mRNA_H-paniculata_contig15130.3036.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig15130.3036.1 vs. uniprot
Match: D7G2L3_ECTSI (RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2L3_ECTSI) HSP 1 Score: 160 bits (405), Expect = 2.680e-44 Identity = 76/82 (92.68%), Postives = 80/82 (97.56%), Query Frame = 1 Query: 1 NALRWGVDVVVGTPGRLLDHVGKGTLQLSEAEFIILDEADQMLDMGFKEEMEKVFTACGEPGERGRQMLLFSATMPPWVDKV 246 +ALRWGVDVVVGTPGRLLDHVG+GTLQLS+AEFIILDEADQMLDMGFKEEMEKVF ACGE GE+GRQMLLFSATMPPWVDKV Sbjct: 265 DALRWGVDVVVGTPGRLLDHVGRGTLQLSDAEFIILDEADQMLDMGFKEEMEKVFEACGEEGEQGRQMLLFSATMPPWVDKV 346
BLAST of mRNA_H-paniculata_contig15130.3036.1 vs. uniprot
Match: K8YSG2_NANGC (RNA helicase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YSG2_NANGC) HSP 1 Score: 113 bits (282), Expect = 2.490e-27 Identity = 53/82 (64.63%), Postives = 66/82 (80.49%), Query Frame = 1 Query: 1 NALRWGVDVVVGTPGRLLDHVGKGTLQLSEAEFIILDEADQMLDMGFKEEMEKVFTACGEPGERGRQMLLFSATMPPWVDKV 246 ALR GV VVVGTPGR+LDH+ +GTL+LS F+ILDEAD MLDMGFK++++KV A G+ + RQ+LLFSAT+PPWV KV Sbjct: 258 EALRRGVQVVVGTPGRILDHIERGTLKLSGLRFLILDEADSMLDMGFKDDIQKVCDAMGQDSHQRRQVLLFSATLPPWVQKV 339
BLAST of mRNA_H-paniculata_contig15130.3036.1 vs. uniprot
Match: A0A8J2SD65_9STRA (RNA helicase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SD65_9STRA) HSP 1 Score: 109 bits (273), Expect = 4.010e-26 Identity = 53/82 (64.63%), Postives = 67/82 (81.71%), Query Frame = 1 Query: 1 NALRWGVDVVVGTPGRLLDHVGKGTLQLSEAEFIILDEADQMLDMGFKEEMEKVFTACGEPGERGRQMLLFSATMPPWVDKV 246 +ALR GVDVVVGTPGR +D + K LQLS+ +F +LDEADQMLDMGFK+E+EK+F A G+ +R Q+LLFSAT+PPWV K+ Sbjct: 217 DALRRGVDVVVGTPGRTMDLIEKQVLQLSQLKFAVLDEADQMLDMGFKDELEKIFAAMGKTVDR--QLLLFSATLPPWVKKI 296
BLAST of mRNA_H-paniculata_contig15130.3036.1 vs. uniprot
Match: A0A2T9Y7Q7_9FUNG (RNA helicase n=1 Tax=Furculomyces boomerangus TaxID=61424 RepID=A0A2T9Y7Q7_9FUNG) HSP 1 Score: 108 bits (270), Expect = 1.080e-25 Identity = 52/83 (62.65%), Postives = 65/83 (78.31%), Query Frame = 1 Query: 1 NALRWGVDVVVGTPGRLLDHVGKGTLQLSEAEFIILDEADQMLDMGFKEEMEKVFTACGEPGERGR-QMLLFSATMPPWVDKV 246 N+LR G+D+VVGTPGR+LDH+ +GTL L EF+ LDEADQMLD+GFKE+ME+V GE G+ Q+LLFSAT+P WV KV Sbjct: 1665 NSLRKGLDIVVGTPGRILDHLSRGTLSLKSTEFVCLDEADQMLDIGFKEDMEQVLKTLGEHRPSGKKQILLFSATIPTWVAKV 1747
BLAST of mRNA_H-paniculata_contig15130.3036.1 vs. uniprot
Match: A0A836CJP1_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJP1_9STRA) HSP 1 Score: 107 bits (266), Expect = 3.590e-25 Identity = 55/86 (63.95%), Postives = 65/86 (75.58%), Query Frame = 1 Query: 1 NALRWGVDVVVGTPGRLLDHVGKGTLQLSEAEFIILDEADQMLDMGFKEEMEKVFTAC-GEPGERGR---QMLLFSATMPPWVDKV 246 ALR GVD+VVGTPGR++D + +GTL+L + ++ ILDEADQMLDMGFKEEMEKVF C GE R Q LLFSATMP WV +V Sbjct: 258 EALRRGVDIVVGTPGRIIDMMDRGTLKLDQTDYFILDEADQMLDMGFKEEMEKVFAQCRGEADGAERREVQTLLFSATMPEWVQRV 343
BLAST of mRNA_H-paniculata_contig15130.3036.1 vs. uniprot
Match: F0Y727_AURAN (RNA helicase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y727_AURAN) HSP 1 Score: 106 bits (264), Expect = 6.120e-25 Identity = 52/84 (61.90%), Postives = 62/84 (73.81%), Query Frame = 1 Query: 1 NALRWGVDVVVGTPGRLLDHVGKGTLQLSEAEFIILDEADQMLDMGFKEEMEKVFTACGEPGE--RGRQMLLFSATMPPWVDKV 246 +ALR GVDVVVGTPGR +D + KG L S F +LDEADQMLDMGFK+E+EK+F A G R RQ+LLFSAT+PPWV + Sbjct: 116 DALRRGVDVVVGTPGRTMDLIEKGVLDASALSFAVLDEADQMLDMGFKDELEKIFAAMAPAGAPARARQLLLFSATLPPWVRNI 199
BLAST of mRNA_H-paniculata_contig15130.3036.1 vs. uniprot
Match: A0A2T9Y8X1_9FUNG (RNA helicase n=1 Tax=Smittium simulii TaxID=133385 RepID=A0A2T9Y8X1_9FUNG) HSP 1 Score: 104 bits (260), Expect = 2.350e-24 Identity = 49/83 (59.04%), Postives = 66/83 (79.52%), Query Frame = 1 Query: 1 NALRWGVDVVVGTPGRLLDHVGKGTLQLSEAEFIILDEADQMLDMGFKEEMEKVFTACGEPGERGR-QMLLFSATMPPWVDKV 246 N+LR G+D++VGTPGRLLDH+ +G+L L+ EF+ LDEADQMLD+GFKE+ME+ A E + G+ Q+LLFSAT+P WV+ V Sbjct: 233 NSLRRGLDILVGTPGRLLDHLNRGSLSLAATEFVCLDEADQMLDIGFKEDMEQTLKALKEQSKSGKFQVLLFSATVPEWVNNV 315
BLAST of mRNA_H-paniculata_contig15130.3036.1 vs. uniprot
Match: A0A7S2KT23_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KT23_9STRA) HSP 1 Score: 101 bits (252), Expect = 3.840e-24 Identity = 44/82 (53.66%), Postives = 61/82 (74.39%), Query Frame = 1 Query: 1 NALRWGVDVVVGTPGRLLDHVGKGTLQLSEAEFIILDEADQMLDMGFKEEMEKVFTACGEPGERGRQMLLFSATMPPWVDKV 246 ALR GVDVVVGTPGR++DH+ +G L L+E ++LDEAD+ML+MGF E++E + G+ ++ Q LLFSAT PPWV ++ Sbjct: 159 RALRQGVDVVVGTPGRIMDHLDRGNLNLAECNVVVLDEADEMLNMGFAEDVEVILEGAGDENDKKMQCLLFSATTPPWVKQI 240
BLAST of mRNA_H-paniculata_contig15130.3036.1 vs. uniprot
Match: T0YIA1_9ZZZZ (DEAD/DEAH box helicase domain protein (Fragment) n=1 Tax=mine drainage metagenome TaxID=410659 RepID=T0YIA1_9ZZZZ) HSP 1 Score: 97.4 bits (241), Expect = 5.860e-24 Identity = 48/82 (58.54%), Postives = 63/82 (76.83%), Query Frame = 1 Query: 1 NALRWGVDVVVGTPGRLLDHVGKGTLQLSEAEFIILDEADQMLDMGFKEEMEKVFTACGEPGERGRQMLLFSATMPPWVDKV 246 ALR GV +V+GTPGRLLDH+G+GTL LS ++LDEAD+MLDMGF E++EK+F A P ER Q +LFSAT PP ++++ Sbjct: 72 RALRMGVPIVIGTPGRLLDHLGRGTLDLSRLRTLVLDEADEMLDMGFIEDIEKLFAAA--PPER--QTMLFSATFPPEIERL 149
BLAST of mRNA_H-paniculata_contig15130.3036.1 vs. uniprot
Match: A0A7S1B3X5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B3X5_9STRA) HSP 1 Score: 102 bits (253), Expect = 2.080e-23 Identity = 48/82 (58.54%), Postives = 61/82 (74.39%), Query Frame = 1 Query: 1 NALRWGVDVVVGTPGRLLDHVGKGTLQLSEAEFIILDEADQMLDMGFKEEMEKVFTACGEPGERGRQMLLFSATMPPWVDKV 246 ALR G DVVVGTPGRL+DH+ +G L LS+ + ILDEAD+ML+MGF EE+E+V GE E Q+L+FSAT PPWV ++ Sbjct: 230 RALRRGTDVVVGTPGRLIDHIERGNLDLSKVQTAILDEADEMLNMGFAEEVERVLEGAGEALEDKTQVLMFSATTPPWVTEI 311 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15130.3036.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15130.3036.1 >prot_H-paniculata_contig15130.3036.1 ID=prot_H-paniculata_contig15130.3036.1|Name=mRNA_H-paniculata_contig15130.3036.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=83bp NALRWGVDVVVGTPGRLLDHVGKGTLQLSEAEFIILDEADQMLDMGFKEEback to top mRNA from alignment at H-paniculata_contig15130:1012..2164- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15130.3036.1 ID=mRNA_H-paniculata_contig15130.3036.1|Name=mRNA_H-paniculata_contig15130.3036.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1153bp|location=Sequence derived from alignment at H-paniculata_contig15130:1012..2164- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15130:1012..2164- >mRNA_H-paniculata_contig15130.3036.1 ID=mRNA_H-paniculata_contig15130.3036.1|Name=mRNA_H-paniculata_contig15130.3036.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=498bp|location=Sequence derived from alignment at H-paniculata_contig15130:1012..2164- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |