mRNA_H-paniculata_contig15007.2980.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig15007.2980.1 vs. uniprot
Match: A0A6H5GI29_9HEMI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GI29_9HEMI) HSP 1 Score: 139 bits (351), Expect = 4.890e-32 Identity = 79/239 (33.05%), Postives = 131/239 (54.81%), Query Frame = 1 Query: 1 LIDNGVWTQMERPNNKLVVSTMMLYRRTIGEDGNVEKYKCRLVAHGNRQI*SVHFQEASSSASAVTRTKMTLSLAAIQDWELRHVDFERAYLQAPVDEEILVKIPVEYWEFPGAVGCLDKAICRLVQAGRCWSMKVTADITAKEFEQSYTDPCVFLKILDREVVAVIIIFVDDLLMSTKGPKTMDELLVDLRSDHELKGLGDAMYYLGCHKTRDRQKRKLRIDQHLYARSKAERFGISN 717 L+ N + ++ P K +S +Y+ I E +YK RLV G Q+ + FQE S + + +S+AA++DW++ H+D + AYL ++EEI V+ P + E G V L KA+ L QAGRCW+ K+T + +F +S +DPC+F++ + +V ++ ++VDD+++ + ++ L E+K LG LG + TRDR +R+L IDQ Y +RF + N Sbjct: 251 LVKNNTYEVVDLPPGKKTLSMKWVYK--IKETEGDRRYKARLVVRGCAQVPGLDFQETYSPVVKYSSLRFLMSMAAVKDWDIDHLDVKTAYLYGDLNEEIYVRPPANFSEPDGQVWRLKKAVYGLKQAGRCWNEKITEVLAQMKFHRSKSDPCIFVRNTESAIV-IVALWVDDVIVFSDNAGEKSKVKSSLAHHFEMKDLGPIHRCLGMNVTRDRARRQLSIDQTHYIEQVLKRFSMEN 486
BLAST of mRNA_H-paniculata_contig15007.2980.1 vs. uniprot
Match: A0A6H5GGZ1_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GGZ1_9HEMI) HSP 1 Score: 139 bits (351), Expect = 7.910e-32 Identity = 79/239 (33.05%), Postives = 131/239 (54.81%), Query Frame = 1 Query: 1 LIDNGVWTQMERPNNKLVVSTMMLYRRTIGEDGNVEKYKCRLVAHGNRQI*SVHFQEASSSASAVTRTKMTLSLAAIQDWELRHVDFERAYLQAPVDEEILVKIPVEYWEFPGAVGCLDKAICRLVQAGRCWSMKVTADITAKEFEQSYTDPCVFLKILDREVVAVIIIFVDDLLMSTKGPKTMDELLVDLRSDHELKGLGDAMYYLGCHKTRDRQKRKLRIDQHLYARSKAERFGISN 717 L+ N + ++ P K +S +Y+ I E +YK RLV G Q+ + FQE S + + +S+AA++DW++ H+D + AYL ++EEI V+ P + E G V L KA+ L QAGRCW+ K+T + +F +S +DPC+F++ + +V ++ ++VDD+++ + ++ L E+K LG LG + TRDR +R+L IDQ Y +RF + N Sbjct: 856 LVKNNTYEVVDLPPGKKTLSMKWVYK--IKETEGDRRYKARLVVRGCAQVPGLDFQETYSPVVKYSSLRFLMSMAAVKDWDIDHLDVKTAYLYGDLNEEIYVRPPANFSEPDGQVWRLKKAVYGLKQAGRCWNEKITEVLAQMKFHRSKSDPCIFVRNTESAIV-IVALWVDDVIVFSDNAGEKSKVKSSLAHHFEMKDLGPIHRCLGMNVTRDRARRQLSIDQTHYIEQVLKRFSMEN 1091
BLAST of mRNA_H-paniculata_contig15007.2980.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY) HSP 1 Score: 137 bits (344), Expect = 6.500e-31 Identity = 79/260 (30.38%), Postives = 135/260 (51.92%), Query Frame = 1 Query: 13 GVWTQMERPNNKLVVSTMMLYRRTIGEDGNVEKYKCRLVAHGNRQI*SVHFQEASSSASAVTRTKMTLSLAAIQDWELRHVDFERAYLQAPVDEEILVKIPVEYWEFPGAVGCLDKAICRLVQAGRCWSMKVTADITAKEFEQSYTDPCVFLKILDREVVAVIIIFVDDLLMSTKGPKTMDELLVDLRSDHELKGLGDAMYYLGCHKTRDRQKRKLRIDQHLYARSKAERFGISNTSVLPATANTMKKYYRPKTSEEAEE 792 G W + P ++ V +++R ++G V KYK RLVA G QI + F E + + + L+LA + +WE+ +D + AYL + EEI ++ P + + G + L K + L Q+GR W+ K+ ++T +++ DPCV+L V +I ++VDDLL+ T PK M+EL DL+ E+ LG+ +G RDR+ K++I Q Y S +R+ + N + + + + +EEA++ Sbjct: 937 GTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIVGIEIERDREAGKIQISQQHYIESILKRYQLENANAVGMPLDPNVAFTAEDENEEADD 1196
BLAST of mRNA_H-paniculata_contig15007.2980.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK) HSP 1 Score: 134 bits (337), Expect = 5.270e-30 Identity = 75/234 (32.05%), Postives = 128/234 (54.70%), Query Frame = 1 Query: 13 GVWTQMERPNNKLVVSTMMLYRRTIGEDGNVEKYKCRLVAHGNRQI*SVHFQEASSSASAVTRTKMTLSLAAIQDWELRHVDFERAYLQAPVDEEILVKIPVEYWEFPGAVGCLDKAICRLVQAGRCWSMKVTADITAKEFEQSYTDPCVFLKILDREVVAVIIIFVDDLLMSTKGPKTMDELLVDLRSDHELKGLGDAMYYLGCHKTRDRQKRKLRIDQHLYARSKAERFGIS 714 GV+ ++ RP ++ ++ + +++ G DG VEKYK RLVA G Q+ + + E + + ++ L+LAA DWE+ +D + A+L ++EEI +K+P + AV L KA+ L QA R W K++A++ F + D CVF K +DR +I ++VDD ++ + + + DL S ++ LG+ + L TR+RQ+R +R+ Q Y ER G++ Sbjct: 1025 GVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKKALYGLKQASREWYKKLSAELKTLGFTRLQADHCVFYKNMDRHP-PIIAVYVDDNMVLSDSLDLVTKTKSDLGSRFDMTDLGEVCWILNMEVTRNRQERTIRLSQSQYIEDILERHGMA 1257
BLAST of mRNA_H-paniculata_contig15007.2980.1 vs. uniprot
Match: A0A401GXA0_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GXA0_9APHY) HSP 1 Score: 125 bits (315), Expect = 5.730e-30 Identity = 75/226 (33.19%), Postives = 120/226 (53.10%), Query Frame = 1 Query: 13 GVWTQMERPNNKLVVSTMMLYRRTIGEDGNVEKYKCRLVAHGNRQI*SVHFQEASSSASAVTRTKMTLSLAAIQDWELRHVDFERAYLQAPVDEEILVKIPVEYWEFPGAVGCLDKAICRLVQAGRCWSMKVTADITAKEFEQSYTDPCVFLKILDREVVAVIIIFVDDLLMSTKGPKTMDELLVDLRSDHELKGLGDAMYYLGCHKTRDRQKRKLRIDQHLYARS 690 G W + P ++ V ++++ ++G V KYK RLVA G QI + F E + + + L+LA + +WE+ +D + AYL + EEI ++ P + + G V L K + L Q+G W+ K+ +T ++Q DPCV+L+ EV +I ++VDDLL+ T PK M+EL DL+ E+ LG+ +G RDR+ K++I Q Y S Sbjct: 2 GTWELQDLPKDRNAVGCKWVFQKKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVHLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFNDGSGHVCRLHKTLYGLKQSGHKWNRKLHRKLTELGYKQLEADPCVYLQEQKGEV-QIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIIGFEIERDREAGKIQILQQHYIES 226
BLAST of mRNA_H-paniculata_contig15007.2980.1 vs. uniprot
Match: A0A6G0HFF8_LARCR (Copia protein Gag-int-pol protein Copia VLP protein Copia protease n=1 Tax=Larimichthys crocea TaxID=215358 RepID=A0A6G0HFF8_LARCR) HSP 1 Score: 125 bits (313), Expect = 1.450e-27 Identity = 78/253 (30.83%), Postives = 134/253 (52.96%), Query Frame = 1 Query: 1 LIDNGVWTQMERPNNKLVVSTMMLYRRTIGEDGNVEKYKCRLVAHGNRQI*SVHFQEASSSASAVTRTKMTLSLAAIQDWELRHVDFERAYLQAPVDEEILVKIPVEYWEFPGA---VGCLDKAICRLVQAGRCWSMKVTADITAKEFEQSYTDPCVFLKILDREVVAVIIIFVDDLLMSTKGPKTMDELLVDLRSDHELKGLGDAMYYLGCHKTRDRQKRKLRIDQHLYARSKAERFGI--SNTSVLPATAN 744 L++N W +E P ++ + + +++ DG VE+YKCRLVA G Q V + E S + + LS A + + +D A+L ++EEI ++ P Y + PG V L K+I L Q+ RCWS T + F QS +DPCVF++ R+ + ++ ++VDDL++ T+ ++M EL V L+ +++K +G+ Y LG +D+ + + Q Y + +++G+ +N PA AN Sbjct: 24 LLENETWDLVELPKDRKPIGSRWVFKVKHHSDGEVERYKCRLVAKGYSQNYGVDYDETFSPVVRFSSIRTLLSFAVQNNLHVHQMDVVTAFLNGHLEEEIYMEQPDGYIK-PGQEHLVCKLKKSIYGLKQSPRCWSKTFTESMKDIGFNQSTSDPCVFVRA--RQELEILAVYVDDLILITESLESMTELKVALKKKYKMKDMGELSYILGISVIQDKTNNSVYLHQKHYIEAVLQKYGMDKANPVTTPADAN 273
BLAST of mRNA_H-paniculata_contig15007.2980.1 vs. uniprot
Match: A0A401GH23_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GH23_9APHY) HSP 1 Score: 127 bits (318), Expect = 1.580e-27 Identity = 76/257 (29.57%), Postives = 134/257 (52.14%), Query Frame = 1 Query: 19 WTQMERPNNKLVVSTMMLYRRTIGEDGNVEKYKCRLVAHGNRQI*SVHFQEASSSASAVTRTKMTLSLAAIQDWELRHVDFERAYLQAPVDEEILVKIPVEYWEFPGAVGCLDKAICRLVQAGRCWSMKVTADITAKEFEQSYTDPCVFLKILDREVVAVIIIFVDDLLMSTKGPKTMDELLVDLRSDHELKGLGDAMYYLGCHKTRDRQKRKLRIDQHLYARSKAERFGISNTSV--LPATANTMKKYYRPKTSEE 783 W +E P ++ V + + ++G + KYK RLV G QI + + E + + + L LAAI DWE+ +D + AYL + EE+ ++ P Y + V L K + L Q+GR W++ + + F++ ++DPC +++I + + ++ ++VDDLL+ T MD+L +LR+ E+ LG+ +G RDR KR ++I Q Y S + G++N + +P NT+ + P+T +E Sbjct: 1476 WELVEPPEDRKPVGNKWVLVKKTNKEGEIIKYKARLVVKGYSQIPGMDYTETFAPVVRLETIRAILGLAAILDWEIGQMDVKGAYLNGTLKEEVYMRQPEGYSDGTYRVCKLKKTLYGLKQSGREWNIVLNRKLLDAGFKRLFSDPCAYIRI-KGDKIEIVTVWVDDLLIFTNDCALMDQLKRELRNMFEVTDLGEPRKIVGIEIERDRSKRTIKISQTKYIESILHKNGLTNANTVGMPLDPNTVLEKEEPETDDE 1731
BLAST of mRNA_H-paniculata_contig15007.2980.1 vs. uniprot
Match: A0A0A9Z683_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=3 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Z683_LYGHE) HSP 1 Score: 126 bits (316), Expect = 2.580e-27 Identity = 80/271 (29.52%), Postives = 142/271 (52.40%), Query Frame = 1 Query: 4 IDNGVWTQMERPNNKLVVSTMMLYRRTIGEDGNVEKYKCRLVAHGNRQI*SVHFQEASSSASAVTRTKMTLSLAAIQDWELRHVDFERAYLQAPVDEEILVKIPVEYWEFPGAVGCLDKAICRLVQAGRCWSMKVTADITAKEFEQSYTDPCVFLKILDREVVAVIIIFVDDLLMSTKGPKTMDELLVDLRSDHELKGLGDAMYYLGCHKTRDRQKRKLRIDQHLYARSKAERFGISNTS--VLPATANT-MKKYYRPKTSEEAEEMQVFP 807 ++NG W ++ P K+ +++ ++R G + K+K RLV G Q + F+E S + + L+LAA +D ++ +D A+LQ + EEI ++ P Y E G V L K++ L QA R W++K+ + QS DPC++ K +++V V + +VDDLL+ + K E+ L ++ +G+A + LG +RDR+++K+ +DQ Y + RFG+ N + P N + K +P + +E ++M+ P Sbjct: 867 LENGTWELVDLPPGKVPLNSKWVFRTKRDVTGKIVKHKARLVVKGCAQRKGLDFEETFSPVVRYSSIRYLLALAAKRDMDIHQMDAVSAFLQGDLTEEIYMRQPEGYQE-SGKVCRLRKSLYGLKQASRVWNIKLDRSLKTIGLRQSKFDPCIYYKSSQKKMVFVAV-WVDDLLIFSDDKKLTQEVKSQLMKCFKMTDIGEAKFVLGFQISRDRERKKIWMDQRAYIDNVLIRFGMENCNPAATPLDPNIKLSKDQQPSSPDERKKMEAIP 1135
BLAST of mRNA_H-paniculata_contig15007.2980.1 vs. uniprot
Match: A0A6G0J2S8_LARCR (Copia protein Gag-int-pol protein Copia VLP protein Copia protease n=1 Tax=Larimichthys crocea TaxID=215358 RepID=A0A6G0J2S8_LARCR) HSP 1 Score: 124 bits (311), Expect = 4.210e-27 Identity = 78/253 (30.83%), Postives = 133/253 (52.57%), Query Frame = 1 Query: 1 LIDNGVWTQMERPNNKLVVSTMMLYRRTIGEDGNVEKYKCRLVAHGNRQI*SVHFQEASSSASAVTRTKMTLSLAAIQDWELRHVDFERAYLQAPVDEEILVKIPVEYWEFPGA---VGCLDKAICRLVQAGRCWSMKVTADITAKEFEQSYTDPCVFLKILDREVVAVIIIFVDDLLMSTKGPKTMDELLVDLRSDHELKGLGDAMYYLGCHKTRDRQKRKLRIDQHLYARSKAERFGI--SNTSVLPATAN 744 L++N W +E P ++ + +++ DG VE+YKCRLVA G Q V + E S + + LS A + + +D A+L ++EEI ++ P Y + PG V L K+I L Q+ RCWS T + F QS +DPCVF++ R+ + ++ ++VDDL++ T+ ++M EL V L+ +++K +G+ Y LG +D+ + + Q Y + +++G+ +N PA AN Sbjct: 163 LLENETWDLVELPKDRKPIGQRWVFKVKHHSDGEVERYKCRLVAKGYSQNYGVDYDETFSPVVRFSSIRTLLSFAVQNNLHVHQMDVVTAFLNGHLEEEIYMEQPDGYIK-PGQEHLVCKLKKSIYGLKQSPRCWSKTFTESMKDIGFNQSTSDPCVFVRA--RQELEILAVYVDDLILITESLESMTELKVALKKKYKMKDMGELSYILGISVIQDKTNNSVYLHQKHYIEAVLQKYGMDKANPVTTPADAN 412
BLAST of mRNA_H-paniculata_contig15007.2980.1 vs. uniprot
Match: A0A6H5JI74_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI74_9PHAE) HSP 1 Score: 124 bits (312), Expect = 7.230e-27 Identity = 72/245 (29.39%), Postives = 126/245 (51.43%), Query Frame = 1 Query: 13 GVWTQM-ERPNNKLVVSTMMLYRRTIGEDGNVEKYKCRLVAHGNRQI*SVHFQEASSSASAVTRTKMTLSLAAIQDWELRHVDFERAYLQAPVDEEILVKIPVEYWEFPGAVGCLDKAICRLVQAGRCWSMKVTADITAKEFEQSYTDPCVFLKILDREVVAVIIIFVDDLLMSTKGPKTMDELLVDLRSDHELKGLGDAMYYLGCHKTRDRQKRKLRIDQHLYARSKAERFGISNTSVLPATAN 744 G +T++ E P + + + ++ E G + +K R+VA G QI + F +SS+ + K +++A + +L H D ++AY+ A + EEI ++ P G V +++A+ L Q GR W + + +EQ DPCVF K++D EVV +I+I+VDD+L++ + +EL L +K LG+ +Y GC D + ++ Q Y S +RF ++ T+ PA + Sbjct: 530 GTFTKVKELPEGRKAIGSKWVFSWKTNEKGLIVDFKARMVARGFSQIPGIDFHHSSSACPSAASIKTVIAVATEKGKKLAHWDVKQAYIHAKLKEEIYLRFPEGCGSMSGKVVKVERALYGLKQGGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGER-EELFASLNKKFPVKDLGECTWYDGCAIAMDVENGITKLSQTAYIESMLKRFDVTTTAFTPAATD 773 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15007.2980.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15007.2980.1 >prot_H-paniculata_contig15007.2980.1 ID=prot_H-paniculata_contig15007.2980.1|Name=mRNA_H-paniculata_contig15007.2980.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=214bp MTLSLAAIQDWELRHVDFERAYLQAPVDEEILVKIPVEYWEFPGAVGCLDback to top mRNA from alignment at H-paniculata_contig15007:1140..2481- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15007.2980.1 ID=mRNA_H-paniculata_contig15007.2980.1|Name=mRNA_H-paniculata_contig15007.2980.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1342bp|location=Sequence derived from alignment at H-paniculata_contig15007:1140..2481- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15007:1140..2481- >mRNA_H-paniculata_contig15007.2980.1 ID=mRNA_H-paniculata_contig15007.2980.1|Name=mRNA_H-paniculata_contig15007.2980.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1284bp|location=Sequence derived from alignment at H-paniculata_contig15007:1140..2481- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |