mRNA_H-paniculata_contig15060.3005.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig15060.3005.1
Unique NamemRNA_H-paniculata_contig15060.3005.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig15060.3005.1 vs. uniprot
Match: A0A6H5KL37_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL37_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 7.910e-49
Identity = 107/234 (45.73%), Postives = 144/234 (61.54%), Query Frame = 1
Query:   22 KSIGSRWVFKVKSDNSYKARVMGQGWGQEASRDYGNIDSPVYRIQSVRMVTTVAAEMDLDVIQLDAQTAFLNAPLKEEVYVPLPLAFE---KTGSVTDVPLVMKLLLSLYDLRQSPQNWWVTMDRYFGEIEFVALKSDRCVYVYIAKDDGEV--TAFVTSKL-----SKVAVILTLYLMKRLKMTDLGDVYLVLGMKITWDGKIGTLSINQSGYTKGILEKFVIDKCNPATTPG 693
            K I S+WVFK K+  S+K R++ QGW Q    D GN  +PV R QS+RM+  +A + +L++ Q+D  TAFL A + E V+V  P  FE   K G      LVM+L  SLY L QSP NW+ T+D +  EI FV LKSD CVY+Y   DD +V  T +V   L     S+   ++   L +R KMTD+G+V LVLGM+I  D   GTL+I+Q  Y+K ILE+F + +C P +TPG
Sbjct:  504 KRIKSKWVFKRKAGGSFKGRLVAQGWNQVPGLDCGNTYAPVCRFQSIRMLACIAVQFNLELDQMDVSTAFLYADILENVFVEQPPGFEVKDKDGG----DLVMQLQKSLYGLAQSPSNWFHTIDPFLVEIGFVPLKSDTCVYLY-DHDDVQVYLTLYVDDLLLAGNNSRAISMIKKKLTQRFKMTDMGEVKLVLGMEIKRDRNQGTLTISQEAYSKSILERFGMSECKPTSTPG 732          
BLAST of mRNA_H-paniculata_contig15060.3005.1 vs. uniprot
Match: A0A6H5JIN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIN1_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 9.840e-44
Identity = 96/227 (42.29%), Postives = 134/227 (59.03%), Query Frame = 1
Query:   22 KSIGSRWVFKVKSDNSYKARVMGQGWGQEASRDYGNIDSPVYRIQSVRMVTTVAAEMDLDVIQLDAQTAFLNAPLKEEVYVPLPLAFE---KTGSVTDVPLVMKLLLSLYDLRQSPQNWWVTMDRYFGEIEFVALKSDRCVYVYIAKDDGEVTAFVTSKLSKVAVILTLYLMKRLKMTDLGDVYLVLGMKITWDGKIGTLSINQSGYTKGILEKFVIDKCNPATTPG 693
            K I SRWVFK K D S+K R++ QGW Q    D G+  +PV R+QS+RM+  +A + +L++ Q+D  TAFL A + E V+V  P  FE   K G      LVM+L  SLY L QSP NW+ T+D +  EI ++ L  D  +   +A ++    + +  KL +           R KMTD+G+V LVLGM+I  D   GTL+I+Q  YTK ILE+F + +C P +TPG
Sbjct:  881 KRIKSRWVFKRKVDGSFKGRLVAQGWNQVPGLDCGSTYAPVCRLQSIRMLACIAVQFNLELDQMDVSTAFLYADILENVFVEQPPGFEVKDKDGG----DLVMQLQKSLYGLAQSPSNWFHTIDPFLVEIVYLTLYVDDLL---LASNNSNAISMIKKKLKQ-----------RFKMTDMGEVKLVLGMEIKRDRNQGTLTISQEAYTKSILERFGMSECKPTSTPG 1089          
BLAST of mRNA_H-paniculata_contig15060.3005.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 2.170e-35
Identity = 73/139 (52.52%), Postives = 97/139 (69.78%), Query Frame = 1
Query:   28 IGSRWVFKVKSDNSYKARVMGQGWGQEASRDYGNIDSPVYRIQSVRMVTTVAAEMDLDVIQLDAQTAFLNAPLKEEVYVPLPLAFEKTGSVTDVPLVMKLLLSLYDLRQSPQNWWVTMDRYFGEIEFVALKSDRCVYVY 444
            IGS+WVFKVK +N++KAR++ +GW Q   RD G   +PV R+QS+RMV  +AAE DLDVIQLD +TAFL A ++E V+V +   +E   ++ ++ LVMKL  SL  L QSPQ+W  T+D    EI F  LKSD CVY+Y
Sbjct:  349 IGSKWVFKVKPENTHKARLVAKGWNQVPGRDCGGTFAPVCRLQSIRMVFAIAAEKDLDVIQLDVKTAFLYADIEENVFVEMAPGYE-AKNMEELQLVMKLEKSLDGLAQSPQDWLKTIDSSLVEIGFFPLKSDTCVYIY 486          
BLAST of mRNA_H-paniculata_contig15060.3005.1 vs. uniprot
Match: A0A6H5KL30_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL30_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 1.240e-34
Identity = 90/229 (39.30%), Postives = 124/229 (54.15%), Query Frame = 1
Query:   34 SRWVFKVKSDNSYKARVMGQGWGQEASRDYGNIDSPVYRIQSVRMVTTVAAEMDLDVIQLDAQTAFLNAPLKEEVYVPLPLAFEKTGSVTDVPLVMKLLLSLYDLRQSPQNWWVTMDRYFGEIEFVALKSDRCVYVYIAKDDGEVTAFVTSKL---------SKVAVILTLYLMKRLKMTDLGDVYLVLGMKITWDGKIGTLSINQSGYTKGILEKFVIDKCNPATTPG 693
            S+WVFK K+  S+K R++ QGW Q    D G+  +P                    + Q+D  TAFL A + E V V  P  FE  G      LVM+L  SLY L QSP NW+ T+D +  EI FV L+SD CVY+Y   D  +V  F+T  +         + V +++   L +R KMTD+G+V LVLGM+I  D   GTL+ +Q  Y+K ILE+F + +  P +TPG
Sbjct:  820 SKWVFKRKAGGSFKRRLVAQGWNQVPGLDCGSTYAP-------------PCNSTWSLFQMDLSTAFLCADILENVLVEQPPGFEVNGK-DGGDLVMQLQKSLYGLAQSPSNWFHTIDPFLVEIGFVPLQSDTCVYLY---DHDDVQVFLTLYVDDLLLAGNNANVMLMIKNKLKQRSKMTDMGEVKLVLGMEIKRDRNQGTLTTSQEAYSKSILERFGMSERKPTSTPG 1031          
BLAST of mRNA_H-paniculata_contig15060.3005.1 vs. uniprot
Match: A0A6G0WHK2_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHK2_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.410e-32
Identity = 79/236 (33.47%), Postives = 130/236 (55.08%), Query Frame = 1
Query:   22 KSIGSRWVFKVK-----SDNSYKARVMGQGWGQEASRDYGNIDSPVYRIQSVRMVTTVAAEMDLDVIQLDAQTAFLNAPLKEEVYVPLPLAFEKTGSVTDVPLVMKLLLSLYDLRQSPQNWWVTMDRYFGEIEFVALKSDRCVYVYIAKDDGEVTAF------VTSKLSKVAVILTLYLMKRLKMTDLGDVYLVLGMKITWDGKIGTLSINQSGYTKGILEKFVIDKCNPATTPGN 696
            K+IG +WVFKVK     S + YKAR++ +G+ Q    DY    +PV +  S+R++ ++AA+ +L++ Q+D  TAFLN+ L E++Y+ +P+      +      V+KL  SLY L+Q+P+ W  T+D +   I FV  K+D C+Y+    +D  + +       + S   ++     + L KR KMTDLG +   LG++I      G++ I+QS + K +L KF +        P N
Sbjct:   87 KAIGCKWVFKVKEKADGSIDKYKARLVAKGYSQTFGIDYEETFTPVAKFTSIRVLLSLAAKHNLELQQMDVNTAFLNSDLDEDIYMEIPMGLNDHKNPGLSKPVLKLKKSLYGLKQAPRLWNQTIDGFMLSIGFVKSKADHCIYIKRQDEDIILVSLYVDDLILASNSDEMMQTTKIALSKRFKMTDLGPLSYCLGIEIVRSPS-GSVFIHQSKFLKSVLTKFYMQDSKKVHVPNN 321          
BLAST of mRNA_H-paniculata_contig15060.3005.1 vs. uniprot
Match: A0A225WDK2_9STRA (Integrase, catalytic core protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WDK2_9STRA)

HSP 1 Score: 132 bits (332), Expect = 5.620e-32
Identity = 83/238 (34.87%), Postives = 131/238 (55.04%), Query Frame = 1
Query:   22 KSIGSRWVFKVKSD-----NSYKARVMGQGWGQEASRDYGNIDSPVYRIQSVRMVTTVAAEMDLDVIQLDAQTAFLNAPLKEEVYVPLPLAFEKTGSVTDVPLVMKLLLSLYDLRQSPQNWWVTMDRYFGEIEFVALKSDRCVYVY----------IAKDDGEVTAFVTSKLSKVAVILTLYLMKRLKMTDLGDVYLVLGMKITWDGKIGTLSINQSGYTKGILEKFVIDKCNPATTP 690
            +++ S+W+FK+K D       YKAR++ +G+ Q    DY  I +PV R++S+R++  + A  D +  Q D  TAFLN  L EEVY+  P   E+ G      LV +LL +LY L+Q+P+ W   +  Y     FV L SD C+YV           I  DD  + A   S++ ++  +L+       K  D+G V+ +LG+++  +  + TLSI+Q+ Y KG++EKF + + NP  TP
Sbjct:   83 RALTSKWIFKIKYDALGNIERYKARLVIRGYEQIKYIDYEEIFAPVIRLESLRLLLALVAINDWECEQTDVDTAFLNGDLAEEVYMIQPEGLEEAGKED---LVCQLLQALYGLKQAPRAWHKKLTDYLKSKGFVKLDSDSCIYVRTGGSGVAIIGIYVDDLLLIADTASRIQEMKSMLS----AGFKCKDMGAVHHILGLRVKRNRALKTLSIDQTAYAKGVIEKFNLMQLNPCKTP 313          
BLAST of mRNA_H-paniculata_contig15060.3005.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 1.210e-31
Identity = 78/226 (34.51%), Postives = 127/226 (56.19%), Query Frame = 1
Query:   34 SRWVFKVKSDNSYKARVMGQGWGQEASRDYGNIDSPVYRIQSVRMVTTVAAEMDLDVIQLDAQTAFLNAPLKEEVYVPLPLAFEKTGSVTDVPLVMKLLLSLYDLRQSPQNWWVTMDRYFGEIEFVALKSDRCVYVYIAKDDGEVTAF------VTSKLSKVAVILTLYLMKRLKMTDLGDVYLVLGMKITWDGKIGTLSINQSGYTKGILEKFVIDKCNPATTPG 693
            +R+VFK+K+D+ +KAR++  G  Q A R +G   +PV R+ S+RM+  +A E   +V QLD   AFLNA    +VYV      E+    T   +V KL  SLY L QSP  W   ++       +   +SD CVY++++ D+  + A       +T    ++       LM   +MTD+G+V  V+G+++  D + GTL+I+Q  Y + IL+++ +++ NP +TPG
Sbjct:  268 TRFVFKIKADSRFKARLVAGGHRQRAGRHFGRNYAPVTRLGSIRMLFAIACEHGWEVYQLDVVAAFLNAYTDRDVYVRPAPGDEERDPTTGEMMVYKLEKSLYGLSQSPSLWNDAINDRLIIFGWQRTRSDPCVYIFVSGDELTILAIYVDDILITGGNKEIVSRKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPG 493          
BLAST of mRNA_H-paniculata_contig15060.3005.1 vs. uniprot
Match: A0A8J5YVE7_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YVE7_9ROSI)

HSP 1 Score: 132 bits (331), Expect = 1.310e-31
Identity = 77/229 (33.62%), Postives = 125/229 (54.59%), Query Frame = 1
Query:   22 KSIGSRWVFKVKS------DNSYKARVMGQGWGQEASRDYGNIDSPVYRIQSVRMVTTVAAEMDLDVIQLDAQTAFLNAPLKEEVYVPLPLAFEKTGSVTDVPLVMKLLLSLYDLRQSPQNWWVTMDRYFGEIEFVALKSDRCVYVYIAKDDGEV-------TAFVTSKLSKVAVILTLYLMKRLKMTDLGDVYLVLGMKITWDGKIGTLSINQSGYTKGILEKFVIDK 669
            ++IG +WVF  K       D  YKAR++ +G+ Q+   DY ++ SPV +  S+R++  + A+++L++ QLD  TAFL+  L+EE+Y+  P  +E  G +     V KL  SLY L+QSP+ W+   D +    ++   K D CVY+    D   +          + SK  K    L   L +  +M DLG+V  +LGM+I+ D + G L +NQ  Y K +L+ F +++
Sbjct:  310 RAIGCKWVFAKKDRSPSKKDVRYKARLVAKGYAQKEGIDYNDVFSPVVKHSSIRILLALVAQLNLELAQLDVNTAFLHGELEEEIYMTQPEGYEDAGGIN---WVCKLNKSLYGLKQSPRQWYKRFDSFMRRQKYTRSKYDNCVYLQKLHDRSFIYLLLYVDDMLIASKSQKEIDKLKAQLNEEFEMKDLGEVKKILGMEISRDRQKGKLCLNQKQYLKKVLQCFGVNE 535          
BLAST of mRNA_H-paniculata_contig15060.3005.1 vs. uniprot
Match: A0A6H5KXM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXM1_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 2.530e-31
Identity = 96/233 (41.20%), Postives = 126/233 (54.08%), Query Frame = 1
Query:   73 KARVMGQG--WGQEASRDYGNI-DSPVY-------------RIQSVRMVTTVAAEMDLDVIQLDAQTAFLNAPLKEEVYVPLPLAFE---KTGSVTDVPLVMKLLLSLYDLRQSPQNWWVTMDRYFGEIEFVALKSDRCVYVYIAKDDGEV--TAFVTSKL-----SKVAVILTLYLMKRLKMTDLGDVYLVLGMKITWDGKIGTLSINQSGYTKGILEKFVIDKCNPATTPG 693
            +AR M  G  W   A R+  N+ +  VY             RI+S  +   V   ++LD  Q+D  TAFL A + E V+V  P  FE   K G      LVM+L  SLY L QSP NW+ T+D +  EI FV LKSD CVY+Y   DD +V  T +V   L     S    ++   L +R KMTD+G+V LVLGM+I  D   G L+I+Q  YTK ILE+F + +C P +TPG
Sbjct:  618 EARAMSDGEQWNAAAEREIANMKERQVYKLVPRTAVPPGRKRIKSKWVFKPVQFNLELD--QMDLSTAFLYADILENVFVEQPPGFEVKDKDGG----DLVMQLQKSLYGLAQSPSNWFHTIDPFLVEIGFVPLKSDTCVYLY-DHDDVQVYLTLYVDDLLLAGNNSNAISMIKKKLKQRFKMTDMGEVKLVLGMEIKRDRNQGALTISQEAYTKSILERFGMSECKPTSTPG 843          
BLAST of mRNA_H-paniculata_contig15060.3005.1 vs. uniprot
Match: A0A6A3HNZ7_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3HNZ7_9STRA)

HSP 1 Score: 130 bits (327), Expect = 2.650e-31
Identity = 83/236 (35.17%), Postives = 137/236 (58.05%), Query Frame = 1
Query:   22 KSIGSRWVFKVK-----SDNSYKARVMGQGWGQEASRDYGNIDSPVYRIQSVRMVTTVAAEMDLDVIQLDAQTAFLNAPLKEEVYVPLPLAFEKTGSVTDVPLVMKLLLSLYDLRQSPQNWWVTMDRYFGEIEFVALKSDRCVYVYIAKDDGE---VTAFVTSKLSKVAVILTLYLMKRL-----KMTDLGDVYLVLGMKITWDGKIGTLSINQSGYTKGILEKFVIDKCNPATTP 690
            K + +RWVF+VK     + + +KAR++ +G+ Q    DY  + SPV R++S+R++ T+AA  + +V Q+D  TAFLN  +  EVY+  P  F+  G       V +LL SLY L+Q+P+ W+  +  +  E  F  LK++ CV V +   DG+   +  +V   +     I  +  MKR+     +M DLG+++ +LG ++T + +  T+ I+QS YTK +LE+F ++KCN   TP
Sbjct:  320 KVLRNRWVFRVKYLADGNIDRFKARLVIKGFMQVCGIDYLEVYSPVVRLESLRVLLTLAAVWNYEVHQMDVTTAFLNGKIDVEVYMEQPEGFKVPGKEN---WVCRLLKSLYGLKQAPRVWFQLLKAFLEEQGFALLKAEACVAVKVI--DGQLVFIPLYVDDLILFAPNIKLINEMKRMFIERFEMKDLGELHYILGWEVTRNRQERTIFISQSKYTKAVLERFNMEKCNGCKTP 550          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15060.3005.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KL37_9PHAE7.910e-4945.73Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JIN1_9PHAE9.840e-4442.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L6R7_9PHAE2.170e-3552.52Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KL30_9PHAE1.240e-3439.30Integrase catalytic domain-containing protein n=1 ... [more]
A0A6G0WHK2_9STRA1.410e-3233.47Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A225WDK2_9STRA5.620e-3234.87Integrase, catalytic core protein n=1 Tax=Phytopht... [more]
A0A6H5JF46_9PHAE1.210e-3134.51Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8J5YVE7_9ROSI1.310e-3133.62Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KXM1_9PHAE2.530e-3141.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6A3HNZ7_9STRA2.650e-3135.17Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15060contigH-paniculata_contig15060:4513..5267 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score132.9
Seed ortholog evalue1.9e-28
Seed eggNOG ortholog67593.Physo141588
Hectar predicted targeting categoryother localisation
EggNOG free text desc.gag-polypeptide of LTR copia-type
EggNOG OGs3QHJF@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons2
Model size696
Cds size696
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929207.9626586-CDS-H-paniculata_contig15060:4512..46861622929207.9626586-CDS-H-paniculata_contig15060:4512..4686Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15060 4513..4686 -
1691480770.6170852-CDS-H-paniculata_contig15060:4512..46861691480770.6170852-CDS-H-paniculata_contig15060:4512..4686Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15060 4513..4686 -
1622929207.9789484-CDS-H-paniculata_contig15060:4745..52671622929207.9789484-CDS-H-paniculata_contig15060:4745..5267Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15060 4746..5267 -
1691480770.6284733-CDS-H-paniculata_contig15060:4745..52671691480770.6284733-CDS-H-paniculata_contig15060:4745..5267Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15060 4746..5267 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15060.3005.1prot_H-paniculata_contig15060.3005.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig15060 4513..5267 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig15060.3005.1

>prot_H-paniculata_contig15060.3005.1 ID=prot_H-paniculata_contig15060.3005.1|Name=mRNA_H-paniculata_contig15060.3005.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=232bp
DQNNSRPKSIGSRWVFKVKSDNSYKARVMGQGWGQEASRDYGNIDSPVYR
IQSVRMVTTVAAEMDLDVIQLDAQTAFLNAPLKEEVYVPLPLAFEKTGSV
TDVPLVMKLLLSLYDLRQSPQNWWVTMDRYFGEIEFVALKSDRCVYVYIA
KDDGEVTAFVTSKLSKVAVILTLYLMKRLKMTDLGDVYLVLGMKITWDGK
IGTLSINQSGYTKGILEKFVIDKCNPATTPGN
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mRNA from alignment at H-paniculata_contig15060:4513..5267-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig15060.3005.1 ID=mRNA_H-paniculata_contig15060.3005.1|Name=mRNA_H-paniculata_contig15060.3005.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=755bp|location=Sequence derived from alignment at H-paniculata_contig15060:4513..5267- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACCAAAACAACAGCAGGCCTAAGAGCATCGGGTCGCGTTGGGTGTTCAA AGTAAAATCCGACAACTCATATAAAGCTCGGGTTATGGGCCAGGGCTGGG GGCAAGAAGCTAGTCGAGACTACGGGAATATAGATTCACCAGTATACCGC ATCCAAAGTGTCCGCATGGTCACGACCGTGGCTGCTGAAATGGATCTGGA CGTCATTCAACTTGATGCCCAAACCGCTTTCCTAAATGCACCACTGAAGG AGGAAGTATACGTGCCTCTACCGCTCGCTTTCGAGAAAACGGGCAGCGTG ACAGATGTGCCGCTCGTGATGAAACTTCTTCTATCGCTCTATGATCTCCG GCAGTCTCCACAGAACTGGTGGGTTACGATGGATAGATACTTTGGAGAGA TTGAATTTGTGGCTCTCAAGTCTGATCGCTGCGTGTATGTCTATATCGCA AAAGACGATGGGGAGGTGACGGCATTTGTTACGAGCAAACTCAGCAAGGT TGCTGTCATTCTTACGCTCTACGTGGACGTTTGCTCATGGCTGGCAAGGA TAAGGCGATCCTGGTCAACCTCAAGAAGAAGCTTATGAAGAGGTTGAAGA TGACCGATCTGGGCGATGTTTATTTGGTCTTAGGGATGAAAATTACCTGG GACGGAAAGATTGGTACGCTGAGCATCAATCAATCGGGATACACAAAGGG TATTCTGGAGAAATTCGTGATCGACAAGTGCAATCCAGCAACAACACCCG GAAAC
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Coding sequence (CDS) from alignment at H-paniculata_contig15060:4513..5267-

>mRNA_H-paniculata_contig15060.3005.1 ID=mRNA_H-paniculata_contig15060.3005.1|Name=mRNA_H-paniculata_contig15060.3005.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1392bp|location=Sequence derived from alignment at H-paniculata_contig15060:4513..5267- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACCAAAACAACAGCAGGCCTAAGAGCATCGGGTCGCGTTGGGTGTTCAA
AGTAAAATCCGACAACTCATATAAAGCTCGGGTTATGGGCCAGGGCTGGG
GGCAAGAAGCTAGTCGAGACTACGGGAATATAGATTCACCAGTATACCGC
ATCCAAAGTGTCCGCATGGTCACGACCGTGGCTGCTGAAATGGATCTGGA
CGTCATTCAACTTGATGCCCAAACCGCTTTCCTAAATGCACCACTGAAGG
AGGAAGTATACGTGCCTCTACCGCTCGCTTTCGAGAAAACGGGCAGCGTG
ACAGATGTGCCGCTCGTGATGAAACTTCTTCTATCGCTCTATGATCTCCG
GCAGTCTCCACAGAACTGGTGGGTTACGATGGATAGATACTTTGGAGAGA
TTGAATTTGTGGCTCTCAAGTCTGATCGCTGCGTGTATGTCTATATCGCA
AAAGACGATGGGGAGGTGACGGCATTTGTTACGAGCAAACTCAGCAAGGT
TGCTGTCATTCTTACGCTCTACGACCAAAACAACAGCAGGCCTAAGAGCA
TCGGGTCGCGTTGGGTGTTCAAAGTAAAATCCGACAACTCATATAAAGCT
CGGGTTATGGGCCAGGGCTGGGGGCAAGAAGCTAGTCGAGACTACGGGAA
TATAGATTCACCAGTATACCGCATCCAAAGTGTCCGCATGGTCACGACCG
TGGCTGCTGAAATGGATCTGGACGTCATTCAACTTGATGCCCAAACCGCT
TTCCTAAATGCACCACTGAAGGAGGAAGTATACGTGCCTCTACCGCTCGC
TTTCGAGAAAACGGGCAGCGTGACAGATGTGCCGCTCGTGATGAAACTTC
TTCTATCGCTCTATGATCTCCGGCAGTCTCCACAGAACTGGTGGGTTACG
ATGGATAGATACTTTGGAGAGATTGAATTTGTGGCTCTCAAGTCTGATCG
CTGCGTGTATGTCTATATCGCAAAAGACGATGGGGAGGTGACGGCATTTG
TTACGAGCAAACTCAGCAAGGTTGCTGTCATTCTTACGCTCTACCTTATG
AAGAGGTTGAAGATGACCGATCTGGGCGATGTTTATTTGGTCTTAGGGAT
GAAAATTACCTGGGACGGAAAGATTGGTACGCTGAGCATCAATCAATCGG
GATACACAAAGGGTATTCTGGAGAAATTCGTGATCGACAAGTGCAATCCA
GCAACAACACCCGGAAACCTTATGAAGAGGTTGAAGATGACCGATCTGGG
CGATGTTTATTTGGTCTTAGGGATGAAAATTACCTGGGACGGAAAGATTG
GTACGCTGAGCATCAATCAATCGGGATACACAAAGGGTATTCTGGAGAAA
TTCGTGATCGACAAGTGCAATCCAGCAACAACACCCGGAAAC
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