGGGAGTGATAATGCGGCCATG
TGCGAACCATGAAATAGGTTGACCAGTGGCGACCTTTAGGACGTCATGTC
GCTCAGGTTTGTGTGGGTTTTTCATTGATAACCAACCCAGTCGTTTGTGG
TCACCTAGGGGATGTAACAAATAAGGGAAATTAGCTGAGGACCCTTGGGA
ACTAAACATGGTTTGAAGAAAAAATGGGAGACTGTGGGATAAAGTTTTTG
GAGCTTTGAGTTTGAACTTTCGGAATGTTGTCGGCCTATGTCGTACGTAT
TTTTTGCTGAGTCAGTATTACCTTCTTGACGAGGCGCTTTCCTTGATCTC
GTGTTTTTTCCCCAAGTCAATATTGCTAGTCTGGCGAAGGACTTTCCAGT
GCTTGGATATTTTGTTTTTTCGAGTCAGTTTTGCTTTCTGATTTGGTTGA
CTAGAACGCGCTACGCCTTATCGTTTTTTTATTGAGGCTTTTCTCGGGAA
CGCGATTCTTCCTTCGCGTTACCGGGATGATTGGCTGGGTATATGGTTTT
TTTTGCCGTCCCTAGCAAGTGGTGAGTCTCAGATGCAGATAACTAGGGAG
GCTATCCGATATTATGGGGTCAGTTTCTCCGTCTGGATCGTTAGATTCGG
GTATGGAGAATAGCCCAACAAACGTAGGTTCTTATTGGACCGCAAAGAGT
GTTCTACGAATATTGGCAGTGTTTTATTGTACTGAGTATGCCGTTGACTG
CGGATGCCCTTGGCTCTGTCTTCTTTCTCTCCACGTATCCATGTCTGGGT
ATTGTAGATTTGTAAAAATATCTGCCTGTCTTGAGTCGCATTGAGGTTGC
ATAAGTCTACGAAGTATCGATTAGACTCAAAACCTTATTTTTCACGAACA
GTACTGTTTCTCACTTTTATATGGAAGTTAGTATAAGTTCATAACTTGAA
CCCCATTTCTTCGGCTAAATTTCTTATGGGTTGGCAAAATGTGAGCCTCA
GTTTCTTATAGTTTGATTTCTCACGATCGGGCTAGGACTGTAGAAACGCG
GTAGAAACACCTCACACATTCCACCCATCTGGGGCAGGTGAAGTTCACAG
GTATGTTGCACATATATTTAGCGGTCTATCTTTTACCCAGTGATTCCGGG
TCTGAGAAGGAATATGCTTTGTCCCTCGTAGGTGGTGATGATGCTGGATG
TGATGCCGTCCTACCAGCCGCCAGGTGAAAGTAGAACAGAAATCATTTAG
TGGCTGGTGGGGAGACGTAAGACAAGTCCCAATTCCCCCTGATATGATAT
GGCTCTTGCCAAGGAGTTGACAAAAATGGAGGCTCAGTCAATCGGTGTGA
GCGATGTTCCGTCTCTTGAAGCAGCTGCGGTTGGCAAGCTGCGGGAAAAG
GTTCTGAAACAAGGCGGCCTGCATGTTTCACTTGACTGTCGTAATAAGAT
CTTGGCGATCAGCGAAGTCGAGCTCGATGAGACGATCCTCCCGCTTTGCT
CCTGGTTAATAGGGCTTGTGGAGGCCCAAGGCAAGGCTGCAGGTGAAGCT
TCACAGATGCAACATGATCGTGCTCGGTACGAACGAAATTTCAGTCAAAA
AGAAACAGGTATCAATCGTAGGCGTCATCTGTTCGCGAGATCTGGATGTC
GCGCATATATAGATACAGGCTTCTGCTGCCAAGCCTGTTGTCCAGGTCCT
GTCTGGAGTAGAGATTACCTCGCCTTTCTCTGTATAAAGTGAAAACCTAT
ACACGTGGCAAGCAAGTCCGTTGTCGCACACATTTACCTAGGGACGCAAA
GGCGAATGGGCGGGATATGCCATGCATACTGCTTGCTGTGTCGTGAAGAA
CCTAAAGATTCCGTATGATAGCTACTGTAAATTAGCTGGTGTTGCGTAAC
ACCCCCCCTCCCGTCCTGATGGATTTGCCGCCCTATGTTGTTACAACTAT
CTGGAGCGAGCCAAAATAGCATCTGTACTCGCAGCGTAAGAAAGGTCGCA
ACAATGAGATACTTTCAAAAATATGTACTCGGTATCTTCTCCCTCTTCCA
TATGATAAATTGTTGTACAAGTATATCGTTGCTATCGATAAATAATAAAG
GGTGTGTTGAGTTAACATTCGTAGGCTCTACGAGTATTCCGAATTTATCG
TGTTACCGTTGAGCATTGGAGGCTATTTCGCAACAAAAGCATGAATCTCT
GACGATAAAGTGTCTAGCGTTGCAATCGTTATGTGCGCAGGACTATGACA
ATCGCCTCTCTATGCTGTGCGTAATATCTGTACTGGACTAGCTGTCTGAA
CAGCGGAACCTCCTATCCGTAATTCATAGGCGTCGCTTTCCTCTGTTTTT
TCAGATCGGAAGTAGGAAGAGAATCTTTGGAGACCAGCACCTAGAAGGTG
GAAAATGACTATTATTCTGAATTGAAACGTGAAGTGATCCAACTGGTTGA
CGTCGATTCAAGCAGGGGGTCGAGTGTTGGTCGGGATGGTTGGTGCAGCG
GCAGCTGGGAAGTCAACGTTAGCCCAACTTGTTTGTGCGGCGTGCGATGT
TCTCCTTGGAATCGATAAGTGGGGTCAATGCGTCAGCATGGATGGCTACA
GTTTTTCTAACTCGCACCTGTTGGCACAGCCGGCGACGGATCACCTCGGC
AATGAGTGCACACTCAAGGATATCAAGGGTGCACCTAGTACATTGGATGC
AAAGGCCTTTCTGCGAGACTTGCTATGCTTGCGTTCTTCTTCTAGGGGTG
CAGAGACTATTCTTCTCCCTGCATACAGCAGGTACAAGGCCACGGCGCAT
GTTTAATATAAGTTTTGGAACCGCTGATTTTTGCGTTGTCTTGTAAGATT
TTCAGGGTGGTTGTGTATGTCATGGTGAACCCCACCTTCGAGGTGGGGTC
GGTCATAGATTTAGTGTCGATAGCTCGTCGCAACGTCCGAACTCTCAAGT
GTAGACCCTGCTCCTAAATCCTGATTTGTCCCTATCCGCTGTCTCTTGCC
AACTGGCCTAATCCCGATGTACCTCTTGCCCTGCCAATTGTCCGGACATG
GCGTCTGAAAAGTAAATAGTTAGGCACAACAGCTAGTGTTGTGATATTTA
ATCTGTCGAAGTGTAAGTGTGTTGCTTTCAACATACCCACCCCTACCTGG
TCGGCGTGTTGGGGAACCTCTCGCTATGATTTAAAGAATTGACGACAAAC
AGCATAATCTTGACGAAAGTCTTCGCAGGTACGATTTAGGTGCGTGTTCC
GGTTTGCGTTTTTTTTGTGCTTTGTGGGATGCAGAGCATTGCCGACTTTG
TACGGCATTTGTCGGCTTTGCAGTGTATAAAAACGTGGCGAAAACAAAGG
ACTACCGTAGACCTTTTTGACACTGATACGTGAATCCATCTGAGGGTGTG
TTGTTTCGCAATTCCTTTCGATTTGATATTCACCCAGACGGTACTCACAT
TCATCATTGAAACGCGATACGTGAGCTCACATGTTGTGTTGTTGTCTGTT
TTTTCAACAGAGTCCTTCATGATCCAGTACCAGAGTGCGTAGCTGTTGTA
CCGGAGTGCAGGGTGGTTATCGTGGAAGGGCTACATCTTCTGCACGTCGA
GGATCAATGGAAGAAAATTTCCAATATGTTCCACCGCACGGTGTTCCTAG
ATATCGAGCGTTCGTGTTGCTTTGAGAGAGTGGTCGGCCGGAAGGTGGCC
AACGGGCGATCCCGCGAGAGCTCTGAGGCCCACTTTTGGCGTGTCGATGG
CCCCATCTTTGACCAGCTGCAGGAAGAGAAGAAGCGTGCTCATGTAGTGT
TGACCGTGCGTCCAAACGGGCACCAAGCTCTTTTAATTTCCAATGTTGAG
GCACGGCTCACACCTATAACCACCAAAGAAAACGCTGAAACCAAAGCTTC
CTTGTCACCCCTACCCTTGGCTGAAAGTTAGCACTGATAATCAGCAGCTT
TATCTCGTAGAGTATGTATCGAGCGCTCAGTACAAGGGCAAGATATTTGC
GATGTTTTGTGTTGCCCTATTTTCTTGTACGATAGGCCGTGTTAGAGTCT
TGGCCATGGTGTATGATAGAGCCAGCCACATTGCTGTCGGCCGAGAGAAG
GCCCGCTCTCGAAAAAAATCCCTCGAAGATGAAGTACGTATGCACCACTC
ATTAGGGCATGTACAGCTGTGTCATATCTGTCGTCGGTGGATAAATCTTC
CCAAGACTGTTGAAACGTTATTATCCCAAGCGGTATAAAGGAGAGAGACT
GTAGAGACAAACATGGCAAAGAGCTCTATATTGTGTATGGTATGATGGTG
TACTACTACTTTGGAAGCCATCAGGGGTACAGTGATTACCTATGGTGGTA
CCTAGAGGTGAACGTGGTGTAGACACTATGTGTTCGAGCCTCGATGGCGG
TCGTTTTCGAGCCAATAATTTACGAATTATTCAAATGAACTGTCGGGGTA
GAGGCGGGGAGGTACGGTAGCACCACTGTAAATATACTCGTGTCTAGACT
GAAACGTAGACTATTGATTACTGCATCAGCGATCATGGATTGAGGCAATA
TTATCGCCCGTTGGGCGTGTTAATATCATATGTGTTCTATGCGTGGTGCT
GGGTTAGCTGGAGCTGCCTACACTAATAGCTCTGTGCTCTTTGCTAAAGC
GTTGTGAGTTACAGATAGCAATTAGACTATTGTAGTAGCCCATATAGTGC
CTGTTCGCGCGACAAGTCGTGGTACTTGGGTCATGATGTGGGGGGACAAG
ACGTACGTAATGCGATCGGTGTCATGTTGGGTTACTAGGCAGCGTACGCA
AACGTGTTTCAAGTCCGTTCAAAATTAAGGTCACCTGGTGGGCATGGGTG
GGTGGTTGTGGATGAGTTGTAGCAGTGGTAATAGAAGAGTAAGCACTTGT
TCGTGCACAAGTCTCAGCGTAATGTACTCCAAGATCTCTATCGAAACGGA
GGCGGCTAGGCACCAGGCAATCAATGCCTAGCACTCCAAAACTTTGGTAC
ACTATTCGTATGGGGGGCTGTACAATGAACGCGTCTTTTATCCCGCATTT
GCTTTCCGGTGTGTCATGCTCGCATGCTTCAATGGCTGTCTCGCAAATTT
CGTGGTTTCGACTGTACTTGTTTGTATTTTAAAATACCTCCCGTAATACG
ATTGTCATCCATCGGATGGTGTACCGATATCGAAA
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Coding sequence (CDS) from alignment at H-paniculata_contig1515:3879..9663+

>mRNA_H-paniculata_contig1515.3044.1 ID=mRNA_H-paniculata_contig1515.3044.1|Name=mRNA_H-paniculata_contig1515.3044.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1962bp|location=Sequence derived from alignment at H-paniculata_contig1515:3879..9663+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCTCTTGCCAAGGAGTTGACAAAAATGGAGGCTCAGTCAATCGGTGT
GAGCGATGTTCCGTCTCTTGAAGCAGCTGCGGTTGGCAAGCTGCGGGAAA
AGGTTCTGAAACAAGGCGGCCTGCATGTTTCACTTGACTGTCGTAATAAG
ATCTTGGCGATCAGCGAAGTCGAGCTCGATGAGACGATCCTCCCGCTTTG
CTCCTGGTTAATAGGGCTTGTGGAGGCCCAAGGCAAGGCTGCAGATGGCT
CTTGCCAAGGAGTTGACAAAAATGGAGGCTCAGTCAATCGGTGTGAGCGA
TGTTCCGTCTCTTGAAGCAGCTGCGGTTGGCAAGCTGCGGGAAAAGGTTC
TGAAACAAGGCGGCCTGCATGTTTCACTTGACTGTCGTAATAAGATCTTG
GCGATCAGCGAAGTCGAGCTCGATGAGACGATCCTCCCGCTTTGCTCCTG
GTTAATAGGGCTTGTGGAGGCCCAAGGCAAGGCTGCAGGGGGTCGAGTGT
TGGTCGGGATGGTTGGTGCAGCGGCAGCTGGGAAGTCAACGTTAGCCCAA
CTTGTTTGTGCGGCGTGCGATGTTCTCCTTGGAATCGATAAGTGGGGTCA
ATGCGTCAGCATGGATGGCTACAGTTTTTCTAACTCGCACCTGTTGGCAC
AGCCGGCGACGGATCACCTCGGCAATGAGTGCACACTCAAGGATATCAAG
GGTGCACCTAGTACATTGGATGCAAAGGCCTTTCTGCGAGACTTGCTATG
CTTGCGTTCTTCTTCTAGGGGTGCAGAGACTATTCTTCTCCCTGCATACA
GCAGGGGGTCGAGTGTTGGTCGGGATGGTTGGTGCAGCGGCAGCTGGGAA
GTCAACGTTAGCCCAACTTGTTTGTGCGGCGTGCGATGTTCTCCTTGGAA
TCGATAAGTGGGGTCAATGCGTCAGCATGGATGGCTACAGTTTTTCTAAC
TCGCACCTGTTGGCACAGCCGGCGACGGATCACCTCGGCAATGAGTGCAC
ACTCAAGGATATCAAGGGTGCACCTAGTACATTGGATGCAAAGGCCTTTC
TGCGAGACTTGCTATGCTTGCGTTCTTCTTCTAGGGGTGCAGAGACTATT
CTTCTCCCTGCATACAGCAGAGTCCTTCATGATCCAGTACCAGAGTGCGT
AGCTGTTGTACCGGAGTGCAGGGTGGTTATCGTGGAAGGGCTACATCTTC
TGCACGTCGAGGATCAATGGAAGAAAATTTCCAATATGTTCCACCGCACG
GTGTTCCTAGATATCGAGCGTTCGTGTTGCTTTGAGAGAGTGGTCGGCCG
GAAGGTGGCCAACGGGCGATCCCGCGAGAGCTCTGAGGCCCACTTTTGGC
GTGTCGATGGCCCCATCTTTGACCAGCTGCAGGAAGAGAAGAAGCGTGCT
CATGTAGTGTTGACCGTGCGTCCAAACGGGCACCAAGCTCTTTTAATTTC
CAATGTTGAGGCACGGCTCACACCTATAACCACCAAAGAAAACGCTGAAA
CCAAAGCTTCCTTGTCACCCCTACCCTTGGCTGAAAGTTAGAGTCCTTCA
TGATCCAGTACCAGAGTGCGTAGCTGTTGTACCGGAGTGCAGGGTGGTTA
TCGTGGAAGGGCTACATCTTCTGCACGTCGAGGATCAATGGAAGAAAATT
TCCAATATGTTCCACCGCACGGTGTTCCTAGATATCGAGCGTTCGTGTTG
CTTTGAGAGAGTGGTCGGCCGGAAGGTGGCCAACGGGCGATCCCGCGAGA
GCTCTGAGGCCCACTTTTGGCGTGTCGATGGCCCCATCTTTGACCAGCTG
CAGGAAGAGAAGAAGCGTGCTCATGTAGTGTTGACCGTGCGTCCAAACGG
GCACCAAGCTCTTTTAATTTCCAATGTTGAGGCACGGCTCACACCTATAA
CCACCAAAGAAAACGCTGAAACCAAAGCTTCCTTGTCACCCCTACCCTTG
GCTGAAAGTTAG
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