mRNA_H-paniculata_contig1501.2983.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1501.2983.1 vs. uniprot
Match: A0A6H5K1N9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1N9_9PHAE) HSP 1 Score: 111 bits (277), Expect = 4.280e-25 Identity = 72/191 (37.70%), Postives = 103/191 (53.93%), Query Frame = 1 Query: 1 YIMIIVDDHSRLQAVKFMKKKSDATAAFMRFIDEFIT---PKEIKASAVRADNGGEF-EGSFDLKLYELGIMHEYTPLDTPQYNSVAERRLGLLREKMIAL-IQGLT----ESSSEILWAEAKN*ASDVINMSVTSTNDNNITPYEKWHGKTSSLHHLVPFGTTGYMR----KISAEYKMTPRAEKCMMLG 534 Y +I+ DD++R V F+K KSDA AF R++ E P ++ VR+DNGGEF EG F + I E+TP +P+YN VAER LGL+++ IA IQ T + LWAEA + + +N + T++N +PYE WHG H P T +++ K+ +K P A+KC LG Sbjct: 387 YTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLKEKRADGAPSDVMV--VRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAAIAARIQAPTLYPGAPNYRSLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHG-----HPPPPGATYPFLKPAVYKVKRTHKSEPTAQKCFYLG 570
BLAST of mRNA_H-paniculata_contig1501.2983.1 vs. uniprot
Match: A0A6H5JTI6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI6_9PHAE) HSP 1 Score: 110 bits (276), Expect = 6.000e-25 Identity = 71/191 (37.17%), Postives = 104/191 (54.45%), Query Frame = 1 Query: 1 YIMIIVDDHSRLQAVKFMKKKSDATAAFMRFIDEFIT---PKEIKASAVRADNGGEF-EGSFDLKLYELGIMHEYTPLDTPQYNSVAERRLGLLREKMIAL-IQGLT----ESSSEILWAEAKN*ASDVINMSVTSTNDNNITPYEKWHGKTSSLHHLVPFGTTGYMR----KISAEYKMTPRAEKCMMLG 534 Y +I+ DD++R V F+K KSDA AF R++ E P ++ VR+DNGGEF EG F + I E+TP +P+YN VAER LGL+++ +A IQ T + LWAEA + + +N + T++N +PYE WHG H P T +++ K+ +K P+A+KC LG Sbjct: 754 YTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMV--VRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPSLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHG-----HPPPPGATYPFLKPAVYKVKRTHKSEPKAQKCFYLG 937
BLAST of mRNA_H-paniculata_contig1501.2983.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 110 bits (276), Expect = 6.020e-25 Identity = 71/191 (37.17%), Postives = 104/191 (54.45%), Query Frame = 1 Query: 1 YIMIIVDDHSRLQAVKFMKKKSDATAAFMRFIDEFIT---PKEIKASAVRADNGGEF-EGSFDLKLYELGIMHEYTPLDTPQYNSVAERRLGLLREKMIAL-IQGLT----ESSSEILWAEAKN*ASDVINMSVTSTNDNNITPYEKWHGKTSSLHHLVPFGTTGYMR----KISAEYKMTPRAEKCMMLG 534 Y +I+ DD++R V F+K KSDA AF R++ E P ++ VR+DNGGEF EG F + I E+TP +P+YN VAER LGL+++ +A IQ T + LWAEA + + +N + T++N +PYE WHG H P T +++ K+ +K P+A+KC LG Sbjct: 589 YTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMV--VRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPSLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHG-----HPPPPGATYPFLKPAVYKVKRTHKSEPKAQKCFYLG 772
BLAST of mRNA_H-paniculata_contig1501.2983.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 110 bits (276), Expect = 6.040e-25 Identity = 71/191 (37.17%), Postives = 104/191 (54.45%), Query Frame = 1 Query: 1 YIMIIVDDHSRLQAVKFMKKKSDATAAFMRFIDEFIT---PKEIKASAVRADNGGEF-EGSFDLKLYELGIMHEYTPLDTPQYNSVAERRLGLLREKMIAL-IQGLT----ESSSEILWAEAKN*ASDVINMSVTSTNDNNITPYEKWHGKTSSLHHLVPFGTTGYMR----KISAEYKMTPRAEKCMMLG 534 Y +I+ DD++R V F+K KSDA AF R++ E P ++ VR+DNGGEF EG F + I E+TP +P+YN VAER LGL+++ +A IQ T + LWAEA + + +N + T++N +PYE WHG H P T +++ K+ +K P+A+KC LG Sbjct: 602 YTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMV--VRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPSLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHG-----HPPPPGATYPFLKPAVYKVKRTHKSEPKAQKCFYLG 785
BLAST of mRNA_H-paniculata_contig1501.2983.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 110 bits (276), Expect = 6.070e-25 Identity = 71/191 (37.17%), Postives = 104/191 (54.45%), Query Frame = 1 Query: 1 YIMIIVDDHSRLQAVKFMKKKSDATAAFMRFIDEFIT---PKEIKASAVRADNGGEF-EGSFDLKLYELGIMHEYTPLDTPQYNSVAERRLGLLREKMIAL-IQGLT----ESSSEILWAEAKN*ASDVINMSVTSTNDNNITPYEKWHGKTSSLHHLVPFGTTGYMR----KISAEYKMTPRAEKCMMLG 534 Y +I+ DD++R V F+K KSDA AF R++ E P ++ VR+DNGGEF EG F + I E+TP +P+YN VAER LGL+++ +A IQ T + LWAEA + + +N + T++N +PYE WHG H P T +++ K+ +K P+A+KC LG Sbjct: 745 YTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMV--VRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPSLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHG-----HPPPPGATYPFLKPAVYKVKRTHKSEPKAQKCFYLG 928
BLAST of mRNA_H-paniculata_contig1501.2983.1 vs. uniprot
Match: A0A6H5JXF7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF7_9PHAE) HSP 1 Score: 107 bits (266), Expect = 1.290e-23 Identity = 70/191 (36.65%), Postives = 102/191 (53.40%), Query Frame = 1 Query: 1 YIMIIVDDHSRLQAVKFMKKKSDATAAFMRFIDEFIT---PKEIKASAVRADNGGEF-EGSFDLKLYELGIMHEYTPLDTPQYNSVAERRLGLLREKMIAL-IQGLT----ESSSEILWAEAKN*ASDVINMSVTSTNDNNITPYEKWHGKTSSLHHLVPFGTTGYMR----KISAEYKMTPRAEKCMMLG 534 Y +I+ D ++R V F+K KSDA AF R++ E P ++ VR+DNGGEF EG F + I E+TP +P+YN VAER LGL+++ +A IQ T + WAEA A + +N + T++N +PYE WHG H P T +++ K+ +K P+A+KC LG Sbjct: 615 YTLIVKDVYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMV--VRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGTPNYPSFWAEAIAWACNALNCTSTTSNPEKKSPYEMWHG-----HPPPPGATYPFLKPAVYKVKRTHKSEPKAQKCFYLG 798
BLAST of mRNA_H-paniculata_contig1501.2983.1 vs. uniprot
Match: A0A6H5K2B9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2B9_9PHAE) HSP 1 Score: 104 bits (259), Expect = 1.040e-22 Identity = 70/191 (36.65%), Postives = 103/191 (53.93%), Query Frame = 1 Query: 1 YIMIIVDDHSRLQAVKFMKKKSDATAAFMRFIDEFIT---PKEIKASAVRADNGGEF-EGSFDLKLYELGIMHEYTPLDTPQYNSVAERRLGLLRE-KMIALIQGLTESSSE----ILWAEAKN*ASDVINMSVTSTNDNNITPYEKWHGKTSSLHHLVPFGTTGYMR----KISAEYKMTPRAEKCMMLG 534 Y +I+ D ++R V F+K KSDA AF R++ E P ++ VR+DNGGEF EG F + I E+TP +P+YN VAER LGL+++ +++A I T S LWAEA + + +N + T++N +PYE WHG H +P T +++ K +K P A+KC LG Sbjct: 361 YTLIVKDGYTRWSHVYFLKHKSDAAEAFERYLAENRADGAPSDVMV--VRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERVLGLIKDAELVARIHAPTLYSGPPNYPSLWAEAIAWSCNSLNCTSTTSNPEKKSPYEIWHG-----HPPLPGATYPFLKPAVYKDKGTHKSEPTAQKCFYLG 544
BLAST of mRNA_H-paniculata_contig1501.2983.1 vs. uniprot
Match: A0A6A3JY23_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JY23_9STRA) HSP 1 Score: 100 bits (248), Expect = 3.250e-21 Identity = 66/180 (36.67%), Postives = 93/180 (51.67%), Query Frame = 1 Query: 1 YIMIIVDDHSRLQAVKFMKKKSDATAAFMRFIDEFITPKEIKASAVRADNGGEFEGSFDLK-LYELGIMHEYTPLDTPQYNSVAERRLGLLREKMIALIQGLTESSSEILWAEAKN*ASDVINMSVTSTNDNNITPYEKWHGKTSSLHHLVPFGTTGYMR-KISAEYKMTPRAEKCMMLG 534 YI+++VDD SR+ V F+KKKS+A F+ F E E + +R DNGGE+ K L + GI H+ T TPQ N + ER + E L+ S WAEA N A +IN + S N N+T YE W+GK +L ++ FG+TG+ K+ ++ KC LG Sbjct: 124 YILVLVDDFSRMLWVYFLKKKSEALDKFIEFKAEAENLSEKRVQELRTDNGGEYTSKVFAKYLKDHGIRHQKTVAYTPQQNGLVERANRTIVEMARCLLYH--RSMHLRWWAEAVNTAVFIINRTPNSVN--NVTAYEIWYGKRPNLKNVKSFGSTGFAHIPKEKRKKLDAKSFKCKFLG 299
BLAST of mRNA_H-paniculata_contig1501.2983.1 vs. uniprot
Match: A0A6A3JVQ8_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JVQ8_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 5.800e-21 Identity = 66/180 (36.67%), Postives = 93/180 (51.67%), Query Frame = 1 Query: 1 YIMIIVDDHSRLQAVKFMKKKSDATAAFMRFIDEFITPKEIKASAVRADNGGEFEGSFDLK-LYELGIMHEYTPLDTPQYNSVAERRLGLLREKMIALIQGLTESSSEILWAEAKN*ASDVINMSVTSTNDNNITPYEKWHGKTSSLHHLVPFGTTGYMR-KISAEYKMTPRAEKCMMLG 534 YI+++VDD SR+ V F+KKKS+A F+ F E E + +R DNGGE+ K L + GI H+ T TPQ N + ER + E L+ S WAEA N A +IN + S N N+T YE W+GK +L ++ FG+TG+ K+ ++ KC LG Sbjct: 473 YILVLVDDFSRMLWVYFLKKKSEALDKFIEFKAEAENLSEKRVQELRTDNGGEYTSKVFAKYLKDHGIRHQKTVAYTPQQNGLVERANRTIVEMARCLLYH--RSMHLRWWAEAVNTAVFIINRTPNSVN--NVTAYEIWYGKRPNLKNVKIFGSTGFAHIPKEKRKKLDAKSFKCKFLG 648
BLAST of mRNA_H-paniculata_contig1501.2983.1 vs. uniprot
Match: A0A6A3PLU6_9STRA (Integrase catalytic domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3PLU6_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 1.340e-20 Identity = 65/180 (36.11%), Postives = 92/180 (51.11%), Query Frame = 1 Query: 1 YIMIIVDDHSRLQAVKFMKKKSDATAAFMRFIDEFITPKEIKASAVRADNGGEFEGSFDLK-LYELGIMHEYTPLDTPQYNSVAERRLGLLREKMIALIQGLTESSSEILWAEAKN*ASDVINMSVTSTNDNNITPYEKWHGKTSSLHHLVPFGTTGYMR-KISAEYKMTPRAEKCMMLG 534 YI+++VDD SR+ V F+KKKS+A F+ F E + +R DNGGE+ K L + GI H+ T TPQ N + ER + E L+ S WAEA N A +IN + S N N+T YE W+GK +L ++ FG+TG+ K+ ++ KC LG Sbjct: 124 YILVLVDDFSRMLWVYFLKKKSEALDKFIEFKAEAENLSGKRVQELRTDNGGEYTSKVFAKYLKDHGIRHQKTVAYTPQQNGLVERANRTIVEMTRCLLYH--RSMHLRWWAEAVNTAVFIINRTPNSVN--NVTAYEIWYGKRPNLKNVKIFGSTGFAHIPKEKRKKLDAKSFKCKFLG 299 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1501.2983.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1501.2983.1 >prot_H-paniculata_contig1501.2983.1 ID=prot_H-paniculata_contig1501.2983.1|Name=mRNA_H-paniculata_contig1501.2983.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=114bp MIIVDDHSRLQAVKFMKKKSDATAAFMRFIDEFITPKEIKASAVRADNGGback to top mRNA from alignment at H-paniculata_contig1501:16508..17041- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1501.2983.1 ID=mRNA_H-paniculata_contig1501.2983.1|Name=mRNA_H-paniculata_contig1501.2983.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=534bp|location=Sequence derived from alignment at H-paniculata_contig1501:16508..17041- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1501:16508..17041- >mRNA_H-paniculata_contig1501.2983.1 ID=mRNA_H-paniculata_contig1501.2983.1|Name=mRNA_H-paniculata_contig1501.2983.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=684bp|location=Sequence derived from alignment at H-paniculata_contig1501:16508..17041- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |