mRNA_H-paniculata_contig15062.3007.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig15062.3007.1
Unique NamemRNA_H-paniculata_contig15062.3007.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig15062.3007.1 vs. uniprot
Match: A0A6H5L5G7_9PHAE (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5G7_9PHAE)

HSP 1 Score: 365 bits (938), Expect = 2.700e-121
Identity = 189/251 (75.30%), Postives = 213/251 (84.86%), Query Frame = 1 
Query:    1 QAAADAYDAILDEQLDLVGPGLLMRRARCHFALGKWLQAAADAGRAAKLAAEGDMDEGGSGARERAEALELRGRCYIMLGDFEMAANHFRQVLLDDPDNGPCREEHRRCRAVVKKLDAGAKLLEKGDVDGATQEWRAATALEPDNPLFVGPLLLKIASAHEGAKNWSEMKRAAQECLNVHPGGEEGIRAEIVLGDVYMQEEEFQEAVHAFTRAENIGKESGGGEALDDARQKLKKAQIALEQSKKKNYYKV 753
            +AAA+AYDAILDEQLDLVG  LLMRRARCHFALG+WLQAAADAGRAAK+A+E D D+    ARERAEALELRGRCYI LGD+E+A NHFRQVLLDDPDNGPCRE+HRRCRAVVKK++AGA+LL  GDV GAT+ WRAATALEPDNP  +GPLLL+IASAH GAK+W+E KRAAQECLN HP GE G +AEIV+GDV+   EEFQEAV+A+ RAE   KE G  E LD AR KLK+A I LEQSKKK YYK+
Sbjct:  213 EAAAEAYDAILDEQLDLVGAELLMRRARCHFALGRWLQAAADAGRAAKVASEADDDKA---ARERAEALELRGRCYIHLGDYELAGNHFRQVLLDDPDNGPCREQHRRCRAVVKKVEAGAELLSGGDVAGATKAWRAATALEPDNPALLGPLLLRIASAHLGAKDWAETKRAAQECLNTHPDGEVGAQAEIVMGDVHQAAEEFQEAVNAYARAETKVKEIGM-EVLDQARAKLKQANILLEQSKKKQYYKI 459
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BLAST of mRNA_H-paniculata_contig15062.3007.1 vs. uniprot
Match: A0A4D9D4S5_9STRA (J domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4S5_9STRA)

HSP 1 Score: 140 bits (354), Expect = 3.920e-35
Identity = 93/235 (39.57%), Postives = 132/235 (56.17%), Query Frame = 1 
Query:   52 VGPGLLMRRARCHFALGKWLQAAADAGRAAKLAAEGDMDEGGSGARERAEALELRGRCYIMLGDFEMAANHFRQVLLDDPDNGPCREEHRRCRAVVKKLDAGAKLLEKGDVDGATQEWRAATALEPDNPLFVGPLLLKIASAHEGAKNWSEMKRAAQECLNVHPGGEEGIRAEIVLGDVYMQEEEFQEAVHAF-TRAENIGKESGGGEALDDARQKLKKAQIALEQSKKKNYYKV 753
            V P LL+RRARC+F    +  AAAD GRA KL       +G S       ALELRG  Y  LG+F+MA  HFR+ L  DP++  C+E HRR + + K  + G K ++ GDV       + A A++P +  F  P+LL+IA AH G   ++  ++A    + ++P   E     IVL D+   +EE++EAV    + AE   +++   EAL       KKA+IAL+QSK+ NYYKV
Sbjct:  210 VAPELLLRRARCNFEENDFYSAAADTGRAIKL-------DGSS-----IPALELRGLAYYKLGEFDMAQTHFREGLKFDPEHLGCKEGHRRVKKMQKAAEKGRKAVDVGDVAQGVGYLQEAMAVDPSHVYFNAPILLQIARAHMGVAAFAPARQAVDSAMQMNPSLSE---THIVLSDLLQAQEEYEEAVRVLKSAAEAFAEDASVQEAL-------KKAEIALKQSKEVNYYKV 422
[Close]
BLAST of mRNA_H-paniculata_contig15062.3007.1 vs. uniprot
Match: A0A836CN30_9STRA (J domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN30_9STRA)

HSP 1 Score: 132 bits (332), Expect = 2.750e-32
Identity = 84/251 (33.47%), Postives = 126/251 (50.20%), Query Frame = 1 
Query:    7 AADAYDAILDEQLDLVGPGLLMRRARCHFALGKWLQAAADAGRAAKLAAEGDMDEGGSGARERAEALELRGRCYIMLGDFEMAANHFRQVLLDDPDNGPCREEHRRCRAVVKKLDAGAKLLEKGDVDGATQEWRAATALEPDNPLFVGPLLLKIASAHEGAKNWSEMKRAAQECLNVHPGGEEGIRAEIVLGDVYMQEEEFQEAVHAFTRAENIGKESGGGEALDDA--RQKLKKAQIALEQSKKKNYYKV 753
            A D Y  +LD   +     LL+R+A C + L  +    AD GR  KL             +E   AL++RG  Y  L +  MA NHF++ L  DPD+  C++   RCRAV K+++      +      A Q W+ A  L+P + L  GPLL++ A A   A  W      A   L   P  +E   A++++GD  M+ E++++AV  +  A          E  DD   +QK +KA++AL+QSK+KNYYK+
Sbjct:  142 ARDLYGQVLDHIAEYYAVPLLLRKAECSWHLNDYEVVVADTGRVIKL------------QKENTAALKMRGEAYYRLAEVNMAINHFKEALKHDPDHRECKDWFHRCRAVQKRMEQAEGYNQSAQPVLAAQLWQEAAELDPHHRLLNGPLLVRAAGALARAGLWQRSVDVATRALQADPSLKE---AKVLIGDAQMELEQYEQAVRTYQEAR---------EMEDDQVLQQKQRKAEVALKQSKQKNYYKI 368
[Close]
BLAST of mRNA_H-paniculata_contig15062.3007.1 vs. uniprot
Match: A0A7S1UAC9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAC9_9STRA)

HSP 1 Score: 107 bits (268), Expect = 3.350e-23
Identity = 78/230 (33.91%), Postives = 117/230 (50.87%), Query Frame = 1 
Query:   61 GLLMRRARCHFALGKWLQAAADAGRAAKLAAEGDMDEGGSGARERAEALELRGRCYIMLGDFEMAANHFRQVLLDDPDNGPCREEHRRCRAVVKKLDAGAKLLEKGDVDGATQEWRAATALEPDNPLFVGPLLLKIASAHEGAKNWSEMKRAAQECLNVHPGGEEGIRAEIVLGDVYMQEEEFQEAVHAFTRAENIGKESGGGEALDDARQKLKKAQIALEQSKKKNYYK 750
            G+ M RA  +  +G+  +A AD G+  K+  +GD            +AL+ RG CY  LG+ E A NH+R+ L  DP++  C++ H++ R ++K  D G K  +  D   A                +VGP L+ I+ A    K   +   AA+E +NV     E   A   LGDV +  E+++EAV +  RA  I    G  +     ++KL KA++ALEQSKK+NYYK
Sbjct:  180 GMHMERAWAYQQMGELYEAIADYGKVLKI--KGD----------NLDALQNRGACYYTLGEHEQAINHWREGLKRDPEHKGCKDAHKKLRKLMKAHDKGQKAFDGRDYPTAIXXXXXXXXXXXXXKNYVGPTLILISQAAVKGKALEDAADAARESINVL----ETADAWAQLGDVQVAREQYEEAVRSHGRAVEI---DGSDKKF---KEKLHKAEVALEQSKKRNYYK 387
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BLAST of mRNA_H-paniculata_contig15062.3007.1 vs. uniprot
Match: A0A1Z5KA29_FISSO (DnaJ homolog subfamily C member 3 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KA29_FISSO)

HSP 1 Score: 99.0 bits (245), Expect = 4.300e-20
Identity = 74/236 (31.36%), Postives = 116/236 (49.15%), Query Frame = 1 
Query:   52 VGPGLLMRRARCHFALGKWLQAAADAGRAAKLAAEGDMDEGGSGARERAEALELRGRCYIMLGDFEMAANHFRQVLLDDPDNGPCREEHRRCRAVVKKLDAGAKLLEKGDVDGATQEWRAATALEPDNPLFVGPLLLKIASAHEGAKNWSEMKRAAQECLNVHPGGE--EGIRAEIVLGDVYMQEEEFQEAVHAFTRAENIGKESGGGEALDDARQKLKKAQIALEQSKKKNYYKV 753
            VG  L   +A+  F LG +    +D G+  K  A+              EA  LRG+ Y  LG+ E A  H+R+ L  DP++  C++ H+  +   KK   G      G    A + W  A A++  +  F   L + +A A+  A + +   + AQ   +V   GE  E + A   LG++    E+++EAV  F RA  + ++    +    A+QKL+ AQIAL+QSK+KNYYK+
Sbjct:  171 VGDDLRWPKAQSLFHLGDYYGTISDTGKLLKQNAQ------------HLEAYHLRGQAYHRLGEHEQAILHYREGLKLDPEHKECKKGHKALKTTEKKKKKGDDAFNDGKYKEAVEFWLQAIAVDETHTAFARSLQIPLARAYSKAGDHARALKVAQ--AHVEDSGETTESLWA---LGEIQQNAEKYEEAVRTFQRAVEVTEDRV--QEQQTAKQKLRDAQIALKQSKEKNYYKI 387
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BLAST of mRNA_H-paniculata_contig15062.3007.1 vs. uniprot
Match: A0A7S4N0N3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N0N3_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.390e-18
Identity = 65/230 (28.26%), Postives = 104/230 (45.22%), Query Frame = 1 
Query:   64 LLMRRARCHFALGKWLQAAADAGRAAKLAAEGDMDEGGSGARERAEALELRGRCYIMLGDFEMAANHFRQVLLDDPDNGPCREEHRRCRAVVKKLDAGAKLLEKGDVDGATQEWRAATALEPDNPLFVGPLLLKIASAHEGAKNWSEMKRAAQECLNVHPGGEEGIRAEIVLGDVYMQEEEFQEAVHAFTRAENIGKESGGGEALDDARQKLKKAQIALEQSKKKNYYKV 753
            LL  +A+  +  G +    +D GR  K  ++              +A +LRG  Y  LG+ +MA NHFR+ L  DP++  C+  H+  + + KK   G                            F+ P +LK+  AH  A    +  + A    N H    E +   + LGD  +  E++ +AV  F RA     E    E + + ++K++KA+IAL+QSK+KNYYK+
Sbjct:  197 LLFMKAKAEYNTGDYYGTVSDTGRILKAHSD------------HLDAYQLRGEAYFRLGEHDMAVNHFREALKLDPEHKGCKAGHKAVKTITKKEKRGDDAXXXXXXXXXXXXXXXXXXXXXXXVAFIRPTILKVIKAHSAAGEHDDAIKEA----NRHIELGESVDGILALGDAELGAEKYVDAVRTFRRA----LEFEPNERMQETKEKVQKAEIALKQSKEKNYYKI 406
[Close]
BLAST of mRNA_H-paniculata_contig15062.3007.1 vs. uniprot
Match: B7FV17_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FV17_PHATC)

HSP 1 Score: 94.0 bits (232), Expect = 2.510e-18
Identity = 58/185 (31.35%), Postives = 93/185 (50.27%), Query Frame = 1 
Query:  199 EALELRGRCYIMLGDFEMAANHFRQVLLDDPDNGPCREEHRRCRAVVKKLDAGAKLLEKGDVDGATQEWRAATALEPDNPLFVGPLLLKIASAHEGAKNWSEMKRAAQECLNVHPGGEEGIRAEIVLGDVYMQEEEFQEAVHAFTRAENIGKESGGGEALDDARQKLKKAQIALEQSKKKNYYKV 753
            EA  LRG  Y  LG+ + A  HFR+ L  DP+   C++ H+  +A+ KK   G +    GD + A+  +  A  L+P +  F  P+ L++   +       +    AQ+ +       E +     L +     + +++AV  F RA  +  +  G E   +A QKLK AQ+AL+QSK+KNYYK+
Sbjct:  220 EAYCLRGSAYHRLGEHDQAVLHFREGLKLDPEQADCKKGHKSVKALEKKKAKGDEAYAAGDFESASGHYERAMMLDPTHHAFNRPVQLQLVQTYSKLGQHKKAMDTAQKYVEEL----ESLEGLWALANAQQAADSYEDAVRTFQRAVEVAPD--GSEQEREANQKLKNAQVALKQSKEKNYYKI 398
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BLAST of mRNA_H-paniculata_contig15062.3007.1 vs. uniprot
Match: A0A7S2WVT0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVT0_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 8.620e-18
Identity = 74/234 (31.62%), Postives = 108/234 (46.15%), Query Frame = 1 
Query:   64 LLMRRARCHFALGKWLQAAADAGRAAKLAAEGDMDEGGSGARERAEALELRGRCYIMLGDFEMAANHFRQVLLDDPDNGPCREEHRRCRAVVKKLDAGAKLLE----KGDVDGATQEWRAATALEPDNPLFVGPLLLKIASAHEGAKNWSEMKRAAQECLNVHPGGEEGIRAEIVLGDVYMQEEEFQEAVHAFTRAENIGKESGGGEALDDARQKLKKAQIALEQSKKKNYYKV 753
            LL+ RA     LG + +A AD+GRA K+ ++               ALE+RGR Y  LG+ E A NH+RQ L  DP++   +  +R     VKKL+   K  E     G ++ A ++WRAA A++  +  F  P L+KI+ A    K W +  RAA++    H    E  R +  L                               A D     L+KA++AL+QSK+ +YYKV
Sbjct:  198 LLLHRAHSSLNLGDFFEAVADSGRAIKIESDSIA------------ALEIRGRAYYHLGEHEHALNHWRQALKFDPEHKSVKGHYR----TVKKLEKLRKSAEANEASGQLEAAIKDWRAAIAVDDTHHAFAAPALIKISKALTRLKRWDDAIRAAEDASKRH---HEDSRMDAQLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANDG----LRKAKVALKQSKEVDYYKV 408
[Close]
BLAST of mRNA_H-paniculata_contig15062.3007.1 vs. uniprot
Match: A0A6S8ZH32_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZH32_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.430e-16
Identity = 58/185 (31.35%), Postives = 91/185 (49.19%), Query Frame = 1 
Query:  199 EALELRGRCYIMLGDFEMAANHFRQVLLDDPDNGPCREEHRRCRAVVKKLDAGAKLLEKGDVDGATQEWRAATALEPDNPLFVGPLLLKIASAHEGAKNWSEMKRAAQECLNVHPGGEEGIRAEIVLGDVYMQEEEFQEAVHAFTRAENIGKESGGGEALDDARQKLKKAQIALEQSKKKNYYKV 753
            EA +LRG  Y  LG+ + A NHFR+ L  DP++  C++ H+  + ++KK                             +  FV P LLK+  AH       E  +A +E  + H    E +     LGD  +  ++F EAV  F RA  I  E    +   +A++K+++A++AL+QSK+KNYYK+
Sbjct:  227 EAYQLRGEAYFRLGEHDTAVNHFREGLKLDPEHKGCKKGHKAIKTLLKKEKRXXXXXXXXXXXXXXXXXXXXXXXXISHLAFVRPALLKVVKAHT---KLGEHDKAIEEA-HKHVNNMESVEGLHALGDAQIAADKFDEAVRTFHRAFEIAPE----DEKRNAQEKVREAEVALKQSKEKNYYKI 403
[Close]
BLAST of mRNA_H-paniculata_contig15062.3007.1 vs. uniprot
Match: A0A2R5G7Q4_9STRA (DnaJ-like subfamily C member 3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G7Q4_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 4.470e-16
Identity = 72/234 (30.77%), Postives = 112/234 (47.86%), Query Frame = 1 
Query:   76 RARCHFALGKWLQAAADAGRAAKLAAEGDMDEGGSGARERAEALELRGRCYIMLGDFEMAANHFRQVLLDDPDNGPCREEHRRCRAVVKKLDAGAKLLEKGDVDGATQEWRAATAL-------EPDNPLFVGPLLLKIASAHEGAKNWSEMKRAAQECLNVHPGG-EEGIRAEIVLGDVYMQEEEFQEAVHAFTRAENIGKESGGGEALDDARQKLKKAQIALEQSKKKNYYKV 753
            RA   F  GK+ ++ ADAG   K     D D          EAL LRGR Y ++GD EMA  HFR+ L  DP++   +E  R+    V+KL+   K  +     G TQ  + A +L       +P++  F   +  K+ + H   K   E K   ++ +     G E  +    +L  +  +  +F+EAV A+ RA  +  ++         R  L +A++AL+QSK+KNYYK+
Sbjct:  180 RAEARFRQGKFYESIADAGEVLKA----DPDN--------QEALLLRGRGYYLVGDHEMALRHFREGLKKDPEHVATKEALRK----VQKLEKLNKDADAAVARGTTQSLKDAASLYAEAVKVDPEHREFNKKISTKLCAVHARLKQVKEAKLICEQAIRFDKNGIEPYVSLAELLSSMAEETPDFEEAVRAWHRAAEVEHDNR------KVRDGLHRAEVALKQSKQKNYYKI 391
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15062.3007.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5G7_9PHAE2.700e-12175.30J domain-containing protein n=2 Tax=Ectocarpus Tax... [more]
A0A4D9D4S5_9STRA3.920e-3539.57J domain-containing protein n=2 Tax=Monodopsidacea... [more]
A0A836CN30_9STRA2.750e-3233.47J domain-containing protein n=1 Tax=Tribonema minu... [more]
A0A7S1UAC9_9STRA3.350e-2333.91Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A1Z5KA29_FISSO4.300e-2031.36DnaJ homolog subfamily C member 3 n=2 Tax=Fistulif... [more]
A0A7S4N0N3_9STRA1.390e-1828.26Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
B7FV17_PHATC2.510e-1831.35Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2WVT0_9STRA8.620e-1831.62Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A6S8ZH32_9STRA1.430e-1631.35Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A2R5G7Q4_9STRA4.470e-1630.77DnaJ-like subfamily C member 3 n=1 Tax=Hondaea fer... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15062contigH-paniculata_contig15062:117..6158 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score367.5
Seed ortholog evalue5.1e-99
Seed eggNOG ortholog2880.D7G291
KEGG koko:K09523,ko:K09527
KEGG Pathwayko04141,ko05164,map04141,map05164
Hectar predicted targeting categoryother localisation
EggNOG free text desc.positive regulation of translation initiation in response to endoplasmic reticulum stress
EggNOG OGsCOG0484@1,KOG0624@2759
Ec32 ortholog descriptionHeat shock protein 40 like protein
Ec32 orthologEc-16_002030.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03110
Exons4
Model size753
Cds size753
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15062.3007.1prot_H-paniculata_contig15062.3007.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig15062 117..6158 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929208.0763683-CDS-H-paniculata_contig15062:116..3891622929208.0763683-CDS-H-paniculata_contig15062:116..389Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15062 117..389 +
1691480770.6571422-CDS-H-paniculata_contig15062:116..3891691480770.6571422-CDS-H-paniculata_contig15062:116..389Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15062 117..389 +
1622929208.0919087-CDS-H-paniculata_contig15062:1915..21071622929208.0919087-CDS-H-paniculata_contig15062:1915..2107Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15062 1916..2107 +
1691480770.668949-CDS-H-paniculata_contig15062:1915..21071691480770.668949-CDS-H-paniculata_contig15062:1915..2107Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15062 1916..2107 +
1622929208.1042686-CDS-H-paniculata_contig15062:2782..28691622929208.1042686-CDS-H-paniculata_contig15062:2782..2869Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15062 2783..2869 +
1691480770.6779046-CDS-H-paniculata_contig15062:2782..28691691480770.6779046-CDS-H-paniculata_contig15062:2782..2869Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15062 2783..2869 +
1622929208.1163-CDS-H-paniculata_contig15062:5957..61581622929208.1163-CDS-H-paniculata_contig15062:5957..6158Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15062 5958..6158 +
1691480770.6874065-CDS-H-paniculata_contig15062:5957..61581691480770.6874065-CDS-H-paniculata_contig15062:5957..6158Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15062 5958..6158 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig15062.3007.1

>prot_H-paniculata_contig15062.3007.1 ID=prot_H-paniculata_contig15062.3007.1|Name=mRNA_H-paniculata_contig15062.3007.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=251bp
QAAADAYDAILDEQLDLVGPGLLMRRARCHFALGKWLQAAADAGRAAKLA
AEGDMDEGGSGARERAEALELRGRCYIMLGDFEMAANHFRQVLLDDPDNG
PCREEHRRCRAVVKKLDAGAKLLEKGDVDGATQEWRAATALEPDNPLFVG
PLLLKIASAHEGAKNWSEMKRAAQECLNVHPGGEEGIRAEIVLGDVYMQE
EEFQEAVHAFTRAENIGKESGGGEALDDARQKLKKAQIALEQSKKKNYYK
V
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mRNA from alignment at H-paniculata_contig15062:117..6158+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig15062.3007.1 ID=mRNA_H-paniculata_contig15062.3007.1|Name=mRNA_H-paniculata_contig15062.3007.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6042bp|location=Sequence derived from alignment at H-paniculata_contig15062:117..6158+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGCAGCCGCTGACGCCTACGATGCCATCCTTGACGAGCAGCTGGATCT
CGTGGGACCAGGACTTTTGATGAGGAGAGCCAGGTGCCACTTCGCACTAG
GGAAGTGGTTGCAAGCCGCCGCGGATGCCGGACGCGCGGCGAAGCTGGCG
GCGGAAGGGGACATGGACGAGGGTGGCAGCGGCGCACGTGAGCGCGCGGA
GGCGCTAGAGCTGCGGGGTCGATGCTACATCATGCTCGGGGACTTTGAGA
TGGCTGCCAACCATTTTAGACAGGTGAGGGTGATTGGGGTGGGGTGGGAA
ATGAGAAGGAGAGAGAGATATCCGTTGTTGAGCGACTATTTGTTTTTGCT
GCAGTGTAGCTGATAGTCTCGCCGCCAAATGTGATACCTTCTCGTTGTGT
GCCACGCAGCGTGATCAGCGTTTGGCTGATTTTAGGTGGTACCGGCTCCG
AATGACTCCTCGAGGGTGCCAGCGTTAAGGTTAGGGATGGGGTTGGGTTG
GGCTGGGTTAGGTTTACTTAGCCCTAATCTCGCAAGCGTGAAAACGAACA
AAAACAACGGTAGATATTTGAGGATGAACTGGGGTAAATTCGCCTCTCCT
TGTGCGTGGGTATGGAGGCGTTTGTGTGTTGGAGGGATGTGTGTGCACTC
TTCACCTGCCGCTGACATATTGACCGCGATGGATTATAAAAGTGGGAGTT
TATCGCGGTTGGTTGGTAATGAAAGGAAAAAAAAAGGTGAAAGTGCGTGG
TTAGCTTTTGCCTGCCCCCGTCTGGTTTGGTGTGATGCATCGGGTGCGTT
TTCCTGTGCGAGTGCAAATTTAAAGTATGTTTACTTGCGGAAGGAGCAAG
ATTGACGTCGTTTTTTGGAGCAATTATCGTGGAATGGTGGGGTTTGTATG
TGGGATGATGCGTTTTCGCCACAATAGTCTCGTATGCTGTGTCCATATTC
CCCTTTCTTTTTTAGTACCTCTATTCGCTCACTATGTGTATATTGTGTAA
ATTAGACTTTGACTGGCGGTGTTTTTTCACGCTGTTGTATATTGTGTAAT
TCAACCCTCCATAAGTATCTACTGCAACATTAACTGTAATTTGTAGTTTG
TTTTACTGTACCATGAGCACACATCATCATCCCATCCACCAACAAATATT
ACCGAAGCGCCAAGTCTTGAATCTTGATATGAACACAAAGATACATGTAA
GGCTTCGATTCAAAACTGCAGACCTACTATGCGCGCTCTCCGACAAGATA
GGTATAGTCAAGACAGATGAACCGGGCATGATGTGTGAAAAAAAAACAAA
AAAACGTGCGAAGTTGTTTGAATAGCTTGCAATGCTGTACTTGAGAGTCA
GACGTCAAGTTTTGCAGCGTTTTTCACGTTATATCTCATTTAATACGAAT
AGCATACAAATATATATATAGTTTATTGAAATCAAAGAGTCACGTCTTTC
AGTTGGCGTTTGTGTGTATAAAACAGCATATACAATACATGTGTATATTG
TAATCTAAGCATAGCACAATCCACTCTACTTCTGTCGGAACGAACGGCTT
CTATATAATTATATGTCGAAATCAATACGGAGCACCCCTTACTTCACGTC
TGTGTATATCAACGGCTTATATATGTGTACCTCTATATTGACATCTATGG
ATGTATACGGCTTATATAAATGGCACCCGAAAATCAAAGCATAGTATCAT
CCAGTTTACGTCTATGTATATACGAACTCATGTACATATTGATTTCGAAT
CATAACACCATTCAGTTGATGGCTACCTCCATGCATGTTGACCCCAAAGG
TTCTCCTGGATGATCCCGACAATGGACCGTGTCGAGAGGAACACCGACGC
TGCCGGGCGGTGGTCAAAAAGCTGGACGCGGGGGCTAAGCTGCTCGAGAA
GGGGGACGTTGACGGCGCTACACAAGAATGGCGAGCGGCCACCGCACTCG
AGCCGGATAACCCTCTGTTCGTGGGGCCGCTATTGTTAAAGGTGATAATA
CAGTAGAGTACCTGAGGGTTTCGTTGTGACGTGTGTATGATACGGATAGT
CTGTTCGCCTTTTTGATGAGTCGCTCTCTTTCCGAAGGCATGAAGGTGCA
GCACAGTATGTGTGTACAGTCAGTACCGCGCTTTTTTTCGTGTATGTGGA
GGGTATGTGAAGGCTGACACCATGTATGTATTACCATAAAAATAAGTATG
TCTATACAGATGTTTCAAACGTAATGTAAAAAAAAGACCCGCAAGAGTTG
GGGTTGATGTCAGACTGGTGCAGCGTTGCGAGATAACCTTACCTTCGACG
ATACATCCAGGTTCATTTGCAATTACGATTTTTTATCACACCTTAACTAA
ATGGTATCATACTTTCATGTCGATAAATAGTAGGTATGTAAATGTATTTG
GTAGTTTCTGGTACACTCTCAGACTTTTTATTTTATTTTTATGGTTACTC
GGTTACTCGTATTTTACGTGGTCCATTATCAGAGCTGGTCCTTTTACTGT
TCTTTTTTTCTCACAATACTTGACCTTTCACTAACACACAGCAACTCCCC
CATCGCCCTCGCCTTGGTACTCACGTCTTTTCGCGCTCACCACTCGTTCT
TGTGCTACTGCTACGAAACCGCCAACGCGTGCCCCCATCGCCATAATAAT
GACGACGACGCACCAGATCGCGTCCGCCCATGAGGGTGCCAAAAACTGGT
CGGAAATGAAGCGCGCAGCGCAGGAGTGCCTCAATGTCCATCCGGGGGGC
GAGGTGAAGACTAGATTTCGACGAGAACCAGAAAAAAACCTCGTTGAACA
GGATGTTTGTTAACCGGTATTTGGTAGTTTGGGCTAGTCGGTAATCGATC
CTCGATTGTCTCAGCCAGTGCGCATAGGGTGGGGCACCGGTCAAAAGAAA
AAGCGGGCCCAGAGTATAGTGGAGCTACTACTATTAGGCCGCAAAATAGG
TAATGGTACCCTCGCCATAAAAATGGCCTAAACTCGAGTTCACCACTTAT
TTGTGCTCTAAATAATTTATTTTAAGGACTTTCGTTTCATGTCTTGCCAA
CACAAATTGCCTATAGAGTCAAAAAGATTTGATGTATGGCTTTTGTACTT
TTTACCTGACCTGACCGAATATTACGTACGACTGTTAACTAGCTCTTGTT
ACGAATCGGTTCGCGGATGGTCATGTGATAATTTTCGAGTCATGTGATAA
TTTTCGGGTCATGCGAATATATATATATATATAATTTTTATTAAACTAGA
TTTTTCCGAGAACAAAGACACTCAATAGCCGAAAGCGCACGCCCATGTAG
AGCTAGCTCTCCGCGAGATGATGATATGTTTCCAATGGCTTCAATTTTTA
GCATTACAAGCGAAAAATTGTGTTCGAAAAAAATGGAACGACAAAAGAGG
TCGAAACTTGAGACTTACTCTATGTCTTTTTTCTCGTAACTATTACGACT
GGTTTGTGGGTGTGGTCGCGTTAACAATTTTCGTTTTGCCGACTGGCTCA
AGGATAGTCTTGTGAAATGCGCCCCCGGTTATTCGTGGATGGGCGTGTGA
GAATTGCCGACTTAGTGACCGCCCAGTTCGCGGTCGGTCATGCGATGAAT
TCGCAGGTCATCTGAACAGGCTTGAAAATATTGAGCGTAAAGTCGGGTCC
ACCTCTGTAACGGGTTTGTTGCTAACTAGTAATTTGGGCAAGATGAAATT
GGTAACTTACCGCCGTAACCAGTTCTTGGGTTTCTTGTTTGTTCACGTCG
TTGCCTGACTGTGGGTAACACATCAACTCGTTGTCTGACTGTCTTCGCCC
ACTGCAGATTACGCCGTAGATCATCGTACACATGAATGGATATATATATA
TATATATATTACATAAAACATAAAGGACAGCGTAAAAGTTCACGTCTGGG
GGCTCCTGCAGCATTGCAGGCTAATTTGGCGGTTGTTGTTTTCAGTCTCA
AAGATCCTTTAAATCTTCGGCACTTGACGCGCGTTTAACCTGTTCTAGCT
TTTATTTGTTTGTTTTTTAAGGCGTAGACTTGCAGTTTTTGTGGGGTGGG
TTTGGTACGGCATGGTCAGTGTTTTCGTATTGTCACTGATGTACTTCTGT
ATAAAAACGGTAGAGCATACTCAGGCTAGTACGTTTATTGATCTTTATAC
CACAGCACAGTCAGGCGCAATATAGTATATAGTATATAGTATATACAGTT
AGGGGTGCGCCTAACCCCCATTTACAGGCCTACTTGGTTCGACTGAACCG
GGGTGGCGCCTACCCCGCAGGGGAATAAATAACTCTGTTCCGTTAAAGGA
AATGTAGAGATATTTCGGTAACATTATGGAAGCATCGGATAAAGGTTTTT
GCCTCAGCCTTCCGGGGTTGAAAACCCCCCCCAAAAAAACATTCACAGCC
AATTTCTGGCGACAGGGACCACATCGATAAAGCGCCGAATAAAGAAAAAA
AAAGTGTGTATCCCCTGATAGATAATGCCACCTATATCTCACAAAGTATT
TGTATTCGGTGTCGGGTTTCCACGCACTTGTGAGCTGAAATACTCGATAC
AGGTTAGGAGTTGGCTCGTGAGGCTCGACGCACACTGGGGTATGTGCCTA
ATCTAGAGTTTGATCTTATGGGACATTTAATCCGCGTTGTAAGAATTCCA
AACGTCCCAACAAATAGTGTTTTTTTTTGCTACTTTCTCTGTGAAGATGA
TCTTTCGTCACGACTTGATAAATTCATAAAATTAATCCATAGCTGTGGTT
TTCGCGTACACAACGCCAAAAACCGCAGCCCAATCGACGTCCTTGCTGAG
GAGTGTATTTAGTGACAAGATAGCCTATCAACACAAGAAAATAGCCCAAA
CTACTCGAATTTAAACGGGTCAATCAACACCAAAAACGCACCCAAAACTA
CTCGAATTTCGAGTGTAGGAGTAGGCATCCTCTTCGGACGTGAACATTAT
TCACACATGGTCGTTAGGGTTATGTTGGGTGGTCGTAGGGGCATATTCTG
CGTAGCATATTGCGATGGTTGTAGCTCGTTGTTGTAGCCAGCATTCTCAG
CGTCCCAAAGCACTCGAAACTTAGCTTTGAAAAGACAGCTTGCATTACAT
TTTTTTTCTTTTTTTATAAAAGAGGAAGTGTACGTTACATTTAATTATTA
CGATCGTGGAGGATTTATGTGCGTTTACGGTAAGTTGTATGTAGACCGTA
CTATACTGAACTGTAAACGTCTAACCATTGTATTTATCAAAATGTAAATT
GCAACCTTATATACGCTCTCCGGTATACTGAGATACTAGGCTTATTCATG
TGTGCTTGGGATTTACCACTACGTAGAACTCTATAATACGCTTCTCACAT
GTTACGGATATGCTGTACTATCGACCAACCGTCAGTTACACAGATAGTAA
AAACTTGTGCTCGCTATGATGAATATTTGTACCACTGCACTGTTCCACTA
CCTTACCTATATATATATATGTAACTTTACTAATTGTCATCACAGCACTT
GGATTTTATTTCTCGCTTTTCCCTGATTACACTGTACTCTATACCATCAA
TATATAACGCATCATGTTCATCTCTTCGTGCTCACGAATGACTCAAACAC
GGTACGCCACACACGGGTAAAACAATAAACCGGTGAGGCTTCGTAACAAA
TCCGTTTTTATGATTTTTGTTTCGTCGAATTCGGATAGACAATAAATACT
TGAGGGCACACTGACACTTTTGATAATCCCGTTTGATCAGACGTTAACCG
AATCAATGGCAGTTAATTTTTTTTATTACTTCAAATATATGTTTCTTCAA
TTTTGTATTGGCTCGCGTGGTTTGTGGTGATATTCGGGCAGGAGGGCATC
CGCGCGGAGATTGTGCTCGGAGATGTATACATGCAGGAGGAGGAGTTCCA
AGAGGCGGTTCACGCCTTCACAAGGGCGGAGAACATAGGGAAAGAGTCAG
GCGGCGGAGAAGCGCTGGATGACGCGAGGCAGAAGCTGAAAAAGGCGCAG
ATTGCGCTGGAGCAGAGCAAGAAAAAGAACTACTACAAGGTG
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Coding sequence (CDS) from alignment at H-paniculata_contig15062:117..6158+

>mRNA_H-paniculata_contig15062.3007.1 ID=mRNA_H-paniculata_contig15062.3007.1|Name=mRNA_H-paniculata_contig15062.3007.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1506bp|location=Sequence derived from alignment at H-paniculata_contig15062:117..6158+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGCAGCCGCTGACGCCTACGATGCCATCCTTGACGAGCAGCTGGATCT
CGTGGGACCAGGACTTTTGATGAGGAGAGCCAGGTGCCACTTCGCACTAG
GGAAGTGGTTGCAAGCCGCCGCGGATGCCGGACGCGCGGCGAAGCTGGCG
GCGGAAGGGGACATGGACGAGGGTGGCAGCGGCGCACGTGAGCGCGCGGA
GGCGCTAGAGCTGCGGGGTCGATGCTACATCATGCTCGGGGACTTTGAGA
TGGCTGCCAACCATTTTAGACAGCAGGCAGCCGCTGACGCCTACGATGCC
ATCCTTGACGAGCAGCTGGATCTCGTGGGACCAGGACTTTTGATGAGGAG
AGCCAGGTGCCACTTCGCACTAGGGAAGTGGTTGCAAGCCGCCGCGGATG
CCGGACGCGCGGCGAAGCTGGCGGCGGAAGGGGACATGGACGAGGGTGGC
AGCGGCGCACGTGAGCGCGCGGAGGCGCTAGAGCTGCGGGGTCGATGCTA
CATCATGCTCGGGGACTTTGAGATGGCTGCCAACCATTTTAGACAGGTTC
TCCTGGATGATCCCGACAATGGACCGTGTCGAGAGGAACACCGACGCTGC
CGGGCGGTGGTCAAAAAGCTGGACGCGGGGGCTAAGCTGCTCGAGAAGGG
GGACGTTGACGGCGCTACACAAGAATGGCGAGCGGCCACCGCACTCGAGC
CGGATAACCCTCTGTTCGTGGGGCCGCTATTGTTAAAGGTTCTCCTGGAT
GATCCCGACAATGGACCGTGTCGAGAGGAACACCGACGCTGCCGGGCGGT
GGTCAAAAAGCTGGACGCGGGGGCTAAGCTGCTCGAGAAGGGGGACGTTG
ACGGCGCTACACAAGAATGGCGAGCGGCCACCGCACTCGAGCCGGATAAC
CCTCTGTTCGTGGGGCCGCTATTGTTAAAGATCGCGTCCGCCCATGAGGG
TGCCAAAAACTGGTCGGAAATGAAGCGCGCAGCGCAGGAGTGCCTCAATG
TCCATCCGGGGGGCGAGATCGCGTCCGCCCATGAGGGTGCCAAAAACTGG
TCGGAAATGAAGCGCGCAGCGCAGGAGTGCCTCAATGTCCATCCGGGGGG
CGAGGAGGGCATCCGCGCGGAGATTGTGCTCGGAGATGTATACATGCAGG
AGGAGGAGTTCCAAGAGGCGGTTCACGCCTTCACAAGGGCGGAGAACATA
GGGAAAGAGTCAGGCGGCGGAGAAGCGCTGGATGACGCGAGGCAGAAGCT
GAAAAAGGCGCAGATTGCGCTGGAGCAGAGCAAGAAAAAGAACTACTACA
AGGTGGAGGGCATCCGCGCGGAGATTGTGCTCGGAGATGTATACATGCAG
GAGGAGGAGTTCCAAGAGGCGGTTCACGCCTTCACAAGGGCGGAGAACAT
AGGGAAAGAGTCAGGCGGCGGAGAAGCGCTGGATGACGCGAGGCAGAAGC
TGAAAAAGGCGCAGATTGCGCTGGAGCAGAGCAAGAAAAAGAACTACTAC
AAGGTG
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