mRNA_H-paniculata_contig1502.2988.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1502.2988.1
Unique NamemRNA_H-paniculata_contig1502.2988.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig1502.2988.1 vs. uniprot
Match: A0A8D1A7H5_PIG (40S ribosomal protein S7 n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D1A7H5_PIG)

HSP 1 Score: 354 bits (908), Expect = 1.820e-119
Identity = 181/191 (94.76%), Postives = 188/191 (98.43%), Query Frame = 1 
Query:    1 MFTGATKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSDIRDLYITGAKQVDVGGGKKAIIIYVPYRLLRSYHKIQQRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGIRPRSRTLTSVQDSMLEDLVFPTEIVGKRTRCKIDGSKILKVQLDPKDQVNVETKLDTFSSVYKKMTNKDVVFEFPV 573
            MFTGA KIVKPEGQEADEFEQTVAQELFNLEMSAADIKS+IRDLYITGAKQVDVGGGKKAIII+VPYRLLRSYHKIQ RLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQG RPRSRTLT+VQD+MLEDLVFPTEIVGKRTRCK+DGSKILKVQLDPKDQVNVETKLDTFSSVYKK+TNKDVVFEFP+
Sbjct:    1 MFTGAIKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGTRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKVDGSKILKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPL 191
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BLAST of mRNA_H-paniculata_contig1502.2988.1 vs. uniprot
Match: D7G463_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G463_ECTSI)

HSP 1 Score: 363 bits (933), Expect = 4.070e-116
Identity = 186/194 (95.88%), Postives = 192/194 (98.97%), Query Frame = 1 
Query:    1 MFTGATKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSDIRDLYITGAKQVDVGGGKKAIIIYVPYRLLRSYHKIQQRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGIRPRSRTLTSVQDSMLEDLVFPTEIVGKRTRCKIDGSKILKVQLDPKDQVNVETKLDTFSSVYKKMTNKDVVFEFPVQEP 582
            MFTGATKIVKPEGQEADEFEQ VAQELFNLEMSAADIK+DIRDLYITGAKQVDVGGGKKAIII+VPYRLLRSYHKIQ RLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGIRPRSRTLT+VQD+MLEDLVFPTEIVGKRTRCKIDGSK+LKVQLDPKDQVNVETKLDTFSSVYKK+TNKDVVFEFPVQEP
Sbjct:  519 MFTGATKIVKPEGQEADEFEQQVAQELFNLEMSAADIKADIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGIRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKIDGSKLLKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQEP 712
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BLAST of mRNA_H-paniculata_contig1502.2988.1 vs. uniprot
Match: A0A7S2XZE0_9STRA (40S ribosomal protein S7 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZE0_9STRA)

HSP 1 Score: 308 bits (789), Expect = 4.870e-101
Identity = 154/192 (80.21%), Postives = 177/192 (92.19%), Query Frame = 1 
Query:    4 FTGATKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSDIRDLYITGAKQVDVGGGKKAIIIYVPYRLLRSYHKIQQRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGIRPRSRTLTSVQDSMLEDLVFPTEIVGKRTRCKIDGSKILKVQLDPKDQVNVETKLDTFSSVYKKMTNKDVVFEFPVQE 579
            FTGA KIVKP GQE D+FE++VAQEL+NLEMSAA++K+++RDLYIT AK+V+VGGGKKAIII VPY  LR++HKIQ RLVRELEKKFSGRHVV+IA RTILGKSY RSTKT+G RPRSRTLT VQ+ +LEDLV+PTEIVGKRT+CK+DGSKILKV LDPKDQVNVETKLDTFS VYKK+TNKDVVF+FP+QE
Sbjct:   25 FTGAKKIVKPAGQEIDDFEKSVAQELYNLEMSAAELKAELRDLYITAAKEVEVGGGKKAIIIVVPYVKLRAFHKIQLRLVRELEKKFSGRHVVVIAQRTILGKSYTRSTKTKGPRPRSRTLTHVQEQILEDLVYPTEIVGKRTKCKLDGSKILKVLLDPKDQVNVETKLDTFSFVYKKLTNKDVVFQFPIQE 216
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BLAST of mRNA_H-paniculata_contig1502.2988.1 vs. uniprot
Match: A0A836C8B1_9STRA (40S ribosomal protein S7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8B1_9STRA)

HSP 1 Score: 304 bits (779), Expect = 6.450e-100
Identity = 150/186 (80.65%), Postives = 177/186 (95.16%), Query Frame = 1 
Query:   22 IVKPEGQEADEFEQTVAQELFNLEMSAADIKSDIRDLYITGAKQVDVGGGKKAIIIYVPYRLLRSYHKIQQRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGIRPRSRTLTSVQDSMLEDLVFPTEIVGKRTRCKIDGSKILKVQLDPKDQVNVETKLDTFSSVYKKMTNKDVVFEFPVQE 579
            IVKPEGQ ADEFEQTVAQEL+NL+MSAA+IK+D++DLYIT AKQV++ GGKKAII++VPYRLLR++HKIQ RLV ELEKKFSGRHVVIIA RTILGK++AR++KT+G RPRSRTLT+VQD++LEDLV+PTEIVGKRTRC++DG+K+LKV LDPKDQVNVETKLDTFS VYKK+TNK+VVFEFPVQE
Sbjct:    6 IVKPEGQAADEFEQTVAQELYNLQMSAAEIKADLKDLYITSAKQVELAGGKKAIILFVPYRLLRAFHKIQARLVPELEKKFSGRHVVIIAQRTILGKNFARNSKTKGPRPRSRTLTAVQDAILEDLVYPTEIVGKRTRCRVDGTKLLKVHLDPKDQVNVETKLDTFSYVYKKLTNKEVVFEFPVQE 191
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BLAST of mRNA_H-paniculata_contig1502.2988.1 vs. uniprot
Match: A0A6T5NXM7_HETAK (40S ribosomal protein S7 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5NXM7_HETAK)

HSP 1 Score: 303 bits (775), Expect = 6.840e-99
Identity = 153/193 (79.27%), Postives = 173/193 (89.64%), Query Frame = 1 
Query:    1 MFTGATKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSDIRDLYITGAKQVDVGGGKKAIIIYVPYRLLRSYHKIQQRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGIRPRSRTLTSVQDSMLEDLVFPTEIVGKRTRCKIDGSKILKVQLDPKDQVNVETKLDTFSSVYKKMTNKDVVFEFPVQE 579
            M  G+ KIVKP GQE DEFE  VAQELFNLEMSA +IK+D+RDLYIT AK+VDVG GKKAII+ VPY+LLR +++IQ RLVRELEKKFSGRHVVIIA RTILGKSYARSTKT+G+RPRSRTLT+VQDS+LEDLV+PTEIVGKRTRC + G K+LKV LDPKDQVNVETKLDTF+ VYKK+TNKDV F+FPVQE
Sbjct:   26 MSLGSKKIVKPPGQEPDEFEAQVAQELFNLEMSAVEIKADLRDLYITAAKEVDVGPGKKAIIVVVPYKLLRKFNRIQIRLVRELEKKFSGRHVVIIAQRTILGKSYARSTKTKGLRPRSRTLTAVQDSILEDLVYPTEIVGKRTRCAVSGEKLLKVYLDPKDQVNVETKLDTFAYVYKKLTNKDVSFQFPVQE 218
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BLAST of mRNA_H-paniculata_contig1502.2988.1 vs. uniprot
Match: A0A662XBL9_9STRA (40S ribosomal protein S7 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XBL9_9STRA)

HSP 1 Score: 292 bits (747), Expect = 4.960e-95
Identity = 144/193 (74.61%), Postives = 173/193 (89.64%), Query Frame = 1 
Query:    1 MFTGATKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSDIRDLYITGAKQVDVGGGKKAIIIYVPYRLLRSYHKIQQRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGIRPRSRTLTSVQDSMLEDLVFPTEIVGKRTRCKIDGSKILKVQLDPKDQVNVETKLDTFSSVYKKMTNKDVVFEFPVQE 579
            MFTG +KIVKPEGQ  DEFEQ VAQEL+NLE+SAA+IK+D++DLYIT AKQVD+  G+KAI+I+VP+RL  S+ KIQ RLVRELEKKFSGRHV+IIA RTILGK +AR+ KT G RPRSRTLT+VQ+++L+DLV+PTEIVGKRTR ++D SK+LKV LDPKDQVNVETKLDTF++VYKK+TNKDVVFEFPV +
Sbjct:    1 MFTGRSKIVKPEGQTPDEFEQQVAQELYNLELSAAEIKNDLKDLYITAAKQVDISSGRKAIVIFVPFRLHASFKKIQARLVRELEKKFSGRHVIIIAQRTILGKGFARANKTSGPRPRSRTLTAVQEAILDDLVYPTEIVGKRTRVRLDSSKLLKVFLDPKDQVNVETKLDTFATVYKKLTNKDVVFEFPVHQ 193
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BLAST of mRNA_H-paniculata_contig1502.2988.1 vs. uniprot
Match: H3G9W8_PHYRM (40S ribosomal protein S7 n=21 Tax=Peronosporaceae TaxID=4777 RepID=H3G9W8_PHYRM)

HSP 1 Score: 290 bits (742), Expect = 2.460e-94
Identity = 146/189 (77.25%), Postives = 168/189 (88.89%), Query Frame = 1 
Query:   13 ATKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSDIRDLYITGAKQVDVGGGKKAIIIYVPYRLLRSYHKIQQRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGIRPRSRTLTSVQDSMLEDLVFPTEIVGKRTRCKIDGSKILKVQLDPKDQVNVETKLDTFSSVYKKMTNKDVVFEFPVQE 579
            A+KIVKPEGQ ADEFE  VAQELFNLE SAA+IK+D++DLYIT AKQVD+  G+KAI+I+VP+RL  S+ KIQ RLVRELEKKFSGRHVVIIA RTILGK Y+R+    G RPRSRTLT VQ+ +L+DLVFPTEIVGKRTRC++DGSK+LKV LDPKDQVNVETKLDTF++VYKK+TNKDVVFEFPVQE
Sbjct:    2 ASKIVKPEGQTADEFELQVAQELFNLEQSAAEIKTDLKDLYITAAKQVDISSGRKAIVIFVPFRLHASFKKIQARLVRELEKKFSGRHVVIIAQRTILGKGYSRANHGAGPRPRSRTLTHVQEQILDDLVFPTEIVGKRTRCRLDGSKLLKVHLDPKDQVNVETKLDTFATVYKKLTNKDVVFEFPVQE 190
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BLAST of mRNA_H-paniculata_contig1502.2988.1 vs. uniprot
Match: A0A2D4C6D5_PYTIN (40S ribosomal protein S7 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6D5_PYTIN)

HSP 1 Score: 289 bits (740), Expect = 5.670e-94
Identity = 142/193 (73.58%), Postives = 171/193 (88.60%), Query Frame = 1 
Query:    1 MFTGATKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSDIRDLYITGAKQVDVGGGKKAIIIYVPYRLLRSYHKIQQRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGIRPRSRTLTSVQDSMLEDLVFPTEIVGKRTRCKIDGSKILKVQLDPKDQVNVETKLDTFSSVYKKMTNKDVVFEFPVQE 579
            MFTGA KI KPEGQ ADEFEQ VAQELFNLE SAA++K++++DLYIT AKQVDV  G+KAI+I+VPYRL ++++KIQ RL RELEKKFSGRHVV I  RTILGK +AR+ K  G RPRSRTLT+VQ+++L+D+V+PTEIVGKRTR ++DGSK+LKV LDPKDQVNVETKLDTF++VYKK+TNKDVVFEFPV +
Sbjct:    1 MFTGAAKIKKPEGQTADEFEQQVAQELFNLEASAAELKNELKDLYITAAKQVDVASGRKAIVIFVPYRLHKAFNKIQARLTRELEKKFSGRHVVFITQRTILGKGFARANKATGPRPRSRTLTAVQEAILDDIVYPTEIVGKRTRVRLDGSKLLKVYLDPKDQVNVETKLDTFATVYKKLTNKDVVFEFPVHQ 193
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BLAST of mRNA_H-paniculata_contig1502.2988.1 vs. uniprot
Match: A0A7S2C777_9STRA (40S ribosomal protein S7 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C777_9STRA)

HSP 1 Score: 285 bits (729), Expect = 2.990e-92
Identity = 145/196 (73.98%), Postives = 172/196 (87.76%), Query Frame = 1 
Query:    1 MFTGATKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSDIRDLYITGAKQVDVG---GGKKAIIIYVPYRLLRSYHKIQQRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGIRPRSRTLTSVQDSMLEDLVFPTEIVGKRTRCKIDGSKILKVQLDPKDQVNVETKLDTFSSVYKKMTNKDVVFEFPVQE 579
            MFTG  KIVKPEGQE+ EFE TVAQELFNLEMSAA+IKS++RDLYIT AK+V+VG    GK+AIII+VP++LL+ +HKIQ RLVRELEKKFSG+HV I+A RTILGKSY+RSTKT+G RPRSRTLT+VQD++LEDLVFPTEIVGKRTRCK+DG+K L V LD KD VNVETKL+TF+ VYK +TNK+V F FP ++
Sbjct:    1 MFTGFKKIVKPEGQESTEFENTVAQELFNLEMSAAEIKSELRDLYITAAKEVNVGPASAGKQAIIIFVPFKLLKQFHKIQARLVRELEKKFSGKHVTIVAQRTILGKSYSRSTKTKGPRPRSRTLTAVQDAILEDLVFPTEIVGKRTRCKLDGTKQLNVFLDAKDIVNVETKLETFADVYKHLTNKEVEFAFPTEQ 196
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BLAST of mRNA_H-paniculata_contig1502.2988.1 vs. uniprot
Match: K3XAM7_GLOUD (40S ribosomal protein S7 n=3 Tax=Pythiaceae TaxID=4782 RepID=K3XAM7_GLOUD)

HSP 1 Score: 283 bits (725), Expect = 9.470e-92
Identity = 143/189 (75.66%), Postives = 168/189 (88.89%), Query Frame = 1 
Query:   13 ATKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSDIRDLYITGAKQVDVGGGKKAIIIYVPYRLLRSYHKIQQRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGIRPRSRTLTSVQDSMLEDLVFPTEIVGKRTRCKIDGSKILKVQLDPKDQVNVETKLDTFSSVYKKMTNKDVVFEFPVQE 579
            + KIVKPEGQ ADEFE  VAQEL NL+ SAA+IK+D++DLYIT AKQVDV  G+KAI+I+VPYRL  ++ KIQ RLVRELEKKFSGRHVVIIA RTILGK Y+RS KT G RPRSRTL +VQ+++L+DLV+PTEIVGKRTR ++DGSK+LKV LDPKDQVNVETKLDTF++VYKK+TNKDVVFEFPVQ+
Sbjct:    2 SAKIVKPEGQTADEFELQVAQELANLQQSAAEIKNDLKDLYITAAKQVDVASGRKAIVIFVPYRLHSAFKKIQARLVRELEKKFSGRHVVIIAQRTILGKGYSRSNKTNGPRPRSRTLVAVQEAILDDLVYPTEIVGKRTRVRLDGSKLLKVFLDPKDQVNVETKLDTFATVYKKLTNKDVVFEFPVQQ 190
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1502.2988.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8D1A7H5_PIG1.820e-11994.7640S ribosomal protein S7 n=1 Tax=Sus scrofa TaxID=... [more]
D7G463_ECTSI4.070e-11695.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2XZE0_9STRA4.870e-10180.2140S ribosomal protein S7 n=1 Tax=Fibrocapsa japoni... [more]
A0A836C8B1_9STRA6.450e-10080.6540S ribosomal protein S7 n=1 Tax=Tribonema minus T... [more]
A0A6T5NXM7_HETAK6.840e-9979.2740S ribosomal protein S7 n=1 Tax=Heterosigma akash... [more]
A0A662XBL9_9STRA4.960e-9574.6140S ribosomal protein S7 n=2 Tax=Nothophytophthora... [more]
H3G9W8_PHYRM2.460e-9477.2540S ribosomal protein S7 n=21 Tax=Peronosporaceae ... [more]
A0A2D4C6D5_PYTIN5.670e-9473.5840S ribosomal protein S7 n=1 Tax=Pythium insidiosu... [more]
A0A7S2C777_9STRA2.990e-9273.9840S ribosomal protein S7 n=1 Tax=Dictyocha speculu... [more]
K3XAM7_GLOUD9.470e-9275.6640S ribosomal protein S7 n=3 Tax=Pythiaceae TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1502contigH-paniculata_contig1502:1675..6479 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score364.8
Seed ortholog evalue2.6e-98
Seed eggNOG ortholog2880.D7G463
Preferred nameRPS7
KEGG koko:K02993,ko:K11592
KEGG Pathwayko03010,ko05206,map03010,map05206
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000184,GO:0000956,GO:0001838,GO:0001841,GO:0001843,GO:0002009,GO:0002181,GO:0002376,GO:0002520,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003729,GO:0003730,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0007275,GO:0007399,GO:0008104,GO:0008150,GO:0008152,GO:0008187,GO:0008266,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009966,GO:0009967,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010941,GO:0010942,GO:0014020,GO:0015031,GO:0015833,GO:0015935,GO:0016070,GO:0016071,GO:0016072,GO:0016331,GO:0019222,GO:0019439,GO:0019538,GO:0019899,GO:0019900,GO:0019901,GO:0021915,GO:0022613,GO:0022626,GO:0022627,GO:0023051,GO:0023056,GO:0030097,GO:0030154,GO:0030162,GO:0030234,GO:0030684,GO:0030686,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031647,GO:0031974,GO:0031981,GO:0032040,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034470,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0035148,GO:0035239,GO:0035295,GO:0042176,GO:0042177,GO:0042254,GO:0042274,GO:0042886,GO:0042981,GO:0043009,GO:0043043,GO:0043065,GO:0043067,GO:0043068,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0045861,GO:0046483,GO:0046700,GO:0046907,GO:0048027,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048583,GO:0048584,GO:0048598,GO:0048646,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051246,GO:0051248,GO:0051338,GO:0051348,GO:0051438,GO:0051444,GO:0051641,GO:0051649,GO:0051726,GO:0055105,GO:0055106,GO:0060255,GO:0060429,GO:0060562,GO:0060606,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072175,GO:0072594,GO:0072599,GO:0072657,GO:0080090,GO:0090150,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901796,GO:1901798,GO:1902253,GO:1902255,GO:1902531,GO:1902533,GO:1903050,GO:1903051,GO:1903320,GO:1903321,GO:1903362,GO:1903363,GO:1904666,GO:1904667,GO:1990904,GO:1990948,GO:2000058,GO:2000059,GO:2001233,GO:2001235,GO:2001242,GO:2001244
EggNOG free text desc.structural constituent of ribosome
EggNOG OGsKOG3320@1,KOG3320@2759
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-02_001435.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko03011,ko03036
Exons6
Model size1239
Cds size585
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929204.699423-UTR-H-paniculata_contig1502:1674..23281622929204.699423-UTR-H-paniculata_contig1502:1674..2328Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1502 1675..2328 -
1691480769.1423712-UTR-H-paniculata_contig1502:1674..23281691480769.1423712-UTR-H-paniculata_contig1502:1674..2328Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1502 1675..2328 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929204.714432-CDS-H-paniculata_contig1502:2328..24241622929204.714432-CDS-H-paniculata_contig1502:2328..2424Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1502 2329..2424 -
1691480769.1528902-CDS-H-paniculata_contig1502:2328..24241691480769.1528902-CDS-H-paniculata_contig1502:2328..2424Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1502 2329..2424 -
1622929204.7272913-CDS-H-paniculata_contig1502:2641..27371622929204.7272913-CDS-H-paniculata_contig1502:2641..2737Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1502 2642..2737 -
1691480769.160921-CDS-H-paniculata_contig1502:2641..27371691480769.160921-CDS-H-paniculata_contig1502:2641..2737Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1502 2642..2737 -
1622929204.7433233-CDS-H-paniculata_contig1502:3334..34611622929204.7433233-CDS-H-paniculata_contig1502:3334..3461Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1502 3335..3461 -
1691480769.1727533-CDS-H-paniculata_contig1502:3334..34611691480769.1727533-CDS-H-paniculata_contig1502:3334..3461Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1502 3335..3461 -
1622929204.760826-CDS-H-paniculata_contig1502:3841..39541622929204.760826-CDS-H-paniculata_contig1502:3841..3954Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1502 3842..3954 -
1691480769.1824102-CDS-H-paniculata_contig1502:3841..39541691480769.1824102-CDS-H-paniculata_contig1502:3841..3954Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1502 3842..3954 -
1622929204.771618-CDS-H-paniculata_contig1502:4333..43931622929204.771618-CDS-H-paniculata_contig1502:4333..4393Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1502 4334..4393 -
1691480769.190699-CDS-H-paniculata_contig1502:4333..43931691480769.190699-CDS-H-paniculata_contig1502:4333..4393Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1502 4334..4393 -
1622929204.7834537-CDS-H-paniculata_contig1502:6386..64791622929204.7834537-CDS-H-paniculata_contig1502:6386..6479Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1502 6387..6479 -
1691480769.209853-CDS-H-paniculata_contig1502:6386..64791691480769.209853-CDS-H-paniculata_contig1502:6386..6479Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1502 6387..6479 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1502.2988.1prot_H-paniculata_contig1502.2988.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1502 2329..6479 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1502.2988.1

>prot_H-paniculata_contig1502.2988.1 ID=prot_H-paniculata_contig1502.2988.1|Name=mRNA_H-paniculata_contig1502.2988.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=195bp
MFTGATKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSDIRDLYITGAK
QVDVGGGKKAIIIYVPYRLLRSYHKIQQRLVRELEKKFSGRHVVIIATRT
ILGKSYARSTKTQGIRPRSRTLTSVQDSMLEDLVFPTEIVGKRTRCKIDG
SKILKVQLDPKDQVNVETKLDTFSSVYKKMTNKDVVFEFPVQEP*
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mRNA from alignment at H-paniculata_contig1502:1675..6479-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1502.2988.1 ID=mRNA_H-paniculata_contig1502.2988.1|Name=mRNA_H-paniculata_contig1502.2988.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4805bp|location=Sequence derived from alignment at H-paniculata_contig1502:1675..6479- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTCACGGGAGCCACGAAGATCGTGAAGCCCGAGGGCCAGGAGGCAGA
TGAATTTGAGCAGACTGTAGCCCAGGAGCTCTTCAACCTCGAGGTGAGAA
GGGACTGTTGACTGTATTTACTGTTGTAAACTCCGACGCTAGGCACACTA
GCCTCCGGGATTACCTGTGAGCAGCAGAGCAGCATTATTTCTACCCTCTA
AACCCCAAGTCTGTCTCTAGTCTGGCCCGCAATAGTGTTACGTCGTCAAC
AATTTCGCCCCTCCTCTCCAGTGCCCTGCGGCCACAGGAAGCAAGTGTGG
ATATTGGTTTGAAATGCAGCCATGGTATTGGTAACATCATCTGGTATGTC
AAACTGTAGTATTGTGTATGGGATACTACCCTCGTACTGGATACCAAGAA
GAACTCGTTACTGCGCAACGAAGATGTCGGTATGCATTGTGCGATCGCCG
AAGATTGGTATTACCATCCCCGGTACTTCCCGGTGAAGGTCGGACGGTGA
TTCTTAGGGAATGGCTTTTCAATAGTTGACAGTCGCCAGCCAAGTAACGT
AAGCATGGTGAACTACGTGACTGGTCCAGTGCAGAGTGGGTTTGGTCCTC
ACCCGTCAAGTAGGTTTTCCGTTGTCTCCTGTAACGGATGGTTGAAGGAT
AAAACACCCCATTGGTCGAGATTTAGGCGTATAAAATATATCTTTCGGCG
TCCGTTTTTGCTCCACACTGGTCGTCTTTTGACTCCTTTTTTTATTAATG
TATTGTATCGGAAGATGGACATTCGAACGCTCCACAATTGCCCGACATAG
GCGATGGGCGACCAAGGTTAGACCTACGTGCAACCGAGGAATAAGTCAGC
TCGACACCTTCTATTCTATTTCGGACGGACACCGTAATATCAGTACAATA
TGCAGCATGATGATATGAAAGCCTTGTCTGCGCCAACTCTATCTCCGAGT
TTGTCATGTGGCCATCTCGTTTCCCGCAAACGTTATCGGCAACACGTTAA
CCTGAAATTATTCGGGATATACATAGCTTGAAAAAAGAAACGTCTGTTTT
ATGCTGGAAGCCAGTGAAGGGCGGAACCAACTGTGGCTCATCGAATTTTT
AAAATATCCACAATATGAAACCGTCGAAGGAAAGAAAGTAGATACTAGCT
GTTACGGATTTTGAAGCCGATGGCGCGCGAACACAGGTAGGTCATCGACT
TACTCCATTTGTAACTTTCGGAATATATTTGAAAATCATTTGAAGTTTAT
CGAAGGTGAATATTTAGGCTCAAACGTGGACACCGATACAGGTAATCCCG
AAGAGTCTAAGAAATCTGACGAAACTTTTTTGGAAGACAGGTAAACTATC
GCCAATCAGTACATGATTGTAATGTAATTTGGCACAGGTGGGGTAAGGAA
AATGTAAACGAAGCAGTAGAGTTCAACCAAACGTGACCCTAGAGGGTCGG
TCAGCCCTAAACCTGTTGAAGTTCGAGCACTCAAAAAAATCTTTGCACAT
TTCGTGTATCATGCTGTCCATCGACCCTGACCATTCGGGAAAAAACGTTG
ACGCTAGTGCAACATACTGTCCAAAAGGTGATGGCAAGAGTTGGGTCCAT
CGCCACTATTCTACACTACTGTACGTCCAATGACGAAGTTATTCGTGGAC
GACTCAAGCTGGACGCTCTTGATACAAGTCTGATGCGGTCCAAGTCAAGG
CGTCGTTGTCTCCCTGGAAACGAACATGGTCACCGTATCGATTGTAGTGA
TCCGTGCGCCAGCTGACGATGTTGAATGTAATTAGTCCAGGTCGTGAGAG
CAATAATTTGATCACCCTTCCGTTGAAGGAAATATGGAGGTGGTCCGTGA
GGGGCGAGGACAGCTCTTTTTTTTAACAAGAGAGGGAATACGCTGAAACG
AGTTTCTGGAGTCAGAGCCTGTTCGTCTACTGCAGGAGGATGAAATGAAC
AAATATGCCGCACTCGCTGAAGTCCCGCGTGTGCGGTGGAAAACTATACG
GTTGGAGCTTGTACTGGCACTTCATTATACTATCGCTGAGTATGCCTCTT
TGATCCCGTCTCTCCTGTGCTTTACAAATCATACAGATGTCCGCGGCGGA
CATCAAGTCGGACATCCGTGACCTGTACATCACCGGCGCAAAACAGGTTA
GTTATCCCTGATGTGCCACATCGTCATTATTTTTTGTTTCCCATGATCAT
TTGGAGTTCGTAACCAGCAGAGTGAATATCTTCTCTTGAACCTGATGCTG
ATCTCGGATATCCACTCGCACTGTTGCCGTTGGGATATTTCAGTGAGACG
ACAGATGACCCCGTCTGTTTCCATTAGGTTCAAGACTTCGATGGGAACAT
GAATCAAGCATGGGCTATTTACCCTAGTTTTCGTAATTTCAGGCACCATT
TGTCCAAGTCCCCTAATCAAATAAATCTTTGCCGCGATTGAGTTTACCTA
GGATGTGCAGTACATCTGTCCGGTCATATATGCTGAATATGCATGGATTG
ACGGTGTTGAATGATCCAAACACAGGTGGACGTGGGTGGTGGGAAGAAGG
CCATAATCATTTACGTGCCGTACCGTCTTTTGAGGTCTTACCACAAGATC
CAGCAGCGCTTGGTGCGAGAACTGGAGAAGAAGTTCAGGTGAATACTGGG
GTCATGACCCATTCCGGAACATGTGTGAACCCTGAAAAAATTCCTGTGGT
GTACTGCTAGCAGATGCGAGCGGACCTGCTCAATTAGTTGAACCTATCCT
AAGTCAGCTACGGTGTCGAAAGTTATACGTTCGAGGAAGAACCCTTGAAA
CAATGAGATACGGATTCACACGAGAGAATGTCTCGCCTAACCGGTGGCAA
GGGTGGGATATAAAAGCGTTAAGTCTCACATGAACATATGACCATGATGA
AATGGAGCTTTTGAAATTAAGTGTACCAGGGCGGTTGCACACACTGTATA
TTCATGAGATAATGTTGGTATGACAATTGATACCAGCTCGTTTTCCAACT
TATAAACTAAAACTTCAGCGGCCGGCACGTGGTCATCATAGCCACTCGGA
CGATCCTTGGCAAGAGTTACGCCCGCTCCACCAAGACCCAGGGAATCCGG
CCTCGTTCGCGCACCCTCACCTCCGTCCAGGACTCTATGCTTGAGGTCAG
TCCTGAATTTCTGCTCATGGACGAGCGAAGACGGCGAGAGTGCTGCCTGC
GTGGATTATTGGGGAAACTGGATGATGAAACATGAACCACCATTAGATTG
AGAACATGACGTTATTGGTGATTATCTGAATGTCCGTGATAAATGGAGGT
GATCATATTTGCACGTGTGTTCGTCTGTTCATCGATAGTATATTCGACGC
TGTCGTTCGTGATATGATAGATGTGCATGTCTTTTTCACTGATCAGTTAG
GCCCTATACATGACCTTGAGCTCCAGATCTGCGATTACATCTGTCCAATA
CCGATACGTTTATTTATCTGTAGTGATAACACTGAGGGCGCAACGTAAGG
AGACACCAAAGATTGTTTAGTGGAATTACACCCAGCATGTTTGTACAGTG
GGTATCGCCACGGAAACGTGTTCCTTCAAATTTTGACCTCCTGTGGAGGC
CAAGGCATCTATCGTCGAATCAAGACTAATGCATGAGCTGTGAGTATTTC
CGGACTAAAATGCGCTTGTAAATATTGAAGTGTCGATTAATATCAGCAAC
TGGACCATACCAGCCCTACCTATCTCATATACTGCTTCACAGGACCTGGT
ATTCCCAACCGAGATCGTCGGCAAGCGCACACGGTGCAAGATCGATGGTT
CCAAGATCCTTAAAGTACAATTGGACCCGAAGGATCAGGTGGGTTGAGGG
TGAATACAAGGTAGTGAGTGCCAACACAGACGCTCGATGTACTTACTGTG
TAGGTCAAAATGGAAATTTGATTTTTTTCTTGACCTGGACCAGTGCGATT
GTGTAGACCATTCTGGTACGCTGCAGTGTACACACTATTCAATTTAAACT
TGAAGAGGTCAAGCACCACCCTTTGTGTTTTTTGCCCCCTAACTTATTTT
TCCAGGTGAATGTGGAGACCAAGCTGGACACGTTTTCATCGGTGTACAAG
AAGATGACAAACAAGGACGTAGTCTTCGAGTTCCCCGTGCAGGAGCCATA
AGCACAATTCTCCGGTCGACAAGTTGCTAATAATCAGCCAGTTCTAAGCT
ACTAAGCTAAGCTTTCATCGATTTCAGTTGTACATGCATCTTGCATCCGT
TTTTCACGACTGTGGCACGGCAAACTGATTGTGATGAATATTGGATGCTG
TCATGAGCGTTATGGACATTGAAGCGGTATCATGACCGAAGTGCAGTTCG
GCAGATCCATCAGTTATCGGTTGTTGATTGTCACATATTTCATGCGAAAA
ACCTGACCTCATAACCCACGAGAGGGGTATGGGACACGGTCGAGATATTT
CATGACTCACGTCCATCGCATTGATTGAAATTTTTATAAGCATGAATAAA
TGCGTAGTAAAGCTACGTGAGGAAGGTCTTGTACGATTGCAGGAGAAAGA
TGTAAGATAATGTCTATCTCGGCTTTTTTAAACCATGAACAATACAGTAT
CAAACGAATAGAAGCGAAAAACACACATTGCACAGCTGACCAATGGAATC
GAATAAAGCGGAAGAGTGTACGAATAAGGAAAATCAATTACATGAGTCAT
GCGCCGTATTACAGAAAAATGACGTCTATACAAAGATCGTTTTAACCCCT
GTTGCATGTAGTAAAGACATTTGAAGATGTACTCATGACACCGATACGAA
CTAAT
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Coding sequence (CDS) from alignment at H-paniculata_contig1502:1675..6479-

>mRNA_H-paniculata_contig1502.2988.1 ID=mRNA_H-paniculata_contig1502.2988.1|Name=mRNA_H-paniculata_contig1502.2988.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1170bp|location=Sequence derived from alignment at H-paniculata_contig1502:1675..6479- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTCACGGGAGCCACGAAGATCGTGAAGCCCGAGGGCCAGGAGGCAGA
TGAATTTGAGCAGACTGTAGCCCAGGAGCTCTTCAACCTCGAGATGTTCA
CGGGAGCCACGAAGATCGTGAAGCCCGAGGGCCAGGAGGCAGATGAATTT
GAGCAGACTGTAGCCCAGGAGCTCTTCAACCTCGAGATGTCCGCGGCGGA
CATCAAGTCGGACATCCGTGACCTGTACATCACCGGCGCAAAACAGATGT
CCGCGGCGGACATCAAGTCGGACATCCGTGACCTGTACATCACCGGCGCA
AAACAGGTGGACGTGGGTGGTGGGAAGAAGGCCATAATCATTTACGTGCC
GTACCGTCTTTTGAGGTCTTACCACAAGATCCAGCAGCGCTTGGTGCGAG
AACTGGAGAAGAAGTTCAGGTGGACGTGGGTGGTGGGAAGAAGGCCATAA
TCATTTACGTGCCGTACCGTCTTTTGAGGTCTTACCACAAGATCCAGCAG
CGCTTGGTGCGAGAACTGGAGAAGAAGTTCAGCGGCCGGCACGTGGTCAT
CATAGCCACTCGGACGATCCTTGGCAAGAGTTACGCCCGCTCCACCAAGA
CCCAGGGAATCCGGCCTCGTTCGCGCACCCTCACCTCCGTCCAGGACTCT
ATGCTTGAGCGGCCGGCACGTGGTCATCATAGCCACTCGGACGATCCTTG
GCAAGAGTTACGCCCGCTCCACCAAGACCCAGGGAATCCGGCCTCGTTCG
CGCACCCTCACCTCCGTCCAGGACTCTATGCTTGAGGACCTGGTATTCCC
AACCGAGATCGTCGGCAAGCGCACACGGTGCAAGATCGATGGTTCCAAGA
TCCTTAAAGTACAATTGGACCCGAAGGATCAGGACCTGGTATTCCCAACC
GAGATCGTCGGCAAGCGCACACGGTGCAAGATCGATGGTTCCAAGATCCT
TAAAGTACAATTGGACCCGAAGGATCAGGTGAATGTGGAGACCAAGCTGG
ACACGTTTTCATCGGTGTACAAGAAGATGACAAACAAGGACGTAGTCTTC
GAGTTCCCCGTGCAGGAGCCATAAGTGAATGTGGAGACCAAGCTGGACAC
GTTTTCATCGGTGTACAAGAAGATGACAAACAAGGACGTAGTCTTCGAGT
TCCCCGTGCAGGAGCCATAA
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