mRNA_H-paniculata_contig1501.2981.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1501.2981.1
Unique NamemRNA_H-paniculata_contig1501.2981.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig1501.2981.1 vs. uniprot
Match: A0A6H5KAF1_9PHAE (14_3_3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KAF1_9PHAE)

HSP 1 Score: 332 bits (851), Expect = 3.760e-110
Identity = 169/214 (78.97%), Postives = 190/214 (88.79%), Query Frame = 3 
Query:  285 FDEMLVYMKEVAVCPKELTIDERSLLSVAYKNTIGARRASWRVISSIEQKAEPEKLKLVGEYRRKIEEELEHICAEIITIIHENLIPNSKSNESKVFYHKMAGDYHRYLAEFQQGNARIKSKDKALQAYQDATTSARDDMPPTHPIRLGLALNFSVFYFEILNSPERACSLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSEDLP 926
            FDEM+  MK VAV P+EL+++ER+LLSVAYKN IG+RRASWRVISSIEQK E +KLKL+GEY+ KIE+ELE IC +I+TII ENL+PNS++NE+KVF++KM GDYHRYL EFQQG AR  S +KALQAYQ ATT    DM PTHPIRLGLALNFSVFYFEILNSPERACSLAK+AFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSED P
Sbjct:   21 FDEMVENMKAVAVRPEELSMEERNLLSVAYKNVIGSRRASWRVISSIEQKGEADKLKLIGEYKAKIEKELETICGDILTIIDENLLPNSQTNEAKVFFYKMQGDYHRYLTEFQQGEAREGSAEKALQAYQSATTLTNQDMAPTHPIRLGLALNFSVFYFEILNSPERACSLAKKAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSEDAP 234
[Close]
BLAST of mRNA_H-paniculata_contig1501.2981.1 vs. uniprot
Match: A0A835YSI6_9STRA (14-3-3-like protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSI6_9STRA)

HSP 1 Score: 320 bits (820), Expect = 2.060e-105
Identity = 163/220 (74.09%), Postives = 190/220 (86.36%), Query Frame = 3 
Query:  285 FDEMLVYMKEVAVCPKELTIDERSLLSVAYKNTIGARRASWRVISSIEQKAEPEKLKLVGEYRRKIEEELEHICAEIITIIHENLIPNSKSNESKVFYHKMAGDYHRYLAEFQQGNARIKSKDKALQAYQDATTSARDDMPPTHPIRLGLALNFSVFYFEILNSPERACSLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSEDLPDGDGDD 944
            FDEM+ +MK+V+V P+EL+++ER+LLSVAYKN IGARRASWRVISSIEQK EPEKL L+ +Y++KIE ELE IC EI+ II   LIPNS + E KVFY+KM GDYHRYL+EFQ  +AR +S DKAL+AYQ AT  +  D+PPTHPIRLGLALNFSVFY+EILNSPERAC+LAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS+    G+GD+
Sbjct:   19 FDEMVSFMKQVSVQPQELSVEERNLLSVAYKNVIGARRASWRVISSIEQKGEPEKLPLIRDYKKKIETELEEICTEILGIIENELIPNSSATEGKVFYYKMKGDYHRYLSEFQAHDARKESSDKALEAYQHATEWSHQDLPPTHPIRLGLALNFSVFYYEILNSPERACNLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQ---GEGDE 235
[Close]
BLAST of mRNA_H-paniculata_contig1501.2981.1 vs. uniprot
Match: B8BX06_THAPS (14-3-3-like protein n=3 Tax=Thalassiosirales TaxID=33847 RepID=B8BX06_THAPS)

HSP 1 Score: 304 bits (778), Expect = 4.360e-99
Identity = 153/217 (70.51%), Postives = 182/217 (83.87%), Query Frame = 3 
Query:  285 FDEMLVYMKEVAVCPKELTIDERSLLSVAYKNTIGARRASWRVISSIEQKAEPEKLKLVGEYRRKIEEELEHICAEIITIIHENLIPNSKSNESKVFYHKMAGDYHRYLAEFQQGNARIKSKDKALQAYQDATTSARDDMPPTHPIRLGLALNFSVFYFEILNSPERACSLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSEDLPDGD 935
            FDEM+  MKEVA  P+ELT++ER+LLSVAYKN IG+RRASWRV++SIEQK + +K+ ++ +Y+ KIE EL  IC +I++II E+LIPNS S E+KVFY+KM GDYHRYL+EFQQG+ R  S   AL AYQ AT  A  D+PPTHPIRLGLALNFSVFY+EILNSP+RAC +AKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS+   D +
Sbjct:   19 FDEMVSDMKEVARQPQELTVEERNLLSVAYKNVIGSRRASWRVVTSIEQKGDADKMSIIKDYKAKIENELCDICNDILSIIEESLIPNSTSEEAKVFYYKMKGDYHRYLSEFQQGDVRKASASAALDAYQSATEVASSDLPPTHPIRLGLALNFSVFYYEILNSPDRACHIAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQAADAE 235
[Close]
BLAST of mRNA_H-paniculata_contig1501.2981.1 vs. uniprot
Match: A0A7S1ZMH4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZMH4_TRICV)

HSP 1 Score: 304 bits (778), Expect = 6.130e-99
Identity = 153/218 (70.18%), Postives = 182/218 (83.49%), Query Frame = 3 
Query:  285 FDEMLVYMKEVAVCPKELTIDERSLLSVAYKNTIGARRASWRVISSIEQKAEPEKLKLVGEYRRKIEEELEHICAEIITIIHENLIPNSKSNESKVFYHKMAGDYHRYLAEFQQGNARIKSKDKALQAYQDATTSARDDMPPTHPIRLGLALNFSVFYFEILNSPERACSLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSEDLPDGDG 938
            FD+M+  MKEVA  P+ELT++ER+LLSVAYKN IG+RRASWRV++SIEQK +PEKL  + +Y+ KIE EL  +C +I+ II  +LIPNS S E+KVFY+KM GDYHRYL+EFQ G AR +S   AL AYQ A+  A  D+PPTHPIRLGLALNFSVFY+EILNSP+RAC +AKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS++  + DG
Sbjct:   32 FDDMVADMKEVAQQPQELTVEERNLLSVAYKNVIGSRRASWRVVTSIEQKGDPEKLPTIKDYKAKIEGELVQVCGDILGIIESSLIPNSSSEEAKVFYYKMKGDYHRYLSEFQTGTARKESASAALDAYQAASGVASADLPPTHPIRLGLALNFSVFYYEILNSPDRACHIAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDNAGEADG 249
[Close]
BLAST of mRNA_H-paniculata_contig1501.2981.1 vs. uniprot
Match: A0A7S1GIM8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GIM8_CYCTE)

HSP 1 Score: 303 bits (775), Expect = 1.370e-98
Identity = 152/217 (70.05%), Postives = 182/217 (83.87%), Query Frame = 3 
Query:  285 FDEMLVYMKEVAVCPKELTIDERSLLSVAYKNTIGARRASWRVISSIEQKAEPEKLKLVGEYRRKIEEELEHICAEIITIIHENLIPNSKSNESKVFYHKMAGDYHRYLAEFQQGNARIKSKDKALQAYQDATTSARDDMPPTHPIRLGLALNFSVFYFEILNSPERACSLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSEDLPDGD 935
            FDEM+  MKEVA  P+ELT++ER+LLSVAYKN IG+RRASWRV++SIEQK EP+K+ ++ +Y+ KIE EL  IC +I+ II E+LIPNS S E+KVFY+KM GDYHRYL+EFQ G+AR  S   AL AYQ A+  A  D+PPTHPIRLGLALNFSVFY+EILNSP++AC +AKQAFDDAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS+   + D
Sbjct:   24 FDEMVTDMKEVAKQPQELTVEERNLLSVAYKNVIGSRRASWRVVTSIEQKGEPDKMTIIKDYKAKIESELVEICNDILGIIDESLIPNSTSEEAKVFYYKMKGDYHRYLSEFQIGDARKSSASSALDAYQAASGIASSDLPPTHPIRLGLALNFSVFYYEILNSPDQACQIAKQAFDDAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSDQTAEAD 240
[Close]
BLAST of mRNA_H-paniculata_contig1501.2981.1 vs. uniprot
Match: A0A7S2Y7Y6_9STRA (Hypothetical protein n=3 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y7Y6_9STRA)

HSP 1 Score: 302 bits (773), Expect = 2.100e-98
Identity = 152/221 (68.78%), Postives = 184/221 (83.26%), Query Frame = 3 
Query:  285 FDEMLVYMKEVAVCPKELTIDERSLLSVAYKNTIGARRASWRVISSIEQKAEPEKLKLVGEYRRKIEEELEHICAEIITIIHENLIPNSKSNESKVFYHKMAGDYHRYLAEFQQGNARIKSKDKALQAYQDATTSARDDMPPTHPIRLGLALNFSVFYFEILNSPERACSLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSEDLPDGDGDDG 947
            FDEM+  MKEVA  P+EL+++ER+LLSVAYKN IG+RRASWRV++SIEQK +PEK  ++ EY+ KIE EL  IC +I++II ++LIPNSKS E+KVFY+KM GDYHRYL+EFQ G  R  S   AL AYQDA+  A  ++PPTHPIRLGLALNFSVFY+EILNSP++AC +AKQAFDDAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS+   D   ++G
Sbjct:   21 FDEMVKDMKEVAKAPQELSVEERNLLSVAYKNVIGSRRASWRVVTSIEQKGDPEKSDVIKEYKEKIENELIEICNDILSIIADSLIPNSKSEEAKVFYYKMKGDYHRYLSEFQVGETRKSSASGALDAYQDASDIAGKELPPTHPIRLGLALNFSVFYYEILNSPDKACQIAKQAFDDAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSDQNEDAAPEEG 241
[Close]
BLAST of mRNA_H-paniculata_contig1501.2981.1 vs. uniprot
Match: A0A7S0GLL5_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GLL5_9STRA)

HSP 1 Score: 302 bits (774), Expect = 3.350e-98
Identity = 152/226 (67.26%), Postives = 188/226 (83.19%), Query Frame = 3 
Query:  285 FDEMLVYMKEVAVCPKELTIDERSLLSVAYKNTIGARRASWRVISSIEQKAEPEKLKLVGEYRRKIEEELEHICAEIITIIHENLIPNSKSNESKVFYHKMAGDYHRYLAEFQQGNARIKSKDKALQAYQDATTSARDDMPPTHPIRLGLALNFSVFYFEILNSPERACSLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSEDLPDGDGDDGHDDRT 962
            FDEM+  MK+VA  P+ELT++ER+LLSVAYKN IG+RRASWRV++SIEQK + +K+ ++ +Y+ KIEEEL +IC +I++II ++LIPNS S E+KVFY+KM GDYHRYL+EFQQ   R +S   AL AYQ A+T A  D+PPTHPIRLGLALNFSVFY+EILNSP++AC +AK+AFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS+   + DG    D+ T
Sbjct:   35 FDEMVSDMKDVARQPQELTVEERNLLSVAYKNVIGSRRASWRVVTSIEQKGDADKMTIIRDYKNKIEEELVNICNDILSIIEDSLIPNSSSQEAKVFYYKMKGDYHRYLSEFQQAETRKESASNALDAYQAASTIATADLPPTHPIRLGLALNFSVFYYEILNSPDKACEIAKKAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTGAENDGAPPSDEAT 260
[Close]
BLAST of mRNA_H-paniculata_contig1501.2981.1 vs. uniprot
Match: A0A7S1H1R2_9STRA (Hypothetical protein n=2 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H1R2_9STRA)

HSP 1 Score: 301 bits (771), Expect = 8.300e-98
Identity = 152/215 (70.70%), Postives = 182/215 (84.65%), Query Frame = 3 
Query:  285 FDEMLVYMKEVAVCPKELTIDERSLLSVAYKNTIGARRASWRVISSIEQKAEPEKLKLVGEYRRKIEEELEHICAEIITIIHENLIPNSKSNESKVFYHKMAGDYHRYLAEFQQGNARIKSKDKALQAYQDATTSARDDMPPTHPIRLGLALNFSVFYFEILNSPERACSLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSEDLPD 929
            FDEM+  MKEVA  P+ELT++ER+LLSVAYKN IGARRASWRV++SIEQK EP+KL  + +Y+ KIE EL  IC +I++II E+LI NS S E+KVFY+KM GDYHRYL+EFQ G++R +S   AL AYQ A+  A  D+PPTHPIRLGLALNFSVFY+EILNSP++AC++AKQAFDDAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS+   D
Sbjct:   36 FDEMVTDMKEVARQPQELTVEERNLLSVAYKNVIGARRASWRVVTSIEQKGEPDKLPTIKDYKAKIENELVDICNDILSIIEESLIRNSTSEEAKVFYYKMKGDYHRYLSEFQAGDSRKESATSALDAYQAASRIASSDLPPTHPIRLGLALNFSVFYYEILNSPDKACNIAKQAFDDAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSDQAAD 250
[Close]
BLAST of mRNA_H-paniculata_contig1501.2981.1 vs. uniprot
Match: A0A7S1CZ22_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZ22_CYCTE)

HSP 1 Score: 300 bits (769), Expect = 1.000e-97
Identity = 153/216 (70.83%), Postives = 182/216 (84.26%), Query Frame = 3 
Query:  285 FDEMLVYMKEVAVCPKELTIDERSLLSVAYKNTIGARRASWRVISSIEQKAEPEKLKLVGEYRRKIEEELEHICAEIITIIHENLIPNSKSNESKVFYHKMAGDYHRYLAEFQQGNARIKSKDKALQAYQDATTSARDDMPPTHPIRLGLALNFSVFYFEILNSPERACSLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSEDLPDG 932
            F+EM+  MKEVA  P+ELT++ER+LLSVAYKN IGARRASWRV++SIEQKAE +K+ ++ +Y+ KIE EL  IC +I+ II E+LIPNS S E+KVFY KM GDYHRYL+EFQ G+AR  S   AL AY+ A+  A  D+PPTHPIRLGLALNFSVFY+EILNSP+RACS+AKQAFDDAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS+   +G
Sbjct:   20 FEEMVSDMKEVAKQPQELTVEERNLLSVAYKNVIGARRASWRVVTSIEQKAEQDKIPVIKDYKTKIERELIEICNDILGIIEESLIPNSTSEEAKVFYFKMKGDYHRYLSEFQVGDARKASASSALDAYRAASGIASSDLPPTHPIRLGLALNFSVFYYEILNSPDRACSIAKQAFDDAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSDQAAEG 235
[Close]
BLAST of mRNA_H-paniculata_contig1501.2981.1 vs. uniprot
Match: A0A7S2I2S0_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I2S0_9STRA)

HSP 1 Score: 299 bits (766), Expect = 3.150e-97
Identity = 151/218 (69.27%), Postives = 184/218 (84.40%), Query Frame = 3 
Query:  285 FDEMLVYMKEVAVCPKELTIDERSLLSVAYKNTIGARRASWRVISSIEQKAEPEKLKLVGEYRRKIEEELEHICAEIITIIHENLIPNSKSNESKVFYHKMAGDYHRYLAEFQQGNARIKSKDKALQAYQDATTSARDDMPPTHPIRLGLALNFSVFYFEILNSPERACSLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSEDLPDGDG 938
            FDEM+  MKEVA  P+ELT++ER+LLSVAYKN IG+RRASWRVISSIEQK + +K++++ +Y+ KIE EL  IC +I+ II E L+PNS + E++VFY+KM GDYHRYL+EFQQG+AR  S   AL AYQ A+  A  D+PPTHPIRLGLALNFSVFY+EILNSP+RAC +AKQAFDDAIAELDTL++ESYKDSTLIMQLLRDNLTLWTS+   +G+G
Sbjct:   19 FDEMVSDMKEVARQPQELTVEERNLLSVAYKNVIGSRRASWRVISSIEQKGDSDKMQIIKDYKSKIESELVDICNDILGIIEECLVPNSTTEEAEVFYYKMKGDYHRYLSEFQQGSARKASASAALDAYQAASGIASSDLPPTHPIRLGLALNFSVFYYEILNSPDRACHIAKQAFDDAIAELDTLNKESYKDSTLIMQLLRDNLTLWTSDTQAEGEG 236
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1501.2981.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KAF1_9PHAE3.760e-11078.9714_3_3 domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A835YSI6_9STRA2.060e-10574.0914-3-3-like protein n=2 Tax=Tribonema minus TaxID=... [more]
B8BX06_THAPS4.360e-9970.5114-3-3-like protein n=3 Tax=Thalassiosirales TaxID... [more]
A0A7S1ZMH4_TRICV6.130e-9970.18Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S1GIM8_CYCTE1.370e-9870.05Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S2Y7Y6_9STRA2.100e-9868.78Hypothetical protein n=3 Tax=Amphiprora paludosa T... [more]
A0A7S0GLL5_9STRA3.350e-9867.26Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S1H1R2_9STRA8.300e-9870.70Hypothetical protein n=2 Tax=Thalassionema nitzsch... [more]
A0A7S1CZ22_CYCTE1.000e-9770.83Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S2I2S0_9STRA3.150e-9769.27Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1501contigH-paniculata_contig1501:8012..14341 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score327.0
Seed ortholog evalue6.9e-87
Seed eggNOG ortholog2880.D7G305
KEGG koko:K06630
KEGG Pathwayko04011,ko04110,ko04114,ko04151,ko04390,ko04391,ko04722,ko05169,ko05203,map04011,map04110,map04114,map04151,map04390,map04391,map04722,map05169,map05203
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0031410,GO:0031982,GO:0042470,GO:0043226,GO:0043227,GO:0043229,GO:0044424,GO:0044444,GO:0044464,GO:0048770,GO:0097708
EggNOG free text desc.protein domain specific binding
EggNOG OGsCOG5040@1,KOG0841@2759
Ec32 ortholog description14-3-3 domain
Ec32 orthologEc-09_004190.1
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03400,ko04147
Exons6
Model size1208
Cds size684
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1501.2981.1prot_H-paniculata_contig1501.2981.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1501 8255..14060 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929203.9680777-UTR-H-paniculata_contig1501:8011..82541622929203.9680777-UTR-H-paniculata_contig1501:8011..8254Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1501 8012..8254 -
1691480768.8678858-UTR-H-paniculata_contig1501:8011..82541691480768.8678858-UTR-H-paniculata_contig1501:8011..8254Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1501 8012..8254 -
1622929204.0699074-UTR-H-paniculata_contig1501:14060..143411622929204.0699074-UTR-H-paniculata_contig1501:14060..14341Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1501 14061..14341 -
1691480768.9339707-UTR-H-paniculata_contig1501:14060..143411691480768.9339707-UTR-H-paniculata_contig1501:14060..14341Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1501 14061..14341 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929203.9832942-CDS-H-paniculata_contig1501:8254..83381622929203.9832942-CDS-H-paniculata_contig1501:8254..8338Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1501 8255..8338 -
1691480768.8798091-CDS-H-paniculata_contig1501:8254..83381691480768.8798091-CDS-H-paniculata_contig1501:8254..8338Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1501 8255..8338 -
1622929203.9977756-CDS-H-paniculata_contig1501:9370..94451622929203.9977756-CDS-H-paniculata_contig1501:9370..9445Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1501 9371..9445 -
1691480768.891071-CDS-H-paniculata_contig1501:9370..94451691480768.891071-CDS-H-paniculata_contig1501:9370..9445Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1501 9371..9445 -
1622929204.012782-CDS-H-paniculata_contig1501:10797..110341622929204.012782-CDS-H-paniculata_contig1501:10797..11034Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1501 10798..11034 -
1691480768.8982987-CDS-H-paniculata_contig1501:10797..110341691480768.8982987-CDS-H-paniculata_contig1501:10797..11034Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1501 10798..11034 -
1622929204.0304852-CDS-H-paniculata_contig1501:12011..121401622929204.0304852-CDS-H-paniculata_contig1501:12011..12140Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1501 12012..12140 -
1691480768.9078794-CDS-H-paniculata_contig1501:12011..121401691480768.9078794-CDS-H-paniculata_contig1501:12011..12140Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1501 12012..12140 -
1622929204.0444663-CDS-H-paniculata_contig1501:12876..130331622929204.0444663-CDS-H-paniculata_contig1501:12876..13033Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1501 12877..13033 -
1691480768.9190097-CDS-H-paniculata_contig1501:12876..130331691480768.9190097-CDS-H-paniculata_contig1501:12876..13033Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1501 12877..13033 -
1622929204.0570495-CDS-H-paniculata_contig1501:14058..140601622929204.0570495-CDS-H-paniculata_contig1501:14058..14060Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1501 14059..14060 -
1691480768.9265308-CDS-H-paniculata_contig1501:14058..140601691480768.9265308-CDS-H-paniculata_contig1501:14058..14060Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1501 14059..14060 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1501.2981.1

>prot_H-paniculata_contig1501.2981.1 ID=prot_H-paniculata_contig1501.2981.1|Name=mRNA_H-paniculata_contig1501.2981.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=228bp
MFDEMLVYMKEVAVCPKELTIDERSLLSVAYKNTIGARRASWRVISSIEQ
KAEPEKLKLVGEYRRKIEEELEHICAEIITIIHENLIPNSKSNESKVFYH
KMAGDYHRYLAEFQQGNARIKSKDKALQAYQDATTSARDDMPPTHPIRLG
LALNFSVFYFEILNSPERACSLAKQAFDDAIAELDTLSEESYKDSTLIMQ
LLRDNLTLWTSEDLPDGDGDDGHDDRT*
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mRNA from alignment at H-paniculata_contig1501:8012..14341-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1501.2981.1 ID=mRNA_H-paniculata_contig1501.2981.1|Name=mRNA_H-paniculata_contig1501.2981.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6330bp|location=Sequence derived from alignment at H-paniculata_contig1501:8012..14341- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTCAAACGCCAATTCTTTACTGTGTGGTGTGTTCCGGGCTCAACGCATTT
TCTACCTCTGAAGCAGCTTCACTGCATCAAACCAAAGCTTCCGCGCATTC
GCAAATTCTCACCTCCCTATTTGCGACGTTCGTGGACAGAGTTACTATCA
CCCACCGGAGCAGTTGGCACGATGGGCGACGAGCGGGAGAGAGCACTTCA
AGTTTCCAACGCGAAGCTGGCCGAGCAGGCGGAACGGTGAGATTTCTGGG
AGGATCCTTATAAATACTACCGGAGAAACGTATGTATGCGCTGAACTTTC
CTATATATCCGGTGCCTTCCTTCTGGTTGCTGTCAACAGACAGCACCCGA
TGCGTTACTATAGAGTTCTATCTACTTGCTGCACCTCCGCTATACGCTCC
TGTGCGATACTCCTGACGCCTAGAACCCTTAGCTCGAACGTCGTCAAGCT
GTTTCGCACTTGTTGAGCGTTGGTACATTTTGCGCGCTGTGTCGTCTGTT
CTTCTTCGCCTACCTCTCTCTTACTGTGTAGTTATTTCTCTATTCAGTAA
AGCAAGCGCCACATACGCTACCGTCGTGTACTCGAAAGAAAATCACCGCC
GCGATTCAATACGCAATATCGAAGCAGTCAGGCGGTACCTACATATCGTA
TTGAATATACTGTTCATACACATACATGTTCAGCATGACATGTACAGGAA
TCTCTGGTGATCTATTCTGTCGATGTATGGGTCGTCCTAGAGCATAATAT
AGCTACGATAATAGAAGGATCGCTTTTTGAGGATGAAAATCTGCGTGGTG
CCAGGTTCTGTCTTGTCAACGCTCAATTCTTGTGTCTTTTCCTGGCTTCG
ACCTGTACGTGGAGCCGTTTGCTGGCAATTATGAACAGATGTCTGAATGT
TTCGAATCTCAACGAGCGCGTGAGCCATAGCGTAGCCACTCTTTTAGGTT
TGACCCTGTAAAAAAGAGGGAAGGCCTTGTACAATTGAACGAGACCGTAC
AGGTGTTGATCGCAAAGTCAATTGCCGATGTCACCATCAACGTCAACTCA
GTAGAGCACTGTATGTACGTGTATATGGCATGTAATATACCCACGCGGAT
ATTTCGGAAATTCGTAAAAATCATCACTTCACCAGGATCTTTTCGTATTG
AACCCTCTTTAACTGAGATGCTGATTTTGTTTACCATGCACCAGATCAGA
TAAATACAGATAGTGCCAAAATCAAAATGTTCCAGGCCAAGGAAAAAAAG
ACACACGAAGGAATGATAACCGAGAATTTCTTGGGTGCTGGATTATTGTA
TGACCAAGGTTCGATGAGATGCTTGTGTACATGAAGGAGGTGGCGGTATG
TCCAAAGGAGCTCACCATCGACGAACGCAGTCTACTTTCGGTGGCATATA
AGAATACCATTGGGGCTCGCAGAGCTAGCTGGCGCGTGATCAGTTCAATC
GAGCAGAAAGCAGAGGTGGGTCGTGTGGAAGGGTGTGGCACCCCAAGTTT
TTTTCTCCTTTTGTGCGATGTTCAATGTCATCAAGTGGGGGCCGGTGCGG
TTTGTTACCGTCAATGCCACGAAAGTATCGCACGCATTAATTTACTGTTG
TCAAATCCCGGTTGGAAGTGATACGTTCTTCTGCGTTCTGAAATGGAACA
GGAAACCCGACAAGGAGTCAGCGTTGTTGACCATATCCTCTAAGAGCTCA
ACCTCGCCAAAGTAAGAGGTGATTCTGCAGCAATGCGGTCACGATTATTC
GCTTTGCTCTATCGCCTACGTGAAGTTGTGGTATTCCTTCAACCTTATCT
GGGGCAACGTAGCGCAAGGGAAAGAGCCCTGATCCTCAATTTCTTGAGCT
CTGAACCATCAATCAATCCGGCCAATTCGCCCCTCTTTGGCGTTTACTCT
CTTTGTCCAATATCCGTTCACTCGAAGCTATTACCGACGCTCAGTGCATA
CGAACTACAAGGTACAGCATAATTACTCTTCGGTAAGAACTAGTACTCTA
CTGCACAGGTGTAAAATTCACCCGTTTTCATGTTTATGCACCATGCCAAT
ACGGTAGAGGACCACTTCCGCCTTCTGCACGTGCTCGCTTTGTACAAGTG
CACTCAGGCTATACCCTTCCTGAATATTCGCGCTGGATAATCTTGTGTTC
ATTGCGGGTATCTTTCACCGGAACCTGTGTTTAATGCCGCAAAAATTGCA
GCCGGAAAAGCTTAAGCTTGTCGGGGAGTACAGGCGAAAGATCGAGGAGG
AGCTTGAACACATCTGTGCTGAGATCATCACCATTATTCACGAGAACCTC
ATTCCCAACAGCAAGTCTAACGAGTCTAAGGTAAGCTAGACGTTGGAGCG
TGTTTATACAGAACTGAGAGAGATGCCCACATGTTTGCTTCAGCGCAACT
TCGTACAGCACAGGACCACCGTGACTCGTGCTGTGTGCATTTAGAAGGAT
ACTCTAGGATATCGCTGTACTGTAGCGTTTCCTGTCCAACGACGCCCTTG
GGATGCTATCAGCATGCCTCGAGTATCAGAGGTAAAGTAGGACTCCAATT
CATAGCCCGAAAACGTTTCCCCACACCACAACCCATCAGTGTCTTGAAGT
GCTAATGAATTGCATTTACATGGCTACTCTTAATAGACTGTACCGCACCA
TGCACTACTCACGCAATACGTATGGCAATAATATGTACATGAGATGCGCG
AGTCAACCGTTAACGTTCGTGGATGTATTTCTACATGCTTGAAGTTGCTT
GCTCATTGCGCTGCTCACGACGTTGATGATTGACAAATGTCGCGTGTCCA
GCTACAATGGACACCTGTTGGATGAGCTGCTATGATTGTTAGCGCAACCC
ACAGGTAGATTCCACCTACCGCAGATTGATTTGCAGGCCGTACAGCCGTA
GCTCTGTGACCTGTAGTATTCACCTCGCGTTCGGACATCCCATGGAGTGC
ACAGTTTACCCAGACGGCAGCAGCATTCCCAAGATATTTTGTTTTGGTAC
CGTCCCCGAAAGGTTTACACTAGTAATATGAAGAATATTTTTCAAGTGTT
GAGTCACCGAGTCACGGTGTGATGTGACCTTGACCGCCCTTTTTCCACAG
CGAATACTCCCCCAACACCGGATACGTCGGCAGACCAAGCGTCGGAGATG
TTGGGGTGCCAGACAGTATTGTGTTAGGGGGGTAAATTGATTGGAAAACG
GAAATTTCGGAACGAATTCAAACATATGCTTTCCTCTTCTTTTTGGATTG
CAGCAAGCTGATTGTCTCTTACGCTCGAGACATTGGTGTGTTTCCCAATA
ATGCAAGGTGTTCTACCACAAGATGGCGGGGGACTATCACCGATACCTTG
CTGAATTCCAACAGGGCAATGCGCGCATCAAATCCAAAGACAAGGCTCTC
CAGGCCTACCAGGATGCCACGACTTCCGCGAGGGATGACATGCCACCGAC
ACACCCCATCCGCCTAGGTTTGGCGCTGAACTTCTCCGTGTTCTACTTTG
AGATTCTCAATTCGCCAGAGCGGGCATGCAGCCTGGCAAAGCAGGTTTGA
CTTTGAGCTTAGGGGGTGTGTTAACTTCAACAGTGAGAAGTGTTTTTGAA
GTGAGTAATTTTCCAGAACTCATGCAAGTGTATGCGCACTTCTGATTGGC
GCAATTTCCATGGGCAGAAAGCGGACCCCTTGACAACTACTTTTGCTTCT
ATAGCAATTTTTGGATCTATTGGTAAGGAAAAGTGGAAACCAACCTTGAA
TGAGGAAATTTTGTGAGCGTGAACGGGAACATACCGGGTTTATGGTTGCG
TAGGAGCGATAAAAAGACTGTGCAGTGAAAGGCGTAATTAGTTCTTTGGT
TGTGATTCCATTGTATGCATCCACTTCCGACTCCTCTACGCCCACGTGTA
TGAATATTACCTGCTCGTTTGCTCTTGTCGGACCCAAAAAATAAAGATAA
GTGAGCGAGGCGAGCCACCTCACTTTCGAAAATAACTCATCAATTTTACA
TTTAGGACACCCCTTTACTGTCTTGGATTTCGAGAGCGTTCAGAAACGTT
CTGAATTTCGAGTTTTACACGAAATGGTGTTGCGTCAATATTTGGTATTC
GAGGCCATGCCCTGATAATGGAAGGACCACGTCTCTTGTGTGTCAACTGC
AAAATCATTTGATAGTCGTGTCGTTAATTCAACCATGGGGAGACACTTGG
TTCAAATCAAAAACGCCATTCTCTTGGTCCTTGCTGCGCTATTCTATCTA
TTTTCACACACGTGGCCAGAGGGGTGCCTTGATGTGGATGTTGCAATGTC
CACGCTGTGGTGAGGCTGGCAATCTTTACATAACATATTAGGACGTTGTG
GTGAGGCTTACAACGTATATCAAGCGTTTGCATATGCTCTATGCACAGTC
AACCTCACCGCAACATGGGGACGTTTTACTATCAGCAACAAGGTACTCAC
AAGGACACTCTGGCCACGTGTGCAACATAGCAAGTAGTATCTACGGCGTA
CGGAATCATCCCGACAAACTATATTCGGACAGCAAGAGGTCCTCAAGTTT
ACTCTGTCGGTATGCAGATGTCGTATCCTCGCGGCTGTCCTTTAACAGCC
GAAACCACCTTTCAGGACATAATGTACATTTCCCGCACACGGTGGTCTGC
CCGCAGAAATTTCCAAGTTCTTCGTGTATTCGCAGCGGAAGCTACCTTAA
CACCTGTAGCCATTGTCGCTCCTGTGATGTTATAAAACTTTTTTCCAGTT
TCGAGAAAGGATGAATTTATTCCCCAAGCTCATTGCATTTGGGGGAAAAT
GTAACAAATATTATTCCATTTCCGCCGACCATGGCGATTTACGCCCTATT
TATAGACCGAGTACAAACCATCCGTTCGACTCCATCATGTGTGCAGGCGT
TTGATGATGCCATCGCTGAGTTGGACACGCTATCGGAAGAGTCGTACAAG
GACTCCACGCTAATCATGCAGGTACCTCTTGTAGAAACATAGTAACGTGT
ACTTACGTCAAGTAGTATATACGCGATTTCTCTGTGGCGATCGTAATGAA
CGGGTAGTAAGAGCTGTTCTAAACGAGGCCTATTTTTTGTCTGATTTTGT
CTGATTTTTCCGTGTTCCGAAAATCGGAAATCGCGATAGCGAGCTGAACA
AATCGGCGACTGTGTCCAACGTGCACCAGATGTATGAGGGCAACATGCTG
TAGAGTATTTCACACATCCAACGACTAATCAGACGCTGGTATCCCCTAAG
ACAAAAAAAAATCTCGAGACCCGACAGAAGCCGAACAAGGGATCAGCTGT
GACATCAAAACATAATGCACGCGCAGTCGAACAGTGTACGAAATAAGTTG
GACAGGAGAAACAGGGAGCTTTGTTTTTCTATTCGGATTGTAGAGTCATA
CGTCGTTCCAAACGACTAACAAGTCATTGGATGTGTCGAGCGTTTCGGCA
CCTATTGCGATTTCCCTTTCTCGGAAACGGATAAATCGGACAGATAAGAC
AAAAAAATGGTCTCGTCTAAAACGGCCCCAAGTTTAGCATGCGGCAATGA
AATTTTGGCGTTACGACGAACGATCGATTGCGTTCTCCTCCTGGAGCAGA
GGACTTGAAGAACGCCATCATCGTGGGGGGTCGGTCATTGATGAAATGGT
TGGCTATTCTATAGCCATACACACCAATTTGACGTTTACCAGGGGGTGCA
AGCATCCTAGGTAACTTGGAAACGGTCGCAAAAAGAACAGCAAACGAACA
TGTCCGTTTTCTCCAACAAACCTGTATCATCACGAGTTTCCAGCTCGAGG
TGTCTGACATATCCCAGTAGTTTGTCCTTATCATCCAAGTCTCTTACCGG
TGGTTCGGGTATTGAGACCACTCACCAACAGGCTGTGATTGCAACATACA
GGAATCACAAGGTGGACTGCAGTGTATATATACCCCGACACCCCTCTCGT
TTTTTGTTCCGTTGCGTGTGGTTCCGGTTCGTCCTCGATGCTGGTAAAAA
CAGCTGTTGCGGGACAATTTAACGCTGTGGACCTCCGAGGATCTCCCGGA
CGGTGACGGAGATGATGGCCATGACGACAGAACCTAACCGTCTACGCTGG
CGTGCAAAACCCGTAATCCACGAATTTCACGCCGTTGGAATGTGCATACA
GTATATATGTATATTGTTCGAAATAGCTGTCAAATGAGTGGACATCTGCC
AACTTGTCCAGTGGCTACTTTTGAGTTCAAAGCGAAAAAGTCTCAAGAGG
CGTTGCGCACTTGTATTGTGTGCTTGTATTGTGAGCTAATCTTCTTTTCT
TTTTATTGGTGGCGCATATTTTGCTGCAGG
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Coding sequence (CDS) from alignment at H-paniculata_contig1501:8012..14341-

>mRNA_H-paniculata_contig1501.2981.1 ID=mRNA_H-paniculata_contig1501.2981.1|Name=mRNA_H-paniculata_contig1501.2981.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1368bp|location=Sequence derived from alignment at H-paniculata_contig1501:8012..14341- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATATGTTCGATGAGATGCTTGTGTACATGAAGGAGGTGGCGGTATGTCCA
AAGGAGCTCACCATCGACGAACGCAGTCTACTTTCGGTGGCATATAAGAA
TACCATTGGGGCTCGCAGAGCTAGCTGGCGCGTGATCAGTTCAATCGAGC
AGAAAGCAGAGGTTCGATGAGATGCTTGTGTACATGAAGGAGGTGGCGGT
ATGTCCAAAGGAGCTCACCATCGACGAACGCAGTCTACTTTCGGTGGCAT
ATAAGAATACCATTGGGGCTCGCAGAGCTAGCTGGCGCGTGATCAGTTCA
ATCGAGCAGAAAGCAGAGCCGGAAAAGCTTAAGCTTGTCGGGGAGTACAG
GCGAAAGATCGAGGAGGAGCTTGAACACATCTGTGCTGAGATCATCACCA
TTATTCACGAGAACCTCATTCCCAACAGCAAGTCTAACGAGTCTAAGCCG
GAAAAGCTTAAGCTTGTCGGGGAGTACAGGCGAAAGATCGAGGAGGAGCT
TGAACACATCTGTGCTGAGATCATCACCATTATTCACGAGAACCTCATTC
CCAACAGCAAGTCTAACGAGTCTAAGGTGTTCTACCACAAGATGGCGGGG
GACTATCACCGATACCTTGCTGAATTCCAACAGGGCAATGCGCGCATCAA
ATCCAAAGACAAGGCTCTCCAGGCCTACCAGGATGCCACGACTTCCGCGA
GGGATGACATGCCACCGACACACCCCATCCGCCTAGGTTTGGCGCTGAAC
TTCTCCGTGTTCTACTTTGAGATTCTCAATTCGCCAGAGCGGGCATGCAG
CCTGGCAAAGCAGGTGTTCTACCACAAGATGGCGGGGGACTATCACCGAT
ACCTTGCTGAATTCCAACAGGGCAATGCGCGCATCAAATCCAAAGACAAG
GCTCTCCAGGCCTACCAGGATGCCACGACTTCCGCGAGGGATGACATGCC
ACCGACACACCCCATCCGCCTAGGTTTGGCGCTGAACTTCTCCGTGTTCT
ACTTTGAGATTCTCAATTCGCCAGAGCGGGCATGCAGCCTGGCAAAGCAG
GCGTTTGATGATGCCATCGCTGAGTTGGACACGCTATCGGAAGAGTCGTA
CAAGGACTCCACGCTAATCATGCAGGCGTTTGATGATGCCATCGCTGAGT
TGGACACGCTATCGGAAGAGTCGTACAAGGACTCCACGCTAATCATGCAG
CTGTTGCGGGACAATTTAACGCTGTGGACCTCCGAGGATCTCCCGGACGG
TGACGGAGATGATGGCCATGACGACAGAACCTAACTGTTGCGGGACAATT
TAACGCTGTGGACCTCCGAGGATCTCCCGGACGGTGACGGAGATGATGGC
CATGACGACAGAACCTAA
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