mRNA_H-paniculata_contig15120.3032.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig15120.3032.1 vs. uniprot
Match: A0A2N9G413_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9G413_FAGSY) HSP 1 Score: 212 bits (539), Expect = 1.820e-55 Identity = 197/667 (29.54%), Postives = 297/667 (44.53%), Query Frame = 1 Query: 1 IKCRRSDQGGEYTGKPFRQFCAENGIKWEFSAAYTPQQNGVAERSWRNIFEMARANMITANMGRRYWVEAVRSSVYCLNRAPTRPHDGGTPYEKGHGETPKLDHLRVFGCTVYVILFPAPPITPAVTRSRAQGEQA-----GGTKTED--RTSASEMPPILSTHSLPAASANPFNVFSDGDDGENNGDTKMKDAEPSVKDAPSAGTAAPASRGNTRKQSGTEAQRPRDRPPIRTRARARENREEDPGATARVAKMNGTGNLTEVSKGKPKSAAEALASPETGKWRAAMEEEWGALVKNGTWKSEDLGRLPAGRKAIRTNWIFKRKLKKDGSVARYKARLVAQGFPQVEGGEVFETSAPGARMSTLCTVFSLAAEHDFELEDMDVDAAYLNAPVE*ELFVKLPPEFS-----------------------------------------PFSRDIPFRH--GRITHVRLDRN*TWYSIRGKSSST-----LYGGSMSRRLQYMQAHISLSQYCD*LRHY---VRR*E*WSRSGRTL*CRLGGRCRGPKVHNRICFQAERGARRWRSRKQQLVTWSSTEAKYVAAGEAGKEAVYLRELLGSIGFGCRGSTTLFEDNK*AINLSKGSDAHCRTKHIGVRWHGIREWIREGILSLKYVQAGDQLADILTKGL 1827 IK RSD GGEY K F+ F A G+ + S PQQNGVAER R+I EMARA + AN+ + +W EA + V+ +NR PT D +P EK HG PK + L++FGCT YV+L P S+ + G ++T+ R E L T+S P P + T+ P + T P + R +R R D R++ + L+ P+S +A E+ KW AM+EE AL N TW D+ LP + + + W++ KLK DGS+ RYKARLVAQGF Q G + ET AP A+M+T+ T+ +++A D+++ MDV A+LN + ++++ PP S P + +R G + ++ + R ++++ S L+ ++ R ++Y+++ L L +Y + + + +S + GG + C W+S+KQ V+ SSTEA+Y A E V+LR LL G T LF DN+ A+ ++ H RTKHI + H +RE +GI++L +V DQ+ADILTK L Sbjct: 235 IKILRSDSGGEYIPKEFKAFLASEGVVHQCSCTEQPQQNGVAERKHRHIQEMARALRLHANLPKVFWAEAANTVVFLINRLPTPLLDNVSPLEKLHGYPPKYNLLKIFGCTCYVLL-------PKTEYSKLDAKSVKCIFLGYSETQKGYRCYDWEAKKPLLTYSRRVQHPPPM--------------------------PPPSXTSTPGNVSXXXXXXXT--------PQLSLRRSSRIIRPPD-----RLSLFSALDPLSI-----PRSYKQAA---ESAKWIQAMKEEMDALEANETW---DIVPLPTNQPVVGSKWVYSVKLKSDGSLDRYKARLVAQGFSQEYGIDYDETFAPVAKMTTVRTLIAISAIRDWDIFQMDVKNAFLNGDLSETVYMRPPPGSSYCLSSYGLQITQSTIWPKTSTSSVVDTPLEVNVKYSKNDGEPITDPTLYRRVVGSLVYLTVTRPDIAHAVQLVSQFVSDPRRLHLTALHRIIRYLRSTSDLG-----LPYYKSALPQLQAYSDAD------YGGCPDTRRSTTGYCSFLGSSLLSWKSKKQPTVSKSSTEAEYRAMSAVCSEIVWLRRLLADFGMTPSIPTPLFCDNESAVKIASNPVFHERTKHIEIDCHFVREKFEQGIITLPHVSTKDQIADILTKSL 833
BLAST of mRNA_H-paniculata_contig15120.3032.1 vs. uniprot
Match: A0A4C1T256_EUMVA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1T256_EUMVA) HSP 1 Score: 206 bits (523), Expect = 1.030e-52 Identity = 192/673 (28.53%), Postives = 298/673 (44.28%), Query Frame = 1 Query: 1 IKCRRSDQGGEYTGKPFRQFCAENGIKWEFSAAYTPQQNGVAERSWRNIFEMARANMITANMGRRYWVEAVRSSVYCLNRAPTRPHDGGTPYEKGHGETPKLDHLRVFGCTVYVILFPAPPITPAVTRSR-----AQGEQAGGTKTEDRTSASEMPPILSTHSLPAASANPFNVFSDGDDGENNGDTKMKDAEPSVKDAPSAGTAAPASRGNTRKQSGTEAQRPRDRPPIRTRARARENREEDPGATARVAKMNGTGNLTEVSKGKPKSAAEALASPETGKWRAAMEEEWGALVKNGTWKSEDLGRLPAGRKAIRTNWIFKRKLKKDGSVARYKARLVAQGFPQVEGGEVFETSAPGARMSTLCTVFSLAAEHDFELEDMDVDAAYLNAPVE*ELFVKLPPEFS----------------------------------PFSRDIPFRHGRITHVRLDRN*TWYSIRGKSSSTLYGG--------SMSRRLQYMQAHI------------SLSQYCD*LRHYVRR*E*WSRSGRTL*CRLGGRCRGPKVHNRICFQAERGARRWRSRKQQLVTWSSTEAKYVAAGEAGKEAVYLRELLGSIGFGCRGSTT---LFEDNK*AINLSKGSDAHCRTKHIGVRWHGIREWIREGILSLKYVQAGDQLADILTKGLRR 1833 IK RSD G EY+ K F F NGI S YTPQQNG++ER R + E A+ M A++ + YW +AV ++ Y +NR+PT TP+E G+ P L ++R+FGC V + P +SR E G + D A++ H L N N S+ D + +T + PSV +P+ T I+TR R R+ + + ++ + MNG + + P+S EAL S E+ KW+ AM+EE+ +L+ N TW D LP G+K I W+FKRK G + RYKARLV +G+ Q +G + E AP R +++ + +AA+++ E+ MD A+L V+ ++++ PP F R++P++ + L + +S + Y G ++ R +Y++A I +++ YCD W+ C G F + A W S+KQ + SSTEA+Y + A +EA++ ++L + S ++ DN+ AI + H R+KHIGVR+H IRE I + + +KY ++ D ADILTKGL R Sbjct: 510 IKILRSDNGLEYSNKNFADFLKNNGILHHTSNPYTPQQNGLSERMNRTLVERAKCMMFNADLSKSYWAKAVTTAAYIINRSPTHALSDITPHEVWTGQKPDLSNIRIFGCPAMVHI-PKEKRQKLDMKSRQLIFVGYSECTKGYRFMDP-KANKAVISRDVHFL---EENIKNTSSNTDYEDPLDETYLPS--PSVNISPANETG------------------------IKTR-RQRKLQTNNESSSLYIC-MNGE-FTSSLLNNDPQSLEEALQSNESEKWKQAMKEEYESLIHNNTWSLVD---LPGGKKGIPCKWVFKRKFDHTGKITRYKARLVIKGYKQKKGIDYNEIYAPVVRYTSIRYLIDIAAKYNLEIHQMDAITAFLQGDVDEDIYMSQPPTFDREEKILTRFGMDDCKPVWTPCDPNTQLKRAESEEEILRNVPYQEAIGCLLYLSQGTRPDITYIVNSLSRYNGQPTAEHWTTLKRVFRYLKATIDYKLTYHGNSEGNITGYCD---------ADWASHSEDR-----RSCTG------YVFILQGAAISWCSKKQLTIALSSTEAEYTSLATAVQEAIWQKQLDED--YWPESSAVPIVVYCDNQSAIRILDSESYHQRSKHIGVRYHFIRERIADKQVLVKYQRSQDMTADILTKGLHR 1123
BLAST of mRNA_H-paniculata_contig15120.3032.1 vs. uniprot
Match: A0A2N9GWV7_FAGSY (Integrase catalytic domain-containing protein n=3 Tax=fabids TaxID=91835 RepID=A0A2N9GWV7_FAGSY) HSP 1 Score: 205 bits (522), Expect = 1.370e-52 Identity = 199/699 (28.47%), Postives = 306/699 (43.78%), Query Frame = 1 Query: 1 IKCRRSDQGGEYTGKPFRQFCAENGIKWEFSAAYTPQQNGVAERSWRNIFEMARANMITANMGRRYWVEAVRSSVYCLNRAPTRPHDGGTPYEKGHGETPKLDHLRVFGCTVYVILFPAPPITPAVTRS-----RAQGEQAGGTKTEDRTSASEMPPILSTHSLPAASANPFNVFSDGDDGENNGDTKMKDAEPSVKDAP----------SAGTAAPASRGNTRKQSGTEAQRPRDRPPIRTRARARENREEDPGATARVAKMNGTG------NLTEVSKGKPKSAAEALASPETGKWRAAMEEEWGALVKNGTWKSEDLGRLPAGRKAIRTNWIFKRKLKKDGSVARYKARLVAQGFPQVEGGEVFETSAPGARMSTLCTVFSLAAEHDFELEDMDVDAAYLNAPVE*ELFVKLPPEFSPF-SRDIPFR-HGRITHVR------------------LDRN*TWYSIRGK-----------------SSSTLYGGSMSR-----------------RLQYMQAHISLSQYCD*LRHYVRR*E*WSRSG-----RTL*CRLGGRCRGPKVHNRICFQAERGARRWRSRKQQLVTWSSTEAKYVAAGEAGKEAVYLRELLGSIGFGCRGSTTLFEDNK*AINLSKGSDAHCRTKHIGVRWHGIREWIREGILSLKYVQAGDQLADILTKGLRRVQFQRLKK 1857 +KC R+D+GGE+ F FC ++GIK + +AAYTPQQNGVAER R + M + + N+ + +W E V ++Y LNR PT TP E G P +DH RVFGC +V FP T RS E++ G + D + ++ + + +F + E D + E V D G + +R NT + E + R R R++RE P T ++G G ++ V P EA+ S WR AM E ++ KN TW L LPAG K I W++K K + G + +YKARLVA+G+ Q G + E AP ARM T+ + +LAA+ ++ + +DV +A+L+ + E++V+ P + S + ++ H ++ +R L ++ Y + K S + G +SR L Y+ A + L + + + G G K + F A W S+KQ +VT S+TEA++VAA + V+++ +L +G G TT+ DN I LSK H R+KHI VR+H +R +EG + L + + DQ+ADI+TK L+ FQ+L+K Sbjct: 455 VKCLRTDRGGEFNSNEFNDFCKQSGIKRQLTAAYTPQQNGVAERKNRTVMNMVCSMLSDKNIPKTFWPEVVNWTIYVLNRCPTLAVKDVTPEEVWSGVKPSIDHFRVFGCIAHVH-FPEERRTKLDNRSITCVLLGVSEESKGYRLFDPVAKR----VVVSRDV---------IFEE----EKQWDWDVSYEEQIVVDLEWGDXXXXXXXEGGVSENGNRENTDVEGVREEEDGSSEGEERVRE-LRQSRERQP-PTWMGDYVSGEGLFEDEVHMALVESTDPLYFEEAVKSAN---WRLAMNSEIKSIEKNQTWT---LTELPAGAKRIGVKWVYKTKYNEHGKIDKYKARLVAKGYSQKYGVDYTEVFAPVARMDTVRMIIALAAQKNWTIFQLDVKSAFLHGELSEEVYVEQPRGYEKKGSEHLVYKLHKALSMLREFDMSDLGKMRFFLGIEVLQKSDGIYICQRKYALEILRRFGMMESNSVGSPIVPGFKISRDENGDFVDETYYKQLVGSLMYLTATRPDMMFVTFLIRTMNYGIHYKKGGDGELLAFTDSDYAGDMENRKSTSGYVFLMSSSAVSWCSKKQPIVTLSTTEAEFVAAAVCACQGVWMKRILKELGHSDGGCTTVMCDNSSTIKLSKNPVMHGRSKHIDVRFHFLRNLTKEGTIELVHCGSQDQVADIMTKPLKLEAFQKLRK 1127
BLAST of mRNA_H-paniculata_contig15120.3032.1 vs. uniprot
Match: A0A2Z6PCB3_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6PCB3_TRISU) HSP 1 Score: 203 bits (517), Expect = 6.590e-52 Identity = 188/640 (29.38%), Postives = 290/640 (45.31%), Query Frame = 1 Query: 1 IKCRRSDQGGEYTGKPFRQFCAENGIKWEFSAAYTPQQNGVAERSWRNIFEMARANMITANMGRRYWVEAVRSSVYCLNRAPTRPHDGGTPYEKGHGETPKLDHLRVFGCTVYVILFPAPPIT------PAVTRSRAQGEQAGGTKTEDRTSASEMPPILSTHSLPAASANPFNVFSDGDDGENNGDTKMKDAEPSVKDAPSAGTAAPASRGNTRKQSGTEAQRPRDRPPIRTRARARENREEDPGATARVAKMNGTGNLTEVSKGKPKSAAEALASPETGKWRAAMEEEWGALVKNGTWKSEDLGRLPAGRKAIRTNWIFKRKLKKDGSVARYKARLVAQGFPQVEGGEVFETSAPGARMSTLCTVFSLAAEHDFELEDMDVDAAYLNAPVE*ELFVKLPPEFSPFSRDIPFRHGRITHVRLDRN*TWYSI--------RGKSSSTLYGGSMSRRLQYMQAHISLSQYCD*LRHYVRR*E*WSRSGRTL*CRLGGRCRGP---KVHNR-----ICFQAERGARRWRSRKQQLVTWSSTEAKYVAAGEAGKEAVYLRELLGSIGFGCRGSTTLFEDNK*AINLSKGSDAHCRTKHIGVRWHGIREWIREGILSLKYVQAGDQLADILTKGLRRVQFQRLK 1854 +K R++ GGEY F + C GI E YTPQQNG AE R I M R + ++ + W EA+ ++ Y LN PT+ +G TP E P + HLRVFG Y + P + A+T GG K D + + ++ + + VF + + + N K +++ NT T+ +R RTRA +E + V +L +++ +P AL S KWR AM+EE ++ N TW+ D LP ++AI W++K K+ G V R+KARLVA+GF Q EG + E AP RM T+ V +A +D+ + MDV +A+LN P+E E+FV PP + G + ++ R YS+ + KSS + ++ R L+Y++ I + + + R C+L G V +R F W S+K+ +V SS EA+Y+AA +A++LR L+ I + TL DN AINL+K AH R+KHI +R+H +RE + L+L+Y ++ +Q+AD+ TK + FQ+L+ Sbjct: 604 LKVLRTNGGGEYVSHDFAELCESEGIVHEVIPPYTPQQNGSAEMRNRTIMNMVRCMLKGKHLPKELWGEAIATATYILNLCPTKRLNGITPEECWSKNKPSVKHLRVFGSIAYKHV---PDQSRRKLDDKAITMILVGYHSTGGYKLYDPVNKN----VVVSRDV---------VFDEMKEWDWNMQEKKSSTSVMLEELEE----------NTEIVPETDMRRS-----TRTRALPARLQECELNKDDEVINDGDLVHLAFMAELEPIDVISALKSE---KWRCAMKEELDSIKSNQTWELVD---LPQNKRAIDVKWVYKLKMNSKGEVTRHKARLVARGFLQKEGIDYGEVFAPVTRMETIRLVTVIANINDWPMYQMDVKSAFLNGPIEEEVFVTQPPGYELI--------GSLRYLCNTRPDLAYSVGIVSRFMDKPKSSHLI---AVKRILRYVKGTIDYGVF-------------FPANDRKNECKLMGYTDSNWCGDVEDRKSTAGYIFYFGEAPISWCSKKEPVVALSSCEAEYIAASLRTCQAIWLRNLIEEISLVKCNTVTLKVDNVSAINLAKNPIAHGRSKHIEMRFHYLREQVNNENLTLEYCKSDEQVADLFTKAVAVQVFQKLR 1182
BLAST of mRNA_H-paniculata_contig15120.3032.1 vs. uniprot
Match: A0A2Z6P3P6_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6P3P6_TRISU) HSP 1 Score: 201 bits (512), Expect = 2.900e-51 Identity = 185/690 (26.81%), Postives = 298/690 (43.19%), Query Frame = 1 Query: 1 IKCRRSDQGGEYTGKPFRQFCAENGIKWEFSAAYTPQQNGVAERSWRNIFEMARANMITANMGRRYWVEAVRSSVYCLNRAPTRPHDGGTPYEKGHGETPKLDHLRVFGCTVYVILFPAPPITPAVTRSRAQGEQAG----GTKTEDRTSASEMPP---ILSTHSLPAAS---------ANPFNVFSDGDDGE------------NNGDTKMKD---AEPSVKDAPSAGTAAPASRGNTRKQSGTEAQRPRDRPPIRTRARARENREEDPGATARVAKMNGTGNLTEVSKGKPKSAAEALASPETGKWRAAMEEEWGALVKNGTWKSEDLGRLPAGRKAIRTNWIFKRKLKKDGSVARYKARLVAQGFPQVEGGEVFETSAPGARMSTLCTVFSLAAEHDFELEDMDVDAAYLNAPVE*ELFVKLPPEF-SPFSRDIPFRHGRITHVRLDRN*TWYS---------------IRGKSSSTLYGGSMSRRLQYMQAHISLSQYCD*-----------LRHYVRR*E*WSRSGRTL*CR-------------LGGRCRGPKVHNRICFQAERGARRWRSRKQQLVTWSSTEAKYVAAGEAGKEAVYLRELLGSIGFGCRGSTTLFEDNK*AINLSKGSDAHCRTKHIGVRWHGIREWIREGILSLKYVQAGDQLADILTKGLRRVQFQRLKK 1857 I C R+D+GGE+ FR+FC E+GIK + +AAYTPQQNG+AER R I +M ++ + ++ + +W EAV ++Y LNR+PT TP E P + H +VFGC + + P R + + G E + PP I+ + + ++P N S+ D E NN D +E V + S ++A N+ GT R P A ED + G K + A ++ WRAAME E ++ +N TW+ D LP G K I WI+K KL + G + ++KARLVA+G+ Q G + E P AR T+ + ++AA +++ +DV +A+L+ + ++V+ P F S + ++ + + W G +S + G S + + ++ + + Y+R +R R L R GG K + F GA W SRKQ +VT S+TEA+++AA + ++L+ +L S+G + +F DN I LSK H R+K+I +++H +R +G + L++ + +Q+ADI+TK L+ F+ LKK Sbjct: 507 ICCLRTDRGGEFNSDEFREFCEEHGIKRQLTAAYTPQQNGIAERKNRTIMDMVKSMLAAKDIPKEFWPEAVNWAIYVLNRSPTAAIPDKTPEEAWSSSKPTVKHFKVFGCIAHTYV-------PDAHRKKLDDKSIKCIFLGVSEESKAYRLYHPPTKRIIISRDVKFVEQEKWKWSQVSDPANTVSEDSDEELDERNNVGEEPINNHHEDTHDDTSSEIQVNEHTSTSSSANTGDSNSNLDQGTI------RKPPSWPADYDTTMTEDEYIDEEAMNLIVFGPCIHEDPIKFEDAEKSQT------WRAAMENEIDSIERNNTWELTD---LPKGAKVIGVKWIYKTKLNEKGEIEKFKARLVAKGYAQKYGTDYKEVFVPVARWDTIRCLLAIAAMKGWDVYQLDVKSAFLHGELHETVYVEQPLGFIKRGSENKVYKLHKALYGLKQAPRAWNDDSDLLIISLYVDDLIFTGNNSVMVKGFKESMMKTFDMTDLGKMRFMEHPVETHMMAAKRILRYIRG----TRELRVLYKRGNQTGLIAYSDSDFGGDVDDRKSTSGYLFMLGSGAVSWSSRKQPIVTLSTTEAEFIAAAHCVCQGIWLKRILESMGLKQQRCLDVFCDNSSTIKLSKNPVLHGRSKYIDIKFHFLRNLSCDGTIELEHCTSQNQIADIMTKALKLESFENLKK 1170
BLAST of mRNA_H-paniculata_contig15120.3032.1 vs. uniprot
Match: A0A6A4BSQ8_9STRA (Integrase catalytic domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4BSQ8_9STRA) HSP 1 Score: 194 bits (492), Expect = 4.160e-50 Identity = 187/647 (28.90%), Postives = 286/647 (44.20%), Query Frame = 1 Query: 1 IKCRRSDQGGEYTGKPFRQFCAENGIKWEFSAAYTPQQNGVAERSWRNIFEMARANMITANMGRRYWVEAVRSSVYCLNRAPTRPHDGGTPYEKGHGETPKLDHLRVFGCTVYVILFPAP--PITPAVTRSRAQGEQAG--GTKTEDRTSASEMPPILSTHSLPAASANPFNVFSDGDDGENNGDTKMKDAEPSVKDAPSAGTAAPASRGNT-----RKQSGTE-AQRPRDRPPIRTRARARENRE-----EDPGATARV---------------AKMNGTGNLTEVSKGK--------PKSAAEALASPETGKWRAAMEEEWGALVKNGTWKSEDLGRLPAGRKAIRTNWIFKRKLKKDGSVARYKARLVAQGFPQVEGGEVFETSAPGARMSTLCTVFSLAAEHDFELEDMDVDAAYLNAPVE*ELFVKLPPEFSPFSRDIPFRHGRITHVRLDRN*TWYSIRGKSSSTLYGGSMSRRLQYMQAHISLSQYCD*LRHYVRR*E*WSRSGRTL*CRLGGRCRGPKVHNRICFQAERGARRWRSRKQQLVTWSSTEAKYVAAGEAGKEAVYLRELLGSIGFGCRGSTTLFEDNK*AINLSKGSDAHCRTKHIGVRWHGIREWIREGILSLKYVQAGDQLADILTKGL 1827 IK RSD GGEYTG+ F+++ ++ GI+ E + YTPQQNG+AER R++ EMAR + + +++W EAV +S + +NR P TPYE + + P+L +L+VFG Y + + + R G + G G + + + ++ + + + S F +GDD + + D A APS G + N + + TE A P I TR+R R +E E G ++ A++ T L + G+ PK+ AEA +W+ A+ E +L+ N TWK L PA ++ I W+F K + G V RYKARLVA+G+ Q G + ET +P A ++++ + + E+E DVDAA+L +E E++++LP D+ G+ V + LQ + H C P V WRS Q+ V SSTEA+Y+A + KE V++R LL IG G T ++EDN+ A+ L+K RTKHI +R+H IRE + + L+YV +QLAD +TK L Sbjct: 56 IKRLRSDNGGEYTGRLFKEYLSKQGIRHEKTVPYTPQQNGLAERMNRSLVEMARCMLYHEGIDKKWWAEAVNTSAWIINRIPNTV-TVKTPYEIVYQKKPQLQNLKVFGALGYGHIPDEKRRKLYAKAFKCRYLGYEDGVKGCRVLNMETG-QVRIVRTVKFMETTSTGDFVTEVEGDDKDGDEDVAAPHAT-----APSRGQTQTLTIFNDEVVPLQHEVTTETAIVPASSHSIITRSRTRHIKETTDPEEAEGRKKQIVAPSAIGTDRQKVSQARVKPTEELLAIEGGQLMAATEEVPKTYAEATTRQGQDEWKKAIASELESLIANKTWK---LVPKPAHQRPIGCRWVFALKRDEKGQVVRYKARLVAKGYSQRHGIDYEETYSPFAYLNSVRAMLAKCGAEGMEIEQCDVDAAFLYGKLEEEIYMELPEGLKELL-DLAEAEGKDDVVCM------------------------LLQILYGH----------------------------------CGAPVV--------------WRSMFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAEQVGHTVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIREKVVSNEVELEYVDTKNQLADFMTKSL 619
BLAST of mRNA_H-paniculata_contig15120.3032.1 vs. uniprot
Match: A0A2K3MY74_TRIPR (Retrotransposon-related protein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MY74_TRIPR) HSP 1 Score: 197 bits (501), Expect = 8.500e-50 Identity = 205/798 (25.69%), Postives = 304/798 (38.10%), Query Frame = 1 Query: 1 IKCRRSDQGGEYTGKPFRQFCAENGIKWEFSAAYTPQQNGVAERSWRNIFEMARANMITANMGRRYWVEAVRSSVYCLNRAPTRPHDGGTPYEKGHGETPKLDHLRVFGCTVYVI-----------------------------LFPAPPITPAVTRSRAQGEQAGGTKTEDRTSASEMPPILSTHSLPAASANPFNVFSDGDDGENNGDTKMKDAEPSVKDAPSAGTAAPASRGNTRKQSGTEAQRPRDRPPIRTRARARENREEDPGATARVAKMNGTGNLTEVSKGKPKSAAEALASPETGKWRAAMEEEWGALVKNGTWKSEDLGRLPAGRKAIRTNWIFKRKLKKDGSVARYKARLVAQGFPQVEGGEVFETSAPGARMSTLCTVFSLAAEHDFELEDMDVDAAYLNAPVE*ELFVKLPPEFSPFSR-DIPFRHGRITHVRLDRN*TWYSI-----------RGKSSSTLY-----GGS-------------------------MSRRLQYMQAHISLSQY---------------CD*LRHYVRR*---------------------------------------------------------------------E*WSRSGRTL*CRLG-------------------------GRCRGPKVHNRICFQAERGARRWRSRKQQLVTWSSTEAKYVAAGEAGKEAVYLRELLGSIGFGCRGSTTLFEDNK*AINLSKGSDAHCRTKHIGVRWHGIREWIREGILSLKYVQAGDQLADILTKGLRRVQFQRLK 1854 IKC R+D+GGEY K F +FC+ +GI + +AAYTPQQNGVAER R I M R+ + M + +W EA S++ LNR PT + TP E G P++DH R+FGC +V LF PIT +T SR + ++ +L + + + D D NN + + S G+ + G R+ G + + PG TE P + EA KWR AM +E ++ KNGTW+ L LP+G KAI WIFK KL + G+V +YKARLVA+G+ Q G + E AP AR+ T+ + + AA++ +E+ +DV +A+L ++ E++V+ P F D ++ + + WYS R S TL+ GG MS ++ + + Y C R Y R E W + R L G G K + F GA W S+KQ +VT S+TEA+Y+AA + ++L LL +G + ++ DN I LSK S H ++KHI V++H +R+ + EG + LKY +Q+ADI+TK L++ QF +L+ Sbjct: 554 IKCLRTDRGGEYNSKEFTEFCSTHGINRQLTAAYTPQQNGVAERKNRTIMNMVRSMLSEKQMPKEFWAEAANWSIHILNRCPTTALENMTPQEAWTGCKPRVDHFRIFGCLAHVHVPDQKRIKLDDKSKTHIFLGVSKESKAYKLFD--PITKKITISRDVKFEENACWKWKQSKGEVQSDVLDLEDKNSDANKELELEEDSDS--NNTSNTISQTGGNSSTTSSGGSEPNSPTGRFRRAPGWMS-------------------DYTPGEGLSEEXXXXXXXXTEED---PVTYNEAAKEK---KWRDAMAKEIDSIEKNGTWR---LTTLPSGVKAIGVKWIFKTKLNEHGNVEKYKARLVAKGYAQQYGIDYTEVFAPVARLDTIRLILATAAQNKWEVYQLDVKSAFLQGELKEEVYVQQPTGFEKKGEEDKVYKLNKALYGLKQAPRAWYSRIESYFIREGFERCASEHTLFTKEKEGGKILIVSLYVDDLIYTGNNESICEEFKMSMMHEFDMSDLGKMSYFLGMEIIQNSKGIFMCQ--RKYAREVLARFGMSDSKPVGNPIVPGTRLSKDEKGTKIDSTMFKQVVGSLMYLTATRPDIMFGVSLISRYMSSPTEEHWCAAKRILRYINGTIEMGILYKGESITELVAYTDSDFAGDLNDRKSTSGFAFLLAGGAVSWASKKQPVVTLSTTEAEYIAAASCACQYIWLTRLLEKLGHKGEEGSIMYCDNSSTIQLSKHSVFHGKSKHIDVKFHFLRDLVNEGTVKLKYCNTQNQVADIMTKPLKKEQFIKLR 1317
BLAST of mRNA_H-paniculata_contig15120.3032.1 vs. uniprot
Match: A0A5N5G876_9ROSA (Uncharacterized protein n=1 Tax=Pyrus ussuriensis x Pyrus communis TaxID=2448454 RepID=A0A5N5G876_9ROSA) HSP 1 Score: 196 bits (497), Expect = 2.890e-49 Identity = 202/743 (27.19%), Postives = 313/743 (42.13%), Query Frame = 1 Query: 1 IKCRRSDQGGEYTGKPFRQFCAENGIKWEFSAAYTPQQNGVAERSWRNIFEMARANMITANMGRRYWVEAVRSSVYCLNRAPTRPHDGGTPYEKGHGETPKLDHLRVFGCTVYV-----------------ILFPAP----------PITPAVTRSR-----AQGEQAGGTKTEDRTSASEMPPILSTHSLPAASANPFNVFSDGDDGENNGDTKMKDAEPSVKDAPSAGTAAPASRGNTRKQSGTEAQRPRDRPPIRTRARARENREEDPGATARVAKMNGTGNLTEVSKGKPKSAAEALASPETGKWRAAMEEEWGALVKNGTWKSEDLGRLPAGRKAIRTNWIFKRKLKKDGSVARYKARLVAQGFPQVEGGEVFETSAPGARMSTLCTVFSLAAEHDFELEDMDVDAAYLNAPVE*ELFVKLPPE-----------------------------FSPFSRDI------------------------------------------------PFRHGRITHVRLDRN*------TWYSIRGKSSSTLYGGSMSRRLQYMQAHISLS---------QYCD*LRHYVRR*E*---WSRSGRT------L*CRLGGRCRGPKVHNRICFQAERGARRWRSRKQQLVTWSSTEAKYVAAGEAGKEAVYLRELLGSIGFGCRGSTTLFEDNK*AINLSKGSDAHCRTKHIGVRWHGIREWIREGILSLKYVQAGDQLADILTKGLR 1830 I+ R+D+GGE+T F FC ENGI + + AYTPQQNGVAER R I M R+ + + + +W EA +V+ LNR PT TP E +G P +DH R+FGC + IL P++ + SR + + G +D A S P +++P F D G+ + EP ++ GT G+ ++ R R RPPI R + + G + + +L P + +A+ S KWR AM +E ++ KN TW +L +LP G K I W+FK KLK++G V +YKARLVA+G+ Q G + E AP AR+ T+ V SLAA+ ++ + +DV +A+L+ +E E+FV PP F F + + P ++ + ++L +N T Y R S +Y + L ++ + IS Q + YV+ + + G T G K + F GA W S+KQ +VT S+TEA+++AA + + V+LR ++ S+ G T ++ DN AI LSK H R+KHI +R+H +R+ +++G+L L + +Q+AD+LTK L+ Sbjct: 674 IRSLRTDRGGEFTSHEFSNFCRENGIHRQLTTAYTPQQNGVAERKNRTIMNMVRSMLSAKQIPKTFWPEATNWAVHVLNRCPTLAVKNKTPEEAWNGHKPSVDHFRIFGCIAHAHVPDHKRVKLDAKSCKCILLGVSEESKAYRLYEPVSQKIVISRDVVFEEDQQWSWGDNYKDVIVADLEWNDDEEISSPRTTSDPG--FESNDVGD--------EPEPEIEYE---GTMV--GEGSQSDETSPHGGRTR-RPPIWMR-------DYETGQGLSDEETDEMAHLALFIDRDPTTYEDAMKSE---KWRHAMNQEIQSIEKNDTW---ELVKLPPGGKTIGVKWVFKTKLKENGEVDKYKARLVAKGYCQQYGIDYAEVFAPVARLDTIRVVISLAAQKNWGIYQLDVKSAFLHGEIEEEVFVDQPPGYEQKGQESKILIACLYVDDLIFTGNDETMFEKFKKSMTAEFDMTDLGKMRYFLGIEVIQRSDGVFIGQRKYAQEILEKFNMEQCNPVQNPVVPGLKLTKNEGVEVDSTVY--RQMVGSLMYLTATRPDLMFVVSLISRYMERPTEEHLQVAKKVLRYVKGTVDLGIFYKKGGTEELTGYTDSDYAGDQDDRKSTSGYVFMISSGAVSWSSKKQPVVTLSTTEAEFIAAASSACQVVWLRRIMESLNQEQNGPTLVYCDNVSAIKLSKNPVMHGRSKHIDIRFHFLRDLVKDGVLELVQCSSQEQVADVLTKPLK 1385
BLAST of mRNA_H-paniculata_contig15120.3032.1 vs. uniprot
Match: A0A1R3JWQ0_COCAP (Uncharacterized protein n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3JWQ0_COCAP) HSP 1 Score: 195 bits (496), Expect = 4.510e-49 Identity = 195/719 (27.12%), Postives = 305/719 (42.42%), Query Frame = 1 Query: 1 IKCRRSDQGGEYTGKPFRQFCAENGIKWEFSAAYTPQQNGVAERSWRNIFEMARANMITANMGRRYWVEAVRSSVYCLNRAPTRPHDGGTPYEKGHGETPKLDHLRVFGCTVYVILFPAPPITPAVTRSRA--QGEQAGGTKTEDRTSASEMPPILSTHSLPAASANPFNVFSDGDDGENNGDTKMKDAEPSVKDAPSAGTAAPASRGNTRKQSGTEAQRPRDRPPIRTRARARENREEDPGATARVAKMNGTGN--------LTEVSKGKPKSAAEALASPETGKWRAAMEEEWGALVKNGTWKSEDLGRLPAGRKAIRTNWIFKRKLKKDGSVARYKARLVAQGFPQVEGGEVFETSAPGARMSTLCTVFSLAAEHDFELEDMDVDAAYLNAPVE*ELFVKLPPEFSPFSRD-----------------------------------IPFRHGRITHVRLDR-----------N*TW---YSIRGKS------------------------------------------SSTLYGGSMSRRLQYMQAHISLSQYCD*LRHYVRR*-E*WSRSGRTL*CRLGGRCRGPKVHNRICFQAERGARRWRSRKQQLVTWSSTEAKYVAAGEAGKEAVYLRELLGSIGFGCRGSTTLFEDNK*AINLSKGSDAHCRTKHIGVRWHGIREWIREGILSLKYVQAGDQLADILTKGLRRVQFQRL 1851 IK RSD+GGE+T F FC GIK + +A +TPQQNGV ER R I +M R+ + ++M R +W EAV S + LNR+P+R + TP E G P + + RVFGC Y + P R + +GE+ + + A ++ + + + VF++ + + +M + D P +Q + RP+ I+ R+ E E + G N L + P EA+ + KW+ AM EE A+ KN TW+ D LP G KAI W++K K+K +G V +YKARLV +G+ Q G + E AP AR+ T+ V +LAA++ + + +DV +A+L+ ++ ++FV+ P F + + P+ H D+ + +W YSIRG+ +S+L+ + + + + + ++ + + + + + L G K F+ A W S+KQ +VT SSTEA+YVAA +AV++R L + RG+T +F DN AI LSK H RTKHI VR+H +RE + +G + L Y + DQ DI TK L+ F +L Sbjct: 550 IKMLRSDRGGEFTSDEFVTFCENAGIKRQMTAPHTPQQNGVCERKNRTILDMVRSILRRSSMPRTFWPEAVAWSTHVLNRSPSRALNS-TPEEAWSGVRPAVHYFRVFGCIAYAHV-------PDQKRKKLDDKGEKCVLLGVSEESKAYKLYNPTTKKLIISRDV----VFNENEFWPWDSPREMSKTASILDDEVDEVVVQPVVPQQQMQQEIGVSTRPQR---IKRRSTLLEGFE-----------VTGLPNFDSDHVSQLALFADCDPVLFEEAV---KEAKWQKAMAEEIKAIEKNNTWELVD---LPEGEKAIGVKWVYKTKVKPNGEVDKYKARLVVKGYKQEYGVDYTEVFAPVARLDTVRMVIALAAQNSWSIYQLDVKSAFLHGELKEQVFVEQPSGFIKYGDEHKVYRLRKALYGLKQAPRAWYSRIDSYFVKEGFLKCPYEHTLYVKHDGDKMMIICLFGDASSLSWFGDYSIRGRHFCLPKKYVNEVLDRFQMGDCNCATTPMEQSLKLVKNPGGEYVNSSLFKQMVGSLMYLTASRPDIMHSVGIISRFMEKPMQQHLLAAKRILRYLKGTPDFGKSTTGYVFKLGSAAIAWSSKKQPIVTLSSTEAEYVAATSGACQAVWMRRTLAEMKMEMRGATRMFCDNSSAIKLSKNPVFHGRTKHIHVRFHFLRELVEKGEIELSYCRTEDQAVDIFTKPLKAASFFKL 1236
BLAST of mRNA_H-paniculata_contig15120.3032.1 vs. uniprot
Match: A0A4Y1RLR1_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RLR1_PRUDU) HSP 1 Score: 194 bits (494), Expect = 6.840e-49 Identity = 192/738 (26.02%), Postives = 294/738 (39.84%), Query Frame = 1 Query: 1 IKCRRSDQGGEYTGKPFRQFCAENGIKWEFSAAYTPQQNGVAERSWRNIFEMARANMITANMGRRYWVEAVRSSVYCLNRAPTRPHDGGTPYEKGHGETPKLDHLRVFGCTVYVILFPAPPITPAVTRSRAQGEQAGGTKTEDRTSASEMPPILSTHSLPAASANPFNVFSDGDDGENNGDTKMKDAEPSVKDAPSAGTAAPASRGNTRKQSGTEAQRPRDRPPIRTRARARENREEDPGATARVAKMNGTGNLTEVSKGKPKSAAEALASPETGKWRAAMEEEWGALVKNGTWKSEDLGRLPAGRKAIRTNWIFKRKLKKDGSVARYKARLVAQGFPQVEGGEVFETSAPGARMSTLCTVFSLAAEHDFELEDMDVDAAYLNAPVE*ELFVKLPPEFSP------------------------FSR-DIPF-------------------RHGRITHVRLDRN*TWYSIRGKSSSTLYGGSMSRRLQ---------------------------------YMQAHISLSQYCD*LR----------------------------------------HYVRR*E*WSRSGRTL*CR---LGGRCRGPKVHNRICFQAERGARRWRSRKQQLVTWSSTEAKYVAAGEAGKEAVYLRELLGSIGFGCRGSTTLFEDNK*AINLSKGSDAHCRTKHIGVRWHGIREWIREGILSLKYVQAGDQLADILTKGLRRVQFQRLK 1854 +KC R+D+GGE+T F FC ++GIK + + AYTPQQNGVAER R + M R+ + + + +W EAV + Y LNR PT TP E G P ++H RVFGC +V + P R GE + E+R S ++G+ +G G N ++ +RP PP + E ED A+V V+ P EA+ + KWR AM+ E ++ KN TW L LPAG K I W++K K + G + ++KARLVA+G+ Q G + E AP ARM T+ T+ +LAA++ +++ +DV +A+L+ + ++V+ P + FSR + F R G+I V + + ++ + + + SM R Y + + Y R HY R G+ L G K + F GA W S+KQ +VT S+TEA++VAA +A++++ +L +G G T + DN I LSK H R+KHI VR+H +R +EG ++L + + DQ+AD++TK L+ FQ+L+ Sbjct: 452 VKCLRTDRGGEFTSNDFNDFCKQSGIKRQLTTAYTPQQNGVAERKNRTVMNMVRSVLSDKKIPKTFWPEAVNWTFYVLNRCPTLVVKNVTPQEAWSGVKPSVEHFRVFGCLAHVHI-------PDARRDLEWGENEENNEGEERVS---------------------------ENGDEDGXXXXXXXXXXXXXXREVGNP------NGPDENEGRVRRP---PPYLNDYISGEGLSEDEAHMAQV-----------VATEDPFHFEEAVRNV---KWRQAMDSEIKSIEKNKTWT---LTELPAGAKKIGVKWVYKTKYNEHGEIDKHKARLVAKGYSQKHGIDYTEVFAPVARMDTVRTIIALAAQNGWKIFQLDVKSAFLHGELSENVYVEQPRGYEKKGKEHLVYKLHKALYGLKQAPRAWFSRIEAHFINEGFQRCDSEQTLFTKRNREGKIIIVSIYVDDLIFTGDDEDMMSEFKSSMLREFDMSDLGSMRFFLGIEVLQRADDSKDEDGITVDETYFKQLVGSLMYLTATRPDMMFVTSLISRYMAKPTELHLQAAKRALRYLKGTVNYGIHYKR-----GGDGKLLAFTDSDYAGDMEDRKSTSGYVFLLSSGAVSWSSKKQPIVTLSTTEAEFVAAAVCACQAIWMKRVLKELGHGDEVCTHIKCDNSSTIKLSKNPVMHGRSKHIDVRYHFLRNLTKEGSIALVHCGSDDQVADVMTKPLKVDAFQKLR 1124 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15120.3032.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15120.3032.1 >prot_H-paniculata_contig15120.3032.1 ID=prot_H-paniculata_contig15120.3032.1|Name=mRNA_H-paniculata_contig15120.3032.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=337bp MARANMITANMGRRYWVEAVRSSVYCLNRAPTRPHDGGTPYEKGHGETPKback to top mRNA from alignment at H-paniculata_contig15120:3641..6240- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15120.3032.1 ID=mRNA_H-paniculata_contig15120.3032.1|Name=mRNA_H-paniculata_contig15120.3032.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2600bp|location=Sequence derived from alignment at H-paniculata_contig15120:3641..6240- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15120:3641..6240- >mRNA_H-paniculata_contig15120.3032.1 ID=mRNA_H-paniculata_contig15120.3032.1|Name=mRNA_H-paniculata_contig15120.3032.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2022bp|location=Sequence derived from alignment at H-paniculata_contig15120:3641..6240- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |