mRNA_H-paniculata_contig15012.2985.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig15012.2985.1
Unique NamemRNA_H-paniculata_contig15012.2985.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig15012.2985.1 vs. uniprot
Match: D7FT45_ECTSI (Spermidine/spermine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT45_ECTSI)

HSP 1 Score: 453 bits (1166), Expect = 2.520e-155
Identity = 217/273 (79.49%), Postives = 242/273 (88.64%), Query Frame = 1 
Query:    1 KVVQTAPFGKTLVLDGKTQSAELDEFIYHEALVHPAMLAHPDPKTVYIGGGGELATAREVLRHKSLEKCVMVDLDKLVVDTSKEMLPEWGAGVTDDPRLELHYTDAHAFLKEDERTYDVIIMDIADPIEAGPGYVLYTQEFYQYATTKLSPGGILVTQSGAASVHLKHECFTVIHKTLKSVFENVAYMVADIPSFGCNWGFNLASDGDELLLADIRRKDPAITDEQIASRIEGELRFYDGTAHLGLFGSPKWLRAAIESEKRIMTVDEPVFMY 819
            +VV+TAPFGKTLVLDGKTQSA+LDEFIYHE LVHPAMLAHP+PK VYIGGGGELATAREVLRHKS+EKCVMVDLDKLVVDTS+++LPEWGAGV DDPRLELHYTDAHAFL+E E  YDVIIMDIADPIEAGPGY+LYTQEFY++ATT+LSPGG+LVTQSGAA+VHLK ECFTVIHKTLKSVF++V+  VAD+PSFGC WGFNLASD       + RRK+ A TD  I +RI G LRFYDG  H GLFG PKWLRAA+E E+RIMT+D PVFMY
Sbjct:   12 QVVETAPFGKTLVLDGKTQSAQLDEFIYHETLVHPAMLAHPNPKRVYIGGGGELATAREVLRHKSVEKCVMVDLDKLVVDTSRDVLPEWGAGVLDDPRLELHYTDAHAFLRESEDMYDVIIMDIADPIEAGPGYILYTQEFYKFATTRLSPGGVLVTQSGAAAVHLKDECFTVIHKTLKSVFQHVSMSVADVPSFGCCWGFNLASDSSTFNTEEYRRKEVAATDSDIEARITGTLRFYDGVTHGGLFGVPKWLRAAVEEEERIMTIDSPVFMY 284
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BLAST of mRNA_H-paniculata_contig15012.2985.1 vs. uniprot
Match: A0A3R7KTL5_9STRA (PABS domain-containing protein n=18 Tax=Peronosporaceae TaxID=4777 RepID=A0A3R7KTL5_9STRA)

HSP 1 Score: 355 bits (910), Expect = 4.170e-115
Identity = 170/276 (61.59%), Postives = 219/276 (79.35%), Query Frame = 1 
Query:    1 KVVQTAPFGKTLVLDGKTQSAELDEFIYHEALVHPAMLAHPDPKTVYIGGGGELATAREVLRHKSLEKCVMVDLDKLVVDTSKEMLPEWGAGVTDDPRLELHYTDAHAFLKEDERTYDVIIMDIADPIEAGPGYVLYTQEFYQYATTKLSPGGILVTQSGAASVHLKHECFTVIHKTLKSVFENVAYMVADIPSFGCNWGFNLASDGD---ELLLADIRRKDPAITDEQIASRIEGELRFYDGTAHLGLFGSPKWLRAAIESEKRIMTVDEPVFMY 819
            ++++T  FGKTLVLDGKTQSA+ DE IYHE LVHP+MLAHP+PKTVYIGGGGE ATAREVL+HKS+EK VMVD+D+LV +  ++ +PEW  G  +DPRLE+HYTDAHAFLK+ + T+DVIIMDIADPIEAGPGYVLYT+EFY+YA TKL+ GG +VTQSG  +V+  +ECF+ I+ TLK+ F  V     DIPSFGC W FN+A++ D   ++ + DIR +  AIT+E + +R+   L+F DG +H+GLFG PK +R A+E+E R++TVD PVFMY
Sbjct:  111 QIIETHSFGKTLVLDGKTQSAKNDESIYHETLVHPSMLAHPNPKTVYIGGGGEFATAREVLKHKSVEKVVMVDIDELVCNMCRKEMPEWADGAFEDPRLEVHYTDAHAFLKQYDGTFDVIIMDIADPIEAGPGYVLYTEEFYKYAQTKLNKGGFMVTQSGPGAVYNWNECFSAIYSTLKTSFNTVVPYSVDIPSFGCVWAFNMATNVDHDGDVAVTDIRERRIAITNELVETRLSKPLKFLDGVSHMGLFGLPKVVREALENETRVITVDNPVFMY 386
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BLAST of mRNA_H-paniculata_contig15012.2985.1 vs. uniprot
Match: A0A484DTM6_BRELC (PABS domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTM6_BRELC)

HSP 1 Score: 352 bits (904), Expect = 4.640e-115
Identity = 172/277 (62.09%), Postives = 215/277 (77.62%), Query Frame = 1 
Query:    1 KVVQTAPFGKTLVLDGKTQSAELDEFIYHEALVHPAMLAHPDPKTVYIGGGGELATAREVLRHKSLEKCVMVDLDKLVVDTSKEMLPEWGAGVTDDPRLELHYTDAHAFLKEDERTYDVIIMDIADPIEAGPGYVLYTQEFYQYATTKLSPGGILVTQSGAASVHLKHECFTVIHKTLKSVFENVAYMVADIPSFGCNWGFNLASDGDE----LLLADIRRKDPAITDEQIASRIEGELRFYDGTAHLGLFGSPKWLRAAIESEKRIMTVDEPVFMY 819
            ++++T  FGK LVLDGKTQSA  DE IYHEALVHPA+L HP+PKTVYIGGGGE ATAREVL+HKS+EK VMVD+D+LV +  ++ +PEW AG  +DPRLE+HYTDAHAFLK+ E T+DVIIMDIADPIEAGPGYVLYT+EFY+YA+TKL+ GG +VTQSG  +V+   ECF+ I+ TLK+ F  V     DIPSFGC WGFN+A++ D      +L  IR +  A TD  + SRI   L++ DG +H+GLFG PK +R A+ESE R++TVD PVF+Y
Sbjct:   51 QIIETNSFGKMLVLDGKTQSARSDEAIYHEALVHPALLNHPNPKTVYIGGGGEFATAREVLKHKSVEKVVMVDIDELVCNMCRKEMPEWSAGAFEDPRLEVHYTDAHAFLKQYEGTFDVIIMDIADPIEAGPGYVLYTEEFYKYASTKLNKGGYMVTQSGPGAVNNWDECFSSIYCTLKTSFNTVVPYTVDIPSFGCVWGFNMATNVDNEDGAAVLTSIRERSIAATDALVKSRIRQRLQYLDGVSHMGLFGLPKIVREALESETRVITVDNPVFLY 327
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BLAST of mRNA_H-paniculata_contig15012.2985.1 vs. uniprot
Match: A0A836C836_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C836_9STRA)

HSP 1 Score: 353 bits (906), Expect = 6.810e-115
Identity = 176/282 (62.41%), Postives = 216/282 (76.60%), Query Frame = 1 
Query:    1 KVVQTAPFGKTLVLDGKTQSAELDEFIYHEALVHPAMLAHPDPKTVYIGGGGELATAREVLRHKSLEKCVMVDLDKLVVDTSKEMLPEWGAGVTDDPRLELHYTDAHAFLKEDERT-YDVIIMDIADPIEAGPGYVLYTQEFYQYATTKLSPGGILVTQSGAASVHLKHECFTVIHKTLKSVFENVAYMVADIPSFGCNWGFNLASDG--DELLLADIRRKDPAITDEQIASRIEG-------ELRFYDGTAHLGLFGSPKWLRAAIESEKRIMTVDEPVFM 816
            +V+  APFGKTLVLDGK+QSA  DEF+YHEALVHPAML H +PK V+IGGGGE ATARE+LRH+S+EKC+MVDLDK+VVD SK+ LPEWGAG  DD RLE++Y DAHA+L++ +   +DVI MDIADPIEAGPGYVLYT+EFY+YATT+L+ GGI+VTQSG  S++   ECFTVIH+TL S F++      D+PSFGC W F LA +        A +     A TD  IA+RI G        LRFYDG AHLG+FG+PKWLR A+++E+R+MTVD PVFM
Sbjct:   77 QVIDCAPFGKTLVLDGKSQSAAGDEFVYHEALVHPAMLLHGNPKRVFIGGGGEGATAREMLRHRSVEKCIMVDLDKMVVDVSKDKLPEWGAGCWDDDRLEVYYQDAHAWLRDYKGPPFDVICMDIADPIEAGPGYVLYTEEFYRYATTQLAEGGIIVTQSGPGSLNTHEECFTVIHRTLASAFKHAVPYTVDVPSFGCTWAFTLAFNACAGAADAAAVVEMSVAATDAAIAARIGGGGSSGSSALRFYDGAAHLGMFGTPKWLRRALDAERRVMTVDNPVFM 358
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BLAST of mRNA_H-paniculata_contig15012.2985.1 vs. uniprot
Match: A0A6A4DP37_9STRA (PABS domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A4DP37_9STRA)

HSP 1 Score: 351 bits (901), Expect = 1.560e-114
Identity = 174/277 (62.82%), Postives = 216/277 (77.98%), Query Frame = 1 
Query:    1 KVVQTAPFGKTLVLDGKTQSAELDEFIYHEALVHPAMLAHPDPKTVYIGGGGELATAREVLRHKSLEKCVMVDLDKLVVDTSKEMLPEWGAGVTDDPRLELHYTDAHAFLKEDERTYDVIIMDIADPIEAGPGYVLYTQEFYQYATTKLSPGGILVTQSGAASVHLKHECFTVIHKTLKSVFENVAYMVADIPSFGCNWGFNLAS---DGDELL-LADIRRKDPAITDEQIASRIEGELRFYDGTAHLGLFGSPKWLRAAIESEKRIMTVDEPVFMY 819
            ++++T  FGKTLVLDGKTQSA+ DE IYHE LVHPA+LAHP+PKTVYIGGGGE ATAREVL+HKS+EK VMVD+D+LV +  ++ LPEW  G  +DPRLE+HYTDAHAFLK+ + T+DVIIMDIADPIEAGPGYVLYT+EFY+YA TKL+ GG +VTQSG  +V+   ECF+ IH TLK+ F  VA    DIPSFGC W FN+A+   DGD +  +  IR +  A T+  I SRI   L+F DG +H+GLFG PK +R ++E+E R++TVD PVFMY
Sbjct:   56 QIIETHSFGKTLVLDGKTQSAKNDEAIYHETLVHPALLAHPNPKTVYIGGGGEFATAREVLKHKSVEKVVMVDIDELVCNMCRKELPEWNDGAFEDPRLEVHYTDAHAFLKQYDGTFDVIIMDIADPIEAGPGYVLYTEEFYKYALTKLNKGGFMVTQSGPGAVYNWDECFSSIHCTLKTNFNTVAPYTVDIPSFGCIWAFNMATNVEDGDGVAAVTAIRERSIATTNSLIESRISKPLKFLDGVSHMGLFGLPKIVRESLENETRVITVDNPVFMY 332
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BLAST of mRNA_H-paniculata_contig15012.2985.1 vs. uniprot
Match: F0WPF1_9STRA (Spermine synthase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WPF1_9STRA)

HSP 1 Score: 351 bits (900), Expect = 1.620e-114
Identity = 169/276 (61.23%), Postives = 210/276 (76.09%), Query Frame = 1 
Query:    1 KVVQTAPFGKTLVLDGKTQSAELDEFIYHEALVHPAMLAHPDPKTVYIGGGGELATAREVLRHKSLEKCVMVDLDKLVVDTSKEMLPEWGAGVTDDPRLELHYTDAHAFLKEDERTYDVIIMDIADPIEAGPGYVLYTQEFYQYATTKLSPGGILVTQSGAASVHLKHECFTVIHKTLKSVFENVAYMVADIPSFGCNWGFNLASDGDEL---LLADIRRKDPAITDEQIASRIEGELRFYDGTAHLGLFGSPKWLRAAIESEKRIMTVDEPVFMY 819
            ++++T  FGKTLVLDGKTQSA+ DE IYHE LVHPA+L HP+PKTVYIGGGGE ATAREVL+HKS+EK VMVD+D+LV D  ++ LPEW  G  +DPR E++Y DAHAFLK+ + T+DVIIMDIADPIEAGPGYVLYTQEFYQYA TKL+  G+LVTQSG  +++  +ECF  IH T+K+ F  V     DIPSFGC W FNLA + DE     +  IR +    T+  IA R+   L+FYDG +HLG+FG PK +R A+E+E R++T+D PVFMY
Sbjct:   48 QIIETHSFGKTLVLDGKTQSAQSDEMIYHETLVHPALLCHPNPKTVYIGGGGEFATAREVLKHKSVEKVVMVDIDELVCDMCRKELPEWNDGAYEDPRTEVYYADAHAFLKQYDGTFDVIIMDIADPIEAGPGYVLYTQEFYQYAQTKLNKNGVLVTQSGPGAMYNWNECFASIHATMKNSFNTVVPFTVDIPSFGCMWAFNLALNDDECGEKAVTSIRERCAKDTNTLIADRLSKPLKFYDGVSHLGIFGLPKPIREAVENETRVITIDNPVFMY 323
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BLAST of mRNA_H-paniculata_contig15012.2985.1 vs. uniprot
Match: A0A7S2V6Z8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6Z8_9STRA)

HSP 1 Score: 350 bits (898), Expect = 2.020e-114
Identity = 173/274 (63.14%), Postives = 208/274 (75.91%), Query Frame = 1 
Query:    1 KVVQTAPFGKTLVLDGKTQSAELDEFIYHEALVHPAMLAHPDPKTVYIGGGGELATAREVLRHKSLEKCVMVDLDKLVVDTSKEMLPEWGAGVTDDPRLELHYTDAHAFLKEDERTYDVIIMDIADPIEAGPGYVLYTQEFYQYATTKLSPGGILVTQSGAASVHLKHECFTVIHKTLKSVFENVAYMVADIPSFGCNWGFNLAS-DGDELLLADIRRKDPAITDEQIASRIEGELRFYDGTAHLGLFGSPKWLRAAIESEKRIMTVDEPVFMY 819
            ++++T  FG TLVLDGKTQSA  DEFIYHE LVHPAML HP+PK VYIGGGGELATARE LRHKS+E+ VM DLDK+VVD S E LPEW AG   DPRLEL Y DAHA+L  ++  +DVIIMDIADPIEAGPGY+LYT+EFY+YA T+L+PGG+LVTQSG  S     ECFT IH TLK  F  V      IPSFGC+W FN+AS D      A    K     DE+I+ RI+GEL+FYDG +H+G+FG+PK++RAA+ ++KR++T D PVFMY
Sbjct:   36 QIIETNEFGTTLVLDGKTQSALRDEFIYHECLVHPAMLLHPNPKKVYIGGGGELATAREALRHKSVERVVMCDLDKMVVDVSMEHLPEWNAGCHLDPRLELAYGDAHAWLLNNDEQFDVIIMDIADPIEAGPGYILYTEEFYKYAMTRLTPGGVLVTQSGPGSNTTHGECFTAIHNTLKQAFPTVIPYTVSIPSFGCDWAFNVASIDSGVDTQAYGVGKPMGDLDEEISKRIDGELKFYDGVSHVGIFGTPKYIRAALAADKRVITKDNPVFMY 309
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BLAST of mRNA_H-paniculata_contig15012.2985.1 vs. uniprot
Match: M4BQE8_HYAAE (PABS domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BQE8_HYAAE)

HSP 1 Score: 350 bits (899), Expect = 3.010e-114
Identity = 172/278 (61.87%), Postives = 214/278 (76.98%), Query Frame = 1 
Query:    1 KVVQTAPFGKTLVLDGKTQSAELDEFIYHEALVHPAMLAHPDPKTVYIGGGGELATAREVLRHKSLEKCVMVDLDKLVVDTSKEMLPEWGAGVTDDPRLELHYTDAHAFLKEDERTYDVIIMDIADPIEAGPGYVLYTQEFYQYATTKLSPGGILVTQSGAASVHLKHECFTVIHKTLKSVFENVAYMVADIPSFGCNWGFNLASDGDE-----LLLADIRRKDPAITDEQIASRIEGELRFYDGTAHLGLFGSPKWLRAAIESEKRIMTVDEPVFMY 819
            ++++T  FGKTLVLDGKTQS + DE IYHE LVHPA+LAHP+PKTVYIGGGGE ATAREVL+HKS+EK VMVD+D+LV +  ++ +PEW  G  +DPRLE+HYTDAHAFLK+ + T+DVIIMDIADPIEAGPGYVLYT+EFYQYA TKL+ GG +VTQSG  +V+  HECF+ I++TLK+ F  V     DIPSFGC W FN+A++ D+       +A IR +    TDE I +RI   L   DG +HLGLFG PK +R A+++E RI+TVD PVFMY
Sbjct:   54 QIIETHSFGKTLVLDGKTQSTKSDEAIYHETLVHPALLAHPNPKTVYIGGGGEFATAREVLKHKSVEKVVMVDIDELVCNMCRKEMPEWADGAFEDPRLEVHYTDAHAFLKQYDGTFDVIIMDIADPIEAGPGYVLYTEEFYQYAVTKLNRGGFMVTQSGPGAVYNWHECFSSIYRTLKTNFNTVMPYTVDIPSFGCPWAFNMATNLDDGGDSKAAVASIRERSIVTTDELIETRIGKPLVSLDGVSHLGLFGLPKTVREALQNETRIITVDNPVFMY 331
[Close]
BLAST of mRNA_H-paniculata_contig15012.2985.1 vs. uniprot
Match: A0A024G9Q2_9STRA (PABS domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G9Q2_9STRA)

HSP 1 Score: 350 bits (898), Expect = 3.250e-114
Identity = 169/275 (61.45%), Postives = 208/275 (75.64%), Query Frame = 1 
Query:    1 KVVQTAPFGKTLVLDGKTQSAELDEFIYHEALVHPAMLAHPDPKTVYIGGGGELATAREVLRHKSLEKCVMVDLDKLVVDTSKEMLPEWGAGVTDDPRLELHYTDAHAFLKEDERTYDVIIMDIADPIEAGPGYVLYTQEFYQYATTKLSPGGILVTQSGAASVHLKHECFTVIHKTLKSVFENVAYMVADIPSFGCNWGFNLA---SDGDELLLADIRRKDPAITDEQIASRIEGELRFYDGTAHLGLFGSPKWLRAAIESEKRIMTVDEPVFM 816
            ++++T  FGKTLVLDGKTQSA+LDE +YHE LVHPA+L HP+PKTV+IGGGGE ATAREVL+H S+EK VMVD+D+LV +  ++ +PEW  G  +DPR E+HY DAHAFLK+ + T+DVIIMDIADPIEAGPGYVLYTQEFYQYA TKL+  G+LVTQSG  +++  HECF  IH TLK+ F  V     DIPSFGC W FNLA    DG E  ++ IR +    TD  IA R+   L+FYDG +H G+FG PK +R A+E E R++TVD PVFM
Sbjct:   48 QIIETRSFGKTLVLDGKTQSAQLDEMVYHETLVHPALLCHPNPKTVFIGGGGEFATAREVLKHNSVEKVVMVDIDELVCNLCRKEMPEWNDGAYEDPRTEVHYADAHAFLKQYDGTFDVIIMDIADPIEAGPGYVLYTQEFYQYAQTKLNKNGVLVTQSGPGALYNWHECFASIHATLKTAFSTVLPFTVDIPSFGCVWAFNLALNDQDGGEDAVSLIRERCAKDTDVLIADRLSKPLKFYDGVSHKGIFGVPKAIREAVEKETRVITVDNPVFM 322
[Close]
BLAST of mRNA_H-paniculata_contig15012.2985.1 vs. uniprot
Match: A0A2D4BNJ7_PYTIN (Spermidine synthase n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BNJ7_PYTIN)

HSP 1 Score: 350 bits (898), Expect = 4.120e-114
Identity = 167/275 (60.73%), Postives = 212/275 (77.09%), Query Frame = 1 
Query:    1 KVVQTAPFGKTLVLDGKTQSAELDEFIYHEALVHPAMLAHPDPKTVYIGGGGELATAREVLRHKSLEKCVMVDLDKLVVDTSKEMLPEWGAGVTDDPRLELHYTDAHAFLKEDERTYDVIIMDIADPIEAGPGYVLYTQEFYQYATTKLSPGGILVTQSGAASVHLKHECFTVIHKTLKSVFENVAYMVADIPSFGCNWGFNLASDGDELLLAD--IRRKDPAITDEQIASRIEGELRFYDGTAHLGLFGSPKWLRAAIESEKRIMTVDEPVFMY 819
            ++++T  FGKTL+LDGKTQSA+ DE +YHE+LVHPA++AHP+PKTVYIGGGGE ATAREVL+H S+EK VMVD+D++V D  ++ LPEW  G  +DPRLE+HYTDAHAFLKE + T+DVIIMDIADPIEAGPGYVLYT+EFY+YA TKL+ GG  VTQSG  +++   ECF+ IH TLK+ F  V     DIPSFGC W FNLA++  +       IR++  A TD  + +RI   L+ YDG +HLGLFG PK +R A+++E R++TVD PVFMY
Sbjct:   56 QIIETTSFGKTLLLDGKTQSAKXDEAVYHESLVHPALIAHPNPKTVYIGGGGEFATAREVLKHPSVEKVVMVDIDEMVCDLCRKELPEWSDGCFEDPRLEVHYTDAHAFLKEYDGTFDVIIMDIADPIEAGPGYVLYTEEFYKYAVTKLNAGGFFVTQSGPGALYNWDECFSAIHSTLKTAFNTVLPYTVDIPSFGCQWAFNLATNATDAAATGVAIRQRPIAETDALVKARINKPLKHYDGLSHLGLFGVPKPIRDALDAETRVITVDNPVFMY 330
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15012.2985.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT45_ECTSI2.520e-15579.49Spermidine/spermine synthase n=1 Tax=Ectocarpus si... [more]
A0A3R7KTL5_9STRA4.170e-11561.59PABS domain-containing protein n=18 Tax=Peronospor... [more]
A0A484DTM6_BRELC4.640e-11562.09PABS domain-containing protein n=1 Tax=Bremia lact... [more]
A0A836C836_9STRA6.810e-11562.41S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A6A4DP37_9STRA1.560e-11462.82PABS domain-containing protein n=6 Tax=Phytophthor... [more]
F0WPF1_9STRA1.620e-11461.23Spermine synthase putative n=1 Tax=Albugo laibachi... [more]
A0A7S2V6Z8_9STRA2.020e-11463.14Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
M4BQE8_HYAAE3.010e-11461.87PABS domain-containing protein n=1 Tax=Hyaloperono... [more]
A0A024G9Q2_9STRA3.250e-11461.45PABS domain-containing protein n=1 Tax=Albugo cand... [more]
A0A2D4BNJ7_PYTIN4.120e-11460.73Spermidine synthase n=2 Tax=Pythium insidiosum Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15012contigH-paniculata_contig15012:120..6295 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score391.7
Seed ortholog evalue2.4e-106
Seed eggNOG ortholog2880.D7FT45
Preferred nameSPS1
KEGG koko:K18787
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006810,GO:0008150,GO:0009888,GO:0009914,GO:0009926,GO:0009987,GO:0010087,GO:0010089,GO:0010487,GO:0010817,GO:0016740,GO:0016765,GO:0016768,GO:0030154,GO:0032502,GO:0044424,GO:0044464,GO:0048759,GO:0048856,GO:0048869,GO:0051179,GO:0051234,GO:0060918,GO:0065007,GO:0065008,GO:1905177
EggNOG free text desc.spermidine synthase activity
EggNOG OGsCOG0421@1,KOG1562@2759
EC2.5.1.79
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons5
Model size1604
Cds size714
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929204.3898833-UTR-H-paniculata_contig15012:119..9011622929204.3898833-UTR-H-paniculata_contig15012:119..901Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15012 120..901 -
1691480769.0372853-UTR-H-paniculata_contig15012:119..9011691480769.0372853-UTR-H-paniculata_contig15012:119..901Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15012 120..901 -
1622929204.4670858-UTR-H-paniculata_contig15012:6187..62951622929204.4670858-UTR-H-paniculata_contig15012:6187..6295Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15012 6188..6295 -
1691480769.092428-UTR-H-paniculata_contig15012:6187..62951691480769.092428-UTR-H-paniculata_contig15012:6187..6295Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15012 6188..6295 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929204.4051685-CDS-H-paniculata_contig15012:901..10841622929204.4051685-CDS-H-paniculata_contig15012:901..1084Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15012 902..1084 -
1691480769.048638-CDS-H-paniculata_contig15012:901..10841691480769.048638-CDS-H-paniculata_contig15012:901..1084Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15012 902..1084 -
1622929204.4174376-CDS-H-paniculata_contig15012:3197..34191622929204.4174376-CDS-H-paniculata_contig15012:3197..3419Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15012 3198..3419 -
1691480769.0606318-CDS-H-paniculata_contig15012:3197..34191691480769.0606318-CDS-H-paniculata_contig15012:3197..3419Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15012 3198..3419 -
1622929204.4294899-CDS-H-paniculata_contig15012:4217..44061622929204.4294899-CDS-H-paniculata_contig15012:4217..4406Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15012 4218..4406 -
1691480769.07038-CDS-H-paniculata_contig15012:4217..44061691480769.07038-CDS-H-paniculata_contig15012:4217..4406Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15012 4218..4406 -
1622929204.4408715-CDS-H-paniculata_contig15012:5596..56891622929204.4408715-CDS-H-paniculata_contig15012:5596..5689Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15012 5597..5689 -
1691480769.0772674-CDS-H-paniculata_contig15012:5596..56891691480769.0772674-CDS-H-paniculata_contig15012:5596..5689Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15012 5597..5689 -
1622929204.4551363-CDS-H-paniculata_contig15012:6160..61871622929204.4551363-CDS-H-paniculata_contig15012:6160..6187Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15012 6161..6187 -
1691480769.0847087-CDS-H-paniculata_contig15012:6160..61871691480769.0847087-CDS-H-paniculata_contig15012:6160..6187Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15012 6161..6187 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15012.2985.1prot_H-paniculata_contig15012.2985.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig15012 902..6187 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig15012.2985.1

>prot_H-paniculata_contig15012.2985.1 ID=prot_H-paniculata_contig15012.2985.1|Name=mRNA_H-paniculata_contig15012.2985.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=238bp
MLAHPDPKTVYIGGGGELATAREVLRHKSLEKCVMVDLDKLVVDTSKEML
PEWGAGVTDDPRLELHYTDAHAFLKEDERTYDVIIMDIADPIEAGPGYVL
YTQEFYQYATTKLSPGGILVTQSGAASVHLKHECFTVIHKTLKSVFENVA
YMVADIPSFGCNWGFNLASDGDELLLADIRRKDPAITDEQIASRIEGELR
FYDGTAHLGLFGSPKWLRAAIESEKRIMTVDEPVFMY*
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mRNA from alignment at H-paniculata_contig15012:120..6295-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig15012.2985.1 ID=mRNA_H-paniculata_contig15012.2985.1|Name=mRNA_H-paniculata_contig15012.2985.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6176bp|location=Sequence derived from alignment at H-paniculata_contig15012:120..6295- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAGGTGGTGCAGACGGCTCCATTCGGGAAAACTTTGGTCCTGGACGGGAA
GACGCAGTCCGCCGAGCTTGACGAGTTCATTTACCACGAAGCGCTCGTGC
ACCCCGCCATGTTGGCGCATCCGGATCCTAAAACGGTCAGGTTTCTGCTA
CAGTTTCGCGGTGTACATGAATGAAGGTGTCTCATTCAAAGGCCTGGCAA
GACAGGTCAATAGCGACATTTCAGTTCGATAATGTCTGATAACGAGGAGG
TATCATGTCGAGTTATCTCAAAAAATCACTAGAGAAAGGTAGAGCTAGAT
ATCACTCGGTGTAGCAGCGAAGTAGAGAAGCATCGCTTGTCCTCAACGCC
AAAACAATTCGCCTGTCCCAGCAAAAACCAAGAGGATAAACGGGGCGGTA
CACGTACAGGGTCGAAGGTTGACTGTGTCAAGCTTGTAGACATGGTGAAG
AGACGAGAATGGGTGAGGGAAGGTCGAGACGTGAGAGACAGCATGAGTGC
AGACACGGGCTGTGACGGAGGACTACAGAAAACGGCGCTGATCTTTGGAC
CCTCTGCCCACCGGTGGTACCGCTGGTGTTGTCCGTTTCGCTTGTTGGAT
GGGCAGGTGTACATCGGTGGCGGGGGGGAGCTGGCGACAGCGCGAGAAGT
GTTGCGACACAAGAGCTTGGAGAAGTGCGTCATGGTCGACTTGGACAAGG
TTATTTTCCACTCGCGCACATAGGCACCTACGTTGGGGGTGCTCCATTTG
ACCGTTACATGGAACTGATTAATTTTTATCTAGTTTTATATGTGTTGCTG
TACTGCTTTACTGCTTCACTATGGTCTTCTGTTTTTACCGATATCTTTTT
TCCAAATTCTGTTGAGAGAAAAAAGGCGTAAAAAGCCGATTTGTCGATTC
TGGAGATATTATGGTTGGGTTATTACCAGTGCAACCGTTGGTGGTTGTGG
TCGCGTGTGAAAATGCAAGGTCAATTGTAGTCAGAGTCAACGTTGTTGTT
GTTGTTGTTGTTGTCGTTGTTATTTATTTTTATCATTTCATGTTGTACTC
ATGGGAATCCTTTGAGCTTTTTCTATATATTCTATTCCCAAAAAGGTTGG
GAAACCACCCCGTCCAATGGATAATAATCAAGCCATGATGTATGCGTAGG
TTCCTTCCCCCTACCCCCCAAGAAGTACGCAAGAAGATTTTTTCGCCATT
TCAACCTAGAAGAGTGGGGTGCTGGTGAACACAAGTGTGATTGTAAACGT
TGGTTTAAGTCCTGTATGGCTATCAGCGAACTCGAGGTCCGTGATCCTTG
TTCATGTGCACCAACTTTGGGATACAAGACGTGTTCCTTGTCACAACTCG
TCAGATTATTCAAAACTCGCGAGTTTGTGCAGATGGACGGGCGTTCGGGG
CCCGGAGCTCATTTGTTGTCATACAGGACCAAATCGAATTTACAAATAGA
TGTTTGTTTTCGCAAATACTTTAATCGTTTTTTTTTTTCTAGTACTTACG
ACAGGGTAAAACATTGGGAAGAAACAGAAAAATGAAATCGGGTCGGTTGA
CCTAATATATGGGAAATGACCGTGAGCATTTTTTTTTGCGCACAATGTCC
GAACGAAAGACGAGTCATGCCATGTAACGACCAATTAATTGTCTTCTCGT
GAGGCCGATTATGGTACACATGCATCTTTGGAACTATAGAAATCAATTTA
TGATATATATATATATATATATGTAATAAATAAAACACTCGAATTACAAA
TACAGTATGTATACACGCCTACTGAAATGTTCATGTGCTGCCGTTTTTTT
TAATATATATATGTATGCCGTACTAACCCTGCTATTATATATTTTCTTGG
TTTTGTATTGTACGTTTTGTGCTCTCGGGATATGAGCAGTTGGTTGTAGA
CACGTCAAAAGAGATGCTGCCGGAATGGGGGGCAGGTGTAACGGATGACC
CGCGGCTCGAGCTGCACTACACGGACGCCCATGCCTTCTTGAAGGAGGAC
GAGCGGACGTATGACGTGATAATCATGGACATCGCTGATCCGATCGAAGC
GGGTCCTGGCTACGTTCTGTACACCCAGGTAAGAGGCAATGGCGAGCTGT
AAGATATAGCCATAAGAGGACGCGCGGTTTATTGCACATATTCATATTTT
TGGCGGAGCAGCGAAGGAACGGCACGTGGCATCTTGAGATGTTGTTCCTC
CTGTACAAGGCGTAGCATGCAGTTCTAATATCCACTTGTGTATGTTTGAA
TTGATTATGTTTGTTTGAATCGATAGTAAGGATCTTCATTGGTCGACATG
CTGGTTGGCCCACGTGAGAAGTAGGGGACAGGGTGAGGGGCGCGACGGTG
AAGCACTTTGACTGCTTCACTTGTAAGCTACACGACTGGTACAGGTATCA
CATCATCACTCGGAGTGATAACTCAAGACTAATTTCGTTCAAGCACAGCT
GGCACTCTACATACCGCGTTCCTTTGTTTTTTTTCTTCGTTCTCTTGTAT
TGAACAAAATATCCACTGAACGTCTCACACTATATATATATATATTTATA
TTAACCCCCGGAAGGCTAAGTCACAAACCTCTATCCGATGGTTCCGTACC
GAAGTACGTCTACATTTCCTTTTACAGAACAGAGTTATTTGTTCCTCTTC
GGGGTAGGCGCCACCCTGGTTCGGCCGAACCAGGTAGGCAGTGTGGGGGT
TGGGGGTTGTACCCACTAAAAGACCTCTGACTAGACTTCCAGTCATGCTC
AGTTCACGAGCTACCCTACTCGTTCGTGCGTAGGTCCGTGGGTCTCACAC
TATCTTCGTATCTCTTTACCTTCCTATCGCCCACGAACACCCCCATTTGT
GTTTTGTTTTTCCCGTTCACGCAAAGGAATTTTACCAATATGCCACGACT
AAACTGTCACCAGGCGGAATTTTGGTGACACAGTCGGGTGCGGCCTCGGT
ACACCTCAAGCACGAGTGCTTCACCGTCATCCACAAGACCTTGAAATCGG
TGTTCGAGAATGTGGCCTACATGGTGGCGGACATTCCGTCTTTCGGGTGC
AACTGGGGGTTCAACTTGGCGTCCGACGGGGATGAGCTTTTGCTGGCGGT
AAGTGGGGGATCGATTGGCACGTCCGTCTGTGTGCACATGTCTTCTTTCT
CGGTGCCAACCGTGGAATTGCAGTCCTAAAGCCGTTGGTTGCCGTGAAGG
AACTCACAGATTTCTTCCCTCTTGTACTGCTGACCCGAAGTATGTTACCG
CTAGTATACGTTATTAGTTTAGCCCACACATCGCGTGGAAGTGCCAAGCA
AATCTCAAGAGGTCTATCAGACTATTGGAATATAACCAAGTAACATATAC
ACAATGTAACGAATCCGTCATATATTATAGTACATCTTGTAGCCTTCTCT
GACCCCGCTTGTTAGCACTCTTTTTTCACGCGTCGCGCCCGTCACCCCCG
TGTCCTCCATGTATGCACGTTTACCCCCCCCCCGCCCCCCTTGCTCGCTC
GCTCATTGGTTACAATTATTTTGCTGGTGATTAAATGCAAGTGCGTCCGA
TTTTATTCGGGTTGCAATTCCGCAGGCAGCATAGTTGGAAAACTAGGGCT
GTGTATCGGTAACAATCCATTTTCGATATATTGGTATATGGGTTTATTAG
TGTTACTGTTATTGTTGAGGCGTGAAAAAGATGGAAATTGACATTCCCGA
GCATTTAACGCCGTTGTAGCGTTGAAAAAGCATGCCCCTAAAAACAGATT
TAAGATAATATATCTTGGAGGTGCCGGCACTCCAAAGGGGGTGAACGTCT
GCCCTGACGTTCCCGAACGGGCCGGTAATGAACCATGCCAAAGGTATAGA
AAGAAGTCATTGTGTCTTTGTGGGCGCCTACGACGCCTGTATACACACAT
TCGGAAATTGCAGCTCCCACTGCAAGATGTACAGCGATTGTCATAATCTA
CTACAGGCAGCAGCCTGACAGCGTGAAACATAGATAGCCGATAGTGAGAG
ATAGGAAGAGAGAGAGATGGTGACGTATTACTCTCAACCATCGTGCTCTG
ATTGTATCGTGTTCTCACAGCACGGCAGCAGAAGACCACACGGTACATTC
ATGAGAGCCATCACTTTATTTTCTTCTTGCTCATTTTTCCAGTTTTGCTA
GCCCCATGCAGTGTTCACCCACCCACCCCCCCCCTCCCTTCGCCCCCTCC
TTTTGTACATCACCCCCTGCCTCCAAGAGCAGTAGACTATCAACTCCTCA
TGTTTGGAATAATTTGGCGCAGCGCCAGAAGGGTCAAGGTAGTAAATCAT
GTAGCGTGCTCCTAAACAAGCTTCAAGCCTATTTTAGTGGGTTCTCCTTG
GTTGATGTATTCCCCCCCCCTTGAAAAAAGTATACAGTATACATAGCTTA
TTTTTTTTTCCCTCTCCTGTTGACAGTATAGAGCTCTAGCAGCACAGGTC
GGACGAGCACATGCTCGTCTCAACGAGTAATTTCGTGGTGGATCATCTGG
AAAATCGATGAGAATATGCTCGACGATACATGTTGCACGGAAACTGTTAC
AGTGAAATTAAGCAGGAATCACGAGGGCGTCGTTATGGTGTCTGTGCTCG
CCTCTCCTTGAGAAACTCAACATGCTGTCTATTCGTCGGTTCTCCAGATG
ACCCCCCACGAGTTGCTCGTTGAGACAAGCATGTGCTCGTCCTACCTGTG
AGAGCTAGCTCGACAAGGGGTACGACAAGGTTTATGAAACTAGCTGTATA
TCGGGGGGCAAGCATTGAACTTGAGTGGGCTAACGTCTAGACAAAGCTTT
GCAGATGAACTGGATGTTTGTACGTCAGTCAATTGACCCTCCACGCCCCT
CTTATAAATCTAGTTTCTCTGATGAGAGCAGAGCAGAAGTTTGGAGGCAG
CCTGCATAATCATAACATGGTTACAGTGAAGCAGTTATACGAGAGTTGTA
GCTACTACAGTTCTTGGCTTACGAACGAGAATTCCTGTGGGTGAAACGGG
GTTGTTTCTGTTATTTCGAGGGTGTAGGTGGATCATGTAAACTTTAGTTC
GTGTTTTGATACAGAGCACATGCAAGCGATACGTTAATATTCCATTGTGA
AGCTTGCTGTGCTTATAGTCAATGTTGTTCCAGGTCGAAGAGGTGCGATA
AGTCCTTGTACTCTTGAACAGCCCCCCTTCATGCTTGATGATTGACTGGT
GTTTTGGGCAGGATATCCGTCGGAAGGACCCGGCAATCACTGATGAGCAA
ATTGCTTCAAGAATCGAGGGAGAACTCAGGTTCTACGATGGGACGGCACA
CCTGGGCCTGTTTGGTTCTCCCAAGTGGCTGCGGGCGGCGATAGAGTCGG
AGAAGCGTATCATGACGGTAGACGAGCCTGTGTTCATGTACTAGATGCAG
TAAAAATAAATTGCGTTTTTCCCTTGGTTTCGTTCATTTCTGTCTTTTTA
CATTTTTTCTTTTGTGTGGCTCCGGTGGCTGTGGCATGCCTTGCGGTTTT
GTGTTGTTTAGCTTGTTGTTTCTATCCCTCTCTATCTCCCCTCCCCCCCC
CCCTGTCTCTCTCTCTCTCTCTTTTCAAGGGAGCGTAAGTGTAGGCATGG
CACATTTAGTCATAGATCTTGTTTTGTTGTCTTTTTTGCTGAGTTATCTT
CTGGGGGGGGTCGATGTGTCCAACACATCCGGGGGTGCAAAGAAACCCGA
GAGGTGCCCTATGTAGGGCAAGAGCAGTATAGTGTTTCACCACTACTTGT
AGCTTTAGCGTGCTTCAACTCTGGGATAAGCGTGTTATAATTTGCTATCT
CATGGTGCTTTTTTTTTTTTTTTTTTGTGGCACGCACGTAGCACCTTTTG
TTACTTCAACCCCCCTCCCCCCCTCTATAGAGAAGCTGTGTTGCTACTTG
TAGATTCTATAATCCTCCTGTTTTATTATGCGTGGCTGCAACTCCCTATT
TATGCTCGATTTGCCTTGTATGAGATGTGGTTTCTGCATTACAGGGCCAA
AATGAGTAGTGCGCTAACCTTATCACATGGTTGACTCTAGAAAGGGGGGT
ATTGGTACGGTATTTCCATATTTTGCGATAAGGTTGTGGCGGAGGGTTTG
GGGTAGTTTGGGTGGCCCCGTCTTACTGCTGAGGTGGTTTACGTCTGCGT
GATTTCAACAGTTTTATCACGAATTG
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Coding sequence (CDS) from alignment at H-paniculata_contig15012:120..6295-

>mRNA_H-paniculata_contig15012.2985.1 ID=mRNA_H-paniculata_contig15012.2985.1|Name=mRNA_H-paniculata_contig15012.2985.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1428bp|location=Sequence derived from alignment at H-paniculata_contig15012:120..6295- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTGGCGCATCCGGATCCTAAAACGATGTTGGCGCATCCGGATCCTAA
AACGGTGTACATCGGTGGCGGGGGGGAGCTGGCGACAGCGCGAGAAGTGT
TGCGACACAAGAGCTTGGAGAAGTGCGTCATGGTCGACTTGGACAAGGTG
TACATCGGTGGCGGGGGGGAGCTGGCGACAGCGCGAGAAGTGTTGCGACA
CAAGAGCTTGGAGAAGTGCGTCATGGTCGACTTGGACAAGTTGGTTGTAG
ACACGTCAAAAGAGATGCTGCCGGAATGGGGGGCAGGTGTAACGGATGAC
CCGCGGCTCGAGCTGCACTACACGGACGCCCATGCCTTCTTGAAGGAGGA
CGAGCGGACGTATGACGTGATAATCATGGACATCGCTGATCCGATCGAAG
CGGGTCCTGGCTACGTTCTGTACACCCAGTTGGTTGTAGACACGTCAAAA
GAGATGCTGCCGGAATGGGGGGCAGGTGTAACGGATGACCCGCGGCTCGA
GCTGCACTACACGGACGCCCATGCCTTCTTGAAGGAGGACGAGCGGACGT
ATGACGTGATAATCATGGACATCGCTGATCCGATCGAAGCGGGTCCTGGC
TACGTTCTGTACACCCAGGAATTTTACCAATATGCCACGACTAAACTGTC
ACCAGGCGGAATTTTGGTGACACAGTCGGGTGCGGCCTCGGTACACCTCA
AGCACGAGTGCTTCACCGTCATCCACAAGACCTTGAAATCGGTGTTCGAG
AATGTGGCCTACATGGTGGCGGACATTCCGTCTTTCGGGTGCAACTGGGG
GTTCAACTTGGCGTCCGACGGGGATGAGCTTTTGCTGGCGGAATTTTACC
AATATGCCACGACTAAACTGTCACCAGGCGGAATTTTGGTGACACAGTCG
GGTGCGGCCTCGGTACACCTCAAGCACGAGTGCTTCACCGTCATCCACAA
GACCTTGAAATCGGTGTTCGAGAATGTGGCCTACATGGTGGCGGACATTC
CGTCTTTCGGGTGCAACTGGGGGTTCAACTTGGCGTCCGACGGGGATGAG
CTTTTGCTGGCGGATATCCGTCGGAAGGACCCGGCAATCACTGATGAGCA
AATTGCTTCAAGAATCGAGGGAGAACTCAGGTTCTACGATGGGACGGCAC
ACCTGGGCCTGTTTGGTTCTCCCAAGTGGCTGCGGGCGGCGATAGAGTCG
GAGAAGCGTATCATGACGGTAGACGAGCCTGTGTTCATGTACTAGGATAT
CCGTCGGAAGGACCCGGCAATCACTGATGAGCAAATTGCTTCAAGAATCG
AGGGAGAACTCAGGTTCTACGATGGGACGGCACACCTGGGCCTGTTTGGT
TCTCCCAAGTGGCTGCGGGCGGCGATAGAGTCGGAGAAGCGTATCATGAC
GGTAGACGAGCCTGTGTTCATGTACTAG
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